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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13667#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 2814 fasta sequence
[GGATTTGGTTTTGCTCTTTCTGTTGACCAAGCCACAGGCAGTTTGACATCAACACAGCAATTCCACTATTCGGACTATGATGTTGAGGATACAGCTTTACCTCTTCAACCATCTCTGAATTATACTGCACCAGAATTGGTCCGAAGTGGAGATTCTAAAGTTGGCTCGGCTTGTGACATATTTAGTTTTGGATGTCTAGCTTATCACCTGGTTGCTCGTAGACCACTTCTGGATTGCCATAACAATGTGAAAATGTATATGAATTCCTTGACGTATTTAACAAGTGAAGCCTTTTCTAATATTCCTGCTGATTTAGTGGTGGATTTGCAAAGGATGCTATCAGTTGATGTAGCATCACGCCCTAGTGCTATGGCGTTCACAGGCTCTTCCTTCTTCCGGAATGATACGCGGTTGCGTGCTCTTCGTTTCCTTGACCATTTGCTTGAGAGAGACAATATGCAGAAGACGGAGTTTCTGAAGGCATTATCGGATATGTGGAAGGACTTCGATTCCCGAGTTCTTCGGTATAAAGTTCTTCCACCTCTCTGTGCTGAGTTACGCAACATGGTCATGCAGCCAATGATTTTGCCCATGGTTCTAACAATAGCGGAATCTCAGGACAAAGGTGATTTTGAGCTTTCAACACTGCCGGCCCTTGTTCCGGTATTTACTTCAGCGTCAGGTGAAACACTTCTTTTGCTCGTGAAGCATGCGGATCTTATTATTCACAAGGCCACACAAGAGCATTTGATATCACATGTCCTTCCTATGCTGGTACGGGCTTATGATGACACTGATCCCCGACTACAGGAAGAAGTACTGCGACGGACAGTGCCATTGTCTCGTCAGCTTGACGTGAAGCTACTGAAACAGTCTGTTCTGCCACGCGTACATGGATTAGCCTTAAAGACTACAGTTGCTGCGGTGCGTGTAAATGCCTTGCGCTGTTTAGGGGATCTTGTTCCATCTTTGGATAAAGAAGGCATACTGGAGATCTTGCAAACTCTTCGGCGTTGTACAGCTGTTGACCACACCGCACCAACACTTATGTGCACCCTTGGAGTGGCTAATGCAATTTTTAAACAGTGTGGTGTTGAGTTTGCTGCGGAGTACGTGATTCCTCTCGTCTTCCCACTGCTCACAGCACATCAACTGAATGTACAGCAATTTGCTAAGTACATACTATTTGTCAAGGATATCACAAGCAAGATTGAGGAGAAGCGTGGTGTGACTGTTACAGATAATGGGAATACAGAGGTAAAAGTATCACCCTCATTGGCTAATGGGATTCATTCTGAGCCATTGTCACGAGGTGTGGGACAAACTGAACAGATACAAACTGCAAAGGGTGCTGCATGGGATGAGGACTGGGGCCCTACTAAGAAAGCAAGCACTCCATCACAGTCATCTGATTCCAATGCACGGATGAAGCAACCATCAGACCCTTTTGATTTCAGCACTCAAACAAAGCAACCCTCGGCACTTCCTTTTGATTTCAGTACTCAACAACCTAAGCCATCATCTGCAATCCCGCAAGTGACACCAGCTACAATTTCGCCTGCACCATCACTTCCATCACTGCAATCTCTTGCACCAAGCTCTGGACCCCAAACTTCTGGTTCATGTGTTCCTGTTGACATTGAGTGGCCTCCTAGAAAAAACACATCGTCTGACTTTAATGCACCATTATCTGTTAGTGAGCAAAGTAAATCTGGAGGGCTATCTAGTGATGGTCTTGCTGATATTGATCCTTTTGCCGACTGGCCCCCAAAAGCAAGCAGTGGTGCCAGCATTTTAGCTGTTGGACACCTGTCAAGCACAAGCCAAAGTATTTCTGGACTAAGTACAGGAAATATTGGGTTCAGTGGCAACAGTGGTTCTCTGGGACAAATGAAAACCAACCAAATGAGCTGGTCAGCGAAACCGAACACTACTAATTTAATGGCCGTGAACTCAACAGGCAATTACTTGAATCAGGGCAACTCAGCTCTTGGATTTGGAAATCCAATTGGAGGACGGAGTACAGGGTCATTGTCAAGCAGCACAACACAGGGTCCACCCAGGCTTGCTCCTCCTCCATCTGCTTCTGTTGGAAGAGGGCGTGGTAGAAATCAAGGGCAATCGGCACTTTCACGAGCATCACGTACTCCTCATTCCAATGTTTCATCAGAGCAGCCACCTA-TTCTAGATT-TA-CTGTAGCAATTGAGGGCCCTCTATCTTCGTTTTGCAAATGTTGAAGTTCCTATATGGTGAGCATCATGCCTTTTTTCTTCCCAACCTGCTTGCGGCAGTAGTGTATTTACATGTCAGTTTTGCAAACTGGATGGTCTGAG-ACTGAGGCCCCC-AAATGA-AGCTGCTTCAGAGCCTTCCAGAGGTTACAGAATGTTCCCTTTCTCAGGAGTCAGGATGTCTTCTTCCACACTTGGTCCTAGTTGGACAGGCGAAACAGGAGAAATTCTATTTGTGTATAATATATTTGTTCAGACGGCTGTAGATTGTAGAGTTCATGAATACAGTCAACATGTTTGTTGGGATGTTTTGAATGCCCAGAATGTGCCACCACTCCACCAGGTTTAATGGGCCTCGTGCAAATGGACCCAAGG-CGATTTACTCAGATACTCCCCTCCCCTACATGTAATTCATTTATTCTGTGAAGGCCCCATGTTGTGTAGTCCAGAAGTATAGGCCCATCAACACAACAGTAACCGTTGTCGATAGAAACCCGTGTCTTCTGTGAATTGTGATTAA-AGTTGTTGAGGGTGAACGTGCATTTCTTTTTTTTGGGTCAGGTCACCACCTTGACCATTAAGCGGC]
[+] EMBL AK105714 [GGATTTGGTTTTGCTCTTTCTGTTGACCAAGCCACAGGCAGTTTGACATCAACACAGCAATTCCACTATTCGGACTATGATGTTGAGGATACAGCTTTACCTCTTCAACCATCTCTGAATTATACTGCACCAGAATTGGTCCGAAGTGGAGATTCTAAAGTTGGCTCGGCTTGTGACATATTTAGTTTTGGATGTCTAGCTTATCACCTGGTTGCTCGTAGACCACTTCTGGATTGCCATAACAATGTGAAAATGTATATGAATTCCTTGACGTATTTAACAAGTGAAGCCTTTTCTAATATTCCTGCTGATTTAGTGGTGGATTTGCAAAGGATGCTATCAGTTGATGTAGCATCACGCCCTAGTGCTATGGCGTTCACAGGCTCTTCCTTCTTCCGGAATGATACGCGGTTGCGTGCTCTTCGTTTCCTTGACCATTTGCTTGAGAGAGACAATATGCAGAAGACGGAGTTTCTGAAGGCATTATCGGATATGTGGAAGGACTTCGATTCCCGAGTTCTTCGGTATAAAGTTCTTCCACCTCTCTGTGCTGAGTTACGCAACATGGTCATGCAGCCAATGATTTTGCCCATGGTTCTAACAATAGCGGAATCTCAGGACAAAGGTGATTTTGAGCTTTCAACACTGCCGGCCCTTGTTCCGGTATTTACTTCAGCGTCAGGTGAAACACTTCTTTTGCTCGTGAAGCATGCGGATCTTATTATTCACAAGGCCACACAAGAGCATTTGATATCACATGTCCTTCCTATGCTGGTACGGGCTTATGATGACACTGATCCCCGACTACAGGAAGAAGTACTGCGACGGACAGTGCCATTGTCTCGTCAGCTTGACGTGAAGCTACTGAAACAGTCTGTTCTGCCACGCGTACATGGATTAGCCTTAAAGACTACAGTTGCTGCGGTGCGTGTAAATGCCTTGCGCTGTTTAGGGGATCTTGTTCCATCTTTGGATAAAGAAGGCATACTGGAGATCTTGCAAACTCTTCGGCGTTGTACAGCTGTTGACCACACCGCACCAACACTTATGTGCACCCTTGGAGTGGCTAATGCAATTTTTAAACAGTGTGGTGTTGAGTTTGCTGCGGAGTACGTGATTCCTCTCGTCTTCCCACTGCTCACAGCACATCAACTGAATGTACAGCAATTTGCTAAGTACATACTATTTGTCAAGGATATCACAAGCAAGATTGAGGAGAAGCGTGGTGTGACTGTTACAGATAATGGGAATACAGAGGTAAAAGTATCACCCTCATTGGCTAATGGGATTCATTCTGAGCCATTGTCACGAGGTGTGGGACAAACTGAACAGATACAAACTGCAAAGGGTGCTGCATGGGATGAGGACTGGGGCCCTACTAAGAAAGCAAGCACTCCATCACAGTCATCTGATTCCAATGCACGGATGAAGCAACCATCAGACCCTTTTGATTTCAGCACTCAAACAAAGCAACCCTCGGCACTTCCTTTTGATTTCAGTACTCAACAACCTAAGCCATCATCTGCAATCCCGCAAGTGACACCAGCTACAATTTCGCCTGCACCATCACTTCCATCACTGCAATCTCTTGCACCAAGCTCTGGACCCCAAACTTCTGGTTCATGTGTTCCTGTTGACATTGAGTGGCCTCCTAGAAAAAACACATCGTCTGACTTTAATGCACCATTATCTGTTAGTGAGCAAAGTAAATCTGGAGGGCTATCTAGTGATGGTCTTGCTGATATTGATCCTTTTGCCGACTGGCCCCCAAAAGCAAGCAGTGGTGCCAGCATTTTAGCTGTTGGACACCTGTCAAGCACAAGCCAAAGTATTTCTGGACTAAGTACAGGAAATATTGGGTTCAGTGGCAACAGTGGTTCTCTGGGGCAAATGAAAACCAACCAAATGAGCTGGTCAGCGAAACCGAACACTACTAATTTAATGGCCGTGAACTCAACAGGCAATTACTTGAATCAGGGCAACTCAGCTCTTGGATTTGGAAATCCAATTGGAGGACGGAGTACAGGGTCATTGTCAAGCAGCACAACACAGGGTCCACCCAGGCTTGCTCCTCCTCCATCTGCTTCTGTTGGAAGAGGGCGTGGTAGAAATCAAGGGCAATCGGCACTTTCACGAGCATCACGTACTCCTCATTCCAATGTTTCATCAGAGCAGCCACCTA TTCTAGATT TA CTGTAGCAATTGAGGGCCCTCTATCTTCGTTTTGCAAATGTTGAAGTTCCTATATGGTGAGCATCATGCCTTTTTTCTTCCCAACCTGCTTGCGGCAGTAGTGTATTTACATGTCAGTTTTGCAAACTGGATGGTCTGAG ACTGAGGCCCCC AAATGA AGCTGCTTCAGAGCCTTCCAGAGGTTACAGAATGTTCCCTTTCTCAGGAGTCAGGATGTCTTCTTCCACACTTGGTCTTAGTTGGACAGGCGAAACAGGAGAAATTCTATTTGTGTATAATATATTTGTTCAGACGGCTGTAGATTGTAGAGTTCATGAATACAGTCAACATGTTTGTTGGGATGTTTTGAATGCCCAGAATGTGCCACCACTCCACCAGGTTTAATGGGCCTCGTGCAAATGGACCCAAGG CGATTTACTCAGATACTCCCCTCCCCTACATGTAATTCATTTATTCTGTGAAGGCCCCATGTTGTGTAGTCCAGAAGTATAGGCCCATCAACACAACAGTAACCGTTGTCGATAGAAACCCGTGTCTTCTGTGAATTGTGATTAA AGTT ]
[+] EMBL CB627830 [ TATGAATTCCTTGACGTATTTAACAAGTGAAGCCTTTTCTAATATTCCTGCTGATTTAGTGGTGGATTTGCAAAGGATGCTATCAGTTGATGTAGCATCACGCCCTAGTGCTATGGCGTTCACAGGCTCTTCCTTCTTCCGGAATGATACGCGGTTGCGTGCTCTTCGTTTCCTTGACCATTTGCTTGAGAGAGACAATATGCAGAAGACGGAGTTTCTGAAGGCATTATCGGATATGTGGAAGGACTTCGATTCCCGAGTTCTTCGGTATAAAGTTCTTCCACCTCTCTGTGCTGAGTTACGCAACATGGTCATGCAGCCAATGATTTTGCCCATGGTTCTAACAATAGCGGAATCTCAGGACAAAGGTGATTTTGAGCTTTCAACACTGCCGGCCCTTGTTCCGGTATTTACTTCAGCGTCAGGTGAAACACTTCTTTTGCTCGTGAAGCATGCGGATCTTATTATTCACAAGGCCACACAAGAGCATTTGATATCACATGTCCTTCCTATGCTGGTACGGGCTTATGATGACACTGATCCCCGACTACAGGAAGAAGTACTGCGACGGACAGTGCCATTGTCTCGTCAGCTTGACATGAAGCTACTGAAACAGTCTGTTCTGCCACGCGTACATGGATTAGCCTTAAAGACTACAGTTGCTGCGGTGCGTGTAAATGCCTTGCGCTGTTTAGGGGATCTTGTTCCATCTTTGGATAAAGAAGGCATACTGGAGATCTTGCAAACTCTTCGGCGTTGTACAGCTGTTGACCACACCGCACCAACACTTATGTGCACCC ]
[+] EMBL AK058983 [ ATGAAGCAACCATCAGACCCTTTTGATTTCAGCACTCAAACAAAGCAACCCTCGGCACTTCCTTTTGATTTCAGTACTCAACAACCTAAGCCATCATCTGCAATCCCGCAAGTGACACCAGCTACAATTTCGCCTGCACCATCACTTCCATCACTGCAATCTCTTGCACCAAGCTCTGGACCCCAAACTTCTGGTTCATGTGTTCCTGTTGACATTGAGTGGCCTCCTAGAAAAAACACATCGTCTGACTTTAATGCACCATTATCTGTTAGTGAGCAAAGTAAATCTGGAGGGCTATCTAGTGATGGTCTTGCTGATATTGATCCTTTTGCCGACTGGCCCCCAAAAGCAAGCAGTGGTGCCAGCATTTTAGCTGTTGGACACCTGTCAAGCACAAGCCAAAGTATTTCTGGACTAAGTACAGGAAATATTGGGTTCAGTGGCAACAGTGGTTCTCTGGAACAAATGAAAACCAACCAAATGAGCTGGTCAGCGAAACCGAACACTACTAATTTAATGGCCGTGAACTCAACAGGCAATTACTTGAATCAGGGCAACTCAGCTCTTGGATTTGGAAATCCAATTGGAGGACGGAGTACAGGGTCATTGTCAAGCAGCACAACACAGGGTCCACCCAGGCTTGCTCCTCCTCCATCTGCTTCTGTTGGAAGAGGGCGTGGTAGAAATCAAGGGCAATCGGCACTTTCACGAGCATCACGTACTCCTCATTCCAATGTTTCATCAGAGCAGCCACCTA TTCTAGATT TA CTGTAGCAATTGAGGGCCCTCTATCTTCGTTTTGCAAATGTTGAAGTTCCTATATGGTGAGCATCATGCCTTTTTTCTTCCCAACCTGCTTGCGGCAGTAGTGTATTTACATGTCAGTTTTGCAAACTGGATGGTCTGAG ACTGAGGCCCCC AAATGA AGCTGCTTCAGAGCCTTCCAGAGGTTACAGAATGTTCCCTTTCTCAGGAGTCAGGATGTCTTCTTCCACACTTGGTCCTAGTTGGACAGGCGAAACAGGAGAAATTCTATTTGTGTATAATATATTTGTTCAGACGGCTGTAGATTGTAGAGTTCATGAATACAGTCAACATGTTTGTTG ]
[-] EMBL CB627831 [ CAAGCAGTGGTGCCAGCATTTCAGCTGTTGGACACCTGTCAAGCACAAGCCAAAGTATTTCT GACTAAGTACAGGAAATATTGGGTTCAGTGGCAACAGTGGTTCTCTGGGACAAATGAAAACCAACCAAATGAGCTGGTCAGCGAAACCGAACACTACTAATTTAATGGCCGTGAACTCAACAGGCAATTACTTGAATCAGGGCAACTCAGCTCTTGGATTTGGAAATCCAATTGGAGGACGGAGTACAGGGTCATTGTCAAGCAGCACAACACAGGGTCCACCCAGGCTTGCTCCTCCTCCATCTGCTTCTGTTGGAAGAGGGCGTGGTAGAAATCAAGGGCAATCGGCACTTTCACGAGCATCACGTACTCCTCATTCCAATGTTTCATCAGAGCAGCCACCTA TTCTAGATT TA CTGTAGCAATTGAGGGCCCTCTATCTTCGTTTTGCAAATGTTGAAGTTCCTATATGGTGAGCATCATGCC TTTTTCTTCCCAACCTGCTTGCGGCAGTAGTGTATTTACATGTCAGTTTTGCAAACTGGATGGTCTGAG ACTGAGGCCCCC AAATGA AGCTGCTTCAGAGCCTTCCAGAGGTTACAGAATGTTCCCTTTCTCAGGAGTCAGGATGTCTTCTTCCACACTTGGTCCTAGTTGGACAGGCGAAACAGGAGAAATTCTATTTGTGTATAATATATTTGTTCAGACGGCTGTAGATTGTAGAGTTCATGAATACAGTCAACATGTTTGTTGGGATGTTTTGAATGCCCAGAATGTGCCACCACTCCACCAGGTTTAATGGGCCTCGTGCAAATGGACCCAAGG TGATTTACT ]
[+] EMBL CF313941 [ TTCAGTGGCAACAGTGGTTCTCTGGGACAAATGAAAACCAACCAAATGAGCTGGTCAGCGAAACCGAACACTACTAATTTAATGGCCGTGAACTCAACAGGCAATTACTTGAATCAGGGCAACTCAGCTCTTGGATTTGGAAATCCAATTGGAGGACGGAGTACAGGGTCATTGTCAAGCAGCACAACACAGGGTCCACCCAGGCTTGCTCCTCCTCCATCTGCTTCTGTTGGAAGAGGGCGTGGTAGAAATCAAGGGCAATCGGCACTTTCACGAGCATCACGTACTCCTCATTCCAATGTTTCATCAGAGCAGCCACCTA TTCTAGATT TA CTGTAGCAATTGAGGGCCCTCTATCTTCGTTTTGCAAATGTTGAAGTTCCTATATGGTGAGCATCATGCCTTTTTTCTTCCCAACCTGCTTGCGGCAGTAGTGTATTTACATGTCAGTTTTGCAAACTGGATGGTCTGAG ACTGAGGCCCCC AAATGA AGCTGCTTCAGAGCCTTCCAGAGGTTACAGAATGTTCCCTTTCTCAGGAGTCAGGATGTCTTCTTCCACACTTGGTCCTAGTTGGA ]
[-] EMBL CB678801 [ TTACTTGAATCAGGGCAACTCAGCTCTGGGATTTGGAAATCCAATTGGAGGACGGAGTACAGGGTCATTGTCAAGCAGCACAACACAGGGTCCACCCAGGCTTGCTCCTCCTCCATCTGCTTCTGTTGGAAGAGGGCGTGGTAGAAATCAAGGGCAATCGGCACTTTCACGAGCATCACGTACTCCTCATTCCAATGTTTCATCAGAGCAGCCACCTA TTCTAGATT TA CTGTAGCAATTGAGGGCCCTCTATCTTCGTTTTGCAAATGTTGAAGTTCCTATATGGTGAGCATCATGCCTTTTTTCTTCCCAACCTGCTTGCGGCAGTAGTGTATTTACATGTCAGTTTTGCAAACTGGATGGTCTGAG ACTGAGGCCCCC AAATGA AGCTGCTTCAGAGCCTTCCAGAGGTTACAGAATGTTCCCTTTCTCAGGAGTCAGGATGTCTTCTTCCACACTTGGTCCTAGTTGGACAGGCGAAACAGGAGAAATTCTATTTGTGTATAATATATTTGTTCAGACGGCTGTAGATTGTAGAGTTCATGAATACAGTCAACATGTTTGTTGGGATGTTTTGAATGCCCAGAATGTGCCACCACTCCACCAGGTTTAATGGGCCTCGTGCAAATGGACCCAAGG CGATTTACTCAGATACTCCCCTCCCCTACATGTAATTCATTTATTCTGTGAAGGCCCCATGTTGTGTAGTCCAGAAGTATAGGCCCATCAACACAACAGTAACCGTTGTCGATAGAAACCCGTGTCTTCTGTGAATTGTGATTAA AGTTGTTGAGGGTGAACGTG ]
[-] EMBL CB678799 [ CTCAGCTCTTGGATTTGGAAATCCAATTGGAGGACGGAGTACAGGGTCATTGTCAAGCAGCACAACACAGGGTCCACCCAGGCTTGCTCCTCCTCCATCTGCTTCTGTTGGAAGAGGGCGTGGTAGAAATCAAGGGCAATCGGCACTTTCACGAGCATCACGTACTCCTCATTCCAATGTTTCATCAGAGCAGCCACCTA TTCTAGATT TA CTGTAGCAATTGAGGGCCCTCTATCTTCGTTTTGCAAATGTTGAAGTTCCTATATGGTGAGCATCATGCCTTTTTTCTTCCCAACCTGCTTGCGGCAGTAGTGTATTTACATGTCAGTTTTGCAAACTGGATGGTCTGAG ACTGAGGCCCCC AAATGA AGCTGCTTCAGAGCCTTCCAGAGGTTACAGAATGTTCCCTTTCTCAGGAGTCAGGATGTCTTCTTCCACACTTGGTCCTAGTTGGACAGGCGAAACAGGAGAAATTCTATTTGTGTATAATATATTTGTTCAGACGGCTGTAGATTGTAGAGTTCATGAATACAGTCAACATGTTTGTTGGGATGTTTTGAATGCCCAGAATGTGCCACCACTCCACCAGGTTTAATGGGCCTCGTGCAAATGGACCCAAGG CGATTTACTCAGATACTCCCCTCCCCTACATGTAATTCATTTATTCTGTGAAGGCCCCATGTTGTGTAGTCCAGAAGTATAGGCCCATCAACACAACAGTAACCGTTGTCGATAGAAACCCGTGTCTTCTGTGAATTGTGATTAA AGTTGTTGAGGGTGAACGTG ]
[-] EMBL CB675371 [ AATCGGCACTTTCACGAGCATCATGTACTCCTCATTCCAATGTTTCATCAGAGCAGCCACCTA TTTTAGATT TA CTGTAGCAATTGAGGGCCCTCTATCTTCGTTTTGCAAATGTGGAAGTTCCTATATGGTGAGCATCATGCCTTTTTTTTTCCCAACCTGCTTGGGGCAGTAGTGTATTTACATGTCAGTTTTGCAAACTGGATGGTTTGAG ACTGAGGCCCCC AAATGA AGCTGCTTCAGAGCCTTCCAGAGGTTACAGAATGTTCCCTTTTTCAGGAGTCAGGATGTTTTCTTCCACACTTGGTCTTAGTTGGACAGGCGAAACAGGAGAAATTTTATTGGTGTATAATATATTTGTTCAGACGGCTGTAGATTGTAGAGTTCAGGAATACAGTCAACATGTTGGTGGGGATGTTTTGAATGCCCAGAATGTGCCACCACTCCACCAGTTTTAATGGGCCTGGTGCAAATGGACCCAAGG GGATTTATTCAGATACTCCCCTCCCCTACAGGTAATTCATTTATTCGGGGAAGGCCCCATGTTGTGTAGTCCAGAAGTATAGGCCCATAAACACAACAGTAACCGTTGTCGATAGAAACCCGTGTCTTCGGTGAATTGTGATTAA AGTTGTGGGGGG ]
[+] EMBL BI805978 [ CCACCTAGTNCTAGATTGTATCTGTAGCAATTGAGGGCCCTCTATCTTCGTTTTGCAAATGTTGAAGTTCCTATATGGTGAGCATCATGGCCNTTTTCNTCCCAACCNGCTTGCGGCAGTAGTGTATTTACATGTCAGTTTTGCAAACTGGATGGTCTGAGTTCTGAGGCCCCCTAAATGANAGCTGCTTCAGAGCCTTCCAGAGGTTACAGAATGTTCCCTTTCTCAGGAGTCAGGATGTCTTCTTCCACACTTGGTCCTAGTTGGACAGGCGAAACAGGAGAAATTCTATTTGTGTATAATATATTTGTTCAGACGGCTGTAGATTGTAGAGTTCATGAATACAGTCAACATGTTTGTTGGGATGTTTTGAATGCCCAGAATGTGCCACCACNCCACCAGGTTTAATGGGCCTCGTGCAAATGGACCCAAGG TGATTTACTCAaaa ]
[-] EMBL CF313940 [ TAGCAATTGAGGGCCCTCTATCTTCGTTTTGCAAATGTTGAAGTTCCTATATGGTGAGCATCATGCCTTTTTTCTTCCCAACCTGCTTGCGGCAGTAGTGTATTTACATGTCAGTTTTGCAAACTGGATGGTCTGAG ACTGAGGCCCCC AAATGA AGCTGCTTCAGAGCCTTCCAGAGGTTACAGAATGTTCCCTTTCTCAGGAGTCAGGATGTCTTCTTCCACACTTGGTCCTAGTTGGACAGGCGAAACAGGAGAAATTCTATTTGTGTATAATATATTTGTTCAGACGGCTGTAGATTGTAGAGTTCATGAATACAGTCAACATGTTTGTTGGGATGTTTTGAATGCCCAGAATGTGCCACCACTCCACCAGGTTTAATGGGCCTCGTGCAAATGGACCCAAGG CGATTTACTCAGATACTCCCCTCCCCTACATGTAATTCATTTATTCTGTGAAGGCCCCATGTTGTGTAGTCCAGAAGTATAGGCCCATCAACACAACAGTAACCGTTGTCGATAaa ]
[-] EMBL AU225197 [ AGGATGTCTTCTTCCACACTTGGTCGTAGTTGGACAGGCGAGACAGGAGAAATTCTATTTGTGTATAATATATTTGTTCAGACGGCTGTAGATTGTAGAGTTCATGAATACAGTCAACATGTTTGTTGGGATGTTTTGAATGCCCAGAATGTGCCACCACTCCACCAGGTTTAATGGGCCTCGTGCAAATGGACCCAAGGTCGATTTACTCAGATACTCCCCTCCCCTACATGTAATTCATTTATTCTGTGAAGGCCCCATGTTGTGTAGTCCAGAAGTATAGGCCCATCAACACAACAGTAACCGTTGTCGATAGAAACCCGTGTCTTCTGTGAATTGTGATTAATAGTTGTTGAGGGTGAACGTGCATTTCTTTTTTTTGGGTCAGGTCACCACCTTGACCATTAAGCGGC]
consensusID : consensus_13667#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 784 fasta sequence
[GGCATTATCGGATATGTGGAAGGACTTCGATTCCCGAGTTCTTCGGTATAAAGTTCTTCCACCTCTCTGTGCTGAGTTACGCAACATGGTCATGCAGCCAATGATTTTGCCCATGGTTCTAACAATAGCGGAATCTCAGGACAAAGGTGATTTTGAGCTTTCAACACTGCCGGCCCTTGTTCCGGTATTTACTTCAGCGTCAGGTGAAACACTTCTTTTGCTCGTGAAGCATGCGGATCTTATTATTCACAAGGCCACACAAGAGCATTTGATATCACATGTCCTTCCTATGCTGGTACGGGCTTATGATGACACTGATCCCCGACTACAGGAAGAAGTACTGCGACGGACAGTGCCATTGTCTCGTCAGCTTGACGTGAAGCTACTGAAACAGTCTGTTCTGCCACGCGTACATGGATTAGCCTTAAAGACTACAGTTGCTGCGGTATGCATAATACATGTTTTAGTTTTATAATTTGGGTACTTTATGTGTCAGATTGTACCATATTAATACACATTAAAACACACAAATAGCATGTATGATAAAACAACTTTTTTTTTAAAAAAGAATAATTAAAAGGGAAAACTCCTGTCTCGTTTGCACATAAAATAAATAAACAGAAATATAAGAGCCATGAGATGTTGAGTGTATGGTTTTTCTATGTAGCTACTCCATCCTATAGCTTGTTATTGATCAAGAGTGTTAAGATCTTAGATGTTAGTGTCACTATAGTGCTATTATATAATTCTTCTGTATTTTATCACCCCCTATTATAATCCCGCC]
[+] EMBL CB678800 [GGCATTATCGGATATGTGGAAGGACTTCGATTCCCGAGTTCTTCGGTATAAAGTTCTTCCACCTCTCTGTGCTGAGTTACGCAACATGGTCATGCAGCCAATGATTTTGCCCATGGTTCTAACAATAGCGGAATCTCAGGACAAAGGTGATTTTGAGCTTTCAACACTGCCGGCCCTTGTTCCGGTATTTACTTCAGCGTCAGGTGAAACACTTCTTTTGCTCGTGAAGCATGCGGATCTTATTATTCACAAGGCCACACAAGAGCATTTGATATCACATGTCCTTCCTATGCTGGTACGGGCTTATGATGACACTGATCCCCGACTACAGGAAGAAGTACTGCGACGGACAGTGCCATTGTCTCGTCAGCTTGACGTGAAGCTACTGAAACAGTCTGTTCTGCCACGCGTACATGGATTAGCCTTAAAGACTACAGTTGCTGCGGTATGCATAATACATGTTTTAGTTTTATAATTTGGGTACTTTATGTGTCAGATTGTACCATATTAATACACATTAAAACACACAAATAGCATGTATGATAAAACAACTTTTTTTTTAAAAAAGAATAATTAAAAGGGAAAACTCCTGTCTCGTTTGCACATAAAATAAATAAACAGAAATATAAGAGCCATGAGATGTTGAGTGTATGGTTTTTCTATGTAGCTACTCCATCCTATAGCTTGTTATTGATCAAGAGTGTTAAGATCTTAGATGTTAGTGTCACTATAGTGCTATTATATAATTCTTCTGTATTTTATCACCCCCTATTATAATCCCGCC]
consensusID : consensus_13667#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 480 fasta sequence
[GTTCTGAGACTGAGCCCCCCAAATGAACCTGCTTCAGACCCTTCCCAGAGGTTACAGAATGTNCCCTTTCTCCAGGAGTCAGGATGTCTTCTGTCCACACCTTGGTCCTAGTTGGACAGGCGAAACCNGGAGAAATTCTATTTGTGTATAATATATTTGTTCCAGACGGCTGTAGATTGTAGAGTTCCACTGAATACACGTCCAACATGTTTTTGGGATGTTTTGAATGCCCCAGAATGTCCCACCACCTCCACCAGGTTTAATGGGCCTCGTGCAAATGGGACCCCAGGTGATTTACTCAGATACTCCCCTCCCCTACATGTAATTCATTTATTCTGTGAAGGCCCCACTGTTGTGTAGTCCACGAAGTATAGCCCCAATCAACACACACACGTAACCGTTGTCCGATAGAAACCCATGTCTTCTGTGAATTGTGATTAAAGTTCTTCGAGGGTGAACCGTCCATTTCTTTTAAAAAAA]
[+] EMBL BM421732 [GTTCTGAGACTGAGCCCCCCAAATGAACCTGCTTCAGACCCTTCCCAGAGGTTACAGAATGTNCCCTTTCTCCAGGAGTCAGGATGTCTTCTGTCCACACCTTGGTCCTAGTTGGACAGGCGAAACCNGGAGAAATTCTATTTGTGTATAATATATTTGTTCCAGACGGCTGTAGATTGTAGAGTTCCACTGAATACACGTCCAACATGTTTTTGGGATGTTTTGAATGCCCCAGAATGTCCCACCACCTCCACCAGGTTTAATGGGCCTCGTGCAAATGGGACCCCAGGTGATTTACTCAGATACTCCCCTCCCCTACATGTAATTCATTTATTCTGTGAAGGCCCCACTGTTGTGTAGTCCACGAAGTATAGCCCCAATCAACACACACACGTAACCGTTGTCCGATAGAAACCCATGTCTTCTGTGAATTGTGATTAAAGTTCTTCGAGGGTGAACCGTCCATTTCTTTTAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_13667#0 GGATTTGGTTTTGCTCTTTCTGTTGACCAAGCCACAGGCAGTTTGACATCAACACAGCAA 60
consensus_13667#2 ------------------------------------------------------------
consensus_13667#1 ------------------------------------------------------------
consensus_13667#0 TTCCACTATTCGGACTATGATGTTGAGGATACAGCTTTACCTCTTCAACCATCTCTGAAT 120
consensus_13667#2 ------------------------------------------------------------
consensus_13667#1 ------------------------------------------------------------
consensus_13667#0 TATACTGCACCAGAATTGGTCCGAAGTGGAGATTCTAAAGTTGGCTCGGCTTGTGACATA 180
consensus_13667#2 ------------------------------------------------------------
consensus_13667#1 ------------------------------------------------------------
consensus_13667#0 TTTAGTTTTGGATGTCTAGCTTATCACCTGGTTGCTCGTAGACCACTTCTGGATTGCCAT 240
consensus_13667#2 ------------------------------------------------------------
consensus_13667#1 ------------------------------------------------------------
consensus_13667#0 AACAATGTGAAAATGTATATGAATTCCTTGACGTATTTAACAAGTGAAGCCTTTTCTAAT 300
consensus_13667#2 ------------------------------------------------------------
consensus_13667#1 ------------------------------------------------------------
consensus_13667#0 ATTCCTGCTGATTTAGTGGTGGATTTGCAAAGGATGCTATCAGTTGATGTAGCATCACGC 360
consensus_13667#2 ------------------------------------------------------------
consensus_13667#1 ------------------------------------------------------------
consensus_13667#0 CCTAGTGCTATGGCGTTCACAGGCTCTTCCTTCTTCCGGAATGATACGCGGTTGCGTGCT 420
consensus_13667#2 ------------------------------------------------------------
consensus_13667#1 ------------------------------------------------------------
consensus_13667#0 CTTCGTTTCCTTGACCATTTGCTTGAGAGAGACAATATGCAGAAGACGGAGTTTCTGAAG 480
consensus_13667#2 ------------------------------------------------------------
consensus_13667#1 ------------------------------------------------------------
consensus_13667#0 GCATTATCGGATATGTGGAAGGACTTCGATTCCCGAGTTCTTCGGTATAAAGTTCTTCCA 540
consensus_13667#2 ------------------------------------------------------------
consensus_13667#1 ------------------------------------------------------------
consensus_13667#0 CCTCTCTGTGCTGAGTTACGCAACATGGTCATGCAGCCAATGATTTTGCCCATGGTTCTA 600
consensus_13667#2 ------------------------------------------------------------
consensus_13667#1 ------------------------------------------------------------
consensus_13667#0 ACAATAGCGGAATCTCAGGACAAAGGTGATTTTGAGCTTTCAACACTGCCGGCCCTTGTT 660
consensus_13667#2 ------------------------------------------------------------
consensus_13667#1 ------------------------------------------------------------
consensus_13667#0 CCGGTATTTACTTCAGCGTCAGGTGAAACACTTCTTTTGCTCGTGAAGCATGCGGATCTT 720
consensus_13667#2 ------------------------------------------------------------
consensus_13667#1 ------------------------------------------------------------
consensus_13667#0 ATTATTCACAAGGCCACACAAGAGCATTTGATATCACATGTCCTTCCTATGCTGGTACGG 780
consensus_13667#2 ------------------------------------------------------------
consensus_13667#1 ------------------------------------------------------------
consensus_13667#0 GCTTATGATGACACTGATCCCCGACTACAGGAAGAAGTACTGCGACGGACAGTGCCATTG 840
consensus_13667#2 ------------------------------------------------------------
consensus_13667#1 ------------------------------------------------------------
consensus_13667#0 TCTCGTCAGCTTGACGTGAAGCTACTGAAACAGTCTGTTCTGCCACGCGTACATGGATTA 900
consensus_13667#2 ------------------------------------------------------------
consensus_13667#1 ------------------------------------------------------------
consensus_13667#0 GCCTTAAAGACTACAGTTGCTGCGGTGCGTGTAAATGCCTTGCGCTGTTTAGGGGATCTT 960
consensus_13667#2 ------------------------------------------------------------
consensus_13667#1 ------------------------------------------------------------
consensus_13667#0 GTTCCATCTTTGGATAAAGAAGGCATACTGGAGATCTTGCAAACTCTTCGGCGTTGTACA 1020
consensus_13667#2 ------------------------------------------------------------
consensus_13667#1 ------------------------------------------------------------
consensus_13667#0 GCTGTTGACCACACCGCACCAACACTTATGTGCACCCTTGGAGTGGCTAATGCAATTTTT 1080
consensus_13667#2 ------------------------------------------------------------
consensus_13667#1 ------------------------------------------------------------
consensus_13667#0 AAACAGTGTGGTGTTGAGTTTGCTGCGGAGTACGTGATTCCTCTCGTCTTCCCACTGCTC 1140
consensus_13667#2 ------------------------------------------------------------
consensus_13667#1 ------------------------------------------------------------
consensus_13667#0 ACAGCACATCAACTGAATGTACAGCAATTTGCTAAGTACATACTATTTGTCAAGGATATC 1200
consensus_13667#2 ------------------------------------------------------------
consensus_13667#1 ------------------------------------------------------------
consensus_13667#0 ACAAGCAAGATTGAGGAGAAGCGTGGTGTGACTGTTACAGATAATGGGAATACAGAGGTA 1260
consensus_13667#2 ------------------------------------------------------------
consensus_13667#1 ------------------------------------------------------------
consensus_13667#0 AAAGTATCACCCTCATTGGCTAATGGGATTCATTCTGAGCCATTGTCACGAGGTGTGGGA 1320
consensus_13667#2 ------------------------------------------------------------
consensus_13667#1 ------------------------------------------------------------
consensus_13667#0 CAAACTGAACAGATACAAACTGCAAAGGGTGCTGCATGGGATGAGGACTGGGGCCCTACT 1380
consensus_13667#2 ------------------------------------------------------------
consensus_13667#1 ------------------------------------------------------------
consensus_13667#0 AAGAAAGCAAGCACTCCATCACAGTCATCTGATTCCAATGCACGGATGAAGCAACCATCA 1440
consensus_13667#2 ------------------------------------------------------------
consensus_13667#1 ------------------------------------------------------------
consensus_13667#0 GACCCTTTTGATTTCAGCACTCAAACAAAGCAACCCTCGGCACTTCCTTTTGATTTCAGT 1500
consensus_13667#2 ------------------------------------------------------------
consensus_13667#1 ------------------------------------------------------------
consensus_13667#0 ACTCAACAACCTAAGCCATCATCTGCAATCCCGCAAGTGACACCAGCTACAATTTCGCCT 1560
consensus_13667#2 ------------------------------------------------------------
consensus_13667#1 ------------------------------------------------------------
consensus_13667#0 GCACCATCACTTCCATCACTGCAATCTCTTGCACCAAGCTCTGGACCCCAAACTTCTGGT 1620
consensus_13667#2 ------------------------------------------------------------
consensus_13667#1 ------------------------------------------------------------
consensus_13667#0 TCATGTGTTCCTGTTGACATTGAGTGGCCTCCTAGAAAAAACACATCGTCTGACTTTAAT 1680
consensus_13667#2 ------------------------------------------------------------
consensus_13667#1 ------------------------------------------------------------
consensus_13667#0 GCACCATTATCTGTTAGTGAGCAAAGTAAATCTGGAGGGCTATCTAGTGATGGTCTTGCT 1740
consensus_13667#2 ------------------------------------------------------------
consensus_13667#1 ------------------------------------------------------------
consensus_13667#0 GATATTGATCCTTTTGCCGACTGGCCCCCAAAAGCAAGCAGTGGTGCCAGCATTTTAGCT 1800
consensus_13667#2 ------------------------------------------------------------
consensus_13667#1 ------------------------------------------------------------
consensus_13667#0 GTTGGACACCTGTCAAGCACAAGCCAAAGTATTTCTGGACTAAGTACAGGAAATATTGGG 1860
consensus_13667#2 ------------------------------------------------------------
consensus_13667#1 ------------------------------------------------------------
consensus_13667#0 TTCAGTGGCAACAGTGGTTCTCTGGGACAAATGAAAACCAACCAAATGAGCTGGTCAGCG 1920
consensus_13667#2 ------------------------------------------------------------
consensus_13667#1 ------------------------------------------------------------
consensus_13667#0 AAACCGAACACTACTAATTTAATGGCCGTGAACTCAACAGGCAATTACTTGAATCAGGGC 1980
consensus_13667#2 ------------------------------------------------------------
consensus_13667#1 ------------------------------------------------------------
consensus_13667#0 AACTCAGCTCTTGGATTTGGAAATCCAATTGGAGGACGGAGTACAGGGTCATTGTCAAGC 2040
consensus_13667#2 ------------------------------------------------------------
consensus_13667#1 ------------------------------------------------------------
consensus_13667#0 AGCACAACACAGGGTCCACCCAGGCTTGCTCCTCCTCCATCTGCTTCTGTTGGAAGAGGG 2100
consensus_13667#2 ------------------------------------------------------------
consensus_13667#1 ------------------------------------------------------------
consensus_13667#0 CGTGGTAGAAATCAAGGGCAATCGGCACTTTCACGAGCATCACGTACTCCTCATTCCAAT 2160
consensus_13667#2 ------------------------------------------------------------
consensus_13667#1 ------------------------------------------------------------
consensus_13667#0 GTTTCATCAGAGCAGCCACCTATTCTAGATTTACTGTAGCAATTGAGGGCCCTCTATCTT 2220
consensus_13667#2 ------------------------------------------------------------
consensus_13667#1 ------------------------------------------------------------
consensus_13667#0 CGTTTTGCAAATGTTGAAGTTCCTATATGGTGAGCATCATGCCTTTTTTCTTCCCAACCT 2280
consensus_13667#2 ------------------------------------------------------------
consensus_13667#1 ------------------------------------------GGCATTATCGGATATGTG 18
consensus_13667#0 GCTTGCGGCAGTAGTGTATTTACATGTCAGTTTTGCAAACTGGATGGTCTGAGACTGAGG 2340
consensus_13667#2 ---------------------------------------------GTTCTGAGACTGAGC 15
consensus_13667#1 GAAGGACTTCGATTCCCGAGTTCTTCGGTATAAAGTTCTTCCACCTCTCTGTG-CTGAGT 77
**** * *****
consensus_13667#0 CCCCCAA-ATGAAGCTGCTTCAGAG--CCTTCC-AGAGGTTACAGAATGTTCCCTTTCTC 2396
consensus_13667#2 CCCCCAA-ATGAACCTGCTTCAGAC--CCTTCCCAGAGGTTACAGAATGTNCCCTTTCTC 72
consensus_13667#1 TACGCAACATGGTCATGCAGCCAATGATTTTGCCCATGGTTCTAACAATAGCGGAATCTC 137
* *** *** *** * * ** * **** * * * ****
consensus_13667#0 -AGGAGTCAGGATGTCTT---CT-TCCACAC---------TTGGTCC--TAGTTGGACAG 2440
consensus_13667#2 CAGGAGTCAGGATGTCTT---CTGTCCACACC--------TTGGTCC--TAGTTGGACAG 119
consensus_13667#1 -AGGACAAAGGTGATTTTGAGCTTTCAACACTGCCGGCCCTTGTTCCGGTATTTACTTCA 196
**** *** * ** ** ** **** *** *** ** **
consensus_13667#0 GCGAAAC-AGGAGAAATTCTATTTGT-GTATAATATATTTGTTC-AGACGGCTGTAGATT 2497
consensus_13667#2 GCGAAACCNGGAGAAATTCTATTTGT-GTATAATATATTTGTTCCAGACGGCTGTAGATT 178
consensus_13667#1 GCGTCAGGTGAAACACTTCTTTTGCTCGTGAAGCATGCGGATCTTATTATTCACAAGGCC 256
*** * * * * **** ** * ** * ** * * * **
consensus_13667#0 GTAGAGTTCA--TGAATA-CAG--TCAACATGTTTGTTGGGATG--TTTTGAATGCCC-A 2549
consensus_13667#2 GTAGAGTTCCACTGAATA-CACGTCCAACATGTTT-TTGGGATG--TTTTGAATGCCCCA 234
consensus_13667#1 ACACAAGAGCATTTGATATCACATGTCCTTCCTATGCTGGTACGGGCTTATGATGACACT 316
* * * *** ** * * *** * * ** *** *
consensus_13667#0 GAATGTGCCACCAC-TCCACCAGGTTTAATGGGCCTCGTGCAAATGG-ACCCAAGGC--- 2604
consensus_13667#2 GAATGTCCCACCACCTCCACCAGGTTTAATGGGCCTCGTGCAAATGGGACCCCAGGT--- 291
consensus_13667#1 GA-TCCCCGACTACAGGAAGAAGTACTGCGACGGACAGTGCCATTGTCTCGTCAGCTTGA 375
** * * ** ** * ** * * **** * ** * **
consensus_13667#0 ----GATTTACTCAGATACTCCCCTCCCCTACATGTAATTCATTTATTCTGTGAAGGCCC 2660
consensus_13667#2 ----GATTTACTCAGATACTCCCCTCCCCTACATGTAATTCATTTATTCTGTGAAGGCCC 347
consensus_13667#1 CGTGAAGCTACTGAAACAGTCTGTTCTGCCACGCGTACATGGATTAGCCT-TAAAGACTA 434
* **** * * * ** ** * ** *** * *** ** * *** *
consensus_13667#0 CA--TGTTGTGTAGTCCA-GAAGTATAGGCCCA-TCAACACA-ACA-GTAACCGTTGTC- 2713
consensus_13667#2 CAC-TGTTGTGTAGTCCACGAAGTATAGCCCCAATCAACACACACACGTAACCGTTGTCC 406
consensus_13667#1 CAGTTGCTGCGGTATGCATAATACATGTTTTAGTTTTATA-ATTTGGGTACTTTATGTGT 493
** ** ** * * ** * ** * * * * *** ***
consensus_13667#0 GATAGAAACCCGTGTCTTCTGTGAATTGTGAT---TAAAGTTGTT-GAGGGTGAAC-GTG 2768
consensus_13667#2 GATAGAAACCCATGTCTTCTGTGAATTGTGAT---TAAAGTTCTTCGAGGGTGAACCGTC 463
consensus_13667#1 CAGATTGTACCATAT-TAATACACATTAAAACACACAAATAGCATGTATGATAAAACAAC 552
* * ** * * * * *** * *** * * * * **
consensus_13667#0 CATTTCTTTTTTTTGGGTCAGGTCACCACCTTGACCATTAAGCGGC-------------- 2814
consensus_13667#2 CATTTCTTTTAAAAAAA------------------------------------------- 480
consensus_13667#1 TTTTTTTTTAAAAAAGAATAATTAAAAGGGAAAACTCCTGTCTCGTTTGCACATAAAATA 612
*** ***
consensus_13667#0 ------------------------------------------------------------
consensus_13667#2 ------------------------------------------------------------
consensus_13667#1 AATAAACAGAAATATAAGAGCCATGAGATGTTGAGTGTATGGTTTTTCTATGTAGCTACT 672
consensus_13667#0 ------------------------------------------------------------
consensus_13667#2 ------------------------------------------------------------
consensus_13667#1 CCATCCTATAGCTTGTTATTGATCAAGAGTGTTAAGATCTTAGATGTTAGTGTCACTATA 732
consensus_13667#0 ----------------------------------------------------
consensus_13667#2 ----------------------------------------------------
consensus_13667#1 GTGCTATTATATAATTCTTCTGTATTTTATCACCCCCTATTATAATCCCGCC 784
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||