These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13667#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 2814 fasta sequence [GGATTTGGTTTTGCTCTTTCTGTTGACCAAGCCACAGGCAGTTTGACATCAACACAGCAATTCCACTATTCGGACTATGATGTTGAGGATACAGCTTTACCTCTTCAACCATCTCTGAATTATACTGCACCAGAATTGGTCCGAAGTGGAGATTCTAAAGTTGGCTCGGCTTGTGACATATTTAGTTTTGGATGTCTAGCTTATCACCTGGTTGCTCGTAGACCACTTCTGGATTGCCATAACAATGTGAAAATGTATATGAATTCCTTGACGTATTTAACAAGTGAAGCCTTTTCTAATATTCCTGCTGATTTAGTGGTGGATTTGCAAAGGATGCTATCAGTTGATGTAGCATCACGCCCTAGTGCTATGGCGTTCACAGGCTCTTCCTTCTTCCGGAATGATACGCGGTTGCGTGCTCTTCGTTTCCTTGACCATTTGCTTGAGAGAGACAATATGCAGAAGACGGAGTTTCTGAAGGCATTATCGGATATGTGGAAGGACTTCGATTCCCGAGTTCTTCGGTATAAAGTTCTTCCACCTCTCTGTGCTGAGTTACGCAACATGGTCATGCAGCCAATGATTTTGCCCATGGTTCTAACAATAGCGGAATCTCAGGACAAAGGTGATTTTGAGCTTTCAACACTGCCGGCCCTTGTTCCGGTATTTACTTCAGCGTCAGGTGAAACACTTCTTTTGCTCGTGAAGCATGCGGATCTTATTATTCACAAGGCCACACAAGAGCATTTGATATCACATGTCCTTCCTATGCTGGTACGGGCTTATGATGACACTGATCCCCGACTACAGGAAGAAGTACTGCGACGGACAGTGCCATTGTCTCGTCAGCTTGACGTGAAGCTACTGAAACAGTCTGTTCTGCCACGCGTACATGGATTAGCCTTAAAGACTACAGTTGCTGCGGTGCGTGTAAATGCCTTGCGCTGTTTAGGGGATCTTGTTCCATCTTTGGATAAAGAAGGCATACTGGAGATCTTGCAAACTCTTCGGCGTTGTACAGCTGTTGACCACACCGCACCAACACTTATGTGCACCCTTGGAGTGGCTAATGCAATTTTTAAACAGTGTGGTGTTGAGTTTGCTGCGGAGTACGTGATTCCTCTCGTCTTCCCACTGCTCACAGCACATCAACTGAATGTACAGCAATTTGCTAAGTACATACTATTTGTCAAGGATATCACAAGCAAGATTGAGGAGAAGCGTGGTGTGACTGTTACAGATAATGGGAATACAGAGGTAAAAGTATCACCCTCATTGGCTAATGGGATTCATTCTGAGCCATTGTCACGAGGTGTGGGACAAACTGAACAGATACAAACTGCAAAGGGTGCTGCATGGGATGAGGACTGGGGCCCTACTAAGAAAGCAAGCACTCCATCACAGTCATCTGATTCCAATGCACGGATGAAGCAACCATCAGACCCTTTTGATTTCAGCACTCAAACAAAGCAACCCTCGGCACTTCCTTTTGATTTCAGTACTCAACAACCTAAGCCATCATCTGCAATCCCGCAAGTGACACCAGCTACAATTTCGCCTGCACCATCACTTCCATCACTGCAATCTCTTGCACCAAGCTCTGGACCCCAAACTTCTGGTTCATGTGTTCCTGTTGACATTGAGTGGCCTCCTAGAAAAAACACATCGTCTGACTTTAATGCACCATTATCTGTTAGTGAGCAAAGTAAATCTGGAGGGCTATCTAGTGATGGTCTTGCTGATATTGATCCTTTTGCCGACTGGCCCCCAAAAGCAAGCAGTGGTGCCAGCATTTTAGCTGTTGGACACCTGTCAAGCACAAGCCAAAGTATTTCTGGACTAAGTACAGGAAATATTGGGTTCAGTGGCAACAGTGGTTCTCTGGGACAAATGAAAACCAACCAAATGAGCTGGTCAGCGAAACCGAACACTACTAATTTAATGGCCGTGAACTCAACAGGCAATTACTTGAATCAGGGCAACTCAGCTCTTGGATTTGGAAATCCAATTGGAGGACGGAGTACAGGGTCATTGTCAAGCAGCACAACACAGGGTCCACCCAGGCTTGCTCCTCCTCCATCTGCTTCTGTTGGAAGAGGGCGTGGTAGAAATCAAGGGCAATCGGCACTTTCACGAGCATCACGTACTCCTCATTCCAATGTTTCATCAGAGCAGCCACCTA-TTCTAGATT-TA-CTGTAGCAATTGAGGGCCCTCTATCTTCGTTTTGCAAATGTTGAAGTTCCTATATGGTGAGCATCATGCCTTTTTTCTTCCCAACCTGCTTGCGGCAGTAGTGTATTTACATGTCAGTTTTGCAAACTGGATGGTCTGAG-ACTGAGGCCCCC-AAATGA-AGCTGCTTCAGAGCCTTCCAGAGGTTACAGAATGTTCCCTTTCTCAGGAGTCAGGATGTCTTCTTCCACACTTGGTCCTAGTTGGACAGGCGAAACAGGAGAAATTCTATTTGTGTATAATATATTTGTTCAGACGGCTGTAGATTGTAGAGTTCATGAATACAGTCAACATGTTTGTTGGGATGTTTTGAATGCCCAGAATGTGCCACCACTCCACCAGGTTTAATGGGCCTCGTGCAAATGGACCCAAGG-CGATTTACTCAGATACTCCCCTCCCCTACATGTAATTCATTTATTCTGTGAAGGCCCCATGTTGTGTAGTCCAGAAGTATAGGCCCATCAACACAACAGTAACCGTTGTCGATAGAAACCCGTGTCTTCTGTGAATTGTGATTAA-AGTTGTTGAGGGTGAACGTGCATTTCTTTTTTTTGGGTCAGGTCACCACCTTGACCATTAAGCGGC] [+] EMBL AK105714 [GGATTTGGTTTTGCTCTTTCTGTTGACCAAGCCACAGGCAGTTTGACATCAACACAGCAATTCCACTATTCGGACTATGATGTTGAGGATACAGCTTTACCTCTTCAACCATCTCTGAATTATACTGCACCAGAATTGGTCCGAAGTGGAGATTCTAAAGTTGGCTCGGCTTGTGACATATTTAGTTTTGGATGTCTAGCTTATCACCTGGTTGCTCGTAGACCACTTCTGGATTGCCATAACAATGTGAAAATGTATATGAATTCCTTGACGTATTTAACAAGTGAAGCCTTTTCTAATATTCCTGCTGATTTAGTGGTGGATTTGCAAAGGATGCTATCAGTTGATGTAGCATCACGCCCTAGTGCTATGGCGTTCACAGGCTCTTCCTTCTTCCGGAATGATACGCGGTTGCGTGCTCTTCGTTTCCTTGACCATTTGCTTGAGAGAGACAATATGCAGAAGACGGAGTTTCTGAAGGCATTATCGGATATGTGGAAGGACTTCGATTCCCGAGTTCTTCGGTATAAAGTTCTTCCACCTCTCTGTGCTGAGTTACGCAACATGGTCATGCAGCCAATGATTTTGCCCATGGTTCTAACAATAGCGGAATCTCAGGACAAAGGTGATTTTGAGCTTTCAACACTGCCGGCCCTTGTTCCGGTATTTACTTCAGCGTCAGGTGAAACACTTCTTTTGCTCGTGAAGCATGCGGATCTTATTATTCACAAGGCCACACAAGAGCATTTGATATCACATGTCCTTCCTATGCTGGTACGGGCTTATGATGACACTGATCCCCGACTACAGGAAGAAGTACTGCGACGGACAGTGCCATTGTCTCGTCAGCTTGACGTGAAGCTACTGAAACAGTCTGTTCTGCCACGCGTACATGGATTAGCCTTAAAGACTACAGTTGCTGCGGTGCGTGTAAATGCCTTGCGCTGTTTAGGGGATCTTGTTCCATCTTTGGATAAAGAAGGCATACTGGAGATCTTGCAAACTCTTCGGCGTTGTACAGCTGTTGACCACACCGCACCAACACTTATGTGCACCCTTGGAGTGGCTAATGCAATTTTTAAACAGTGTGGTGTTGAGTTTGCTGCGGAGTACGTGATTCCTCTCGTCTTCCCACTGCTCACAGCACATCAACTGAATGTACAGCAATTTGCTAAGTACATACTATTTGTCAAGGATATCACAAGCAAGATTGAGGAGAAGCGTGGTGTGACTGTTACAGATAATGGGAATACAGAGGTAAAAGTATCACCCTCATTGGCTAATGGGATTCATTCTGAGCCATTGTCACGAGGTGTGGGACAAACTGAACAGATACAAACTGCAAAGGGTGCTGCATGGGATGAGGACTGGGGCCCTACTAAGAAAGCAAGCACTCCATCACAGTCATCTGATTCCAATGCACGGATGAAGCAACCATCAGACCCTTTTGATTTCAGCACTCAAACAAAGCAACCCTCGGCACTTCCTTTTGATTTCAGTACTCAACAACCTAAGCCATCATCTGCAATCCCGCAAGTGACACCAGCTACAATTTCGCCTGCACCATCACTTCCATCACTGCAATCTCTTGCACCAAGCTCTGGACCCCAAACTTCTGGTTCATGTGTTCCTGTTGACATTGAGTGGCCTCCTAGAAAAAACACATCGTCTGACTTTAATGCACCATTATCTGTTAGTGAGCAAAGTAAATCTGGAGGGCTATCTAGTGATGGTCTTGCTGATATTGATCCTTTTGCCGACTGGCCCCCAAAAGCAAGCAGTGGTGCCAGCATTTTAGCTGTTGGACACCTGTCAAGCACAAGCCAAAGTATTTCTGGACTAAGTACAGGAAATATTGGGTTCAGTGGCAACAGTGGTTCTCTGGGGCAAATGAAAACCAACCAAATGAGCTGGTCAGCGAAACCGAACACTACTAATTTAATGGCCGTGAACTCAACAGGCAATTACTTGAATCAGGGCAACTCAGCTCTTGGATTTGGAAATCCAATTGGAGGACGGAGTACAGGGTCATTGTCAAGCAGCACAACACAGGGTCCACCCAGGCTTGCTCCTCCTCCATCTGCTTCTGTTGGAAGAGGGCGTGGTAGAAATCAAGGGCAATCGGCACTTTCACGAGCATCACGTACTCCTCATTCCAATGTTTCATCAGAGCAGCCACCTA TTCTAGATT TA CTGTAGCAATTGAGGGCCCTCTATCTTCGTTTTGCAAATGTTGAAGTTCCTATATGGTGAGCATCATGCCTTTTTTCTTCCCAACCTGCTTGCGGCAGTAGTGTATTTACATGTCAGTTTTGCAAACTGGATGGTCTGAG ACTGAGGCCCCC AAATGA AGCTGCTTCAGAGCCTTCCAGAGGTTACAGAATGTTCCCTTTCTCAGGAGTCAGGATGTCTTCTTCCACACTTGGTCTTAGTTGGACAGGCGAAACAGGAGAAATTCTATTTGTGTATAATATATTTGTTCAGACGGCTGTAGATTGTAGAGTTCATGAATACAGTCAACATGTTTGTTGGGATGTTTTGAATGCCCAGAATGTGCCACCACTCCACCAGGTTTAATGGGCCTCGTGCAAATGGACCCAAGG CGATTTACTCAGATACTCCCCTCCCCTACATGTAATTCATTTATTCTGTGAAGGCCCCATGTTGTGTAGTCCAGAAGTATAGGCCCATCAACACAACAGTAACCGTTGTCGATAGAAACCCGTGTCTTCTGTGAATTGTGATTAA AGTT ] [+] EMBL CB627830 [ TATGAATTCCTTGACGTATTTAACAAGTGAAGCCTTTTCTAATATTCCTGCTGATTTAGTGGTGGATTTGCAAAGGATGCTATCAGTTGATGTAGCATCACGCCCTAGTGCTATGGCGTTCACAGGCTCTTCCTTCTTCCGGAATGATACGCGGTTGCGTGCTCTTCGTTTCCTTGACCATTTGCTTGAGAGAGACAATATGCAGAAGACGGAGTTTCTGAAGGCATTATCGGATATGTGGAAGGACTTCGATTCCCGAGTTCTTCGGTATAAAGTTCTTCCACCTCTCTGTGCTGAGTTACGCAACATGGTCATGCAGCCAATGATTTTGCCCATGGTTCTAACAATAGCGGAATCTCAGGACAAAGGTGATTTTGAGCTTTCAACACTGCCGGCCCTTGTTCCGGTATTTACTTCAGCGTCAGGTGAAACACTTCTTTTGCTCGTGAAGCATGCGGATCTTATTATTCACAAGGCCACACAAGAGCATTTGATATCACATGTCCTTCCTATGCTGGTACGGGCTTATGATGACACTGATCCCCGACTACAGGAAGAAGTACTGCGACGGACAGTGCCATTGTCTCGTCAGCTTGACATGAAGCTACTGAAACAGTCTGTTCTGCCACGCGTACATGGATTAGCCTTAAAGACTACAGTTGCTGCGGTGCGTGTAAATGCCTTGCGCTGTTTAGGGGATCTTGTTCCATCTTTGGATAAAGAAGGCATACTGGAGATCTTGCAAACTCTTCGGCGTTGTACAGCTGTTGACCACACCGCACCAACACTTATGTGCACCC ] [+] EMBL AK058983 [ ATGAAGCAACCATCAGACCCTTTTGATTTCAGCACTCAAACAAAGCAACCCTCGGCACTTCCTTTTGATTTCAGTACTCAACAACCTAAGCCATCATCTGCAATCCCGCAAGTGACACCAGCTACAATTTCGCCTGCACCATCACTTCCATCACTGCAATCTCTTGCACCAAGCTCTGGACCCCAAACTTCTGGTTCATGTGTTCCTGTTGACATTGAGTGGCCTCCTAGAAAAAACACATCGTCTGACTTTAATGCACCATTATCTGTTAGTGAGCAAAGTAAATCTGGAGGGCTATCTAGTGATGGTCTTGCTGATATTGATCCTTTTGCCGACTGGCCCCCAAAAGCAAGCAGTGGTGCCAGCATTTTAGCTGTTGGACACCTGTCAAGCACAAGCCAAAGTATTTCTGGACTAAGTACAGGAAATATTGGGTTCAGTGGCAACAGTGGTTCTCTGGAACAAATGAAAACCAACCAAATGAGCTGGTCAGCGAAACCGAACACTACTAATTTAATGGCCGTGAACTCAACAGGCAATTACTTGAATCAGGGCAACTCAGCTCTTGGATTTGGAAATCCAATTGGAGGACGGAGTACAGGGTCATTGTCAAGCAGCACAACACAGGGTCCACCCAGGCTTGCTCCTCCTCCATCTGCTTCTGTTGGAAGAGGGCGTGGTAGAAATCAAGGGCAATCGGCACTTTCACGAGCATCACGTACTCCTCATTCCAATGTTTCATCAGAGCAGCCACCTA TTCTAGATT TA CTGTAGCAATTGAGGGCCCTCTATCTTCGTTTTGCAAATGTTGAAGTTCCTATATGGTGAGCATCATGCCTTTTTTCTTCCCAACCTGCTTGCGGCAGTAGTGTATTTACATGTCAGTTTTGCAAACTGGATGGTCTGAG ACTGAGGCCCCC AAATGA AGCTGCTTCAGAGCCTTCCAGAGGTTACAGAATGTTCCCTTTCTCAGGAGTCAGGATGTCTTCTTCCACACTTGGTCCTAGTTGGACAGGCGAAACAGGAGAAATTCTATTTGTGTATAATATATTTGTTCAGACGGCTGTAGATTGTAGAGTTCATGAATACAGTCAACATGTTTGTTG ] [-] EMBL CB627831 [ CAAGCAGTGGTGCCAGCATTTCAGCTGTTGGACACCTGTCAAGCACAAGCCAAAGTATTTCT GACTAAGTACAGGAAATATTGGGTTCAGTGGCAACAGTGGTTCTCTGGGACAAATGAAAACCAACCAAATGAGCTGGTCAGCGAAACCGAACACTACTAATTTAATGGCCGTGAACTCAACAGGCAATTACTTGAATCAGGGCAACTCAGCTCTTGGATTTGGAAATCCAATTGGAGGACGGAGTACAGGGTCATTGTCAAGCAGCACAACACAGGGTCCACCCAGGCTTGCTCCTCCTCCATCTGCTTCTGTTGGAAGAGGGCGTGGTAGAAATCAAGGGCAATCGGCACTTTCACGAGCATCACGTACTCCTCATTCCAATGTTTCATCAGAGCAGCCACCTA TTCTAGATT TA CTGTAGCAATTGAGGGCCCTCTATCTTCGTTTTGCAAATGTTGAAGTTCCTATATGGTGAGCATCATGCC TTTTTCTTCCCAACCTGCTTGCGGCAGTAGTGTATTTACATGTCAGTTTTGCAAACTGGATGGTCTGAG ACTGAGGCCCCC AAATGA AGCTGCTTCAGAGCCTTCCAGAGGTTACAGAATGTTCCCTTTCTCAGGAGTCAGGATGTCTTCTTCCACACTTGGTCCTAGTTGGACAGGCGAAACAGGAGAAATTCTATTTGTGTATAATATATTTGTTCAGACGGCTGTAGATTGTAGAGTTCATGAATACAGTCAACATGTTTGTTGGGATGTTTTGAATGCCCAGAATGTGCCACCACTCCACCAGGTTTAATGGGCCTCGTGCAAATGGACCCAAGG TGATTTACT ] [+] EMBL CF313941 [ TTCAGTGGCAACAGTGGTTCTCTGGGACAAATGAAAACCAACCAAATGAGCTGGTCAGCGAAACCGAACACTACTAATTTAATGGCCGTGAACTCAACAGGCAATTACTTGAATCAGGGCAACTCAGCTCTTGGATTTGGAAATCCAATTGGAGGACGGAGTACAGGGTCATTGTCAAGCAGCACAACACAGGGTCCACCCAGGCTTGCTCCTCCTCCATCTGCTTCTGTTGGAAGAGGGCGTGGTAGAAATCAAGGGCAATCGGCACTTTCACGAGCATCACGTACTCCTCATTCCAATGTTTCATCAGAGCAGCCACCTA TTCTAGATT TA CTGTAGCAATTGAGGGCCCTCTATCTTCGTTTTGCAAATGTTGAAGTTCCTATATGGTGAGCATCATGCCTTTTTTCTTCCCAACCTGCTTGCGGCAGTAGTGTATTTACATGTCAGTTTTGCAAACTGGATGGTCTGAG ACTGAGGCCCCC AAATGA AGCTGCTTCAGAGCCTTCCAGAGGTTACAGAATGTTCCCTTTCTCAGGAGTCAGGATGTCTTCTTCCACACTTGGTCCTAGTTGGA ] [-] EMBL CB678801 [ TTACTTGAATCAGGGCAACTCAGCTCTGGGATTTGGAAATCCAATTGGAGGACGGAGTACAGGGTCATTGTCAAGCAGCACAACACAGGGTCCACCCAGGCTTGCTCCTCCTCCATCTGCTTCTGTTGGAAGAGGGCGTGGTAGAAATCAAGGGCAATCGGCACTTTCACGAGCATCACGTACTCCTCATTCCAATGTTTCATCAGAGCAGCCACCTA TTCTAGATT TA CTGTAGCAATTGAGGGCCCTCTATCTTCGTTTTGCAAATGTTGAAGTTCCTATATGGTGAGCATCATGCCTTTTTTCTTCCCAACCTGCTTGCGGCAGTAGTGTATTTACATGTCAGTTTTGCAAACTGGATGGTCTGAG ACTGAGGCCCCC AAATGA AGCTGCTTCAGAGCCTTCCAGAGGTTACAGAATGTTCCCTTTCTCAGGAGTCAGGATGTCTTCTTCCACACTTGGTCCTAGTTGGACAGGCGAAACAGGAGAAATTCTATTTGTGTATAATATATTTGTTCAGACGGCTGTAGATTGTAGAGTTCATGAATACAGTCAACATGTTTGTTGGGATGTTTTGAATGCCCAGAATGTGCCACCACTCCACCAGGTTTAATGGGCCTCGTGCAAATGGACCCAAGG CGATTTACTCAGATACTCCCCTCCCCTACATGTAATTCATTTATTCTGTGAAGGCCCCATGTTGTGTAGTCCAGAAGTATAGGCCCATCAACACAACAGTAACCGTTGTCGATAGAAACCCGTGTCTTCTGTGAATTGTGATTAA AGTTGTTGAGGGTGAACGTG ] [-] EMBL CB678799 [ CTCAGCTCTTGGATTTGGAAATCCAATTGGAGGACGGAGTACAGGGTCATTGTCAAGCAGCACAACACAGGGTCCACCCAGGCTTGCTCCTCCTCCATCTGCTTCTGTTGGAAGAGGGCGTGGTAGAAATCAAGGGCAATCGGCACTTTCACGAGCATCACGTACTCCTCATTCCAATGTTTCATCAGAGCAGCCACCTA TTCTAGATT TA CTGTAGCAATTGAGGGCCCTCTATCTTCGTTTTGCAAATGTTGAAGTTCCTATATGGTGAGCATCATGCCTTTTTTCTTCCCAACCTGCTTGCGGCAGTAGTGTATTTACATGTCAGTTTTGCAAACTGGATGGTCTGAG ACTGAGGCCCCC AAATGA AGCTGCTTCAGAGCCTTCCAGAGGTTACAGAATGTTCCCTTTCTCAGGAGTCAGGATGTCTTCTTCCACACTTGGTCCTAGTTGGACAGGCGAAACAGGAGAAATTCTATTTGTGTATAATATATTTGTTCAGACGGCTGTAGATTGTAGAGTTCATGAATACAGTCAACATGTTTGTTGGGATGTTTTGAATGCCCAGAATGTGCCACCACTCCACCAGGTTTAATGGGCCTCGTGCAAATGGACCCAAGG CGATTTACTCAGATACTCCCCTCCCCTACATGTAATTCATTTATTCTGTGAAGGCCCCATGTTGTGTAGTCCAGAAGTATAGGCCCATCAACACAACAGTAACCGTTGTCGATAGAAACCCGTGTCTTCTGTGAATTGTGATTAA AGTTGTTGAGGGTGAACGTG ] [-] EMBL CB675371 [ AATCGGCACTTTCACGAGCATCATGTACTCCTCATTCCAATGTTTCATCAGAGCAGCCACCTA TTTTAGATT TA CTGTAGCAATTGAGGGCCCTCTATCTTCGTTTTGCAAATGTGGAAGTTCCTATATGGTGAGCATCATGCCTTTTTTTTTCCCAACCTGCTTGGGGCAGTAGTGTATTTACATGTCAGTTTTGCAAACTGGATGGTTTGAG ACTGAGGCCCCC AAATGA AGCTGCTTCAGAGCCTTCCAGAGGTTACAGAATGTTCCCTTTTTCAGGAGTCAGGATGTTTTCTTCCACACTTGGTCTTAGTTGGACAGGCGAAACAGGAGAAATTTTATTGGTGTATAATATATTTGTTCAGACGGCTGTAGATTGTAGAGTTCAGGAATACAGTCAACATGTTGGTGGGGATGTTTTGAATGCCCAGAATGTGCCACCACTCCACCAGTTTTAATGGGCCTGGTGCAAATGGACCCAAGG GGATTTATTCAGATACTCCCCTCCCCTACAGGTAATTCATTTATTCGGGGAAGGCCCCATGTTGTGTAGTCCAGAAGTATAGGCCCATAAACACAACAGTAACCGTTGTCGATAGAAACCCGTGTCTTCGGTGAATTGTGATTAA AGTTGTGGGGGG ] [+] EMBL BI805978 [ CCACCTAGTNCTAGATTGTATCTGTAGCAATTGAGGGCCCTCTATCTTCGTTTTGCAAATGTTGAAGTTCCTATATGGTGAGCATCATGGCCNTTTTCNTCCCAACCNGCTTGCGGCAGTAGTGTATTTACATGTCAGTTTTGCAAACTGGATGGTCTGAGTTCTGAGGCCCCCTAAATGANAGCTGCTTCAGAGCCTTCCAGAGGTTACAGAATGTTCCCTTTCTCAGGAGTCAGGATGTCTTCTTCCACACTTGGTCCTAGTTGGACAGGCGAAACAGGAGAAATTCTATTTGTGTATAATATATTTGTTCAGACGGCTGTAGATTGTAGAGTTCATGAATACAGTCAACATGTTTGTTGGGATGTTTTGAATGCCCAGAATGTGCCACCACNCCACCAGGTTTAATGGGCCTCGTGCAAATGGACCCAAGG TGATTTACTCAaaa ] [-] EMBL CF313940 [ TAGCAATTGAGGGCCCTCTATCTTCGTTTTGCAAATGTTGAAGTTCCTATATGGTGAGCATCATGCCTTTTTTCTTCCCAACCTGCTTGCGGCAGTAGTGTATTTACATGTCAGTTTTGCAAACTGGATGGTCTGAG ACTGAGGCCCCC AAATGA AGCTGCTTCAGAGCCTTCCAGAGGTTACAGAATGTTCCCTTTCTCAGGAGTCAGGATGTCTTCTTCCACACTTGGTCCTAGTTGGACAGGCGAAACAGGAGAAATTCTATTTGTGTATAATATATTTGTTCAGACGGCTGTAGATTGTAGAGTTCATGAATACAGTCAACATGTTTGTTGGGATGTTTTGAATGCCCAGAATGTGCCACCACTCCACCAGGTTTAATGGGCCTCGTGCAAATGGACCCAAGG CGATTTACTCAGATACTCCCCTCCCCTACATGTAATTCATTTATTCTGTGAAGGCCCCATGTTGTGTAGTCCAGAAGTATAGGCCCATCAACACAACAGTAACCGTTGTCGATAaa ] [-] EMBL AU225197 [ AGGATGTCTTCTTCCACACTTGGTCGTAGTTGGACAGGCGAGACAGGAGAAATTCTATTTGTGTATAATATATTTGTTCAGACGGCTGTAGATTGTAGAGTTCATGAATACAGTCAACATGTTTGTTGGGATGTTTTGAATGCCCAGAATGTGCCACCACTCCACCAGGTTTAATGGGCCTCGTGCAAATGGACCCAAGGTCGATTTACTCAGATACTCCCCTCCCCTACATGTAATTCATTTATTCTGTGAAGGCCCCATGTTGTGTAGTCCAGAAGTATAGGCCCATCAACACAACAGTAACCGTTGTCGATAGAAACCCGTGTCTTCTGTGAATTGTGATTAATAGTTGTTGAGGGTGAACGTGCATTTCTTTTTTTTGGGTCAGGTCACCACCTTGACCATTAAGCGGC] consensusID : consensus_13667#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 784 fasta sequence [GGCATTATCGGATATGTGGAAGGACTTCGATTCCCGAGTTCTTCGGTATAAAGTTCTTCCACCTCTCTGTGCTGAGTTACGCAACATGGTCATGCAGCCAATGATTTTGCCCATGGTTCTAACAATAGCGGAATCTCAGGACAAAGGTGATTTTGAGCTTTCAACACTGCCGGCCCTTGTTCCGGTATTTACTTCAGCGTCAGGTGAAACACTTCTTTTGCTCGTGAAGCATGCGGATCTTATTATTCACAAGGCCACACAAGAGCATTTGATATCACATGTCCTTCCTATGCTGGTACGGGCTTATGATGACACTGATCCCCGACTACAGGAAGAAGTACTGCGACGGACAGTGCCATTGTCTCGTCAGCTTGACGTGAAGCTACTGAAACAGTCTGTTCTGCCACGCGTACATGGATTAGCCTTAAAGACTACAGTTGCTGCGGTATGCATAATACATGTTTTAGTTTTATAATTTGGGTACTTTATGTGTCAGATTGTACCATATTAATACACATTAAAACACACAAATAGCATGTATGATAAAACAACTTTTTTTTTAAAAAAGAATAATTAAAAGGGAAAACTCCTGTCTCGTTTGCACATAAAATAAATAAACAGAAATATAAGAGCCATGAGATGTTGAGTGTATGGTTTTTCTATGTAGCTACTCCATCCTATAGCTTGTTATTGATCAAGAGTGTTAAGATCTTAGATGTTAGTGTCACTATAGTGCTATTATATAATTCTTCTGTATTTTATCACCCCCTATTATAATCCCGCC] [+] EMBL CB678800 [GGCATTATCGGATATGTGGAAGGACTTCGATTCCCGAGTTCTTCGGTATAAAGTTCTTCCACCTCTCTGTGCTGAGTTACGCAACATGGTCATGCAGCCAATGATTTTGCCCATGGTTCTAACAATAGCGGAATCTCAGGACAAAGGTGATTTTGAGCTTTCAACACTGCCGGCCCTTGTTCCGGTATTTACTTCAGCGTCAGGTGAAACACTTCTTTTGCTCGTGAAGCATGCGGATCTTATTATTCACAAGGCCACACAAGAGCATTTGATATCACATGTCCTTCCTATGCTGGTACGGGCTTATGATGACACTGATCCCCGACTACAGGAAGAAGTACTGCGACGGACAGTGCCATTGTCTCGTCAGCTTGACGTGAAGCTACTGAAACAGTCTGTTCTGCCACGCGTACATGGATTAGCCTTAAAGACTACAGTTGCTGCGGTATGCATAATACATGTTTTAGTTTTATAATTTGGGTACTTTATGTGTCAGATTGTACCATATTAATACACATTAAAACACACAAATAGCATGTATGATAAAACAACTTTTTTTTTAAAAAAGAATAATTAAAAGGGAAAACTCCTGTCTCGTTTGCACATAAAATAAATAAACAGAAATATAAGAGCCATGAGATGTTGAGTGTATGGTTTTTCTATGTAGCTACTCCATCCTATAGCTTGTTATTGATCAAGAGTGTTAAGATCTTAGATGTTAGTGTCACTATAGTGCTATTATATAATTCTTCTGTATTTTATCACCCCCTATTATAATCCCGCC] consensusID : consensus_13667#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 480 fasta sequence [GTTCTGAGACTGAGCCCCCCAAATGAACCTGCTTCAGACCCTTCCCAGAGGTTACAGAATGTNCCCTTTCTCCAGGAGTCAGGATGTCTTCTGTCCACACCTTGGTCCTAGTTGGACAGGCGAAACCNGGAGAAATTCTATTTGTGTATAATATATTTGTTCCAGACGGCTGTAGATTGTAGAGTTCCACTGAATACACGTCCAACATGTTTTTGGGATGTTTTGAATGCCCCAGAATGTCCCACCACCTCCACCAGGTTTAATGGGCCTCGTGCAAATGGGACCCCAGGTGATTTACTCAGATACTCCCCTCCCCTACATGTAATTCATTTATTCTGTGAAGGCCCCACTGTTGTGTAGTCCACGAAGTATAGCCCCAATCAACACACACACGTAACCGTTGTCCGATAGAAACCCATGTCTTCTGTGAATTGTGATTAAAGTTCTTCGAGGGTGAACCGTCCATTTCTTTTAAAAAAA] [+] EMBL BM421732 [GTTCTGAGACTGAGCCCCCCAAATGAACCTGCTTCAGACCCTTCCCAGAGGTTACAGAATGTNCCCTTTCTCCAGGAGTCAGGATGTCTTCTGTCCACACCTTGGTCCTAGTTGGACAGGCGAAACCNGGAGAAATTCTATTTGTGTATAATATATTTGTTCCAGACGGCTGTAGATTGTAGAGTTCCACTGAATACACGTCCAACATGTTTTTGGGATGTTTTGAATGCCCCAGAATGTCCCACCACCTCCACCAGGTTTAATGGGCCTCGTGCAAATGGGACCCCAGGTGATTTACTCAGATACTCCCCTCCCCTACATGTAATTCATTTATTCTGTGAAGGCCCCACTGTTGTGTAGTCCACGAAGTATAGCCCCAATCAACACACACACGTAACCGTTGTCCGATAGAAACCCATGTCTTCTGTGAATTGTGATTAAAGTTCTTCGAGGGTGAACCGTCCATTTCTTTTAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_13667#0 GGATTTGGTTTTGCTCTTTCTGTTGACCAAGCCACAGGCAGTTTGACATCAACACAGCAA 60 consensus_13667#2 ------------------------------------------------------------ consensus_13667#1 ------------------------------------------------------------ consensus_13667#0 TTCCACTATTCGGACTATGATGTTGAGGATACAGCTTTACCTCTTCAACCATCTCTGAAT 120 consensus_13667#2 ------------------------------------------------------------ consensus_13667#1 ------------------------------------------------------------ consensus_13667#0 TATACTGCACCAGAATTGGTCCGAAGTGGAGATTCTAAAGTTGGCTCGGCTTGTGACATA 180 consensus_13667#2 ------------------------------------------------------------ consensus_13667#1 ------------------------------------------------------------ consensus_13667#0 TTTAGTTTTGGATGTCTAGCTTATCACCTGGTTGCTCGTAGACCACTTCTGGATTGCCAT 240 consensus_13667#2 ------------------------------------------------------------ consensus_13667#1 ------------------------------------------------------------ consensus_13667#0 AACAATGTGAAAATGTATATGAATTCCTTGACGTATTTAACAAGTGAAGCCTTTTCTAAT 300 consensus_13667#2 ------------------------------------------------------------ consensus_13667#1 ------------------------------------------------------------ consensus_13667#0 ATTCCTGCTGATTTAGTGGTGGATTTGCAAAGGATGCTATCAGTTGATGTAGCATCACGC 360 consensus_13667#2 ------------------------------------------------------------ consensus_13667#1 ------------------------------------------------------------ consensus_13667#0 CCTAGTGCTATGGCGTTCACAGGCTCTTCCTTCTTCCGGAATGATACGCGGTTGCGTGCT 420 consensus_13667#2 ------------------------------------------------------------ consensus_13667#1 ------------------------------------------------------------ consensus_13667#0 CTTCGTTTCCTTGACCATTTGCTTGAGAGAGACAATATGCAGAAGACGGAGTTTCTGAAG 480 consensus_13667#2 ------------------------------------------------------------ consensus_13667#1 ------------------------------------------------------------ consensus_13667#0 GCATTATCGGATATGTGGAAGGACTTCGATTCCCGAGTTCTTCGGTATAAAGTTCTTCCA 540 consensus_13667#2 ------------------------------------------------------------ consensus_13667#1 ------------------------------------------------------------ consensus_13667#0 CCTCTCTGTGCTGAGTTACGCAACATGGTCATGCAGCCAATGATTTTGCCCATGGTTCTA 600 consensus_13667#2 ------------------------------------------------------------ consensus_13667#1 ------------------------------------------------------------ consensus_13667#0 ACAATAGCGGAATCTCAGGACAAAGGTGATTTTGAGCTTTCAACACTGCCGGCCCTTGTT 660 consensus_13667#2 ------------------------------------------------------------ consensus_13667#1 ------------------------------------------------------------ consensus_13667#0 CCGGTATTTACTTCAGCGTCAGGTGAAACACTTCTTTTGCTCGTGAAGCATGCGGATCTT 720 consensus_13667#2 ------------------------------------------------------------ consensus_13667#1 ------------------------------------------------------------ consensus_13667#0 ATTATTCACAAGGCCACACAAGAGCATTTGATATCACATGTCCTTCCTATGCTGGTACGG 780 consensus_13667#2 ------------------------------------------------------------ consensus_13667#1 ------------------------------------------------------------ consensus_13667#0 GCTTATGATGACACTGATCCCCGACTACAGGAAGAAGTACTGCGACGGACAGTGCCATTG 840 consensus_13667#2 ------------------------------------------------------------ consensus_13667#1 ------------------------------------------------------------ consensus_13667#0 TCTCGTCAGCTTGACGTGAAGCTACTGAAACAGTCTGTTCTGCCACGCGTACATGGATTA 900 consensus_13667#2 ------------------------------------------------------------ consensus_13667#1 ------------------------------------------------------------ consensus_13667#0 GCCTTAAAGACTACAGTTGCTGCGGTGCGTGTAAATGCCTTGCGCTGTTTAGGGGATCTT 960 consensus_13667#2 ------------------------------------------------------------ consensus_13667#1 ------------------------------------------------------------ consensus_13667#0 GTTCCATCTTTGGATAAAGAAGGCATACTGGAGATCTTGCAAACTCTTCGGCGTTGTACA 1020 consensus_13667#2 ------------------------------------------------------------ consensus_13667#1 ------------------------------------------------------------ consensus_13667#0 GCTGTTGACCACACCGCACCAACACTTATGTGCACCCTTGGAGTGGCTAATGCAATTTTT 1080 consensus_13667#2 ------------------------------------------------------------ consensus_13667#1 ------------------------------------------------------------ consensus_13667#0 AAACAGTGTGGTGTTGAGTTTGCTGCGGAGTACGTGATTCCTCTCGTCTTCCCACTGCTC 1140 consensus_13667#2 ------------------------------------------------------------ consensus_13667#1 ------------------------------------------------------------ consensus_13667#0 ACAGCACATCAACTGAATGTACAGCAATTTGCTAAGTACATACTATTTGTCAAGGATATC 1200 consensus_13667#2 ------------------------------------------------------------ consensus_13667#1 ------------------------------------------------------------ consensus_13667#0 ACAAGCAAGATTGAGGAGAAGCGTGGTGTGACTGTTACAGATAATGGGAATACAGAGGTA 1260 consensus_13667#2 ------------------------------------------------------------ consensus_13667#1 ------------------------------------------------------------ consensus_13667#0 AAAGTATCACCCTCATTGGCTAATGGGATTCATTCTGAGCCATTGTCACGAGGTGTGGGA 1320 consensus_13667#2 ------------------------------------------------------------ consensus_13667#1 ------------------------------------------------------------ consensus_13667#0 CAAACTGAACAGATACAAACTGCAAAGGGTGCTGCATGGGATGAGGACTGGGGCCCTACT 1380 consensus_13667#2 ------------------------------------------------------------ consensus_13667#1 ------------------------------------------------------------ consensus_13667#0 AAGAAAGCAAGCACTCCATCACAGTCATCTGATTCCAATGCACGGATGAAGCAACCATCA 1440 consensus_13667#2 ------------------------------------------------------------ consensus_13667#1 ------------------------------------------------------------ consensus_13667#0 GACCCTTTTGATTTCAGCACTCAAACAAAGCAACCCTCGGCACTTCCTTTTGATTTCAGT 1500 consensus_13667#2 ------------------------------------------------------------ consensus_13667#1 ------------------------------------------------------------ consensus_13667#0 ACTCAACAACCTAAGCCATCATCTGCAATCCCGCAAGTGACACCAGCTACAATTTCGCCT 1560 consensus_13667#2 ------------------------------------------------------------ consensus_13667#1 ------------------------------------------------------------ consensus_13667#0 GCACCATCACTTCCATCACTGCAATCTCTTGCACCAAGCTCTGGACCCCAAACTTCTGGT 1620 consensus_13667#2 ------------------------------------------------------------ consensus_13667#1 ------------------------------------------------------------ consensus_13667#0 TCATGTGTTCCTGTTGACATTGAGTGGCCTCCTAGAAAAAACACATCGTCTGACTTTAAT 1680 consensus_13667#2 ------------------------------------------------------------ consensus_13667#1 ------------------------------------------------------------ consensus_13667#0 GCACCATTATCTGTTAGTGAGCAAAGTAAATCTGGAGGGCTATCTAGTGATGGTCTTGCT 1740 consensus_13667#2 ------------------------------------------------------------ consensus_13667#1 ------------------------------------------------------------ consensus_13667#0 GATATTGATCCTTTTGCCGACTGGCCCCCAAAAGCAAGCAGTGGTGCCAGCATTTTAGCT 1800 consensus_13667#2 ------------------------------------------------------------ consensus_13667#1 ------------------------------------------------------------ consensus_13667#0 GTTGGACACCTGTCAAGCACAAGCCAAAGTATTTCTGGACTAAGTACAGGAAATATTGGG 1860 consensus_13667#2 ------------------------------------------------------------ consensus_13667#1 ------------------------------------------------------------ consensus_13667#0 TTCAGTGGCAACAGTGGTTCTCTGGGACAAATGAAAACCAACCAAATGAGCTGGTCAGCG 1920 consensus_13667#2 ------------------------------------------------------------ consensus_13667#1 ------------------------------------------------------------ consensus_13667#0 AAACCGAACACTACTAATTTAATGGCCGTGAACTCAACAGGCAATTACTTGAATCAGGGC 1980 consensus_13667#2 ------------------------------------------------------------ consensus_13667#1 ------------------------------------------------------------ consensus_13667#0 AACTCAGCTCTTGGATTTGGAAATCCAATTGGAGGACGGAGTACAGGGTCATTGTCAAGC 2040 consensus_13667#2 ------------------------------------------------------------ consensus_13667#1 ------------------------------------------------------------ consensus_13667#0 AGCACAACACAGGGTCCACCCAGGCTTGCTCCTCCTCCATCTGCTTCTGTTGGAAGAGGG 2100 consensus_13667#2 ------------------------------------------------------------ consensus_13667#1 ------------------------------------------------------------ consensus_13667#0 CGTGGTAGAAATCAAGGGCAATCGGCACTTTCACGAGCATCACGTACTCCTCATTCCAAT 2160 consensus_13667#2 ------------------------------------------------------------ consensus_13667#1 ------------------------------------------------------------ consensus_13667#0 GTTTCATCAGAGCAGCCACCTATTCTAGATTTACTGTAGCAATTGAGGGCCCTCTATCTT 2220 consensus_13667#2 ------------------------------------------------------------ consensus_13667#1 ------------------------------------------------------------ consensus_13667#0 CGTTTTGCAAATGTTGAAGTTCCTATATGGTGAGCATCATGCCTTTTTTCTTCCCAACCT 2280 consensus_13667#2 ------------------------------------------------------------ consensus_13667#1 ------------------------------------------GGCATTATCGGATATGTG 18 consensus_13667#0 GCTTGCGGCAGTAGTGTATTTACATGTCAGTTTTGCAAACTGGATGGTCTGAGACTGAGG 2340 consensus_13667#2 ---------------------------------------------GTTCTGAGACTGAGC 15 consensus_13667#1 GAAGGACTTCGATTCCCGAGTTCTTCGGTATAAAGTTCTTCCACCTCTCTGTG-CTGAGT 77 **** * ***** consensus_13667#0 CCCCCAA-ATGAAGCTGCTTCAGAG--CCTTCC-AGAGGTTACAGAATGTTCCCTTTCTC 2396 consensus_13667#2 CCCCCAA-ATGAACCTGCTTCAGAC--CCTTCCCAGAGGTTACAGAATGTNCCCTTTCTC 72 consensus_13667#1 TACGCAACATGGTCATGCAGCCAATGATTTTGCCCATGGTTCTAACAATAGCGGAATCTC 137 * *** *** *** * * ** * **** * * * **** consensus_13667#0 -AGGAGTCAGGATGTCTT---CT-TCCACAC---------TTGGTCC--TAGTTGGACAG 2440 consensus_13667#2 CAGGAGTCAGGATGTCTT---CTGTCCACACC--------TTGGTCC--TAGTTGGACAG 119 consensus_13667#1 -AGGACAAAGGTGATTTTGAGCTTTCAACACTGCCGGCCCTTGTTCCGGTATTTACTTCA 196 **** *** * ** ** ** **** *** *** ** ** consensus_13667#0 GCGAAAC-AGGAGAAATTCTATTTGT-GTATAATATATTTGTTC-AGACGGCTGTAGATT 2497 consensus_13667#2 GCGAAACCNGGAGAAATTCTATTTGT-GTATAATATATTTGTTCCAGACGGCTGTAGATT 178 consensus_13667#1 GCGTCAGGTGAAACACTTCTTTTGCTCGTGAAGCATGCGGATCTTATTATTCACAAGGCC 256 *** * * * * **** ** * ** * ** * * * ** consensus_13667#0 GTAGAGTTCA--TGAATA-CAG--TCAACATGTTTGTTGGGATG--TTTTGAATGCCC-A 2549 consensus_13667#2 GTAGAGTTCCACTGAATA-CACGTCCAACATGTTT-TTGGGATG--TTTTGAATGCCCCA 234 consensus_13667#1 ACACAAGAGCATTTGATATCACATGTCCTTCCTATGCTGGTACGGGCTTATGATGACACT 316 * * * *** ** * * *** * * ** *** * consensus_13667#0 GAATGTGCCACCAC-TCCACCAGGTTTAATGGGCCTCGTGCAAATGG-ACCCAAGGC--- 2604 consensus_13667#2 GAATGTCCCACCACCTCCACCAGGTTTAATGGGCCTCGTGCAAATGGGACCCCAGGT--- 291 consensus_13667#1 GA-TCCCCGACTACAGGAAGAAGTACTGCGACGGACAGTGCCATTGTCTCGTCAGCTTGA 375 ** * * ** ** * ** * * **** * ** * ** consensus_13667#0 ----GATTTACTCAGATACTCCCCTCCCCTACATGTAATTCATTTATTCTGTGAAGGCCC 2660 consensus_13667#2 ----GATTTACTCAGATACTCCCCTCCCCTACATGTAATTCATTTATTCTGTGAAGGCCC 347 consensus_13667#1 CGTGAAGCTACTGAAACAGTCTGTTCTGCCACGCGTACATGGATTAGCCT-TAAAGACTA 434 * **** * * * ** ** * ** *** * *** ** * *** * consensus_13667#0 CA--TGTTGTGTAGTCCA-GAAGTATAGGCCCA-TCAACACA-ACA-GTAACCGTTGTC- 2713 consensus_13667#2 CAC-TGTTGTGTAGTCCACGAAGTATAGCCCCAATCAACACACACACGTAACCGTTGTCC 406 consensus_13667#1 CAGTTGCTGCGGTATGCATAATACATGTTTTAGTTTTATA-ATTTGGGTACTTTATGTGT 493 ** ** ** * * ** * ** * * * * *** *** consensus_13667#0 GATAGAAACCCGTGTCTTCTGTGAATTGTGAT---TAAAGTTGTT-GAGGGTGAAC-GTG 2768 consensus_13667#2 GATAGAAACCCATGTCTTCTGTGAATTGTGAT---TAAAGTTCTTCGAGGGTGAACCGTC 463 consensus_13667#1 CAGATTGTACCATAT-TAATACACATTAAAACACACAAATAGCATGTATGATAAAACAAC 552 * * ** * * * * *** * *** * * * * ** consensus_13667#0 CATTTCTTTTTTTTGGGTCAGGTCACCACCTTGACCATTAAGCGGC-------------- 2814 consensus_13667#2 CATTTCTTTTAAAAAAA------------------------------------------- 480 consensus_13667#1 TTTTTTTTTAAAAAAGAATAATTAAAAGGGAAAACTCCTGTCTCGTTTGCACATAAAATA 612 *** *** consensus_13667#0 ------------------------------------------------------------ consensus_13667#2 ------------------------------------------------------------ consensus_13667#1 AATAAACAGAAATATAAGAGCCATGAGATGTTGAGTGTATGGTTTTTCTATGTAGCTACT 672 consensus_13667#0 ------------------------------------------------------------ consensus_13667#2 ------------------------------------------------------------ consensus_13667#1 CCATCCTATAGCTTGTTATTGATCAAGAGTGTTAAGATCTTAGATGTTAGTGTCACTATA 732 consensus_13667#0 ---------------------------------------------------- consensus_13667#2 ---------------------------------------------------- consensus_13667#1 GTGCTATTATATAATTCTTCTGTATTTTATCACCCCCTATTATAATCCCGCC 784 |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||