cluster # 13660

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Oryza sativa
cluster # 13660 cluster # 13660 Sequences # 13 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_13660#0 length = 2457 sequences # 12

consensus_13660#1 length = 479 sequences # 1

consensusID : consensus_13660#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 12
consensus length = 2457
fasta sequence

                              [GGGAAAATGGCGTCGTCCGTCGCCGCCGCCGCCGCACCGACCGCCGGGGGGCCGCCGGGGAAGCGGCAGGCCTCCGGCGGGCGGGAGGGAGACCAGCTCATCATCACTCCGCTGGGCGCCGGCAACGAGGTCGGCCGCTCCTGCGTCTACATGTCATTCAAGGGCCGCACCGTCCTCTTCGATTGCGGCATCCACCCGGCTTACTCCGGCATGGCGGCGCTCCCCTACTTCGATGAGATCGATCCCTCCACCATTGATGTCCTCCTAATCACCCACTTTCACTTGGACCATGCTGCCTCTCTTCCCTACTTCTTGGAGAAGACGACATTCAAGGGGCGCGTGTTCATGACCCATGCCACAAAGGCCATCTACAGGCTGCTCCTTTCCGATTATGTCAAAGTCAGCAAAGTTTCTGTGGAGGATATGCTGTTTGACGAGCAAGACATTCTTCGTTCCATGGATAAAATTGAGGTCATAGACTTCCACCAGACATTGGAAGTTAATGGCATACGCTTCTGGTGCTATACTGCTGGCCATGTACTTGGCGCTGCAATGTTCATGGTGGACATTGCTGGGGTTCGCGTTCTTTACACTGGTGACTACTCCCGTGAGGAAGATCGCCACCTGAAAGCTGCTGAACTTCCCCAGTTCTCCCCTGATATTTGCATTATCGAGTCAACTTATGGCGTGCAGCAGCACCAACCCCGCCATGTACGAGAGAAGCGCTTCACTGATGTAATACACACGACCGTCTCGCAGGGTGGTCGCGTTCTTATCCCAGCCTTTGCTCTTGGAAGAGCTCAAGAGCTGCTACTTATCCTGGATGAGTATTGGGCCAACCACCCAGAGCTCCATAAGATTCCAATCTATTATGCCTCCCCTCTTGCCAAGAAATGCATGGCTGTCTACCAGACATACATCAACTCCATGAATGAAAGGATTAGGAACCAGTTTGCACAATCTAATCCCTTCCATTTCAAGCATATTGAGTCTTTGAATAGCATAGATAACTTTCATGATGTGGGTCCATCAGTGGTTATGGCAAGCCCAGGTGGTCTCCAGAGTGGCCTCTCCAGGCAGCTCTTTGACAAATGGTGCACAGATAAGAAGAATTCATGTGTTATTCCAGGTTATGTTGTGGAAGGCACCCTTGCAAAGACCATTATTAACGAGCCAAGAGAAGTGACACTGGCGAATGGGCTCACTGCTCCTCTTCATATGCAGGTCCACTATATTTCCTTTTCTGCTCATGCTGATTTCCCTCAGACAAGCACCTTCTTGGATGAGCTCCAGCCACCCAACATTGTTCTTGTACACGGGGAAGCAAATGAGATGTCAAGACTTAAGCAGAAGCTTATTTCTCAGTTTGATGGGACAAATATAAAAGTTGTTAACCCCAAGAATTGCCAATCAGTGGAGATGTATTTCAGTTCTGAGAAAAT-GGCCAAGACAATTGGCAGGTT-GGCT-GAAAAGGTACCGGAAGCT-GGAGAATCAGTTAATGGCTTGCTTGTAAAGAAGGGATTCACATATCAAATTATGGCTCCTGAGGATCTCCGTGTGTACACGCAGCTATCTACAGCTAACATTACCCAAAGGATTGCCGTCCCATATTCTGGTTCTTTTGAAGTCATAAAGTACAGACTGAAGCAAATATATGAGAGCGTGGAGTCATCAACAGAGGAGTCTGATGTTCCAACATTGATTGTGCATGAGAGAGTGACCATTCGCCTGGAATCAGAAAGCTATGTTACATTGCAGTGGTCGTCTGATCCTATCAGTGATATGGTGTCTGATTCTGTGGTCGCCATGGTCTTGAACATAGGCCGTG-AAGGTCCCAAAGTTGTCCCAG-TTGAAGAAGCA-GTGAAGACACAGGAAGAGA-CGGAAAGGGTGGCCCAGAAGGTAG-TTTATGCTCTTATGG-TGTCACTTTTTGGTGATGTCAAAGTTGCAGAGGAAGGGAAACTTGTTATATCTGTGGATGGACAAGTAGCACA-CTTGGATGGGAGGAGTGGTGGTG-TTGAATGTGAAAAT-GCTACACTGAGAGAAAGGATCAAGACTGCATTCCGTCGTATACAGGGTGCTGTGAGACCAATCCCGCTTATATCTTCTTGAGCTGAAGGCGTTAAAGTTACGCTTAAACGTGTCCAATGTTTCCTAGATGAACTTAGTAGCATTACCTGTCTGCACATGATGAGCAGGCATTTTCATCCTGCTTCAAATGCCTGTCTAATACAGCATGATGTGTTGTAGATCACTGCTCTGGGCCATCTTAGTGCCGTTGAAATAAACT-CCAGCTGTAACATTTTGATTTTGTAGCCATTTCTAACTGTTACTCATTTCCTGTGAAATTGTTCTTAGCTTCAAAAAAAATTTCCAGATATTCTGTTTGCCTGCTATTCATTTGTCCAGTTGGTGATGTACTATGCAATCTTAATGGAAACTTTTGGGTCTCAAAAAAAA]

[+] EMBL AK100660             [GGGAAAATGGCGTCGTCCGTCGCCGCCGCCGCCGCACCGACCGCCGGGGGGCCGCCGGGGAAGCGGCAGGCCTCCGGCGGGCGGGAGGGAGACCAGCTCATCATCACTCCGCTGGGCGCCGGCAACGAGGTCGGCCGCTCCTGCGTCTACATGTCATTCAAGGGCCGCACCGTCCTCTTCGATTGCGGCATCCACCCGGCTTACTCCGGCATGGCGGCGCTCCCCTACTTCGATGAGATCGATCCCTCCACCATTGATGTCCTCCTAATCACCCACTTTCACTTGGACCATGCTGCCTCTCTTCCCTACTTCTTGGAGAAGACGACATTCAAGGGGCGCGTGTTCATGACCCATGCCACAAAGGCCATCTACAGGCTGCTCCTTTCCGATTATGTCAAAGTCAGCAAAGTTTCTGTGGAGGATATGCGGTTTGACGAGCAAGACATTCTTCGTTCCATGGATAAAATTGAGGTCATAGACTTCCACCAGACATTGGAAGTTAATGGCATACGCTTCTGGTGCTATACTGCTGGCCATGTACTTGGCGCTGCAATGTTCATGGTGGACATTGCTGGGGTTCGCGTTCTTTACACTGGTGACTACTCCCGTGAGGAAGATCGCCACCTGAAAGCTGCTGAACTTCCCCAGTTCTCCCCTGATATTTGCATTATCGAGTCAACTTATGGCGTGCAGCAGCACCAACCCCGCCATGTACGAGAGAAGCGCTTCACTGATGTAATACACACGACCGTCTCGCAGGGTGGTCGCGTTCTTATCCCAGCCTTTGCTCTTGGAAGAGCTCAAGAGCTGCTACTTATCCTGGATGAGTATTGGGCCAACCACCCAGAGCTCCATAAGATTCCAATCTATTATGCCTCCCCTCTTGCCAAGAAATGCATGGCTGTCTACCAGACATACATCAACTCCATGAATGAAAGGATTAGGAACCAGTTTGCACAATCTAATCCCTTCCATTTCAAGCATATTGAGTCTTTGAATAGCATAGATAACTTTCATGATGTGGGTCCATCAGTGGTTATGGCAAGCCCAGGTGGTCTCCAGAGTGGCCTCTCCAGGCAGCTCTTTGACAAATGGTGCACAGATAAGAAGAATTCATGTGTTATTCCAGGTTATGTTGTGGAAGGCACCCTTGCAAAGACCATTATTAACGAGCCAAGAGAAGTGACACTGGCGAATGGGCTCACTGCTCCTCTTCATATGCAGGTCCACTATATTTCCTTTTCTGCTCATGCTGATTTCCCTCAGACAAGCACCTTCTTGGATGAGCTCCAGCCACCCAACATTGTTCTTGTACACGGGGAAGCAAATGAGATGTCAAGACTTAAGCAGAAGCTTATTTCTCAGTTTGATGGGACAAATATAAAAGTTGTTAACCCCAAGAATTGCCAATCAGTGGAGATGTATTTCAGTTCTGAGAAAAT GGCCAAGACAATTGGCAGGTT GGCT GAAAAGGTACCGGAAGCT GGAGAATCAGTTAATGGCTTGCTTGTAAAGAAGGGATTCACATATCAAATTATGGCTCCTGAGGATCTCCGTGTGTACACGCAGCTATCTACAGCTAACATTACCCAAAGGATTGCCGTCCCATATTCTGGTTCTTTTGAAGTCATAAAGTACAGACTGAAGCAAATATATGAGAGCGTGGAGTCATCAACAGAGGAGTCTGATGTTCCAACATTGATTGTGCATGAGAGAGTGACCATTCGCCTGGAATCAGAAAGCTATGTTACATTGCAGTGGTCGTCTGATCCTATCAGTGATATGGTGTCTGATTCTGTGGTCGCCATGGTCTTGAACATAGGCCGTG AAGGTCCCAAAGTTGTCCCAG TTGAAGAAGCA GTGAAGACACAGGAAGAGA CGGAAAGGGTGGCCCAGAAGGTAG TTTATGCTCTTATGG TGTCACTTTTTGGTGATGTCAAAGTTGCAGAGGAAGGGAAACTTGTTATATCTGTGGATGGACAAGTAGCACA CTTGGATGGGAGGAGTGGTGGTG TTGAATGTGAAAAT GCTACACTGAGAGAAAGGATCAAGACTGCATTCCGTCGTATACAGGGTGCTGTGAGACCAATCCCGCTTATATCTTCTTGAGCTGAAGGCGTTAAAGTTACGCTTAAACGTGTCCAATGTTTCCTAGATGAACTTAGTAGCATTACCTGTCTGCACATGATGAGCAGGCATTTTCATCCTGCTTCAAATGCCTGTCTAATACAGCATGATGTGTTGTAGATCACTGCTCTGGGCCATCTTAGTGCCGTTGAAATAAACT CCAGCTGTAACATTTTGATTTTGTAGCCATTTCTAACTGTTACTCATTTCCTGTGAAATTGTTC                                                                                                          ]
[+] EMBL CB638999             [                                CGCACCGACCGCCGGGGGGCCGCCGGGGAAGCGGCAGGCCTCCGGCGGGCGGGAGGGAGACCAGCTCATCATCACTCCGCTGGGCGCCGGCAACGAGGTCGGCCGCTCCTGCGTCTACATGTCATTCAAGGGCCGCACCGTCCTCTTCGATTGCGGCATCCACCCGGCTTACTCCGGCATGGCGGCGCTCCCCTACTTCGATGAGATCGATCCCTCCACCATTGATGTCCTCCTAATCACCCACTTTCACTTGGACCATGCTGCCTCTCTTCCCTACTTCTTGGAGAAGACGACATTCAAGGGGCGCGTGTTCATGACCCATGCCACAAAGGCCATCTACAGGCTGCTCCTTTCCGATTATGTCAAAGTCAGCAAAGTTTCTGTGGAGGATATGCTGTTTGACGAGCAAGACATTCTTCGTTCCATGGATAAAATTGAGGTCATAGACTTCCACCAGACATTGGAAGTTAATGGCATACGCTTCTGGTGCTATACTGCTGGCCATGTACTTGGCGCTGCAATGTTCATGGTGGACATTGCTGGGGTTCGCGTTCTTTACACTGGTGACTACTCCCGTGAGGAAGATCGCCACCTGAAAGCTGCTGAACTTCCCCAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CB638265             [                                CGCACCGACCGCCGGGGGGCCGCCGGGGAAGCGGCAGGCCTCCGGCGGGCGGGAGGGAGACCAGCTCATCATCACTCCGCTGGGCGCCGGCAACGAGGTCGGCCGCTCCTGCGTCTACATGTCATTCAAGGGCCGCACCGTCCTCTTCGATTGCGGCATCCACCCGGCTTACTCCGGCATGGCGGCGCTCCCCTACTTCGATGAGATCGATCCCTCCACCATTGATGTCCTCCTAATCACCCACTTTCACTTGGACCATGCTGCCTCTCTTCCCTACTTCTTGGAGAAGACGACATTCAAGGGGCGCGTGTTCATGACCCATGCCACAAAGGCCATCTACAGGCTGCTCCTTTCCGATTATGTCAAAGTCAGCAAAGTTTCTGTGGAGGATATGCTGTTTGACGAGCAAGACATTCTTCGTTCCATGGATAAAATTGAGGTCATAGACTTCCACCAGACATTGGAAGTTAATGGCATACGCTTCTGGTGCTATACTGCTGGCCATGTACTTGGCGCTGCAATGTTCATGGTGGACATTGCTGGGGTTCGCGTTCTTTACACTGGTGACTACTCCCGTGAGGAAGATCGCCACCTGAAAGCTGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CF304378             [                                                                     GCCTCCGGCGGGCGGGAGGGAGACCAGCTCATCATCACTCCGCTGGGCGCCGGCAACGAGGTCGGCCGCTCCTGCGTCTACATGTCATTCAAGGGCCGCACCGTCCTCTTCGATTGCGGCATCCACCCGGCTTACTCCGGCATGGCGGCGCTCCCCTACTTCGATGAGATCGATCCCTCCACCATTGATGTCCTCCTAATCACCCACTTTCACTTGGACCATGCTGCCTCTCTTCCCTACTTCTTGGAGAAGACGACATTCAAGGGGCGCGTGTTCATGACCCATGCCACAAAGGCCATCTACAGGCTGCTCCTTTCCGATTATGTCAAAGTCAGCAAAGTTTCTGTGGAGGATATGCTGTTTGACGAGCAAGACATTCTTCGTTCCATGGATAAAATTGAGGTCATAGACTTCCACCAGACATTGGAAGTTAATGGCATACGCTTCTGGTGCTATACTGCTGGCCATGTACTTGGCGCTGCAATGTTCATGGTGGACATTGCTGGGGTTCGCGTTCTTTACACTGGTGACTACTCCCGTGAGGAAGATCGCCACCTGAAAGCTGCTGAACTTCCCCAGTTCTCCCCTGATATTTGCATTATCGAGTCAACT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CF324471             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TGGTGACTACTCCCGTGAGGAAGATCGCCACCTGAAAGCTGCTGAACTTCCCCAGTTCTCCCCTGATATTTGCATTATCGAGTCAACTTATGGCGTGCAGCAGCACCAACCCCGCCATGTACGAGAGAAGCGCTTCACTGATGTAATACACACGACCGTCTCGCAGGGTGGTCGCGTTCTTATCCCAGCCTTTGCTCTTGGAAGAGCTCAAGAGCTGCTACTTATCCTGGATGAGTATTGGGCCAACCACCCAGAGCTCCATAAGATTCCAATCTATTATGCCTCCCCTCTTGCCAAGAAATGCATGGCTGTCTACCAGACATACATCAACTCCATGAATGAAAGGATTAGGAACCAGTTTGCACAATCTAATCCCTTCCATTTCAAGCATATTGAGTCTTTGAATAGCATAGATAACTTTCATGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AU030813             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ATGTGTTATTCCAGGTTATGTTGTGGAAGGCACCCTTGCAAAGACCATTATTAACGAGCCAAGAGAAGTGACACTGGCGAATGGGCTCACTGCTCCTCTTCATATGCAGGTCCACTATATTTCCTTTTCTGCTCATGCTGATTTCCCTCAGACAAGCACCTTCTTGGATGAGCTCCAGCCACCCAACATTGTTCTTGTACACGGGGAAGCAAATGAGATGTCAAGACTTAAGCAGAAGCTTATTTCTCAGTTTGATGGGACAAATATAAAAGTTGTTAACCCCAAGAATTGCCAATCAGTGGAGATGTATTTCAGTTCTGAGAAAATGGGCCAAGACAATTGGCAGGTTGGGCTGGAAAAGGTACCGGAAGCTGGGAGAATCAGTTAATGGCTTGCTTGTAAAGAAGGGATTCACATATCCAATTATGGCTCCTGANGATCTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CA762087             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               aAGAGGAGTCTGATGTTCCAACATTGATTGTGCATGAGAGAGTGACCATTCGCTTGGAATCAGAAAGCTATGTTACATTGCAGTGGTCGTCTGATCCTATCAGTGATATGGTGTCTGATTCTGTGGTCGCCATGGTCTTGAACATAGGCCGTG AAGGTCCCAAAGTTGTCCCAG TTGAAGAAGCA GTGAAGACACAGGAAGAGA CGGAAAGGGTGGCCCAGAAGGTAG TTTATGCTCTTATGG TGTCACTTTTTGGTGATGTCAAAGTTGCAGAGGAAGGGAAACTTGTTATATCTGTGGATGGACAAGTAGCACA CTTGGATGGGAGGAGTGGTGATG TTGAATGTGAAAAT GCTACACTGAGAGAAAGGATCAAGACTGCATTCCGTTGTATACAGGGTGCTGTGAGACCAATCCCGCTTATATCTTCTTGAGCTGAAGGCGTTAAAGTTACGCTTAAACGTGTCCAATGTTTTTTAGATGAACTTAGTAGCATTACCTGTCTGCACATGATGAGCAGGCATTTTCATCTTGCTTCAAATGCCTGTCTAATACAGCATGATGTGTTGTAGATCACTGCTCTGGGCCATTTTAGTGCCGTTGAAATAAACT CCAGCTGTAACATTTTGATTTTGTAGCCATTTCTAACTGTTACTCATTTCCTGTGAAATTGTTTTTAGCTTCAAAAAAAA                                                                                          ]
[+] EMBL AU030814             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  AACATTGATTGTGCATGAGAGAGTGACCATTCGCCTGGAATCAGAAAGCTATGTTACATTGCAGTGGTCGTCTGATCCTATCAGTGATATGGTGTCTGATTCTGTGTTCGCCATGGTCTTGAACATAGGCCGTG AAGGTCCCAAAGTTGTCCCAG TTGAAGAAGCA GTGAAGACACAGGAAGAGA CGGAAAGGGTGGCCCAGAAGGTAG TTTATGCTCTTATGG TGTCACTTTTTGGTGATGTCAAAGTTGCAGAGGAAGGGAAACTTGTTATATCTGTGGATGGACAAGTAGCACA CTTGGATGGGAGGAGTGGTGGTG TTGAATGTGAAAAT GCTACACTGAGAGAAAGGATCAAGACTGCATTCCGTCGTATACAGGGTGCTGTGAGACCAATCCCGCTTATATCTTCTTGAGCTGAAGGCGTTAAAGTTACGCTTAAACGTGTCCAATGTTTCCTAGATGAACTTAGTAGCATTACCTGTCTGCACATGATGAGCAGGCATTTTCATCCTGCTTCAAATGCCTGTCTAATACAGCATGATGTGTTGTAGATCACTGCTCTGGGCCATCTTAGTGCCGTTGAAATAAACT CCAGCTGTAACATTTTGATTTTGTAGCCATTTCTAACTGTTACTCAaaaa                                                                                                                        ]
[-] EMBL CB638266             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TGACCATTCGCCTGGAATCAGAAAGCTATGTTACATTGCAGTGGTCGTCTGATCCTATCAGTGATATGGTGTCTGATTCTGTGGTCGCCATGGTCTTGAACATAGGCCGTG AAGGTCCCAAAGTTGTCCCAG TTGAAGAAGCA GTGAAGACACAGGAAGAGA CGGAAAGGGTGGCCCAGAAGGTAG TTTATGCTCTTATGG TGTCACTTTTTGGTGATGTCAAAGTTGCAGAGGAAGGGAAACTTGTTATATCTGTGGATGGACAAGTAGCACA CTTGGATGGGAGGAGTGGTGGTG TTGAATGTGAAAAT GCTACACTGAGAGAAAGGATCAAGACTGCATTCCGTCGTATACAGGGTGCTGTGAGACCAATCCCGCTTATATCTTCTTGAGCTGAAGGCGTTAAAGTTACGCTTAAACGTGTCCAATGTTTCCTAGATGAACTTAGTAGCATTACCTGTCTGCACATGATGAGCAGGCATTTTCATCCTGCTTCAAATGCCTGTCTAATACAGCATGATGTGTTGTAGATCACTGCTCTGGGCC TTTTAGTGCCGTTGAAATAAACT CCAGCTGTAAC TTAAGATTTTGTAGC                                                                                                                                               ]
[-] EMBL CB639000             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               AAGCTATGTTACATTGCAGTGGTCGTCTGATCCTATCAGTGATATGGTGTCTGATTCTGTGGTCGCCATGGTCTTGAACATAGGCCGTG AAGGTCCCAAAGTTGTCCCAG TTGAAGAAGCA GTGAAGACACAGGAAGAGA CGGAAAGGGTGGCCCAGAAGGTAG TTTATGCTCTTATGG TGTCACTTTTTGGTGATGTCAAAGTTGCAGAGGAAGGGAAACTTGTTATATCTGTGGATGGACAAGTAGCACA CTTGGATGGGAGGAGTGGTGGTG TTGAATGTGAAAAT GCTACACTGAGAGAAAGGATCAAGACTGCATTCCGTCGTATACAGGGTGCTGTGAGACCAATCCCGCTTATATCTTCTTGAGCTGAAGGCGTTAAAGTTACGCTTAAACGTGTCCAATGTTTCCTAGATGAACTTAGTAGCATTACCTGTCTGCACATGATGAGCAGGCATTTTCATCCTGCTTCAAATGCCTGTCTAATACAGCATGATGTGTTGTAGATCACTGCTCTGGGCCATCTTAGTGCCGTTGAAATAAACTCCCAGCTGTAACATTTTGAT                                                                                                                                                       ]
[+] EMBL BI808274             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ctGTGAAAGGTCCCCAAGTTGTCCCAGCTTGAAGAA CACGTGAAGACACAGGAAGAGACCGGAAAGGTTGCCCCAGAAGGTAGTTTTATGCTCTTATGGCTGTCACTTTTTGGTGATGTCAAAGTT CAGAGGAAGGGAAACTTGTTATATCTGTGGATGGACAAGTAGCACACCTTGGATGGGAGGATTGGTGATGCTTGAATGTGAAAATGGCTACACTGAGAGAAAGGATCAAGACTGCATTCCGTCGTATACAGGGT CTGTGAGACC ATCCCGCTTATATCTTCTTGAGCTGAAGGCGTTAAAGTTACGCTTAAACGTGTCCAATGTTTCCTAGATGAACTTAGTAGCATTACCTGTCTGCACATGATGA CAGGCATTTTCATCTTGCTTCAAATGCCTGTCTAATACAGCATGATGTGTTGTAGATCACTGCTCTGGGCCATCTTAGTGCCGTTGAAATAAACT CCAGCTGTAACATTTTGATTTTGTAGCCATTTCTAACTGTTAaaaaaaaaa                                                                                                                       ]
[+] EMBL AU091349             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CATCCTGCTTCAAATNCCTGTCTAATACAGCATGATGTGTTGTAGATCACTGCTCTGGGCCATCTTAGTGCCGTTGAAATAAACT CCAGCTGTAACATTTTGATTTTGTAGCCATTTCTAACTGTTACTCATTTCCTGTGAAATTGTTCTTAGCTTCTCTGTTCTTTTCCAGATATTCTGTTTGCCTGCTATTCATTTGTCCAGTTGGTGATGTACTATGCAATCTTAATGGAAACTTTTGGGTCTCAAAAAAAA]




>consensus_13660#0
GGGAAAATGGCGTCGTCCGTCGCCGCCGCCGCCGCACCGACCGCCGGGGGGCCGCCGGGG
AAGCGGCAGGCCTCCGGCGGGCGGGAGGGAGACCAGCTCATCATCACTCCGCTGGGCGCC
GGCAACGAGGTCGGCCGCTCCTGCGTCTACATGTCATTCAAGGGCCGCACCGTCCTCTTC
GATTGCGGCATCCACCCGGCTTACTCCGGCATGGCGGCGCTCCCCTACTTCGATGAGATC
GATCCCTCCACCATTGATGTCCTCCTAATCACCCACTTTCACTTGGACCATGCTGCCTCT
CTTCCCTACTTCTTGGAGAAGACGACATTCAAGGGGCGCGTGTTCATGACCCATGCCACA
AAGGCCATCTACAGGCTGCTCCTTTCCGATTATGTCAAAGTCAGCAAAGTTTCTGTGGAG
GATATGCTGTTTGACGAGCAAGACATTCTTCGTTCCATGGATAAAATTGAGGTCATAGAC
TTCCACCAGACATTGGAAGTTAATGGCATACGCTTCTGGTGCTATACTGCTGGCCATGTA
CTTGGCGCTGCAATGTTCATGGTGGACATTGCTGGGGTTCGCGTTCTTTACACTGGTGAC
TACTCCCGTGAGGAAGATCGCCACCTGAAAGCTGCTGAACTTCCCCAGTTCTCCCCTGAT
ATTTGCATTATCGAGTCAACTTATGGCGTGCAGCAGCACCAACCCCGCCATGTACGAGAG
AAGCGCTTCACTGATGTAATACACACGACCGTCTCGCAGGGTGGTCGCGTTCTTATCCCA
GCCTTTGCTCTTGGAAGAGCTCAAGAGCTGCTACTTATCCTGGATGAGTATTGGGCCAAC
CACCCAGAGCTCCATAAGATTCCAATCTATTATGCCTCCCCTCTTGCCAAGAAATGCATG
GCTGTCTACCAGACATACATCAACTCCATGAATGAAAGGATTAGGAACCAGTTTGCACAA
TCTAATCCCTTCCATTTCAAGCATATTGAGTCTTTGAATAGCATAGATAACTTTCATGAT
GTGGGTCCATCAGTGGTTATGGCAAGCCCAGGTGGTCTCCAGAGTGGCCTCTCCAGGCAG
CTCTTTGACAAATGGTGCACAGATAAGAAGAATTCATGTGTTATTCCAGGTTATGTTGTG
GAAGGCACCCTTGCAAAGACCATTATTAACGAGCCAAGAGAAGTGACACTGGCGAATGGG
CTCACTGCTCCTCTTCATATGCAGGTCCACTATATTTCCTTTTCTGCTCATGCTGATTTC
CCTCAGACAAGCACCTTCTTGGATGAGCTCCAGCCACCCAACATTGTTCTTGTACACGGG
GAAGCAAATGAGATGTCAAGACTTAAGCAGAAGCTTATTTCTCAGTTTGATGGGACAAAT
ATAAAAGTTGTTAACCCCAAGAATTGCCAATCAGTGGAGATGTATTTCAGTTCTGAGAAA
ATGGCCAAGACAATTGGCAGGTTGGCTGAAAAGGTACCGGAAGCTGGAGAATCAGTTAAT
GGCTTGCTTGTAAAGAAGGGATTCACATATCAAATTATGGCTCCTGAGGATCTCCGTGTG
TACACGCAGCTATCTACAGCTAACATTACCCAAAGGATTGCCGTCCCATATTCTGGTTCT
TTTGAAGTCATAAAGTACAGACTGAAGCAAATATATGAGAGCGTGGAGTCATCAACAGAG
GAGTCTGATGTTCCAACATTGATTGTGCATGAGAGAGTGACCATTCGCCTGGAATCAGAA
AGCTATGTTACATTGCAGTGGTCGTCTGATCCTATCAGTGATATGGTGTCTGATTCTGTG
GTCGCCATGGTCTTGAACATAGGCCGTGAAGGTCCCAAAGTTGTCCCAGTTGAAGAAGCA
GTGAAGACACAGGAAGAGACGGAAAGGGTGGCCCAGAAGGTAGTTTATGCTCTTATGGTG
TCACTTTTTGGTGATGTCAAAGTTGCAGAGGAAGGGAAACTTGTTATATCTGTGGATGGA
CAAGTAGCACACTTGGATGGGAGGAGTGGTGGTGTTGAATGTGAAAATGCTACACTGAGA
GAAAGGATCAAGACTGCATTCCGTCGTATACAGGGTGCTGTGAGACCAATCCCGCTTATA
TCTTCTTGAGCTGAAGGCGTTAAAGTTACGCTTAAACGTGTCCAATGTTTCCTAGATGAA
CTTAGTAGCATTACCTGTCTGCACATGATGAGCAGGCATTTTCATCCTGCTTCAAATGCC
TGTCTAATACAGCATGATGTGTTGTAGATCACTGCTCTGGGCCATCTTAGTGCCGTTGAA
ATAAACTCCAGCTGTAACATTTTGATTTTGTAGCCATTTCTAACTGTTACTCATTTCCTG
TGAAATTGTTCTTAGCTTCAAAAAAAATTTCCAGATATTCTGTTTGCCTGCTATTCATTT
GTCCAGTTGGTGATGTACTATGCAATCTTAATGGAAACTTTTGGGTCTCAAAAAAAA

consensusID : consensus_13660#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 479
fasta sequence

                              [CCGGGTCAGACACACGTCGTCCCGGTCACTTTTTTGGTGATGTCACAAGTGCGCAGAGGAAGGGAAACTTGTTATATCTGTGGATGGCACAAGTAGCACACTTGGATGGGAGGATTGGTGATTTGAATGTGAAAATGCTACCCTGAGAGAAAGGATCAAGACTGCATTCCGTCGTATACACGGGTGCTGTGAGACCCATCCCGCTTATATCTTCTTGAGCTGAAGGCGTTAAAGTTACGCTTGAAACGTGTGCCCATGGTTTGCCTAGATGGAACTTAGTACATTACCTGGTCTGGCACACTGGATGGACAGGCATTTTCATGCTTGGCTTCCAATGGCCTGTCTAATACACGCATGATGTGGTTGTAGATCACTGGCTCTGGGCCCATCCTTAGTGCCCGTTGGAAATAAACTCCAGCTGTAACACTTTTGATTTTGTACCCATTTCTAACTGTTACTCATTTCCTGTGAAAAAAAAA]

[+] EMBL BI798293             [CCGGGTCAGACACACGTCGTCCCGGTCACTTTTTTGGTGATGTCACAAGTGCGCAGAGGAAGGGAAACTTGTTATATCTGTGGATGGCACAAGTAGCACACTTGGATGGGAGGATTGGTGATTTGAATGTGAAAATGCTACCCTGAGAGAAAGGATCAAGACTGCATTCCGTCGTATACACGGGTGCTGTGAGACCCATCCCGCTTATATCTTCTTGAGCTGAAGGCGTTAAAGTTACGCTTGAAACGTGTGCCCATGGTTTGCCTAGATGGAACTTAGTACATTACCTGGTCTGGCACACTGGATGGACAGGCATTTTCATGCTTGGCTTCCAATGGCCTGTCTAATACACGCATGATGTGGTTGTAGATCACTGGCTCTGGGCCCATCCTTAGTGCCCGTTGGAAATAAACTCCAGCTGTAACACTTTTGATTTTGTACCCATTTCTAACTGTTACTCATTTCCTGTGAAAAAAAAA]




>consensus_13660#1
CCGGGTCAGACACACGTCGTCCCGGTCACTTTTTTGGTGATGTCACAAGTGCGCAGAGGA
AGGGAAACTTGTTATATCTGTGGATGGCACAAGTAGCACACTTGGATGGGAGGATTGGTG
ATTTGAATGTGAAAATGCTACCCTGAGAGAAAGGATCAAGACTGCATTCCGTCGTATACA
CGGGTGCTGTGAGACCCATCCCGCTTATATCTTCTTGAGCTGAAGGCGTTAAAGTTACGC
TTGAAACGTGTGCCCATGGTTTGCCTAGATGGAACTTAGTACATTACCTGGTCTGGCACA
CTGGATGGACAGGCATTTTCATGCTTGGCTTCCAATGGCCTGTCTAATACACGCATGATG
TGGTTGTAGATCACTGGCTCTGGGCCCATCCTTAGTGCCCGTTGGAAATAAACTCCAGCT
GTAACACTTTTGATTTTGTACCCATTTCTAACTGTTACTCATTTCCTGTGAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13660#0      GGGAAAATGGCGTCGTCCGTCGCCGCCGCCGCCGCACCGACCGCCGGGGGGCCGCCGGGG 60
consensus_13660#1      ------------------------------------------------------------
                                                                                   

consensus_13660#0      AAGCGGCAGGCCTCCGGCGGGCGGGAGGGAGACCAGCTCATCATCACTCCGCTGGGCGCC 120
consensus_13660#1      ------------------------------------------------------------
                                                                                   

consensus_13660#0      GGCAACGAGGTCGGCCGCTCCTGCGTCTACATGTCATTCAAGGGCCGCACCGTCCTCTTC 180
consensus_13660#1      ------------------------------------------------------------
                                                                                   

consensus_13660#0      GATTGCGGCATCCACCCGGCTTACTCCGGCATGGCGGCGCTCCCCTACTTCGATGAGATC 240
consensus_13660#1      ------------------------------------------------------------
                                                                                   

consensus_13660#0      GATCCCTCCACCATTGATGTCCTCCTAATCACCCACTTTCACTTGGACCATGCTGCCTCT 300
consensus_13660#1      ------------------------------------------------------------
                                                                                   

consensus_13660#0      CTTCCCTACTTCTTGGAGAAGACGACATTCAAGGGGCGCGTGTTCATGACCCATGCCACA 360
consensus_13660#1      ------------------------------------------------------------
                                                                                   

consensus_13660#0      AAGGCCATCTACAGGCTGCTCCTTTCCGATTATGTCAAAGTCAGCAAAGTTTCTGTGGAG 420
consensus_13660#1      ------------------------------------------------------------
                                                                                   

consensus_13660#0      GATATGCTGTTTGACGAGCAAGACATTCTTCGTTCCATGGATAAAATTGAGGTCATAGAC 480
consensus_13660#1      ------------------------------------------------------------
                                                                                   

consensus_13660#0      TTCCACCAGACATTGGAAGTTAATGGCATACGCTTCTGGTGCTATACTGCTGGCCATGTA 540
consensus_13660#1      ------------------------------------------------------------
                                                                                   

consensus_13660#0      CTTGGCGCTGCAATGTTCATGGTGGACATTGCTGGGGTTCGCGTTCTTTACACTGGTGAC 600
consensus_13660#1      ------------------------------------------------------------
                                                                                   

consensus_13660#0      TACTCCCGTGAGGAAGATCGCCACCTGAAAGCTGCTGAACTTCCCCAGTTCTCCCCTGAT 660
consensus_13660#1      ------------------------------------------------------------
                                                                                   

consensus_13660#0      ATTTGCATTATCGAGTCAACTTATGGCGTGCAGCAGCACCAACCCCGCCATGTACGAGAG 720
consensus_13660#1      ------------------------------------------------------------
                                                                                   

consensus_13660#0      AAGCGCTTCACTGATGTAATACACACGACCGTCTCGCAGGGTGGTCGCGTTCTTATCCCA 780
consensus_13660#1      ------------------------------------------------------------
                                                                                   

consensus_13660#0      GCCTTTGCTCTTGGAAGAGCTCAAGAGCTGCTACTTATCCTGGATGAGTATTGGGCCAAC 840
consensus_13660#1      ------------------------------------------------------------
                                                                                   

consensus_13660#0      CACCCAGAGCTCCATAAGATTCCAATCTATTATGCCTCCCCTCTTGCCAAGAAATGCATG 900
consensus_13660#1      ------------------------------------------------------------
                                                                                   

consensus_13660#0      GCTGTCTACCAGACATACATCAACTCCATGAATGAAAGGATTAGGAACCAGTTTGCACAA 960
consensus_13660#1      ------------------------------------------------------------
                                                                                   

consensus_13660#0      TCTAATCCCTTCCATTTCAAGCATATTGAGTCTTTGAATAGCATAGATAACTTTCATGAT 1020
consensus_13660#1      ------------------------------------------------------------
                                                                                   

consensus_13660#0      GTGGGTCCATCAGTGGTTATGGCAAGCCCAGGTGGTCTCCAGAGTGGCCTCTCCAGGCAG 1080
consensus_13660#1      ------------------------------------------------------------
                                                                                   

consensus_13660#0      CTCTTTGACAAATGGTGCACAGATAAGAAGAATTCATGTGTTATTCCAGGTTATGTTGTG 1140
consensus_13660#1      ------------------------------------------------------------
                                                                                   

consensus_13660#0      GAAGGCACCCTTGCAAAGACCATTATTAACGAGCCAAGAGAAGTGACACTGGCGAATGGG 1200
consensus_13660#1      ------------------------------------------------------------
                                                                                   

consensus_13660#0      CTCACTGCTCCTCTTCATATGCAGGTCCACTATATTTCCTTTTCTGCTCATGCTGATTTC 1260
consensus_13660#1      ------------------------------------------------------------
                                                                                   

consensus_13660#0      CCTCAGACAAGCACCTTCTTGGATGAGCTCCAGCCACCCAACATTGTTCTTGTACACGGG 1320
consensus_13660#1      ------------------------------------------------------------
                                                                                   

consensus_13660#0      GAAGCAAATGAGATGTCAAGACTTAAGCAGAAGCTTATTTCTCAGTTTGATGGGACAAAT 1380
consensus_13660#1      ------------------------------------------------------------
                                                                                   

consensus_13660#0      ATAAAAGTTGTTAACCCCAAGAATTGCCAATCAGTGGAGATGTATTTCAGTTCTGAGAAA 1440
consensus_13660#1      ------------------------------------------------------------
                                                                                   

consensus_13660#0      ATGGCCAAGACAATTGGCAGGTTGGCTGAAAAGGTACCGGAAGCTGGAGAATCAGTTAAT 1500
consensus_13660#1      ------------------------------------------------------------
                                                                                   

consensus_13660#0      GGCTTGCTTGTAAAGAAGGGATTCACATATCAAATTATGGCTCCTGAGGATCTCCGTGTG 1560
consensus_13660#1      ------------------------------------------------------------
                                                                                   

consensus_13660#0      TACACGCAGCTATCTACAGCTAACATTACCCAAAGGATTGCCGTCCCATATTCTGGTTCT 1620
consensus_13660#1      ------------------------------------------------------------
                                                                                   

consensus_13660#0      TTTGAAGTCATAAAGTACAGACTGAAGCAAATATATGAGAGCGTGGAGTCATCAACAGAG 1680
consensus_13660#1      ------------------------------------------------------------
                                                                                   

consensus_13660#0      GAGTCTGATGTTCCAACATTGATTGTGCATGAGAGAGTGACCATTCGCCTGGAATCAGAA 1740
consensus_13660#1      ------------------------------------------------------------
                                                                                   

consensus_13660#0      AGCTATGTTACATTGCAGTGGTCGTCTGATCCTATCAGTGATATGGTGTCTGATTCTGTG 1800
consensus_13660#1      ------------------------------------------------------------
                                                                                   

consensus_13660#0      GTCGCCATGGTCTTGAACATAGGCCGTGAAGGTCCCAAAGTTGTCCCAGTTGAAGAAGCA 1860
consensus_13660#1      ------------------------------------------------------------
                                                                                   

consensus_13660#0      GTGAAGACACAGGAAGAGACGGAAAGGGTGGCCCAGAAGGTAGTTTATGCTCTTATGGTG 1920
consensus_13660#1      ---------------------------------CCGGGTCAGACACACGTCGTCCCGGTC 27
                                                        * *          * *   *   *** 

consensus_13660#0      TCACTTTTTGGTGATGTCA-AAGT-TGCAGAGGAAGGGAAACTTGTTATATCTGTGGATG 1978
consensus_13660#1      AC-TTTTTTGGTGATGTCACAAGTGCGCAGAGGAAGGGAAACTTGTTATATCTGTGGATG 86
                        *  *************** ****  **********************************

consensus_13660#0      G-ACAAGTAGCACACTTGGATGGGAGGAGTGGTGGTGTTGAATGTGAAAATGCTACACTG 2037
consensus_13660#1      GCACAAGTAGCACACTTGGATGGGAGGATTGGTGAT-TTGAATGTGAAAATGCTACCCTG 145
                       * ************************** ***** * ******************* ***

consensus_13660#0      AGAGAAAGGATCAAGACTGCATTCCGTCGTATACA-GGGTGCTGTGAGACCAATCCCGCT 2096
consensus_13660#1      AGAGAAAGGATCAAGACTGCATTCCGTCGTATACACGGGTGCTGTGAGACCCATCCCGCT 205
                       *********************************** *************** ********

consensus_13660#0      TATATCTTCTTGAGCTGAAGGCGTTAAAGTTACGCTTAAA---CGTGTCCAATGTTT-CC 2152
consensus_13660#1      TATATCTTCTTGAGCTGAAGGCGTTAAAGTTACGCTTGAAACGTGTGCCCATGGTTTGCC 265
                       ************************************* **    *** ***  **** **

consensus_13660#0      TAGATG-AACTTAGTAGCATTACCTG-TCTG---CACATGATGAGCAGGCATTTTCATCC 2207
consensus_13660#1      TAGATGGAACTTAGTA-CATTACCTGGTCTGGCACACTGGATGGACAGGCATTTTCATGC 324
                       ****** ********* ********* ****   ***  ****  ************* *

consensus_13660#0      T--GCTTCAAATG-CCTGTCTAATACA-GCATGATGTG-TTGTAGATCACTG-CTCTGGG 2261
consensus_13660#1      TTGGCTTCCAATGGCCTGTCTAATACACGCATGATGTGGTTGTAGATCACTGGCTCTGGG 384
                       *  ***** **** ************* ********** ************* *******

consensus_13660#0      CCA--TCTTAGTGCC-GTTG-AAATAAACTCCAGCTGTAACA-TTTTGATTTTGTAGCCA 2316
consensus_13660#1      CCCATCCTTAGTGCCCGTTGGAAATAAACTCCAGCTGTAACACTTTTGATTTTGTACCCA 444
                       **    ********* **** ********************* ************* ***

consensus_13660#0      TTTCTAACTGTTACTCATTTCCTGTGAAATTGTTCTTAGCTTCAAAAAAAATTTCCAGAT 2376
consensus_13660#1      TTTCTAACTGTTACTCATTTCCTGTGAAAAAAAAA------------------------- 479
                       *****************************                               

consensus_13660#0      ATTCTGTTTGCCTGCTATTCATTTGTCCAGTTGGTGATGTACTATGCAATCTTAATGGAA 2436
consensus_13660#1      ------------------------------------------------------------
                                                                                   

consensus_13660#0      ACTTTTGGGTCTCAAAAAAAA 2457
consensus_13660#1      ---------------------