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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13687#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 3232 fasta sequence
[GAGCCACGTGGATTGGGCTGAGGTGGTGGTGGTGGGCATTTGATCTCCGCGGGGGCGGCGGCGATTGGGTGCTGGGAGGCGGTTGCGCGTGTGGTGTATGGAGGTTTCCTGGGAGGTGGACGCGGCGGGGCCGCCGTGGAGGCCGAGTGAGTCCACGGCGTTCCTTCCGTTCGCTTCTGCTGCGGCGGCCGGGGACCGGGCGGGGGCGTCGTTGTCCGGTCGACGCAATGGGCTTGCCGCCCGCTCAAGCAACCTCAGCTCCGTCAGGAAGAGGCCTTTTGTTGCAAGATTAACCACAGACATTGTCCAAACTTTCGGAAAATGCAATCCTGAGTTTAAGTACTCAGATTCACTGAACCCCAAGCGCTTTCTCACCAACCCTTCAGTTCCAGCTCACAATGATGGCCTTGATAATGCAAATTCTGACCTCATCTTGTATGTCAACTTGGAATTGGTTAATAAAAAGTCGGACCGGAGGTACGTTATTAAAGAAATGCTTGGCCAAGGTACGTTTGGACAGGTTGCTAAATGCTGGGATGGAGAAACTAACAGCTATGTTGCAGTAAAGGTTATAAAAAATCAGCCTGCCTTTTATCAGCAAGCTATCATGGAGGTCTCACTGTTGAGCATGCTGAATGAGAAATATGATCCTGATGATCAACACCACATTGTCCGGATGCTGGATTTTTTTCTCTACCAAAATCATTTGTGTATAGCATTTGAAATGCTTGGCCATAACCTTTATGAGCTGCTAAAAAGGAATAGTCTAAGAGGTTTGCAACTGAAATATGTCCGAACTTTCTCTAGACAGATATTGGATGCATTGGTTGTCATGAAGGACGCTGGCATTATTCATTGTGATCTAAAACCGGAAAATATTCTCATAACTCCAAATGTAAAAACAGCAGCTGGGGTTAAAGTAATTGATTTTGGATCAGCATGCTTGGAGGGTAAAACCATTTACTCGTATATTCAGAGTCGGTATTACAGATCTCCGGAAGTACTTCTTGGTTACCCATATACCACGGCCATTGATATGTGGTCATTTGGCTGTATAGTCGCTGAACTATATATAGGATTGCTTTTATTTCCTGGAGCGTCAGAATACGATGTCCTATGCCGTATGATTGAGATTCTCGGTGGACAACCACCAGATGATCTGCTACGGGAGGCTAAAAATACTGGGAGATTTTTTAAGCAAGTTGGAAGTATTTATCCTGGTATTGAAATGCAGAATGGCCCTATCAGTGCGTACAGAATATTAACTGAAGAGGAGATTGAAACTAGGGAGTCCAAAAAACCAAAAGTAGGAAGATGGTATTTCCCTCGTGGAAGGCTTGACAAACTCATATATACATACCCTTGGAAGAATTTGAATGGGGAAAACTTGCCAGAGACAGAAAAGACAGATCGCTTAGCACTGGTTGATTTCTTGAGAGGGCTTGTTGAGTTTGATCCTAATAAGCGGTGGTCACCATTGCAGGCTTCATATCATCCCTTCATAACTGGTGAAGCGTTTACTGGTCCATATGAGCCTATCCAGGAGACTCCAAGAATTCCTGTTGGTCGTGTTGCAGCAGTTGATCATAATCCTGGAGGAGGTCACTGGTTAGCTGCTGGTCTTTCCCATCAG---GTTGGAAGCATTAACAGAGGCCTACCATTTAATAACGCTTTTGCACCAAAGATTCCCTTTTCATATGGAAGCAGCTGTGGCAGCTTCGGTAGCCATGGTAGCTTTAATGACAATGTAGGTCTTGCAAGCAGCTATGGAAGCTATGATGTCAACAGTGTGAACATGTATCATTCACCACTAGGCCCTTCTGGATTCAATTTACATTCACAAGCCGGAGGAACATTTTTGGGATCTAGTCCAGATATTAGACGACGATCTTATCTCTATCATGGTGGTGGCATTCGATTAAGCCCTGGGTGTCCAGGGCCTATGTCTCTTGGGGCAAGTCCATCACAATTTACTCCACCAAATTCTCAGATGCAAATCCCAAGTACTGCTACAGGAAAGTATGGTTCCACTTCTCCTGCAAGGAGCAGTCATGGCTCATTGGGAAAAGCTGCTGCTGTAGGCCAATACAATAGAAGAAGAAATCTTGGTCACCCACCTATATCAATGCCGCCTCATGAATACACATCTCAGCTGACTCAGGGACACCATG-GGGATGGCACCATTAGTAATCACTTTGATGGCTATGCTCGTGGACATTCTGGTTACCCACAAAGTGCACTCCCTAATCCTGGTCATTTCAGTTGGAGACCACATACATGCGCTGGCAGTGGTTTATCAACAGACACTTCGAACCATGGGTCCTTTCCACCATCTCGATACGG-TGGTTTTCCTCCTACGCACTCATCCAATGTGTCAGCAGATACACTGGCTTCCACCTCATCAATACCGGATCCAGCTGATT-GGGATCCAAACTATAGCGAAGAGTCACTTCTGCAAGAGGACACTTCACTATCAGATGCGTTGAGCGATCTCCACCTGAAGGATGCAAGTGGTCAAACAAACCAATCCAGCAGATTGGCCCATATCCAAAGCCATGCTATTGCAAACTCAAACTCTTTATCCATGAATCAAAGAGGTGACCGCCTGTTCCATGCATCAACTC-TTACAGAGAGTAGTGCCTCTACAGGCCATGTGACCTATGATGGTTACCATAATGCAAACTA-TTCTCAGCTGAA-TTTTC-AAAGTCGCCATGGACAACCATTTCAGCGGTATAA-CCATATGACTGCGAGCTACC-TACGTCCAATGGGGAATCATCAC-AATGGTCAGCCTGTATGGCCTAATTA-TGG-CATGGCAGAACCTCCACCTGCTACTATGGCTGACGGAATGCCTTGGGGAGGAAGGCCTGGTCACTCT-TTTACAGCAGGCGGACTGCCGTCTTCCTTTGCAGGAAAGGATTTTGGAAGGATTTTCTAGTATGGATCTGGAGGAATGCCATTCAATTGGTTGCATTAGTAGTTTGTATTTGCAACTCTTGGTTGCATTGCTTACGGGCTGTTGATTTTGCAGTTTGTTGCATTCCTCTAATTGATCCCTTCGC-AATGCTCCGGCTCATAGAACTGTATGGTATGGGTCTGTAATTGTAGCATTCTCTGTTGGTTTCTTCTTTTCGTTTTTGGTTTATTTGTTATACATCGAGCGGAGGCTTCTGCCTGCTGCAAAAACCCAGCGGGAAAAAGAAGTTGAGCAGCCCCTACTTTCAGAATGCCATGC]
[+] EMBL CB640943 [GAGCCACGTGGATTGGGCTGAGGTGGTGGTGGTGGGCATTTGATCTCCGCGGGGGCGGCGGCGATTGGGTGCTGGGAGGCGGTTGCGCGTGTGGTGTATGGAGGTTTCCTGGGAGGTGGACGCGGCGGGGCCGCCGTGGAGGCCGAGTGAGTCCACGGCGTTCCTTCCGTTCGCTTCTGCTGCGGCGGCCGGGGACCGGGCGGGGGCGTCGTTGTCCGGTCGACGCAATGGGCTTGCCGCCCGCTCAAGCAACCTCAGCTCCGTCAGGAAGAGGCCTTTTGTTGCAAGATTAACCACAGACATTGTCCAAACTTTCGGAAAATGCAATCCTGAGTTTAAGTACTCAGATTCACTGAACCCCAAGCGCTTTCTCACCAACCCTTCAGTTCCAGCTC ]
[+] EMBL AK066639 [ GCGGGGCCGCCGTGGAGGCCGAGTGAGTCCACGGCGTTCCTTCCGTTCGCTGCTGCTGCGGCGGCCGGGGACCGGGTGGGGGCGTCGTTGTCCGGTCGACGCGATGGGCTTGCCGCCCGCTCAAGCAACCTCAGCTCCGTCAGGAAGAGGCCTTTTGTTGCAAGATTAACCACAGACATTGTCCAAACTTTCGGAAAATGCAATCCTGAGTTTAAGTACTCAGATTCACTGAACCCCAAGCGCTTTCTCACCAACCCTTCAGTTCCAGCTCACAATGATGGCCTTGATAATGCAAATTCTGACCTCATCTTGTATGTCAACTTGGAATTGGTTAATAAAAAGTCGGACCGGAGGTACGTTATTAAAGAAATGCTTGGCCAAGGTACGTTTGGACAGGTTGCTAAATGCTGGGATGGAGAAACTAACAGCTATGTTGCAGTAAAGGTTATAAAAAATCAGCCTGCCTTTTATCAGCAAGCTATCATGGAGGTCTCACTGTTGAGCATGCTGAATGAGAAATATGATCCTGATGATCAACACCACATTGTCCGGATGCTGGATTTTTTTCTCTACCAAAATCATTTGTGTATAGCATTTGAAATGCTTGGCCATAACCTTTATGAGCTGCTAAAAAGGAATAGTCTAAGAGGTTTGCAACTGAAATATGTCCGAACTTTCTCTAGACAGATATTGGATGCATTGGTTGTCATGAAGGACGCTGGCATTATTCATTGTGATCTAAAACCGGAAAATATTCTCATAACTCCAAATGTAAAAACAGCAGCTGGGGTTAAAGTAATTGATTTTGGATCAGCATGCTTGGAGGGTAAAACCATTTACTCGTATATTCAGAGTCGGTATTACAGATCTCCGGAAGTACTTCTTGGTTACCCATATACCACGGCCATTGATATGTGGTCATTTGGCTGTATAGTCGCTGAACTATATATAGGATTGCTTTTATTTCCTGGAGCGTCAGAATACGATGTCCTATGCCGTATGATTGAGATTCTCGGTGGACAACCACCAGATGATCTGCTACGGGAGGCTAAAAATACTGGGAGATTTTTTAAGCAAGTTGGAAGTATTTATCCTGGTATTGAAATGCAGAATGGCCCTATCAGTGCGTACAGAATATTAACTGAAGAGGAGATTGAAACTAGGGAGTCCAAAAAACCAAAAGTAGGAAGATGGTATTTCCCTCGTGGAAGGCTTGACAAACTCATATATACATACCCTTGGAAGAATTTGAATGGGGAAAACTTGCCAGAGACAGAAAAGACAGATCGCTTAGCACTGGTTGATTTCTTGAGAGGGCTTGTTGAGTTTGATCCTAATAAGCGGTGGTCACCATTGCAGGCTTCATATCATCCCTTCATAACTGGTGAAGCGTTTACTGGTCCATATGAGCCTATCCAGGAGACTCCAAGAATTCCTGTTGGTCGTGTTGCAGCAGTTGATCATAATCCTGGAGGAGGTCACTGGTTAGCTGCTGGTCTTTCCCATCAG GTTGGAAGCATTAACAGAGGCCTACCATTTAATAACGCTTTTGCACCAAAGATTCCCTTTTCATATGGAAGCAGCTGTGGCAGCTTCGGTAGCCATGGTAGCTTTAATGACAATGTAGGTCTTGCAAGCAGCTATGGAAGCTATGATGTCAACAGTGTGAACATGTATCATTCACCACTAGGCCCTTCTGGATTCAATTTACATTCACAAGCCGGAGGAACATTTTTGGGATCTAGTCCAGATATTAGACGACGATCTTATCTCTATCATGGTGGTGGCATTCGATTAAGCCCTGGGTGTCCAGGGCCTATGTCTCTTGGGGCAAGTCCATCACAATTTACTCCACCAAATTCTCAGATGCAAATCCCAAGTACTGCTACAGGAAAGTATGGTTCCACTTCTCCTGCAAGGAGCAGTCATGGCTCATTGGGAAAAGCTGCTGCTGTAGGCCAATACAATAGAAGAAGAAATCTTGGTCACCCACCTATATCAATGCCGCCTCATGAATACACATCTCAGCTGACTCAGGGACACCATG GGGATGGCACCATTAGTAATCACTTTGATGGCTATGCTCGTGGACATTCTGGTTACCCACAAAGTGCACTCCCTAATCCTGGTCATTTCAGTTGGAGACCACATACATGCGCTGGCAGTGGTTTATCAACAGACACTTCGAACCATGGGTCCTTTCCACCATCTCGATACGG TGGTTTTCCTCCTACGCACTCATCCAATGTGTCAGCAGATACACTGGCTTCCACCTCATCAATACCGGATCCAGCTGATT GGGATCCAAACTATAGCGAAGAGTCACTTCTGCAAGAGGACACTTCACTATCAGATGCGTTGAGCGATCTCCACCTGAAGGATGCAAGTGGTCAAACAAACCAATCCAGCAGATTGGCCCATATCCAAAGCCATGCTATTGCAAACTCAAACTCTTTATCCATGAATCAAAGAGGTGACCGCCTGTTCCATGCATCAACTC TTACAGAGAGTAGTGCCTCTACAGGCCATGTGACCTATGATGGTTACCATAATGCAAACTA TTCTCAGCTGAA TTTTC AAAGTCGCCATGGACAACCATTTCAGCGGTATAA CCATATGACTGCGAGCTACC TACGTCCAATGGGGAATCATCAC AATGGTCAGCCTGTATGGCCTAATTA TGG CATGGCAGAACCTCCACCTGCTACTATGGCTGACGGAATGCCTTGGGGAGGAAGGCCTGGTCACTCT TTTACAGCAGGCGGACTGCCGTCTTCCTTTGCAGGAAAGGATTTTGGAAGGATTTTCTAGTATGGATCTGGAGGAATGCCATTCAATTGGTTGCATTAGTAGTTTGTATTTGCAACTCTTGGTTGCATTGCTTACGGGCTGTTGATTTTGCAGTTTGTTGCATTCCTCTAATTGATCCCTTCGC AATGCTCCGGCTCATAGAACTGTATGGTATGGGTCTGTAATTGTAGCATTCTCTGTTGGTTTCTTCTTTTCGTTTTTGGTTTATTTGTTATACATCGAGCGGAGGCTTCTGCCTGCTGCAAAAACCCAGCGGGAAAAAGAAGTTGAGCAGCCCCTACTTTCAGAATGCCATGC]
[+] EMBL CB643411 [ TAGCATTTGAAATGCTTGGCCATAACCTTTATGAGCTGCTAAAAAGGAATAGTCTAAGAGGTTTGCAACTGAAATATGTCCGAACTTTCTCTAGACAGATATTGGATGCATTGGTTGTCATGAAGGACGCTGGCATTATTCATTGTGATCTAAAACCGGAAAATATTCTCATAACTCCAAATGTAAAAACAGCAGCTGGGGTTAAAGTAATTGATTTTGGATCAGCATGCTTGGAGGGTAAAACCATTTACTCGTATATTCAGAGTCGGTATTACAGATCTCCGGAAGTACTTCTTGGTTACCCATATACCACGGCCATTGATATGTGGTCATTTGGCTGTATAGTCGCTGAACTATATATAGGATTGCCTTTATTTCCTGGAGCGTCAGAATACGATGTCCTATGCCGTATGATTGAGATTCTCGGTGGACAACCACCAGATGATCTGCTACGGGAGGCTAAAAATACTGGGAGATTTTTTAAGCAAGTTGGAAGTATTTATCCTGGTATTGAAATGCAGAATGGCCCTATCAGTGCGTACAGAATATTAACTGAAGAGGAGATTGAAACTAGGGAGTCCAAAAAACCAAAAGTAGGAAGATGGTATTTCCCTCGTGGAAGGCTTGACAAACTCATATATACATACCCTTGGAAGAATTTGAATGGGGAAAACTTGCCAGAGACAGAAAAGACAGATCGCTTAGCACTGGTTGATTTCTTGAGAGGGCTTGTTGAGTTTGATCCTAATAAGCGGTGGTCACCATTGCAGGCTTCATATCATCCC ]
[+] EMBL AK104341 [ TTGTTGAGTTTGATCCTAATAAGCGGTGGTCACCATTGCAGGCTTCATATCATCCCTTCATAACTGGTGAAGCGTTTACTGGTCCATATGAGCCTATCCAGGAGACTCCAAGAATTCCTGTTGGTCGTGTTGCAGCAGTTGATCATAATCCTGGAGGAGGTCACTGGTTAGCTGCTGGTCTTTCCCCTCAGGTTGTTGGAAGCATTAACAGAGGCCTACCATTTAATAACGCTTTTGCACCAAAGATTCCCTTTTCATATGGAAGCAGCTGTGGCAGCTTCGGTAGCCATGGTAGCTTTAATGACAATGTAGGTCTTGCAAGCAGCTATGGAAGCTATGATGTCAACAGTGTGAACATGTATCATTCACCACTAGGCCCTTCTGGATTCAATTTACATTCACAAGCCGGAGGAACATTTTTGGGATCTAGTCCAGATATTAGACGACGATCTTATCTCTATCATGGTGGTGGCATTCGATTAAGCCCTGGGTGTCCAGGGCCTATGTCTCTTGGGGCAAGTCCATCACAATTTACTCCACCAAATTCTCAGATGCAAATCCCAAGTACTGCTACAGGAAAGTATGGTTCCACTTCTCCTGCAAGGAGCAGTCATGGCTCATTGGGAAAAGCTGCTGCTGTAGGCCAATACAATAGAAGAAGAAATCTTGGTCACCCACCTATATCAATGCCGCCTCATGAATACACATCTCAGCTGACTCAGGGACACCATG GGGATGGCACCATTAGTAATCACTTTGATGGCTATGCTCGTGGACATTCTGGTTACCCACAAAGTGCACTCCCTAATCCTGGTCATTTCAGTTGGAGACCACATACATGCGCTGGCAGTGGTTTATCAACAGACACTTCGAACCATGGGTCCTTTCCACCATCTCGATACGG TGGTTTTCCTCCTACGCACTCATCCAATGTGTCAGCAGATACACTGGCTTCCACCTCATCAATACCGGATCCAGCTGATT GGGATCCAAACTATAGCGAAGAGTCACTTCTGCAAGAGGACACTTCACTATCAGATGCGTTGAGCGATCTCCACCTGAAGGATGCAAGTGGTCAAACAAACCAATCCAGCAGATTGGCCCATATCCAAAGCCATGCTATTGCAAACTCAAACTCTTTATCCATGAATCAAAGAGGTGACCGCCTGTTCCATGCATCAACTC TTACAGAGAGTAGTGCCTCTACAGGCCATGTGACCTATGATGGTTACCATAATGCAAACTA TTCTCAGCTGAA TTTTC AAAGTCGCCATGGACAACCATTTCAGCGGTATAA CCATATGACTGCGAGCTACC TACGTCCAATGGGGAATCATCAC AATGGTCAGCCTGTATGGCCTAATTA TGG CATGGCAGAACCTCCACCTGCTACTATGGCTGACGGAATGCCTTGGGGAGGAAGGCCTGGTCACTCT TTTACAGCAGGCGGACTGCCGTCTTCCTTTGCAGGAAAGGATTTTGGAAGGATTTTCTAGTATGGATCTGGAGGAATGCCATTCAATTGGTTGCATTAGTAGTTTGTATTTGCAACTCTTGGTTGCATTGCTTACGGGCTGTTGATTTTGCAGTTTGTTGCATTCCTCTAATTGATCCCTTCGC AATGCTCCGGCTCATAGAACTGTATGGTATGGGTCTGTAATTGTAGCATTCTCTGTTGGTTTCTTCTTTTCGTTTTTGGTTTATTTGTTATACATCGAGCGGAGGCTTCTGCCTGCTGCAAAAACCCAGCGGGAAAAAGAAGTTGAGCAGC ]
[+] EMBL AK099652 [ GCAGCTGTGGCAGCTTCGGTAGCCATGGTAGCTTTAATGACAATGTAGGTCTTGCAAGCAGCTATGGAAGCTATGATGTCAACAGTGTGAACATGTATCATTCACCACTAGGCCCTTCTGGATTCAATTTACATTCACAAGCCGGAGGAACATTTTTGGGATCTAGTCCAGATATTAGACGACGATCTTATCTCTATCATGGTGGTGGCATTCGATTAAGCCCTGGGTGTCCAGGGCCTATGTCTCTTGGGGCAAGTCCATCACAATTTACTCCACCAAATTCTCAGATGCAAATCCCAAGTACTGCTACAGGAAAGTATGGTTCCACTTCTCCTGCAAGGAGCAGTCATGGCTCATTGGGAAAAGCTGCTGCTGTAGGCCAATACAATAGAAGAAGAAATCTTGGTCACCCACCTATATCAATGCCGCCTCATGAATACACATCTCAGCTGACTCAGGGACACCATG GGGATGGCACCATTAGTAATCACTTTGATGGCTATGCTCGTGGACATTCTGGTTACCCACAAAGTGCACTCCCTAATCCTGGTCATTTCAGTTGGAGACCACATACATGCGCTGGCAGTGGTTTATCAACAGACACTTCGAACCATGGGTCCTTTCCACCATCTCGATACGG TGGTTTTCCTCCTACGCACTCATCCAATGTGTCAGCAGATACACTGGCTTCCACCTCATCAATACCGGATCCAGCTGATT GGGATCCAAACTATAGCGAAGAGTCACTTCTGCAAGAGGACACTTCACTATCAGATGCGTTGAGCGATCTCCACCTGAAGGATGCAAGTGGTCAAACAAACCAATCCAGCAGATTGGCCCATATCCAAAGCCATGCTATTGCAAACTCAAACTCTTTATCCATGAATCAAAGAGGTGACCGCCTGTTCCATGCATCAACTC TTACAGAGAGTAGTGCCTCTACAGGCCATGTGACCTATGATGGTTACCATAATGCAAACTA TTCTCAGCTGAA TTTTC AAAGTCGCCATGGACAACCATTTCAGCGGTATAA CCATATGACTGCGAGCTACC TACGTCCAATGGGGAATCATCAC AATGGTCAGCCTGTATGGCCTAATTA TGG CATGGCAGAACCTCCACCTGCTACTATGGCTGACGGAATGCCTTGGGGAGGAAGGCCTGGTCACTCT TTTACAGCAGGCGGACTGCCGTCTTCCTTTGCAGGAAAGGATTTTGGAAGGATTTTCTAGTATGGATCTGGAGGAATGCCATTCAATTGGTTGCATTAGTAGTTTGTATTTGCAACTCTTGGTTGCATTGCTTACGGGCTGTTGATTTTGCAGTTTGTTGCATTCCTCTAATTGATCCCTTCGC AATGCTCCGGCTCATAGAACTGTATGGTATGGGTCTGTAATTGTAGCATTCTCTGTTGGTTTCTTCTTTTCGTTTTTGGTTTATTTGTTATACATCGAGCGGAGGCTTCTGCCTGCTGCAAAAACCCAGCGGGAAAAAGAAGTTGAGCAGC ]
[+] EMBL CF322605 [ TCTCTTGGGGCAAGTCCATCACAATTTACTCCACCAAATTCTCAGATGCAAATCCCAAGTACTGCTACAGGAAAGTATGGTTCCACTTCTCCTGCAAGGAGCAGTCATGGCTCATTGGGAAAAGCTGCTGCTGTAGGCCAATACAATAGAAGAAGAAATCTTGGTCACCCACCTATATCAATGCCGCCTCATGAATACACATCTCAGCTGACTCAGGGACACCATGNGGGATGGCACCATTAGTAATCACTTTGATGGCTATGCTCGTGGACATTCTGGTTACCCACAAAGTGCACTCCCTAATCCTGGTCATTTCAGTTGGAGACCACATACATGCGCTGGCAGTGGTTTATCAACAGACACTTCGAACCATGGGTCCTTTCCACCATCTC ATACGGTTGGTTTTCCTCCTACGCACTCATCCAATGTGTCAGCAGATACACTGGCTTCCACCTCATCAATACCGGATCCAGCTGATTGGGGATCCAAACTATAGCGAAGAGTCACTTCTGCAAGAGGACA ]
[+] EMBL BE040551 [ CTCTTGGGGCAAGTCCATCACAATTTACTCCACCAAGTTCTCAGATGCAAATCCCAAGTACTGCTACAGGAAAGTATGGTTCCACTTCTCTTGCAAGGAGCAGTCATGGCTCATTGGGAAAAGCTGCTGCCGTAGGCCAATACAATAGAAGAAGAAATCTTGGTCACCCACCTATATCAATGCCGCCTCATGAATACACATCTCAGCTGATCCAGGGACACCATG GGGATGGCACC ]
[+] EMBL AK066790 [ ACCCACCTATATCAATGCCGCCTCATGAATACACATCTCAGCTGACTCAGGGACACCATG GGGATGGCACCATTAGTAATCACTTTGATGGCTATGCTCGTGGACATTCTGGTTACCCACAAAGTGCACTCCCTAATCCTGGTCATTTCAGTTGGAGACCACATACATGCGCTGGCAGTGGTTTATCAACAGACACTTCGAACCATGGGTCCTTTCCACCATCTCGATACGG TGGTTTTCCTCCTACGCACTCATCCAATGTGTCAGCAGATACACTGGCTTCCACCTCATCAATACCGGATCCAGCTGATT GGGATCCAAACTATAGCGAAGAGTCACTTCTGCAAGAGGACACTTCACTATCAGATGCGTTGAGCGATCTCCACCTGAAGGATGCAAGTGGTCAAACAAACCAATCCAGCAGATTGGCCCATATCCAAAGCCATGCTATTGCAAACTCAAACTCTTTATCCATGAATCAAAGAGGTGACCGCCTGTTCCATGCATCAACTC TTACAGAGAGTAGTGCCTCTACAGGCCATGTGACCTATGATGGTTACCATAATGCAAACTA TTCTCAGCTGAA TTTTC AAAGTCGCCATGGACAACCATTTCAGCGGTATAA CCATATGACTGCGAGCTACC TACGTCCAATGGGGAATCATCAC AATGGTCAGCCTGTATGGCCTAATTA TGG CATGGCAGAACCTCCACCTGCTACTATGGCTGACGGAATGCCTTGGGGAGGAAGGCCTGGTCACTCT TTTACAGCAGGCGGACTGCCGTCTTCCTTTGCAGGAAAGGATTTTGGAAGGATTTTCTAGTATGGATCTGGAGGAATGCCATTCAATTGGTTGCATTAGTAGTTTGTATTTGCAACTCTTGGTTGCATTGCTTACGGGCTGTTGATTTTGCAGTTTGTTGCATTCCTCTAATTGATCCCTTCGC AATGCTCCGGCTCATAGAACTGTATGGTATGGGTCTGTAATTGTAGCATTCTCTGTTGGTTTCTTCTTTTCGTTTTTGGTTTATTTGTTATACATCGAGCGGAGGCTTCTGCCTGCTGCAAAAACCCAGCGGGAAAAAGAAGTTGAGCAGC ]
[-] EMBL CB643412 [ ACTGGCTTCCACCTCATCAATACCGGATCCAGCTGATT GGGATCCAAACTATAGCGAAGAGTCACTTCTGCAAGAGGACACTTCACTATCAGATGCGTTGAGCGATCTCCACCTGAAGGATGCAAGTGGTCAAACAAACCAATCCAGCAGATTGGCCCATATCCAAAGCCATGCTATTGCAAACTCAAACTCTTTATCCATGAATCAAAGAGGTGACCGCCTGTTCCATGCATCAACTC TTACAGAGAGTAGTGCCTCTACAGGCCATGTGACCTATGATGGTTACCATAATGCAAACTA TTCTCAGCTGAA TTTTC AAAGTCGCCATGGACAACCATTTCAGCGGTATAA CCATATGACTGCGAGCTACC TACGTCCAATGGGGAATCATCAC AATGGTCAGCCTGTATGGCCTAATTA TGG CATGGCAGAACCTCCACCTGCTACTATGGCTGACGGAATGCCTTGGGGAGGAAGGCCTGGTCACTCT TTTACAGCAGGCGGACTGCCGTCTTCCTTTGCAGGAAAGGATTTTGGAAGGATTTTTTAGTATGGATCTGGAGGAATGCCATTCAATTGGTTGCATTAGTAGTTTGTATTTGCAACTCTTGGTTGCATTGCTTACGGGCTGTTGATTTTGCAGTTTGTTGCATTCCTCTAATTGATCCCTTCGC AATGCTCCGGCTCATAGAACTGTATGGTATGGGTCTGTAATTGTAGCATTCTCTGTTGGTTTCTTCTTGTGGTTTTTGGT ]
[-] EMBL CB627314 [ GTGGTCAAACAAACCAATCCAGCAGATGGGCCCATATCCAAAGCCATGCTATTGCAAACTCAAACTCTTTATCCATGAATCAAAGAGGTGACCACCTGTTCCATGCATCAACTC TTACAGAGACTAGTGCCTCTACAGGCCATGTGACCTATGATGGTTACCATAATGCAAACTA TTCTCAGCTGAA TTTTC AAAGTCGCCATGGACAACCATTTCAGCGGTATAA CCATATGACTGCCAGCTACC TACGTCCAATGGGGAATCATCAC AATGGTCAGCCTGTATGGCCTAATTA TGG CATGGCAGAACCTCCACCTGCTACTATGGCTGACGGAATGCCTTGGGGAGGAAGGCCTGGTCACTCT TTTACAGCAGGCGGACTGCCGTCTTCCTTTGCAGGAAAGGATTTTGGAAGGATTTTCTAGTATGGATCTGGAGGAATGCCATTCAATTGGTTGCATTAGTAGTTTGTATTTGCAACTCTTGGTTGCATTGCTTACGGGCTGTTGATTTTGCAGTTTGTTGCATTCCTCTAATTGATCCCTTCGC AATGCTCCGGCTCATAGAACTGTATGGTATGGGTCTGTAATTGTAGCATTCTCTGTTGGTTTCTTCTTTTCGTTTTTGGTTTATTTGTTATACATCGAGCGGAGGCTTCTGCCTGCTGCAAAAGCCCAGCGGGAAAAAGAAGTTGAGCAGCCCCT ]
[+] EMBL D43013 [ GCAGATTGGTNCATATCCAAAGCCATGCTATTGCAAACTCAAACTCTTTATCCATGAATCAAAGAGGTGACCGCCTGTTCCATGCATCAACTCTTTACAGNGAGTAGTGCCTCTACAGGCCATGTGACCTNTGATGGTTACCATAATGCAAACTATTTCTCAGCTGAATTTTTCAAAAGTCGCCATGGACAACCATTTCAGCGGTATAACCCATATGNCTGCGAGCTACCTTACGTNCAATGGGGAATCATCACAAATGGTCAGNCTGTATGGGCTAATTATTGGNAATGGCAGANCCTCCACCTGCTACTATGGCTGACGGga ]
[+] EMBL BI812732 [ CATATGACT CCAGCTACC TACGTCCAAT GGGAATCATCAC AATGGTCAGCCTGTATGGCCTAATTA TGG CAT GCAGAACCTCCACCTGCTACTAT GCTGACGGAAT CCTTGGGGAGGAA GCCTGGTCACTCTGTTTACAGCA GCGGACTGCCGTCTTCCTTT CAGGAAAGGATTTTGGAAGGATTTTCTAGTATGGATCTGGAGGAAT CCATTCAATTGGTTGCATTAGTAGTTTGTATTTGCAACTCTTGGTTGCATTGCTTACGGGCTGTTGATTTT CAGTTTGTTGCATTCCTCTAATTGATCCCTTCGCAAATGCTCCGGCTCATAGAACTGTATGGTATGGGTCTGTAATTGTAGCATTCTCTGTTGGTTTCTTCTTTTCGTTTTTGGTTTATTTGTTATACATCGAGCGGAGGCTTCTGCCTGCTGCAAAAACCCAGCGGGAAAAAGAAGTTGAGCAGCCCCTACTTTCAAAAaaaaaa ]
consensusID : consensus_13687#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 421 fasta sequence
[CATCACAATGGTCAGCCTGTATGGCCTAATTATGGCATGGCAGAACCTCCACCTGCTACTTTGGCTGACGGAATGCCTTGGGGAGGAAGGCCTGGTCACTCTTTTACAGCAGGGGGACTGCCGTCTTCCTTTGCAGGAAAGGATTTTGGAAGGATTTTCTAGTATGGATCTGGAGGAATGCCATTCAATTGGTTGCATTAGTAGTGTGTATTTGCAACTCTTGGTTGCATTGATTACGGGCTGTTGATTTTGCAGTTTGTTGCATTCCTGTAATTGATCCTTTCGCAATGCTCCGGCTCATAGAACTGTATGGTATGGGTCTGTAATTGTAGCATTGTGGTGTTGGTTTGTTCTTTTCGTTTTTGGTTTATTTGTTATACATCGAGTGGGGAGTCCAAAATCAATTACTTTAACGCCCAGC]
[-] EMBL CB627313 [CATCACAATGGTCAGCCTGTATGGCCTAATTATGGCATGGCAGAACCTCCACCTGCTACTTTGGCTGACGGAATGCCTTGGGGAGGAAGGCCTGGTCACTCTTTTACAGCAGGGGGACTGCCGTCTTCCTTTGCAGGAAAGGATTTTGGAAGGATTTTCTAGTATGGATCTGGAGGAATGCCATTCAATTGGTTGCATTAGTAGTGTGTATTTGCAACTCTTGGTTGCATTGATTACGGGCTGTTGATTTTGCAGTTTGTTGCATTCCTGTAATTGATCCTTTCGCAATGCTCCGGCTCATAGAACTGTATGGTATGGGTCTGTAATTGTAGCATTGTGGTGTTGGTTTGTTCTTTTCGTTTTTGGTTTATTTGTTATACATCGAGTGGGGAGTCCAAAATCAATTACTTTAACGCCCAGC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_13687#0 GAGCCACGTGGATTGGGCTGAGGTGGTGGTGGTGGGCATTTGATCTCCGCGGGGGCGGCG 60
consensus_13687#1 ------------------------------------------------------------
consensus_13687#0 GCGATTGGGTGCTGGGAGGCGGTTGCGCGTGTGGTGTATGGAGGTTTCCTGGGAGGTGGA 120
consensus_13687#1 ------------------------------------------------------------
consensus_13687#0 CGCGGCGGGGCCGCCGTGGAGGCCGAGTGAGTCCACGGCGTTCCTTCCGTTCGCTTCTGC 180
consensus_13687#1 ------------------------------------------------------------
consensus_13687#0 TGCGGCGGCCGGGGACCGGGCGGGGGCGTCGTTGTCCGGTCGACGCAATGGGCTTGCCGC 240
consensus_13687#1 ------------------------------------------------------------
consensus_13687#0 CCGCTCAAGCAACCTCAGCTCCGTCAGGAAGAGGCCTTTTGTTGCAAGATTAACCACAGA 300
consensus_13687#1 ------------------------------------------------------------
consensus_13687#0 CATTGTCCAAACTTTCGGAAAATGCAATCCTGAGTTTAAGTACTCAGATTCACTGAACCC 360
consensus_13687#1 ------------------------------------------------------------
consensus_13687#0 CAAGCGCTTTCTCACCAACCCTTCAGTTCCAGCTCACAATGATGGCCTTGATAATGCAAA 420
consensus_13687#1 ------------------------------------------------------------
consensus_13687#0 TTCTGACCTCATCTTGTATGTCAACTTGGAATTGGTTAATAAAAAGTCGGACCGGAGGTA 480
consensus_13687#1 ------------------------------------------------------------
consensus_13687#0 CGTTATTAAAGAAATGCTTGGCCAAGGTACGTTTGGACAGGTTGCTAAATGCTGGGATGG 540
consensus_13687#1 ------------------------------------------------------------
consensus_13687#0 AGAAACTAACAGCTATGTTGCAGTAAAGGTTATAAAAAATCAGCCTGCCTTTTATCAGCA 600
consensus_13687#1 ------------------------------------------------------------
consensus_13687#0 AGCTATCATGGAGGTCTCACTGTTGAGCATGCTGAATGAGAAATATGATCCTGATGATCA 660
consensus_13687#1 ------------------------------------------------------------
consensus_13687#0 ACACCACATTGTCCGGATGCTGGATTTTTTTCTCTACCAAAATCATTTGTGTATAGCATT 720
consensus_13687#1 ------------------------------------------------------------
consensus_13687#0 TGAAATGCTTGGCCATAACCTTTATGAGCTGCTAAAAAGGAATAGTCTAAGAGGTTTGCA 780
consensus_13687#1 ------------------------------------------------------------
consensus_13687#0 ACTGAAATATGTCCGAACTTTCTCTAGACAGATATTGGATGCATTGGTTGTCATGAAGGA 840
consensus_13687#1 ------------------------------------------------------------
consensus_13687#0 CGCTGGCATTATTCATTGTGATCTAAAACCGGAAAATATTCTCATAACTCCAAATGTAAA 900
consensus_13687#1 ------------------------------------------------------------
consensus_13687#0 AACAGCAGCTGGGGTTAAAGTAATTGATTTTGGATCAGCATGCTTGGAGGGTAAAACCAT 960
consensus_13687#1 ------------------------------------------------------------
consensus_13687#0 TTACTCGTATATTCAGAGTCGGTATTACAGATCTCCGGAAGTACTTCTTGGTTACCCATA 1020
consensus_13687#1 ------------------------------------------------------------
consensus_13687#0 TACCACGGCCATTGATATGTGGTCATTTGGCTGTATAGTCGCTGAACTATATATAGGATT 1080
consensus_13687#1 ------------------------------------------------------------
consensus_13687#0 GCTTTTATTTCCTGGAGCGTCAGAATACGATGTCCTATGCCGTATGATTGAGATTCTCGG 1140
consensus_13687#1 ------------------------------------------------------------
consensus_13687#0 TGGACAACCACCAGATGATCTGCTACGGGAGGCTAAAAATACTGGGAGATTTTTTAAGCA 1200
consensus_13687#1 ------------------------------------------------------------
consensus_13687#0 AGTTGGAAGTATTTATCCTGGTATTGAAATGCAGAATGGCCCTATCAGTGCGTACAGAAT 1260
consensus_13687#1 ------------------------------------------------------------
consensus_13687#0 ATTAACTGAAGAGGAGATTGAAACTAGGGAGTCCAAAAAACCAAAAGTAGGAAGATGGTA 1320
consensus_13687#1 ------------------------------------------------------------
consensus_13687#0 TTTCCCTCGTGGAAGGCTTGACAAACTCATATATACATACCCTTGGAAGAATTTGAATGG 1380
consensus_13687#1 ------------------------------------------------------------
consensus_13687#0 GGAAAACTTGCCAGAGACAGAAAAGACAGATCGCTTAGCACTGGTTGATTTCTTGAGAGG 1440
consensus_13687#1 ------------------------------------------------------------
consensus_13687#0 GCTTGTTGAGTTTGATCCTAATAAGCGGTGGTCACCATTGCAGGCTTCATATCATCCCTT 1500
consensus_13687#1 ------------------------------------------------------------
consensus_13687#0 CATAACTGGTGAAGCGTTTACTGGTCCATATGAGCCTATCCAGGAGACTCCAAGAATTCC 1560
consensus_13687#1 ------------------------------------------------------------
consensus_13687#0 TGTTGGTCGTGTTGCAGCAGTTGATCATAATCCTGGAGGAGGTCACTGGTTAGCTGCTGG 1620
consensus_13687#1 ------------------------------------------------------------
consensus_13687#0 TCTTTCCCATCAGGTTGGAAGCATTAACAGAGGCCTACCATTTAATAACGCTTTTGCACC 1680
consensus_13687#1 ------------------------------------------------------------
consensus_13687#0 AAAGATTCCCTTTTCATATGGAAGCAGCTGTGGCAGCTTCGGTAGCCATGGTAGCTTTAA 1740
consensus_13687#1 ------------------------------------------------------------
consensus_13687#0 TGACAATGTAGGTCTTGCAAGCAGCTATGGAAGCTATGATGTCAACAGTGTGAACATGTA 1800
consensus_13687#1 ------------------------------------------------------------
consensus_13687#0 TCATTCACCACTAGGCCCTTCTGGATTCAATTTACATTCACAAGCCGGAGGAACATTTTT 1860
consensus_13687#1 ------------------------------------------------------------
consensus_13687#0 GGGATCTAGTCCAGATATTAGACGACGATCTTATCTCTATCATGGTGGTGGCATTCGATT 1920
consensus_13687#1 ------------------------------------------------------------
consensus_13687#0 AAGCCCTGGGTGTCCAGGGCCTATGTCTCTTGGGGCAAGTCCATCACAATTTACTCCACC 1980
consensus_13687#1 ------------------------------------------------------------
consensus_13687#0 AAATTCTCAGATGCAAATCCCAAGTACTGCTACAGGAAAGTATGGTTCCACTTCTCCTGC 2040
consensus_13687#1 ------------------------------------------------------------
consensus_13687#0 AAGGAGCAGTCATGGCTCATTGGGAAAAGCTGCTGCTGTAGGCCAATACAATAGAAGAAG 2100
consensus_13687#1 ------------------------------------------------------------
consensus_13687#0 AAATCTTGGTCACCCACCTATATCAATGCCGCCTCATGAATACACATCTCAGCTGACTCA 2160
consensus_13687#1 ------------------------------------------------------------
consensus_13687#0 GGGACACCATGGGGATGGCACCATTAGTAATCACTTTGATGGCTATGCTCGTGGACATTC 2220
consensus_13687#1 ------------------------------------------------------------
consensus_13687#0 TGGTTACCCACAAAGTGCACTCCCTAATCCTGGTCATTTCAGTTGGAGACCACATACATG 2280
consensus_13687#1 ------------------------------------------------------------
consensus_13687#0 CGCTGGCAGTGGTTTATCAACAGACACTTCGAACCATGGGTCCTTTCCACCATCTCGATA 2340
consensus_13687#1 ------------------------------------------------------------
consensus_13687#0 CGGTGGTTTTCCTCCTACGCACTCATCCAATGTGTCAGCAGATACACTGGCTTCCACCTC 2400
consensus_13687#1 ------------------------------------------------------------
consensus_13687#0 ATCAATACCGGATCCAGCTGATTGGGATCCAAACTATAGCGAAGAGTCACTTCTGCAAGA 2460
consensus_13687#1 ------------------------------------------------------------
consensus_13687#0 GGACACTTCACTATCAGATGCGTTGAGCGATCTCCACCTGAAGGATGCAAGTGGTCAAAC 2520
consensus_13687#1 ------------------------------------------------------------
consensus_13687#0 AAACCAATCCAGCAGATTGGCCCATATCCAAAGCCATGCTATTGCAAACTCAAACTCTTT 2580
consensus_13687#1 ------------------------------------------------------------
consensus_13687#0 ATCCATGAATCAAAGAGGTGACCGCCTGTTCCATGCATCAACTCTTACAGAGAGTAGTGC 2640
consensus_13687#1 ------------------------------------------------------------
consensus_13687#0 CTCTACAGGCCATGTGACCTATGATGGTTACCATAATGCAAACTATTCTCAGCTGAATTT 2700
consensus_13687#1 ------------------------------------------------------------
consensus_13687#0 TCAAAGTCGCCATGGACAACCATTTCAGCGGTATAACCATATGACTGCGAGCTACCTACG 2760
consensus_13687#1 ------------------------------------------------------------
consensus_13687#0 TCCAATGGGGAATCATCACAATGGTCAGCCTGTATGGCCTAATTATGGCATGGCAGAACC 2820
consensus_13687#1 -------------CATCACAATGGTCAGCCTGTATGGCCTAATTATGGCATGGCAGAACC 47
***********************************************
consensus_13687#0 TCCACCTGCTACTATGGCTGACGGAATGCCTTGGGGAGGAAGGCCTGGTCACTCTTTTAC 2880
consensus_13687#1 TCCACCTGCTACTTTGGCTGACGGAATGCCTTGGGGAGGAAGGCCTGGTCACTCTTTTAC 107
************* **********************************************
consensus_13687#0 AGCAGGCGGACTGCCGTCTTCCTTTGCAGGAAAGGATTTTGGAAGGATTTTCTAGTATGG 2940
consensus_13687#1 AGCAGGGGGACTGCCGTCTTCCTTTGCAGGAAAGGATTTTGGAAGGATTTTCTAGTATGG 167
****** *****************************************************
consensus_13687#0 ATCTGGAGGAATGCCATTCAATTGGTTGCATTAGTAGTTTGTATTTGCAACTCTTGGTTG 3000
consensus_13687#1 ATCTGGAGGAATGCCATTCAATTGGTTGCATTAGTAGTGTGTATTTGCAACTCTTGGTTG 227
************************************** *********************
consensus_13687#0 CATTGCTTACGGGCTGTTGATTTTGCAGTTTGTTGCATTCCTCTAATTGATCCCTTCGCA 3060
consensus_13687#1 CATTGATTACGGGCTGTTGATTTTGCAGTTTGTTGCATTCCTGTAATTGATCCTTTCGCA 287
***** ************************************ ********** ******
consensus_13687#0 ATGCTCCGGCTCATAGAACTGTATGGTATGGGTCTGTAATTGTAGCATTCTC-TGTTGGT 3119
consensus_13687#1 ATGCTCCGGCTCATAGAACTGTATGGTATGGGTCTGTAATTGTAGCATTGTGGTGTTGGT 347
************************************************* * *******
consensus_13687#0 TTCTTCTTTTCGTTTTTGGTTTATTTGTTATACATCGAGCGGAGGCTTCTG--CCTGCTG 3177
consensus_13687#1 TTGTTCTTTTCGTTTTTGGTTTATTTGTTATACATCGAGTGGGGAGTCCAAAATCAATTA 407
** ************************************ ** * * * * *
consensus_13687#0 CA--AAAACCCAGCGGGAAAAAGAAGTTGAGCAGCCCCTACTTTCAGAATGCCATGC 3232
consensus_13687#1 CTTTAACGCCCAGC------------------------------------------- 421
* ** ******
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||