These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13653#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 2711 fasta sequence [CTATATATCCCTTATCCTCTTATCGCCTCTCACCCTCTAGCTTCCCTCTCCACTGCCTCCCTCGCTCGCTATCTCCTGCCTAAGCGCTAAGCTAAGCGACCTGCAGTTCTGCAATGCTAAGGCCAACGTAGAGCTGCCGCTTAATCCCGTCTCGCTTGATTGGTTTCTGACAAGAACGAGATTATCGAGAGGTTTCAATTCATTAGCTTAGCTTAGCTAATTAGCTTGAGGGACGCCAGCCATGGCGCCCAAGGCAGGGAAGGCCAAGCCGCACAAGGCCAAGGGAGACAAGAAGAAGAAGGAAGAGAAAGTTCTGCCCACCGTGCTGGACGTCACCGTTGAGACGCCGGACTACACGCAGCTGACGCTCAAGGGCATATCAACGGACAAGATCCTCGACGTCCGGAAGCTCCTGGCCGTCCACGTGGACACATGCCACCTCACCAACTACTCCCTGTCCCACGAGGTTCGTGGGGCCCAGCTCAAGGACACGGTGGAGGTCGCCTCCCTGAAGCCGTGCCACGTCAGCATCGTCGAGGAGGGCTACACGGAGGAGCTCGCCGTGGCGCACGTGCGGCGGCTGCTCGACATCGTCGCCTGCACCGCCGCGTTCGGGCCGAGGAAGAGTGCGCCCGAGCAGAAGCCCGCATCGCCGTCGTCTCCCGATGCGCCACCGCCACCGCCCCCGCCGGCGTCGCCCGACGCCGCCAAGACCCCCGGGTCGCCCGCCGGCGGCGGCGGCGGCGTTGGCGCCGGAGGCGGTGGAGGAGAGGAGCCGATGTACCCGCCGCCGAAGCTGGGACAGTTCTACGAGTTCTTCTCCTTCTCCCACCTCTCCCCGCCCCTCCATTATATTAGGAGGTCGACGCGCCCATTCGTTGATGACAAGACAGAGGACGACTTCTTCCAGATCGATGTAAGGGTTTGTAGTGGGAAGCCGGTGACCATCGTGGCCTCCAAAGCTGGATTCTATCCAGCAGGGAAGCGAGCGCTCATCAGCCACTCCCTTGTTGGGCTGTTGCAGCAGACGAGCCGGGCGTTTGATGGAGCTTACAAGGCTCTTATGAAGGCTTTTGTTGAGCATAATAAGTTTGGAAATCTTCCTTATGGATTCCGGTCAAACACTTGGGTGGTCCCTCCTGCTGTTGCTGATTTGCCATCGGTGTTTCCACCCCTTCCAACTGAAGATGAAACATGGGGTAGCAATGGTGGTGGTCAGGGAAGAGATGGAAAACATGACCATAGGCCATGGGCAAAAGAATTTGCCATACTGGCTGCAATGCCTTGCAAAACAGCTGAGGAGAGGCAAATCCGAGACAGGAAGGCTTTCCTACTCCATAGTTTATTTGTAGATGTTGCAGTTCTTAAAGCTGTTGCAGCTATTCAGCAAATGGTCCCTGACAAGAGTTCACTTGAAACACCGAATGACACCACAAATCCAGATTTGCACACGCAACAAATTGGAGATATGAAAATAACAGTCACAAAGGACAAAGCGGATGCAAGTTCTAAGTTAGATGTCAAGTTAGATGGAAGTCAAGCTCCAGGAATGCTGTCTGATGAACTTGCTAAGAGAAATCTGTTGAAGGGCATCACTGCTGACGAGAGTGCAACAGTACATGATACTGCTACTCTTGGTGTGGTGGTTGTGAAGCATTGTGGATACACAGCTGTTGTTCAAGTTCCAGCAGATGCTCAACTGACAACTGTTTCTCTAGCACAACATGATATTGACATTGAAGATCAGCCTGAAGGAGGTAGCAACGCACTGAATGTCAATAGCTTAAGGATGCTGCTTCATAAACCATGTATTCAACCATCTGGAGGAGTTCAGCGGTTGCAAAGTTCTCCTCATGGCCTTCCTTCTCCCTCAGACAGTATAGTAGAATCACCTGCAACTGCATCTCCACAAGTTTCTGAAATTAGCCAGACCAGTCCTGAAGGAAATGATACAACCAGTGGGGTCGATACTGAAAATGGGAGTGAAAAACAGGACACTGATGGCAAGAACCATGTGGAAAGTAAAGACGGCGAAGGGGAGCCTGAGCAAACCGAAGCTTCCAAAGGTGATGGAGATGGTGCAATTACCCCGGAAGATGGTTCAGCCGTGACTGAAAATCCAAAGTCCTGGGCAGACTACAGTGATGGAGAAGCTGAGGCTGTTGAGGTTGCAAGCTGAGAAAAGATAAACCTTCTCAGTACACACAGAAAATTTTACCTCTTTTACAGATGAGAC-TTTTTCTTCTGGACAGCATACAAATGCAAAACCGGCACA-CTGCTATTTTGTGTAGAGAATTAGTTCCTTTCCTGATCCATCTCATGGTATGTAGCATCTACACGTGCTTCTGCAGTTCCAATGGCCTTGAAAGGTTATGCAATGGCAGAGAACTTTGAAGATCTCTTCCTGAGAGTGATCGATGAGCCCT-TTTTTTCAGCTTGCTTTGCATTTGCTCCAAAGAAACTTGGGAAGAGCAAGCACACGAGAGATTGGTTAGCGCATATATACCATAGTTCATAGTCTTCCCTTTTTGCCTATCATTTTGTTCAACTTGTTATTATGTACTGGACCATCTGTCGACATAACACATGTGAACTTATTTTTACTCTGAATTTTGATATATTAGAATTGTTGAACCATGTAAATTGTAAAGAAAGTGGTGCCTATTTGGCCTCTTGCTTGATGTGAATTTTACCCAAGATGAAAAAAAAGA] [+] EMBL AK067390 [CTATATATCCCTTATCCTCTTATCGCCTCTCACCCTCTAGCTTCCCTCTCCACTGCCTCCCTCGCTCGCTATCTCCTGCCTAAGCGCTAAGCTAAGCGACCTGCAGTTCTGCAATGCTAAGGCCAACGTAGAGCTGCCGCTTAATCCCGTCTCGCTTGATTGGTTTCTGACAAGAACGAGATTATCGAGAGGTTTCAATTCATTAGCTTAGCTTAGCTAATTAGCTTGAGGGACGCCAGCCATGGCGCCCAAGGCAGGGAAGGCCAAGCCGCACAAGGCCAAGGGAGACAAGAAGAAGAAGGAAGAGAAAGTTCTGCCCACCGTGCTGGACGTCACCGTTGAGACGCCGGACTACACGCAGCTGACGCTCAAGGGCATATCAACGGACAAGATCCTCGACGTCCGGAAGCTCCTGGCCGTCCACGTGGACACATGCCACCTCACCAACTACTCCCTGTCCCACGAGGTTCGTGGGGCCCAGCTCAAGGACACGGTGGAGGTCGCCTCCCTGAAGCCGTGCCACGTCAGCATCGTCGAGGAGGGCTACACGGAGGAGCTCGCCGTGGCGCACGTGCGGCGGCTGCTCGACATCGTCGCCTGCACCGCCGCGTTCGGGCCGAGGAAGAGTGCGCCCGAGCAGAAGCCCGCATCGCCGTCGTCTCCCGATGCGCCACCGCCACCGCCCCCGCCGGCGTCGCCCGACGCCGCCAAGACCCCCGGGTCGCCCGCCGGCGGCGGCGGCGGCGTTGGCGCCGGAGGCGGTGGAGGAGAGGAGCCGATGTACCCGCCGCCGAAGCTGGGACAGTTCTACGAGTTCTTCTCCTTCTCCCACCTCTCCCCGCCCCTCCATTATATTAGGAGGTCGACGCGCCCATTCGTTGATGACAAGACAGAGGACGACTTCTTCCAGATCGATGTAAGGGTTTGTAGTGGGAAGCCGGTGACCATCGTGGCCTCCAAAGCTGGATTCTATCCAGCAGGGAAGCGAGCGCTCATCAGCCACTCCCTTGTTGGGCTGTTGCAGCAGACGAGCCGGGCGTTTGATGGAGCTTACAAGGCTCTTATGAAGGCTTTTGTTGAGCATAATAAGTTTGGAAATCTTCCTTATGGATTCCGGTCAAACACTTGGGTGGTCCCTCCTGCTGTTGCTGATTTGCCATCGGTGTTTCCACCCCTTCCAACTGAAGATGAAACATGGGGTAGCAATGGTGGTGGTCAGGGAAGAGATGGAAAACATGACCATAGGCCATGGGCAAAAGAATTTGCCATACTGGCTGCAATGCCTTGCAAAACAGCTGAGGAGAGGCAAATCCGAGACAGGAAGGCTTTCCTACTCCATAGTTTATTTGTAGATGTTGCAGTTCTTAAAGCTGTTGCAGCTATTCAGCAAATGGTCCCTGACAAGAGTTCACTTGAAACACCGAATGACACCACAAATCCAGATTTGCACACGCAACAAATTGGAGATATGAAAATAACAGTCACAAAGGACAAAGCGGATGCAAGTTCTAAGTTAGATGTCAAGTTAGATGGAAGTCAAGCTCCAGGAATGCTGTCTGATGAACTTGCTAAGAGAAATCTGTTGAAGGGCATCACTGCTGACGAGAGTGCAACAGTACATGATACTGCTACTCTTGGTGTGGTGGTTGTGAAGCATTGTGGATACACAGCTGTTGTTCAAGTTCCAGCAGATGCTCAACTGACAACTGTTTCTCTAGCACAACATGATATTGACATTGAAGATCAGCCTGAAGGAGGTAGCAACGCACTGAATGTCAATAGCTTAAGGATGCTGCTTCATAAACCATGTATTCAACCATCTGGAGGAGTTCAGCGGTTGCAAAGTTCTCCTCATGGCCTTCCTTCTCCCTCAGACAGTATAGTAGAATCACCTGCAACTGCATCTCCACAAGTTTCTGAAATTAGCCAGACCAGTCCTGAAGGAAATGATACAACCAGTGGGGTCGATACTGAAAATGGGAGTGAAAAACAGGACACTGATGGCAAGAACCATGTGGAAAGTAAAGACGGCGAAGGGGAGCCTGAGCAAACCGAAGCTTCCAAAGGTGATGGAGATGGTGCAATTACCCCGGAAGATGGTTCAGCCGTGACTGAAAATCCAAAGTCCTGGGCAGACTACAGTGATGGAGAAGCTGAGGCTGTTGAGGTTGCAAGCTGAGAAAAGATAAACCTTCTCAGTACACACAGAAAATTTTACCTCTTTTACAGATGAGACTTTTTTCTTCTGGACAGCATACAAATGCAAAACCGGCACA CTGCTATTTTGTGTAGAGAATTAGTTCCTTTCCTGATCCATCTCATGGTATGTAGCATCTACACGTGCTTCTGCAGTTCCAATGGCCTTGAAAGGTTATGCAATGGCAGAGAACTTTGAAGATCTCTTCCTGAGAGTGATCGATGAGCCCT TTTTTTCAGCTTGCTTTGCATTTGCTCCAAAGAAACTTGGGAAGAGCAAGCACACGAGAGATTGGTTAGCGCATATATACCATAGTTCATAGTCTTCCCTTTTTGCCTATCATTTTGTTCAACTTGTTATTATGTACTGGACCATCTGTCGACATAACACATGTGAACTTATTTTTACTCTGAATTTTGATATATTAGAA ] [-] EMBL CB623902 [ AGTAGAATCACCTGCAACTGCATCTCCACAAGTTTCTGAAATTAGCCAGACCAGTCCTGAAGGAAATGATACAACCAGTGGGGTCGATACTGAAAATGGGAGTGAAAAACAGGACACTGATGGCAATAACCATGTGGAAAGTAAAGACGGCGAAGGGGAGCCTGAGCAAACCGAAGCTTCCAAAGGTGATGGAGATGGTGCAATTACCCCGGAAGATGGTTCAGCCGTGACTGAAAATCCAAAGTCCTGGGCAGACTACAGTGATGGAGAAGCTGAGGCTGTTGAGGTTGCAAGCTGAGAAAAGATAAACCTTCTCAGTACACACAGAAAATTTTACCTCTTTTACAGATGAGAC TTTTTCTTCTGGACAGCATACAAATGCAAAACCGGCACA CTGCTATTTTGTGTAGAGAATTAGTTCCTTTCCTGATCCATCTCATGGTATGTAGCATCTACACGTGCTTCTGCAGTTCCAATGGCCTTGAAAGGTTATGCAATGGCAGAGAACTTTGAAGATCTCTTCCTGAGAGTGATCGATGAGCCCT TTTTTCCAGCTTGCTTTGCATTTGCTCCAAAGAAACTTGGGAAGAGCAAGCACACGAGAGATTGGTTAGCGCATATATACCATAGTTCATAGTCTTCCCTTTTTGCCTATCATTTTGTTCAACTTGTTATTATGTACTGGACCATCTGTCGACATAACACATGTGAACTTATTTTTACTCTGAATTTTGATATATTAGAATTGTTGAACCATGTAAATTGTAAAGAAAGTGGTGCCTATTTGGCCTCTTGCTTGATGTGAATTTTACTCAAGATGAAAAAAAAGA] [-] EMBL CB649661 [ TTAGCCAGACCAGTCCTGAAGGAAATGATACAACCAGTGGGGTCGATACTGAAAATGGGAGTGAAAAACAGGACACTGATGGCAAGAACCATGTGGAAAGTAAAGACGGCGAAGGGGAGCCTGAGCAAACCGAAGCTTCCAAAGGTGATGGAGATGGTGCAATTACCCCGGAAGATGGTTCAGCCGTGACTGAAAATCCAAAGTCCTGGGCAGACTACAGTGATGGAGAAGCTGAGGCTGTTGAGGTTGCAAGCTGAGAAAAGATAAACCTTCTCAGTACACACAGAAAATTTTACCTCTTTTACAGATGAGAC TTTTTCTTCTGGACAGCATACAAATGCAAAACCGGCACA CTGCTATTTTGTGTAGAGAATTAGTTCCTTTCCTGATCCATCTCATGGTATGTAGCATCTACACGTGCTTCTGCAGTTCCAATGGCCTTGAAAGGTTATGCAATGGCAGAGAACTTTGAAGATCTCTTCCTGAGAGTGATCGATGAGCCCT TTTTTTCAGCTTGCTTTGCATTTGCTCCAAAGAAACTTGGGAAGAGCAAGCACACGAGAGATTGGTTAGCGCATATATACCATAGTTCATAGTCTTCCCTTTTTGCCTATCATTTTGTTCAACTTGTTATTATGTACTGGACCATCTGTCGACATAACACATGTGAACTTATTTTTACTCTGAATTTTGATATATTAGAATTGTTGAACCATGTAAATTGTAAAGAAAGTGGTGCCTATTTGGCCTCTTGCTTGATGTGAATTTTACCCAAGATGAAAt ] [+] EMBL BI812794 [ GAGAC TTTTTCTTCTGGACAGCATAC AATGCCAAACCGGCACACCTGCTATTTTGTGTAGAGAATTAGTTCCTTTCCTGATCCATCTCATGGTATGTAGCATCTACACGTGCTTCTGCAGTTCC ATGGCCTTGAAAGGTTATGC ATGGCAGAGAACTTTGAAGATCTCTTCCTGAGAGTGATCGATGAGCCCTGTTTTTTCAGCTTGCTTTGCATTTGCTCCAAAGAAACTTGGGAAGAGCAAGCACACGAGAGATTGGTTAGCGCATATATACCATAGTTCATAGTTTTCCCTTTTTGCCTATCATTTTGTTCAACTTGTTATTATGTACTGGACCATCTGTCGACATAACACATGTGAACTTATTTTTACTCTGAATTTTGATATATTAGAATTGTTGAACCATGTAAATTGTAAAGAAAGTGGTGCCTATTTGGCCTCTTGCTTGATGTGAATTTTACCCCAGATGAAAAAAAAaa] consensusID : consensus_13653#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 913 fasta sequence [CTCGGAGTCCTAATGGCAACCCAGCATCTCCAAACGGACCTCTAGCATCACCAGGTGGCACTGAAGCTTCACCTCATGGCCTTCCTTCTCCCTCAGACAGTATAGTAGAATCACCTGCAACTGCATCTCCACAAGTTTCTGAAATTAGCCAGACCAGTCCTGAAGGAAATGATACAACCAGTGGGGTCGATACTGAAAATGGGAGTGAAAAACAGGACACTGATGGCAAGAACCATGTGGAAAGTAAAGACGGCGAAGGGGAGCCTGAGCAAACCGAAGCTTCCAAAGGTGATGGAGATGGTGCAATTACCCCGGAAGATGGTTCAGCCGTGACTGAAAATCCAAAGTCCTGGGCAGACTACAGTGATGGAGAAGCTGAGGCTGTTGAGGTTGCAAGCTG-AGAAAAGATAAACCTTCTCAGTACACACAGAAAATTTTACCTCTTTTACAGATGAGACTTTTTCTTCTGGAC-AGCATACAAATGCAAAACCGGCACACTGCTATTTTGTGTAGAGAATTAGTTCCTTTCCTGATCCATCTCATGGTATGTAGCATCTACACGTGCTTCTGCAGTTCCAATGGCCTTGAAAGGTTATGCAATGGCAGAGAACTTTGAAGATCTCTTCCTGAGAGTGATCGATGAGCCCTTTTTTTCAGCTTGCTTTGCATTTGCTCCAAAGAAACTTGGGAAGAGCAAGCACACGAGAGATTGGTTAGCGCATATATACCA-TAGTTCATAGTCTTCCCTTTTTGCCTATCATTTTGTTCAACTTGTTATTATGTACTGGACCATCTGTCGACATAACACATGTGAACTTATTTTTACTCTGAATTTTGATATATTAGAATTGTTGAACCATGTAAATTGTAAAGAAAGTGGTGCCTATTTGGCCTCTTGCTTGATGTGAATTTT] [+] EMBL AK060468 [CTCGGAGTCCTAATGGCAACCCAGCATCTCCAAACGGACCTCTAGCATCACCAGGTGGCACTGAAGCTTCACCTCATGGCCTTCCTTCTCCCTCAGACAGTATAGTAGAATCACCTGCAACTGCATCTCCACAAGTTTCTGAAATTAGCCAGACCAGTCCTGAAGGAAATGATACAACCAGTGGGGTCGATACTGAAAATGGGAGTGAAAAACAGGACACTGATGGCAAGAACCATGTGGAAAGTAAAGACGGCGAAGGGGAGCCTGAGCAAACCGAAGCTTCCAAAGGTGATGGAGATGGTGCAATTACCCCGGAAGATGGTTCAGCCGTGACTGAAAATCCAAAGTCCTGGGCAGACTACAGTGATGGAGAAGCTGAGGCTGTTGAGGTTGCAAGCTG AGAAAAGATAAACCTTCTCAGTACACACAGAAAATTTTACCTCTTTTACAGATGAGACTTTTTCTTCTGGAC AGCATACAAATGCAAAACCGGCACACTGCTATTTTGTGTAGAGAATTAGTTCCTTTCCTGATCCATCTCATGGTATGTAGCATCTACACGTGCTTCTGCAGTTCCAATGGCCTTGAAAGGTTATGCAATGGCAGAGAACTTTGAAGATCTCTTCCTGAGAGTGATCGATGAGCCCTTTTTTTCAGCTTGCTTTGCATTTGCTCCAAAGAAACTTGGGAAGAGCAAGCACACGAGAGATTGGTTAGCGCATATATACCA TAGTTCATAGTCTTCCCTTTTTGCCTATCATTTTGTTCAACTTGTTATTATGTACTGGACCATCTGTCGACATAACACATGTGAACTTATTTTTACTCTGAATTTTGATATATTAGAATTGTTGAACCATGTAAATTGTAAAGAAAGTGGTGCCTATTTGGCCTCTTGCTTGATGTGAATTTT] [-] EMBL CB635718 [ GGTGGCACTGAAGCTTCACCTCATGGCCTTCCTTCTCCCTCAGACAGTATAGTAGAATCACCTGCAACTGCATCTCCACAAGTTTCTGAAATTAGCCAGACCAGTCCTGAAGGAAATGATACAACCAGTGGGGTCGATACTGAAAATGGGAGTGAAAAACAGGACACTGATGGCAAGAACCATGTGGAAAGTAAAGACGGCGAAGGGGAGCCTGAGCAAACCGAAGCTTCCAAAGGTGATGGAGATGGTGCAATTACCCCGGAAGATGGTTCAGCCGTGACTGAAAATCCAAAGTCCTGGGCAGACTACAGTGATGGAGAAGCTGAGGCTGTTGAGGTTGCAAGCTG AGAAAAGATAAACCTTCTCAGCACACACAGAAAATTTTACCTCTTTTACAGATGAGACTTTTTCTTCTGGAC AGCATACAAATGCAAAACCGGCACACTGCTATTTTGTGTAGAGAATTAGTTCCTTTCCTGATCCATCTCATGGTATGTAGCATCTACACGTGCTTCTGCAGTTCCAATGGCCTTGAAAGGTTATGCAATGGCAGAGAACTTTGAAGATCTCTTCCTGAGAGTGATCGATGAGCCCTTTTTTTCAGCTTGCTTTGCATTTGCTCCAAAGAAACTTGGGAAGAGCAAGCACACGAGAGATTGGTTAGCGCATATATACCA TAGTTCATAGTCTTCCCTTTTTGCCTATCATTTTGTTCAACTTGTTATTATGTACTGGACCATCTGTCGACATAACGCATGTGAACTTATTTTTACTCTGAATTTTGATAaaaaaaaga ] [-] EMBL CB621435 [ nTCATGGCCTTCCTTCTCCCTCAGACAGTATAGTAGAATCACCTGCAACTGCATCTCCACAAGTTTCTGAAATTAGCCAGACCAGTCCTGAAGGAAATGATACAACCAGTGGGGTCGATACTGAAAATGGGAGTGAAAAACAGGACACTGATGGCAATAACCATGTGGAAAGTAAAGACGGCGAAGGGGAGCCTGAGCAAACCGAAGCTTCCAAAGGTGATGGAGATGGTGCAATTACCCCGGAAGATGGTTCAGCCGTGACTGAAAATCCAAAGTCCTGGGCAGACTACAGTGATGGAGAAGCTGAGGCTGTTGAGGTTGCAAGCTG AGAAAAGATAAACCTTCTCAGTACACACAGAAAATTTTACCTCTTTTACAGATGAGACTTTTTCTTCTGGAC AGCATACAAATGCAAAACCGGCACACTGCTATTTTGTGTAGAGAATTAGTTCCTTTCCTGATCCATCTCATGGTATGTAGCATCTACACGTGCTTCTGCAGTTCCAATGGCCTTGAAAGGTTATGCAATGGCAGAGAACTTTGAAGATCTCTTCCTGAGAGTGATCGATGAGCCCTTTTTTCCAGCTTGCTTTGCATTTGCTCCAAAGAAACTTGGGAAGAGCAAGCACACGAGAGATTGGTTAGCGCATATATACCA TAGTTCATAGTCTTCCCTTTTTGCCTATCATTTTGTTCAACTTGTTATTATGTACTGGACCATCTGTCGACATAACACATGTGAACTTATTTTTACTCTGAATTTTGATATATTAGAATTGTTGAACCATGTAAATTGTAAAAAAAaag ] [-] EMBL CB628793 [ GTAGAATCACCTGCAACTGCATCTCCACAAGTTTCTGAAATTAGCCAGACCAGTCCTGAAGGAAATGATACAACCAGTGGGGTCGATACTGAAAATGGGAGTGAAAAACAGGACACTGATGGCAAGAACCATGTGGAAAGTAAAGACGGCGAAGGGGAGCCTGAGCAAACCGAAGCTTCCAAAGGTGATGGAGATGGTGCAATTACCCCGGAAGATGGTTCAGCCGTGACTGAAAATCCAAAGTCCTGGGCAGACTACAGTGATGGAGAAGCTGAGGCTGTTGAGGTTGCAAGCTG AGAAAAGATAAACCTTCTCAGCACACACAGAAAATTTTACCTCTTTTACAGATGAGACTTTTTCTTCTGGAC AGCATACAAATGCAAAACCGGCACACTGCTATTTTGTGTAGAGAATTAGTTCCTTTCCTGATCCATCTCATGGTATGTAGCATCTACACGTGCTTCTGCAGTTCCAATGGCCTTGAAAGGTTATGCAATGGCAGAGAACTTTGAAGATCTCTTCCTGAGAGTGATCGATGAGCCCTTTTTTTCAGCTTGCTTTGCATTTGCTCCAAAGAAACTTGGGAAGAGCAAGCACACGAGAGATTGGTTAGCGCATATATACCA TAGTTCATAGTCTTCCCTTTTTGCCTATCATTTTGTTCAACTTGTTATTATGTACTGGACCATCTGTCGACATAACACATGTGAACTTATTTTTACTCTGAATTTTGATATATTAGAATTGTTGAACCA ] [-] EMBL CB621434 [ TAGAATCACCTGCAACTGCATCTCCACAAGTTTCTGAAATTAGCCAGACCAGTCTTGAAGGAAATGATACAACCAGTGGGGTCGATACTGAAAATGGGAGTGAAAAACAGGACACTGATGGCAATAACCATGTGGAAAGTAAAGACGGCGAAGGGGAGCCTGAGCAAACCGAAGCTTCCAAAGGTGATGGAGATGGTGCAATTACCCCGGAAGATGGTTCAGCCGTGACTGAAAATCCAAAGTCCTGGGCAGACTACAGTGATGGAGAAGCTGAGGCTGTTGAGGTTGCAAGCTG AGAAAAGATAAACCTTCTCAGTACACACAGAAAATTTTACCTCTTTTACAGATGAGACTTTTTCTTCTGGAC AGCATACAAATGCAAAACCGGCACACTGCTATTTTGTGTAGAGAATTAGTTCCTTTCCTGATCCATCTCATGGTATGTAGCATCTACACGTGCTTCTGCAGTTCCAATGGCCTTGAAAGGTTATGCAATGGCAGAGAACTTTGAAGATCTCTTCCTGAGAGTGATCGATGAGCCCTTTTTTCCAGCTTGCTTTGCATTTGCTCCAAAGAAACTTGGGAAGAGCAAGCACACGAGAGATTGGTTAGCGCATATATACCA TAGTTCATAGTCTTCCCTTTTTGCCTATCATTTTGTTCAACTTGTTATTATGTACTGGACCATCTGTCGACATAACACATGTGAACTTATTTTTACTCTGAATTAGGGTATATTAGAATTGTTGAACCATGTAAATTGTATATAAAaga ] [-] EMBL CB684160 [ ATTAGCCAGACCAGTCTTGAAGGAAATGATACAACCAGTGGGGTCGATACTGAAAATGGGAGTGAAAAACAGGACACTGATGGCAAGAACCATGTGGAAAGTAAAGACGGCGAAGGGGAGCCTGAGCAAACCGAAGCTTCCAAAGGTGATGGAGATGGTGCAATTACCCCGGAAGATGGTTCAGCCGTGACTGAAAATCCAAAGTCCTGGGCAGACTACAGTGATGGAGAAGCTGAGGCTGTTGAGGTTGCAAGCTG AGAAAAGATAAACCTTCTCAGTACACACAGAAAATTTTACCTCTTTTACAGATGAGACTTTTTCTTCTGGAC AGCATACAAATGCAAAACCGGCACACTGCTATTTTGTGTAGAGAATTAGTTCCTTTCCTGATCCATCTCATGGTATGTAGCATCTACACGTGCTTCTGCAGTTCCAATGGCCTTGAAAGGTTATGCAATGGCAGAGAACTTTGAAGATCTCTTCCTGAGAGTGATCGATGAGCCCTTTTTTTCAGCTTGCTTTGCATTTGCTCCAAAGAAACTTGGGAAGAGCAAGCACACGAGAGATTGGTTAGCGCATATATACCA TAGTTCATAGTCTTCCCTTTTTGCCTATCATTTTGTTCAACTTGTTATTATGTACTGGACCATCTGTCGACATAACACATGTGAACTTATTTTTACTAAGAATTTTGATATATTAGAATTGTTGACCCAaaa ] [-] EMBL CB638260 [ GAGATGGTGCAATTACCCCGGAAGATGGTTCAGCCGTGACTGAAAATCCAAAGTCCTGGGCAGACTACAGTGATGGAGAAGCTGAGGCTGTTGAGGTTGCAAGCTG AGAAAAGATAAACCTTCTCAGTACACACAGAAAATTTTACCTCTTTTACAGATGAGACTTTTTCTTTTGGAC AGCATACAAATGCAAAACCGGCACACTGCTATTTTGTGTAGAGAATTAGTTCCTTTCCTGATCCATCTCATGGTATGTAGCATCTACACGTGCTTCTGCAGTTCCAATGGCCTTGAAAGGTTATGCAATGGCAGAGAACTTTGAAGATCTCTTCCTGAGAGTGATCGATGAGCCCTTTTTTTCAGCTTGCTTTGCATTTGCTCCAAAGAAACTTGGGAAGAGCAAGCACACGAGAGATTGGTTAGCGCATATATACCA TAGTTCATAGTCTTCCCTTTTTGCCTATCATTTTGTTCAACTTGTTATTATGTACTGGACCATCTGTCGACATAACACATGTGAACTTATTTTTACTCTGAATTTTG ATATTAGAATTGTTGAACCATGTAAATTGTAAAGAAAGTGGTGCCTATTTGGCCTCTTGCTTGATGTGAA ] [+] EMBL BI812685 [ tTTGA GTT CAA CTGTAGAAAAGATAAACCTTCTCAGTACACACAGAAAATTTTACCTCTTTTACAGATGAGACTTTTTCTTCTGGACAAGCATAC AATGC AAACCGGCACACTGCTATTTTGTGTAGAGAATTAGTTCCTTTCCTGATCCATCTCATGGTATGTAGCATCTACACGTGCTTCTGCAGTTCC ATGGCCTTGAAAGGTTATGCAATGGCAGAGAACTTTGAAGATCTCTTCCTGAGAGTGATCGATGAGCCCTTTTTTTCAGCTTGCTTTGCATTTGCTCCCAAGAAACTTGGGAAGAGCAAGCACACGAGAGATTGGTTAGCGCATATATACCACTAGTTCATAGTCTTCCCTTTTTGCCTATCATTTTGTTCAACTTGTTATTATGTACTGGACCATCTGTCGACATAACACATGTGAACTTATTTTTACTCTGAATTTTGATATATTAGAATTGTTGAACCAaaaaaaaaa ] consensusID : consensus_13653#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 541 fasta sequence [ATACACAGCTGTTGATCAAGTTCCAGCAGATGCTCAACTGACAACTGTTTCTCTAGCACAACATGATATTGACATTGAAGATCAGCCTGAAGGAGGTATCAACGCACTGAATGTCAATAGCTTAAGGATGCTGCTTCATAAACCATGTATTCAACCATCTGGAGGAGTTCAGCGGTTGCAAAGTTCTCCTCAAGAGAGTGAATATAGTACAAATTTTGTCCGTAAGATAATGACAGATAGTCTGCAGAAGCTTGAATGTGAAGCTCCAAGAGAAACAAGACCAATAAGATGGGAGCTTGGAGCTTGCTGGGTGCAGCACCTACAGAATCAGACTTCTGAGAAGGCCGACACTAAGAAAAATGAGGAGACCAAGGATGTTCCTACAGTGAAAGGTCTGGGGAAACAGTTTGGTCAGCTGAAGGAGATCAAGAAGAAGACAGATGATAAGAGTGGAAAAGGTGCATCCACAAAAGAAAATACTTCGACAAATACAAATGATGCGCAAACAGTCAACTCTTCCAGCACAAAGGAGGATAATGAG] [+] EMBL CB638259 [ATACACAGCTGTTGATCAAGTTCCAGCAGATGCTCAACTGACAACTGTTTCTCTAGCACAACATGATATTGACATTGAAGATCAGCCTGAAGGAGGTATCAACGCACTGAATGTCAATAGCTTAAGGATGCTGCTTCATAAACCATGTATTCAACCATCTGGAGGAGTTCAGCGGTTGCAAAGTTCTCCTCAAGAGAGTGAATATAGTACAAATTTTGTCCGTAAGATAATGACAGATAGTCTGCAGAAGCTTGAATGTGAAGCTCCAAGAGAAACAAGACCAATAAGATGGGAGCTTGGAGCTTGCTGGGTGCAGCACCTACAGAATCAGACTTCTGAGAAGGCCGACACTAAGAAAAATGAGGAGACCAAGGATGTTCCTACAGTGAAAGGTCTGGGGAAACAGTTTGGTCAGCTGAAGGAGATCAAGAAGAAGACAGATGATAAGAGTGGAAAAGGTGCATCCACAAAAGAAAATACTTCGACAAATACAAATGATGCGCAAACAGTCAACTCTTCCAGCACAAAGGAGGATAATGAG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_13653#0 CTATATATCCCTTATCCTCTTATCGCCTCTCACCCTCTAGCTTCCCTCTCCACTGCCTCC 60 consensus_13653#1 ------------------------------------------------------------ consensus_13653#2 ------------------------------------------------------------ consensus_13653#0 CTCGCTCGCTATCTCCTGCCTAAGCGCTAAGCTAAGCGACCTGCAGTTCTGCAATGCTAA 120 consensus_13653#1 ------------------------------------------------------------ consensus_13653#2 ------------------------------------------------------------ consensus_13653#0 GGCCAACGTAGAGCTGCCGCTTAATCCCGTCTCGCTTGATTGGTTTCTGACAAGAACGAG 180 consensus_13653#1 ------------------------------------------------------------ consensus_13653#2 ------------------------------------------------------------ consensus_13653#0 ATTATCGAGAGGTTTCAATTCATTAGCTTAGCTTAGCTAATTAGCTTGAGGGACGCCAGC 240 consensus_13653#1 ------------------------------------------------------------ consensus_13653#2 ------------------------------------------------------------ consensus_13653#0 CATGGCGCCCAAGGCAGGGAAGGCCAAGCCGCACAAGGCCAAGGGAGACAAGAAGAAGAA 300 consensus_13653#1 ------------------------------------------------------------ consensus_13653#2 ------------------------------------------------------------ consensus_13653#0 GGAAGAGAAAGTTCTGCCCACCGTGCTGGACGTCACCGTTGAGACGCCGGACTACACGCA 360 consensus_13653#1 ------------------------------------------------------------ consensus_13653#2 ------------------------------------------------------------ consensus_13653#0 GCTGACGCTCAAGGGCATATCAACGGACAAGATCCTCGACGTCCGGAAGCTCCTGGCCGT 420 consensus_13653#1 ------------------------------------------------------------ consensus_13653#2 ------------------------------------------------------------ consensus_13653#0 CCACGTGGACACATGCCACCTCACCAACTACTCCCTGTCCCACGAGGTTCGTGGGGCCCA 480 consensus_13653#1 ------------------------------------------------------------ consensus_13653#2 ------------------------------------------------------------ consensus_13653#0 GCTCAAGGACACGGTGGAGGTCGCCTCCCTGAAGCCGTGCCACGTCAGCATCGTCGAGGA 540 consensus_13653#1 ------------------------------------------------------------ consensus_13653#2 ------------------------------------------------------------ consensus_13653#0 GGGCTACACGGAGGAGCTCGCCGTGGCGCACGTGCGGCGGCTGCTCGACATCGTCGCCTG 600 consensus_13653#1 ------------------------------------------------------------ consensus_13653#2 ------------------------------------------------------------ consensus_13653#0 CACCGCCGCGTTCGGGCCGAGGAAGAGTGCGCCCGAGCAGAAGCCCGCATCGCCGTCGTC 660 consensus_13653#1 ------------------------------------------------------------ consensus_13653#2 ------------------------------------------------------------ consensus_13653#0 TCCCGATGCGCCACCGCCACCGCCCCCGCCGGCGTCGCCCGACGCCGCCAAGACCCCCGG 720 consensus_13653#1 ------------------------------------------------------------ consensus_13653#2 ------------------------------------------------------------ consensus_13653#0 GTCGCCCGCCGGCGGCGGCGGCGGCGTTGGCGCCGGAGGCGGTGGAGGAGAGGAGCCGAT 780 consensus_13653#1 ------------------------------------------------------------ consensus_13653#2 ------------------------------------------------------------ consensus_13653#0 GTACCCGCCGCCGAAGCTGGGACAGTTCTACGAGTTCTTCTCCTTCTCCCACCTCTCCCC 840 consensus_13653#1 ------------------------------------------------------------ consensus_13653#2 ------------------------------------------------------------ consensus_13653#0 GCCCCTCCATTATATTAGGAGGTCGACGCGCCCATTCGTTGATGACAAGACAGAGGACGA 900 consensus_13653#1 ------------------------------------------------------------ consensus_13653#2 ------------------------------------------------------------ consensus_13653#0 CTTCTTCCAGATCGATGTAAGGGTTTGTAGTGGGAAGCCGGTGACCATCGTGGCCTCCAA 960 consensus_13653#1 ------------------------------------------------------------ consensus_13653#2 ------------------------------------------------------------ consensus_13653#0 AGCTGGATTCTATCCAGCAGGGAAGCGAGCGCTCATCAGCCACTCCCTTGTTGGGCTGTT 1020 consensus_13653#1 ------------------------------------------------------------ consensus_13653#2 ------------------------------------------------------------ consensus_13653#0 GCAGCAGACGAGCCGGGCGTTTGATGGAGCTTACAAGGCTCTTATGAAGGCTTTTGTTGA 1080 consensus_13653#1 ------------------------------------------------------------ consensus_13653#2 ------------------------------------------------------------ consensus_13653#0 GCATAATAAGTTTGGAAATCTTCCTTATGGATTCCGGTCAAACACTTGGGTGGTCCCTCC 1140 consensus_13653#1 ------------------------------------------------------------ consensus_13653#2 ------------------------------------------------------------ consensus_13653#0 TGCTGTTGCTGATTTGCCATCGGTGTTTCCACCCCTTCCAACTGAAGATGAAACATGGGG 1200 consensus_13653#1 ------------------------------------------------------------ consensus_13653#2 ------------------------------------------------------------ consensus_13653#0 TAGCAATGGTGGTGGTCAGGGAAGAGATGGAAAACATGACCATAGGCCATGGGCAAAAGA 1260 consensus_13653#1 ------------------------------------------------------------ consensus_13653#2 ------------------------------------------------------------ consensus_13653#0 ATTTGCCATACTGGCTGCAATGCCTTGCAAAACAGCTGAGGAGAGGCAAATCCGAGACAG 1320 consensus_13653#1 ------------------------------------------------------------ consensus_13653#2 ------------------------------------------------------------ consensus_13653#0 GAAGGCTTTCCTACTCCATAGTTTATTTGTAGATGTTGCAGTTCTTAAAGCTGTTGCAGC 1380 consensus_13653#1 ------------------------------------------------------------ consensus_13653#2 ------------------------------------------------------------ consensus_13653#0 TATTCAGCAAATGGTCCCTGACAAGAGTTCACTTGAAACACCGAATGACACCACAAATCC 1440 consensus_13653#1 ------------------------------------------------------------ consensus_13653#2 ------------------------------------------------------------ consensus_13653#0 AGATTTGCACACGCAACAAATTGGAGATATGAAAATAACAGTCACAAAGGACAAAGCGGA 1500 consensus_13653#1 ------------------------------------------------------------ consensus_13653#2 ------------------------------------------------------------ consensus_13653#0 TGCAAGTTCTAAGTTAGATGTCAAGTTAGATGGAAGTCAAGCTCCAGGAATGCTGTCTGA 1560 consensus_13653#1 ------------------------------------------------------------ consensus_13653#2 ------------------------------------------------------------ consensus_13653#0 TGAACTTGCTAAGAGAAATCTGTTGAAGGGCATCACTGCTGACGAGAGTGCAACAGTACA 1620 consensus_13653#1 ------------------------------------------------------------ consensus_13653#2 ------------------------------------------------------------ consensus_13653#0 TGATACTGCTACTCTTGGTGTGGTGGTTGTGAAGCATTGTGGATACACAGCTGTTGTTCA 1680 consensus_13653#1 ------------------------------------------------------------ consensus_13653#2 ------------------------------------------------------------ consensus_13653#0 AGTTCCAGCAGATGCTCAACTGACAACTGTTTCTCTAGCACAACATGATATTGACATTGA 1740 consensus_13653#1 ------------------------------------------------------------ consensus_13653#2 ------------------------------------------------------------ consensus_13653#0 AGATCAGCCTGAAGGAGGTAGCAACGCACTGAATGTCAATAGCTTAAGGATGCTGCTTCA 1800 consensus_13653#1 --------------------------CTCGGAGTCCTAATGGC-----AACCCAGCATCT 29 consensus_13653#2 ------------------------------------------------------------ consensus_13653#0 TAAACCATGTATTCAACCATCTGGAGGAGTTCAGCGGTTGCAAAGTTCTCCTCATGGCCT 1860 consensus_13653#1 CCAAACG-GACCTCTAGCATCACCAGGTGG-CACTG-----AAGCTTCACCTCATGGCCT 82 consensus_13653#2 -------------------------------------------------ATACACAGCTG 11 ** ** consensus_13653#0 TCCTTCTCCCTCAGACAGTATAGTAGAATCAC--CTGCAACTGCATCTCCACAAGTTTCT 1918 consensus_13653#1 TCCTTCTCCCTCAGACAGTATAGTAGAATCAC--CTGCAACTGCATCTCCACAAGTTTCT 140 consensus_13653#2 TTGATCAAGTTCCAGCAG-ATGCTCAACTGACAACTGTTTCTCTAGCACAACATGATATT 70 * ** ** *** ** * * * ** *** ** * * * *** * * * consensus_13653#0 GAAATTAGCCAGACCAGTCCTGAAGGAAATGATACAACCAGTGGGGTCGATACTGAAAAT 1978 consensus_13653#1 GAAATTAGCCAGACCAGTCCTGAAGGAAATGATACAACCAGTGGGGTCGATACTGAAAAT 200 consensus_13653#2 GACATTGA--AGATCAG-CCTGAAGGAGGTATCAACGCACTGAATGTCAATAGCTTAAG- 126 ** *** *** *** ********* * * * *** *** ** consensus_13653#0 GGGAGTGAAAAACAGGACACTGATGGCAAGAACCATGTGGAAAGTAAAGACGGCGAAGGG 2038 consensus_13653#1 GGGAGTGAAAAACAGGACACTGATGGCAAGAACCATGTGGAAAGTAAAGACGGCGAAGGG 260 consensus_13653#2 GATGCTGCTTCATAAACCATGTATT-CAACCATCTGGAGGAGTTCAGCGGTTGC-AAAGT 184 * ** * * ** ** *** * * * *** * * ** ** * consensus_13653#0 GAGCCTGAGCAAACCGAAGCTTCCAAAGGTGATGGAGATGGTGCAATTACCCCGGAAGAT 2098 consensus_13653#1 GAGCCTGAGCAAACCGAAGCTTCCAAAGGTGATGGAGATGGTGCAATTACCCCGGAAGAT 320 consensus_13653#2 TCTCCTCAAGAGAGTGAATATAGTACAAATTTTGTCCGTAAGATAATGAC------AGAT 238 *** * * * *** * * * * ** * *** ** **** consensus_13653#0 GGTTCAGCCGTGACTGAAAATCCAAAGTCCTGGGCAGACTACAGTGATGGAGAAGCTGAG 2158 consensus_13653#1 GGTTCAGCCGTGACTGAAAATCCAAAGTCCTGGGCAGACTACAGTGATGGAGAAGCTGAG 380 consensus_13653#2 AGTCT-GCAGAAGCTTGAATGTGAAGCTCCAAGAGAAACAA----GACCAATAAGATGGG 293 ** ** * ** ** ** *** * * ** * ** * *** ** * consensus_13653#0 GCTGTTGAGGTTGCAAGCTGAGAAAAGATAAACCTTCTCAGTACACACAGAAAATTTTAC 2218 consensus_13653#1 GCTGTTGAGGTTGCAAGCTGAGAAAAGATAAACCTTCTCAGTACACACAGAAAATTTTAC 440 consensus_13653#2 AGCTTGGAGCTTGCTGGGTGC---AGCACCTACAGAATCAGACTTCTGAGAAGGCC--GA 348 * *** **** * ** * * ** **** * **** consensus_13653#0 CTCTTTTACAGATGAGACTTTTTCTTCTGGACAGCATACAAATGCAAAACCGGCACACTG 2278 consensus_13653#1 CTCTTTTACAGATGAGACTTTTTCTTCTGGACAGCATACAAATGCAAAACCGGCACACTG 500 consensus_13653#2 CACTAAGAAAAATGAGGAGACC----AAGGATGTTCCTACAGTGAAAGGTCTGGGGAA-A 403 * ** * * ***** *** * ** ** * * * consensus_13653#0 CTATTTTGTGTAGAGAATTAGTTCCTTTCCTGATCCATCTCATGGTATGTAGCATCTACA 2338 consensus_13653#1 CTATTTTGTGTAGAGAATTAGTTCCTTTCCTGATCCATCTCATGGTATGTAGCATCTACA 560 consensus_13653#2 CAGTTTGGTCAGCTGAAGGAGATCAA----GAAGAAGACAGATGATAAG-AGTGGAAA-A 457 * *** ** *** ** ** * * *** ** * ** * * consensus_13653#0 CGTGCTTCTGCAGTTCCAATGGCCTTGAAAGGT-TATGCAATGGCAGAGAACTTTGAAGA 2397 consensus_13653#1 CGTGCTTCTGCAGTTCCAATGGCCTTGAAAGGT-TATGCAATGGCAGAGAACTTTGAAGA 619 consensus_13653#2 GGTGCATCCACAAAAGAAAATACTTCGACAAATACAAATGATG-CGCAAACAGTCAACTC 516 **** ** ** ** * * ** * * * *** * * * * * consensus_13653#0 TCTCTTCCTGAGAGTGATCGATGAGCCCTTTTTTTCAGCTTGCTTTGCATTTGCTCCAAA 2457 consensus_13653#1 TCTCTTCCTGAGAGTGATCGATGAGCCCTTTTTTTCAGCTTGCTTTGCATTTGCTCCAAA 679 consensus_13653#2 TTCCAGCACAAAGGAGGATAATGAG----------------------------------- 541 * * * * * * ***** consensus_13653#0 GAAACTTGGGAAGAGCAAGCACACGAGAGATTGGTTAGCGCATATATACCATAGTTCATA 2517 consensus_13653#1 GAAACTTGGGAAGAGCAAGCACACGAGAGATTGGTTAGCGCATATATACCATAGTTCATA 739 consensus_13653#2 ------------------------------------------------------------ consensus_13653#0 GTCTTCCCTTTTTGCCTATCATTTTGTTCAACTTGTTATTATGTACTGGACCATCTGTCG 2577 consensus_13653#1 GTCTTCCCTTTTTGCCTATCATTTTGTTCAACTTGTTATTATGTACTGGACCATCTGTCG 799 consensus_13653#2 ------------------------------------------------------------ consensus_13653#0 ACATAACACATGTGAACTTATTTTTACTCTGAATTTTGATATATTAGAATTGTTGAACCA 2637 consensus_13653#1 ACATAACACATGTGAACTTATTTTTACTCTGAATTTTGATATATTAGAATTGTTGAACCA 859 consensus_13653#2 ------------------------------------------------------------ consensus_13653#0 TGTAAATTGTAAAGAAAGTGGTGCCTATTTGGCCTCTTGCTTGATGTGAATTTTACCCAA 2697 consensus_13653#1 TGTAAATTGTAAAGAAAGTGGTGCCTATTTGGCCTCTTGCTTGATGTGAATTTT------ 913 consensus_13653#2 ------------------------------------------------------------ consensus_13653#0 GATGAAAAAAAAGA 2711 consensus_13653#1 -------------- consensus_13653#2 -------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||