These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13687#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 3232 fasta sequence [GAGCCACGTGGATTGGGCTGAGGTGGTGGTGGTGGGCATTTGATCTCCGCGGGGGCGGCGGCGATTGGGTGCTGGGAGGCGGTTGCGCGTGTGGTGTATGGAGGTTTCCTGGGAGGTGGACGCGGCGGGGCCGCCGTGGAGGCCGAGTGAGTCCACGGCGTTCCTTCCGTTCGCTTCTGCTGCGGCGGCCGGGGACCGGGCGGGGGCGTCGTTGTCCGGTCGACGCAATGGGCTTGCCGCCCGCTCAAGCAACCTCAGCTCCGTCAGGAAGAGGCCTTTTGTTGCAAGATTAACCACAGACATTGTCCAAACTTTCGGAAAATGCAATCCTGAGTTTAAGTACTCAGATTCACTGAACCCCAAGCGCTTTCTCACCAACCCTTCAGTTCCAGCTCACAATGATGGCCTTGATAATGCAAATTCTGACCTCATCTTGTATGTCAACTTGGAATTGGTTAATAAAAAGTCGGACCGGAGGTACGTTATTAAAGAAATGCTTGGCCAAGGTACGTTTGGACAGGTTGCTAAATGCTGGGATGGAGAAACTAACAGCTATGTTGCAGTAAAGGTTATAAAAAATCAGCCTGCCTTTTATCAGCAAGCTATCATGGAGGTCTCACTGTTGAGCATGCTGAATGAGAAATATGATCCTGATGATCAACACCACATTGTCCGGATGCTGGATTTTTTTCTCTACCAAAATCATTTGTGTATAGCATTTGAAATGCTTGGCCATAACCTTTATGAGCTGCTAAAAAGGAATAGTCTAAGAGGTTTGCAACTGAAATATGTCCGAACTTTCTCTAGACAGATATTGGATGCATTGGTTGTCATGAAGGACGCTGGCATTATTCATTGTGATCTAAAACCGGAAAATATTCTCATAACTCCAAATGTAAAAACAGCAGCTGGGGTTAAAGTAATTGATTTTGGATCAGCATGCTTGGAGGGTAAAACCATTTACTCGTATATTCAGAGTCGGTATTACAGATCTCCGGAAGTACTTCTTGGTTACCCATATACCACGGCCATTGATATGTGGTCATTTGGCTGTATAGTCGCTGAACTATATATAGGATTGCTTTTATTTCCTGGAGCGTCAGAATACGATGTCCTATGCCGTATGATTGAGATTCTCGGTGGACAACCACCAGATGATCTGCTACGGGAGGCTAAAAATACTGGGAGATTTTTTAAGCAAGTTGGAAGTATTTATCCTGGTATTGAAATGCAGAATGGCCCTATCAGTGCGTACAGAATATTAACTGAAGAGGAGATTGAAACTAGGGAGTCCAAAAAACCAAAAGTAGGAAGATGGTATTTCCCTCGTGGAAGGCTTGACAAACTCATATATACATACCCTTGGAAGAATTTGAATGGGGAAAACTTGCCAGAGACAGAAAAGACAGATCGCTTAGCACTGGTTGATTTCTTGAGAGGGCTTGTTGAGTTTGATCCTAATAAGCGGTGGTCACCATTGCAGGCTTCATATCATCCCTTCATAACTGGTGAAGCGTTTACTGGTCCATATGAGCCTATCCAGGAGACTCCAAGAATTCCTGTTGGTCGTGTTGCAGCAGTTGATCATAATCCTGGAGGAGGTCACTGGTTAGCTGCTGGTCTTTCCCATCAG---GTTGGAAGCATTAACAGAGGCCTACCATTTAATAACGCTTTTGCACCAAAGATTCCCTTTTCATATGGAAGCAGCTGTGGCAGCTTCGGTAGCCATGGTAGCTTTAATGACAATGTAGGTCTTGCAAGCAGCTATGGAAGCTATGATGTCAACAGTGTGAACATGTATCATTCACCACTAGGCCCTTCTGGATTCAATTTACATTCACAAGCCGGAGGAACATTTTTGGGATCTAGTCCAGATATTAGACGACGATCTTATCTCTATCATGGTGGTGGCATTCGATTAAGCCCTGGGTGTCCAGGGCCTATGTCTCTTGGGGCAAGTCCATCACAATTTACTCCACCAAATTCTCAGATGCAAATCCCAAGTACTGCTACAGGAAAGTATGGTTCCACTTCTCCTGCAAGGAGCAGTCATGGCTCATTGGGAAAAGCTGCTGCTGTAGGCCAATACAATAGAAGAAGAAATCTTGGTCACCCACCTATATCAATGCCGCCTCATGAATACACATCTCAGCTGACTCAGGGACACCATG-GGGATGGCACCATTAGTAATCACTTTGATGGCTATGCTCGTGGACATTCTGGTTACCCACAAAGTGCACTCCCTAATCCTGGTCATTTCAGTTGGAGACCACATACATGCGCTGGCAGTGGTTTATCAACAGACACTTCGAACCATGGGTCCTTTCCACCATCTCGATACGG-TGGTTTTCCTCCTACGCACTCATCCAATGTGTCAGCAGATACACTGGCTTCCACCTCATCAATACCGGATCCAGCTGATT-GGGATCCAAACTATAGCGAAGAGTCACTTCTGCAAGAGGACACTTCACTATCAGATGCGTTGAGCGATCTCCACCTGAAGGATGCAAGTGGTCAAACAAACCAATCCAGCAGATTGGCCCATATCCAAAGCCATGCTATTGCAAACTCAAACTCTTTATCCATGAATCAAAGAGGTGACCGCCTGTTCCATGCATCAACTC-TTACAGAGAGTAGTGCCTCTACAGGCCATGTGACCTATGATGGTTACCATAATGCAAACTA-TTCTCAGCTGAA-TTTTC-AAAGTCGCCATGGACAACCATTTCAGCGGTATAA-CCATATGACTGCGAGCTACC-TACGTCCAATGGGGAATCATCAC-AATGGTCAGCCTGTATGGCCTAATTA-TGG-CATGGCAGAACCTCCACCTGCTACTATGGCTGACGGAATGCCTTGGGGAGGAAGGCCTGGTCACTCT-TTTACAGCAGGCGGACTGCCGTCTTCCTTTGCAGGAAAGGATTTTGGAAGGATTTTCTAGTATGGATCTGGAGGAATGCCATTCAATTGGTTGCATTAGTAGTTTGTATTTGCAACTCTTGGTTGCATTGCTTACGGGCTGTTGATTTTGCAGTTTGTTGCATTCCTCTAATTGATCCCTTCGC-AATGCTCCGGCTCATAGAACTGTATGGTATGGGTCTGTAATTGTAGCATTCTCTGTTGGTTTCTTCTTTTCGTTTTTGGTTTATTTGTTATACATCGAGCGGAGGCTTCTGCCTGCTGCAAAAACCCAGCGGGAAAAAGAAGTTGAGCAGCCCCTACTTTCAGAATGCCATGC] [+] EMBL CB640943 [GAGCCACGTGGATTGGGCTGAGGTGGTGGTGGTGGGCATTTGATCTCCGCGGGGGCGGCGGCGATTGGGTGCTGGGAGGCGGTTGCGCGTGTGGTGTATGGAGGTTTCCTGGGAGGTGGACGCGGCGGGGCCGCCGTGGAGGCCGAGTGAGTCCACGGCGTTCCTTCCGTTCGCTTCTGCTGCGGCGGCCGGGGACCGGGCGGGGGCGTCGTTGTCCGGTCGACGCAATGGGCTTGCCGCCCGCTCAAGCAACCTCAGCTCCGTCAGGAAGAGGCCTTTTGTTGCAAGATTAACCACAGACATTGTCCAAACTTTCGGAAAATGCAATCCTGAGTTTAAGTACTCAGATTCACTGAACCCCAAGCGCTTTCTCACCAACCCTTCAGTTCCAGCTC ] [+] EMBL AK066639 [ GCGGGGCCGCCGTGGAGGCCGAGTGAGTCCACGGCGTTCCTTCCGTTCGCTGCTGCTGCGGCGGCCGGGGACCGGGTGGGGGCGTCGTTGTCCGGTCGACGCGATGGGCTTGCCGCCCGCTCAAGCAACCTCAGCTCCGTCAGGAAGAGGCCTTTTGTTGCAAGATTAACCACAGACATTGTCCAAACTTTCGGAAAATGCAATCCTGAGTTTAAGTACTCAGATTCACTGAACCCCAAGCGCTTTCTCACCAACCCTTCAGTTCCAGCTCACAATGATGGCCTTGATAATGCAAATTCTGACCTCATCTTGTATGTCAACTTGGAATTGGTTAATAAAAAGTCGGACCGGAGGTACGTTATTAAAGAAATGCTTGGCCAAGGTACGTTTGGACAGGTTGCTAAATGCTGGGATGGAGAAACTAACAGCTATGTTGCAGTAAAGGTTATAAAAAATCAGCCTGCCTTTTATCAGCAAGCTATCATGGAGGTCTCACTGTTGAGCATGCTGAATGAGAAATATGATCCTGATGATCAACACCACATTGTCCGGATGCTGGATTTTTTTCTCTACCAAAATCATTTGTGTATAGCATTTGAAATGCTTGGCCATAACCTTTATGAGCTGCTAAAAAGGAATAGTCTAAGAGGTTTGCAACTGAAATATGTCCGAACTTTCTCTAGACAGATATTGGATGCATTGGTTGTCATGAAGGACGCTGGCATTATTCATTGTGATCTAAAACCGGAAAATATTCTCATAACTCCAAATGTAAAAACAGCAGCTGGGGTTAAAGTAATTGATTTTGGATCAGCATGCTTGGAGGGTAAAACCATTTACTCGTATATTCAGAGTCGGTATTACAGATCTCCGGAAGTACTTCTTGGTTACCCATATACCACGGCCATTGATATGTGGTCATTTGGCTGTATAGTCGCTGAACTATATATAGGATTGCTTTTATTTCCTGGAGCGTCAGAATACGATGTCCTATGCCGTATGATTGAGATTCTCGGTGGACAACCACCAGATGATCTGCTACGGGAGGCTAAAAATACTGGGAGATTTTTTAAGCAAGTTGGAAGTATTTATCCTGGTATTGAAATGCAGAATGGCCCTATCAGTGCGTACAGAATATTAACTGAAGAGGAGATTGAAACTAGGGAGTCCAAAAAACCAAAAGTAGGAAGATGGTATTTCCCTCGTGGAAGGCTTGACAAACTCATATATACATACCCTTGGAAGAATTTGAATGGGGAAAACTTGCCAGAGACAGAAAAGACAGATCGCTTAGCACTGGTTGATTTCTTGAGAGGGCTTGTTGAGTTTGATCCTAATAAGCGGTGGTCACCATTGCAGGCTTCATATCATCCCTTCATAACTGGTGAAGCGTTTACTGGTCCATATGAGCCTATCCAGGAGACTCCAAGAATTCCTGTTGGTCGTGTTGCAGCAGTTGATCATAATCCTGGAGGAGGTCACTGGTTAGCTGCTGGTCTTTCCCATCAG GTTGGAAGCATTAACAGAGGCCTACCATTTAATAACGCTTTTGCACCAAAGATTCCCTTTTCATATGGAAGCAGCTGTGGCAGCTTCGGTAGCCATGGTAGCTTTAATGACAATGTAGGTCTTGCAAGCAGCTATGGAAGCTATGATGTCAACAGTGTGAACATGTATCATTCACCACTAGGCCCTTCTGGATTCAATTTACATTCACAAGCCGGAGGAACATTTTTGGGATCTAGTCCAGATATTAGACGACGATCTTATCTCTATCATGGTGGTGGCATTCGATTAAGCCCTGGGTGTCCAGGGCCTATGTCTCTTGGGGCAAGTCCATCACAATTTACTCCACCAAATTCTCAGATGCAAATCCCAAGTACTGCTACAGGAAAGTATGGTTCCACTTCTCCTGCAAGGAGCAGTCATGGCTCATTGGGAAAAGCTGCTGCTGTAGGCCAATACAATAGAAGAAGAAATCTTGGTCACCCACCTATATCAATGCCGCCTCATGAATACACATCTCAGCTGACTCAGGGACACCATG GGGATGGCACCATTAGTAATCACTTTGATGGCTATGCTCGTGGACATTCTGGTTACCCACAAAGTGCACTCCCTAATCCTGGTCATTTCAGTTGGAGACCACATACATGCGCTGGCAGTGGTTTATCAACAGACACTTCGAACCATGGGTCCTTTCCACCATCTCGATACGG TGGTTTTCCTCCTACGCACTCATCCAATGTGTCAGCAGATACACTGGCTTCCACCTCATCAATACCGGATCCAGCTGATT GGGATCCAAACTATAGCGAAGAGTCACTTCTGCAAGAGGACACTTCACTATCAGATGCGTTGAGCGATCTCCACCTGAAGGATGCAAGTGGTCAAACAAACCAATCCAGCAGATTGGCCCATATCCAAAGCCATGCTATTGCAAACTCAAACTCTTTATCCATGAATCAAAGAGGTGACCGCCTGTTCCATGCATCAACTC TTACAGAGAGTAGTGCCTCTACAGGCCATGTGACCTATGATGGTTACCATAATGCAAACTA TTCTCAGCTGAA TTTTC AAAGTCGCCATGGACAACCATTTCAGCGGTATAA CCATATGACTGCGAGCTACC TACGTCCAATGGGGAATCATCAC AATGGTCAGCCTGTATGGCCTAATTA TGG CATGGCAGAACCTCCACCTGCTACTATGGCTGACGGAATGCCTTGGGGAGGAAGGCCTGGTCACTCT TTTACAGCAGGCGGACTGCCGTCTTCCTTTGCAGGAAAGGATTTTGGAAGGATTTTCTAGTATGGATCTGGAGGAATGCCATTCAATTGGTTGCATTAGTAGTTTGTATTTGCAACTCTTGGTTGCATTGCTTACGGGCTGTTGATTTTGCAGTTTGTTGCATTCCTCTAATTGATCCCTTCGC AATGCTCCGGCTCATAGAACTGTATGGTATGGGTCTGTAATTGTAGCATTCTCTGTTGGTTTCTTCTTTTCGTTTTTGGTTTATTTGTTATACATCGAGCGGAGGCTTCTGCCTGCTGCAAAAACCCAGCGGGAAAAAGAAGTTGAGCAGCCCCTACTTTCAGAATGCCATGC] [+] EMBL CB643411 [ TAGCATTTGAAATGCTTGGCCATAACCTTTATGAGCTGCTAAAAAGGAATAGTCTAAGAGGTTTGCAACTGAAATATGTCCGAACTTTCTCTAGACAGATATTGGATGCATTGGTTGTCATGAAGGACGCTGGCATTATTCATTGTGATCTAAAACCGGAAAATATTCTCATAACTCCAAATGTAAAAACAGCAGCTGGGGTTAAAGTAATTGATTTTGGATCAGCATGCTTGGAGGGTAAAACCATTTACTCGTATATTCAGAGTCGGTATTACAGATCTCCGGAAGTACTTCTTGGTTACCCATATACCACGGCCATTGATATGTGGTCATTTGGCTGTATAGTCGCTGAACTATATATAGGATTGCCTTTATTTCCTGGAGCGTCAGAATACGATGTCCTATGCCGTATGATTGAGATTCTCGGTGGACAACCACCAGATGATCTGCTACGGGAGGCTAAAAATACTGGGAGATTTTTTAAGCAAGTTGGAAGTATTTATCCTGGTATTGAAATGCAGAATGGCCCTATCAGTGCGTACAGAATATTAACTGAAGAGGAGATTGAAACTAGGGAGTCCAAAAAACCAAAAGTAGGAAGATGGTATTTCCCTCGTGGAAGGCTTGACAAACTCATATATACATACCCTTGGAAGAATTTGAATGGGGAAAACTTGCCAGAGACAGAAAAGACAGATCGCTTAGCACTGGTTGATTTCTTGAGAGGGCTTGTTGAGTTTGATCCTAATAAGCGGTGGTCACCATTGCAGGCTTCATATCATCCC ] [+] EMBL AK104341 [ TTGTTGAGTTTGATCCTAATAAGCGGTGGTCACCATTGCAGGCTTCATATCATCCCTTCATAACTGGTGAAGCGTTTACTGGTCCATATGAGCCTATCCAGGAGACTCCAAGAATTCCTGTTGGTCGTGTTGCAGCAGTTGATCATAATCCTGGAGGAGGTCACTGGTTAGCTGCTGGTCTTTCCCCTCAGGTTGTTGGAAGCATTAACAGAGGCCTACCATTTAATAACGCTTTTGCACCAAAGATTCCCTTTTCATATGGAAGCAGCTGTGGCAGCTTCGGTAGCCATGGTAGCTTTAATGACAATGTAGGTCTTGCAAGCAGCTATGGAAGCTATGATGTCAACAGTGTGAACATGTATCATTCACCACTAGGCCCTTCTGGATTCAATTTACATTCACAAGCCGGAGGAACATTTTTGGGATCTAGTCCAGATATTAGACGACGATCTTATCTCTATCATGGTGGTGGCATTCGATTAAGCCCTGGGTGTCCAGGGCCTATGTCTCTTGGGGCAAGTCCATCACAATTTACTCCACCAAATTCTCAGATGCAAATCCCAAGTACTGCTACAGGAAAGTATGGTTCCACTTCTCCTGCAAGGAGCAGTCATGGCTCATTGGGAAAAGCTGCTGCTGTAGGCCAATACAATAGAAGAAGAAATCTTGGTCACCCACCTATATCAATGCCGCCTCATGAATACACATCTCAGCTGACTCAGGGACACCATG GGGATGGCACCATTAGTAATCACTTTGATGGCTATGCTCGTGGACATTCTGGTTACCCACAAAGTGCACTCCCTAATCCTGGTCATTTCAGTTGGAGACCACATACATGCGCTGGCAGTGGTTTATCAACAGACACTTCGAACCATGGGTCCTTTCCACCATCTCGATACGG TGGTTTTCCTCCTACGCACTCATCCAATGTGTCAGCAGATACACTGGCTTCCACCTCATCAATACCGGATCCAGCTGATT GGGATCCAAACTATAGCGAAGAGTCACTTCTGCAAGAGGACACTTCACTATCAGATGCGTTGAGCGATCTCCACCTGAAGGATGCAAGTGGTCAAACAAACCAATCCAGCAGATTGGCCCATATCCAAAGCCATGCTATTGCAAACTCAAACTCTTTATCCATGAATCAAAGAGGTGACCGCCTGTTCCATGCATCAACTC TTACAGAGAGTAGTGCCTCTACAGGCCATGTGACCTATGATGGTTACCATAATGCAAACTA TTCTCAGCTGAA TTTTC AAAGTCGCCATGGACAACCATTTCAGCGGTATAA CCATATGACTGCGAGCTACC TACGTCCAATGGGGAATCATCAC AATGGTCAGCCTGTATGGCCTAATTA TGG CATGGCAGAACCTCCACCTGCTACTATGGCTGACGGAATGCCTTGGGGAGGAAGGCCTGGTCACTCT TTTACAGCAGGCGGACTGCCGTCTTCCTTTGCAGGAAAGGATTTTGGAAGGATTTTCTAGTATGGATCTGGAGGAATGCCATTCAATTGGTTGCATTAGTAGTTTGTATTTGCAACTCTTGGTTGCATTGCTTACGGGCTGTTGATTTTGCAGTTTGTTGCATTCCTCTAATTGATCCCTTCGC AATGCTCCGGCTCATAGAACTGTATGGTATGGGTCTGTAATTGTAGCATTCTCTGTTGGTTTCTTCTTTTCGTTTTTGGTTTATTTGTTATACATCGAGCGGAGGCTTCTGCCTGCTGCAAAAACCCAGCGGGAAAAAGAAGTTGAGCAGC ] [+] EMBL AK099652 [ GCAGCTGTGGCAGCTTCGGTAGCCATGGTAGCTTTAATGACAATGTAGGTCTTGCAAGCAGCTATGGAAGCTATGATGTCAACAGTGTGAACATGTATCATTCACCACTAGGCCCTTCTGGATTCAATTTACATTCACAAGCCGGAGGAACATTTTTGGGATCTAGTCCAGATATTAGACGACGATCTTATCTCTATCATGGTGGTGGCATTCGATTAAGCCCTGGGTGTCCAGGGCCTATGTCTCTTGGGGCAAGTCCATCACAATTTACTCCACCAAATTCTCAGATGCAAATCCCAAGTACTGCTACAGGAAAGTATGGTTCCACTTCTCCTGCAAGGAGCAGTCATGGCTCATTGGGAAAAGCTGCTGCTGTAGGCCAATACAATAGAAGAAGAAATCTTGGTCACCCACCTATATCAATGCCGCCTCATGAATACACATCTCAGCTGACTCAGGGACACCATG GGGATGGCACCATTAGTAATCACTTTGATGGCTATGCTCGTGGACATTCTGGTTACCCACAAAGTGCACTCCCTAATCCTGGTCATTTCAGTTGGAGACCACATACATGCGCTGGCAGTGGTTTATCAACAGACACTTCGAACCATGGGTCCTTTCCACCATCTCGATACGG TGGTTTTCCTCCTACGCACTCATCCAATGTGTCAGCAGATACACTGGCTTCCACCTCATCAATACCGGATCCAGCTGATT GGGATCCAAACTATAGCGAAGAGTCACTTCTGCAAGAGGACACTTCACTATCAGATGCGTTGAGCGATCTCCACCTGAAGGATGCAAGTGGTCAAACAAACCAATCCAGCAGATTGGCCCATATCCAAAGCCATGCTATTGCAAACTCAAACTCTTTATCCATGAATCAAAGAGGTGACCGCCTGTTCCATGCATCAACTC TTACAGAGAGTAGTGCCTCTACAGGCCATGTGACCTATGATGGTTACCATAATGCAAACTA TTCTCAGCTGAA TTTTC AAAGTCGCCATGGACAACCATTTCAGCGGTATAA CCATATGACTGCGAGCTACC TACGTCCAATGGGGAATCATCAC AATGGTCAGCCTGTATGGCCTAATTA TGG CATGGCAGAACCTCCACCTGCTACTATGGCTGACGGAATGCCTTGGGGAGGAAGGCCTGGTCACTCT TTTACAGCAGGCGGACTGCCGTCTTCCTTTGCAGGAAAGGATTTTGGAAGGATTTTCTAGTATGGATCTGGAGGAATGCCATTCAATTGGTTGCATTAGTAGTTTGTATTTGCAACTCTTGGTTGCATTGCTTACGGGCTGTTGATTTTGCAGTTTGTTGCATTCCTCTAATTGATCCCTTCGC AATGCTCCGGCTCATAGAACTGTATGGTATGGGTCTGTAATTGTAGCATTCTCTGTTGGTTTCTTCTTTTCGTTTTTGGTTTATTTGTTATACATCGAGCGGAGGCTTCTGCCTGCTGCAAAAACCCAGCGGGAAAAAGAAGTTGAGCAGC ] [+] EMBL CF322605 [ TCTCTTGGGGCAAGTCCATCACAATTTACTCCACCAAATTCTCAGATGCAAATCCCAAGTACTGCTACAGGAAAGTATGGTTCCACTTCTCCTGCAAGGAGCAGTCATGGCTCATTGGGAAAAGCTGCTGCTGTAGGCCAATACAATAGAAGAAGAAATCTTGGTCACCCACCTATATCAATGCCGCCTCATGAATACACATCTCAGCTGACTCAGGGACACCATGNGGGATGGCACCATTAGTAATCACTTTGATGGCTATGCTCGTGGACATTCTGGTTACCCACAAAGTGCACTCCCTAATCCTGGTCATTTCAGTTGGAGACCACATACATGCGCTGGCAGTGGTTTATCAACAGACACTTCGAACCATGGGTCCTTTCCACCATCTC ATACGGTTGGTTTTCCTCCTACGCACTCATCCAATGTGTCAGCAGATACACTGGCTTCCACCTCATCAATACCGGATCCAGCTGATTGGGGATCCAAACTATAGCGAAGAGTCACTTCTGCAAGAGGACA ] [+] EMBL BE040551 [ CTCTTGGGGCAAGTCCATCACAATTTACTCCACCAAGTTCTCAGATGCAAATCCCAAGTACTGCTACAGGAAAGTATGGTTCCACTTCTCTTGCAAGGAGCAGTCATGGCTCATTGGGAAAAGCTGCTGCCGTAGGCCAATACAATAGAAGAAGAAATCTTGGTCACCCACCTATATCAATGCCGCCTCATGAATACACATCTCAGCTGATCCAGGGACACCATG GGGATGGCACC ] [+] EMBL AK066790 [ ACCCACCTATATCAATGCCGCCTCATGAATACACATCTCAGCTGACTCAGGGACACCATG GGGATGGCACCATTAGTAATCACTTTGATGGCTATGCTCGTGGACATTCTGGTTACCCACAAAGTGCACTCCCTAATCCTGGTCATTTCAGTTGGAGACCACATACATGCGCTGGCAGTGGTTTATCAACAGACACTTCGAACCATGGGTCCTTTCCACCATCTCGATACGG TGGTTTTCCTCCTACGCACTCATCCAATGTGTCAGCAGATACACTGGCTTCCACCTCATCAATACCGGATCCAGCTGATT GGGATCCAAACTATAGCGAAGAGTCACTTCTGCAAGAGGACACTTCACTATCAGATGCGTTGAGCGATCTCCACCTGAAGGATGCAAGTGGTCAAACAAACCAATCCAGCAGATTGGCCCATATCCAAAGCCATGCTATTGCAAACTCAAACTCTTTATCCATGAATCAAAGAGGTGACCGCCTGTTCCATGCATCAACTC TTACAGAGAGTAGTGCCTCTACAGGCCATGTGACCTATGATGGTTACCATAATGCAAACTA TTCTCAGCTGAA TTTTC AAAGTCGCCATGGACAACCATTTCAGCGGTATAA CCATATGACTGCGAGCTACC TACGTCCAATGGGGAATCATCAC AATGGTCAGCCTGTATGGCCTAATTA TGG CATGGCAGAACCTCCACCTGCTACTATGGCTGACGGAATGCCTTGGGGAGGAAGGCCTGGTCACTCT TTTACAGCAGGCGGACTGCCGTCTTCCTTTGCAGGAAAGGATTTTGGAAGGATTTTCTAGTATGGATCTGGAGGAATGCCATTCAATTGGTTGCATTAGTAGTTTGTATTTGCAACTCTTGGTTGCATTGCTTACGGGCTGTTGATTTTGCAGTTTGTTGCATTCCTCTAATTGATCCCTTCGC AATGCTCCGGCTCATAGAACTGTATGGTATGGGTCTGTAATTGTAGCATTCTCTGTTGGTTTCTTCTTTTCGTTTTTGGTTTATTTGTTATACATCGAGCGGAGGCTTCTGCCTGCTGCAAAAACCCAGCGGGAAAAAGAAGTTGAGCAGC ] [-] EMBL CB643412 [ ACTGGCTTCCACCTCATCAATACCGGATCCAGCTGATT GGGATCCAAACTATAGCGAAGAGTCACTTCTGCAAGAGGACACTTCACTATCAGATGCGTTGAGCGATCTCCACCTGAAGGATGCAAGTGGTCAAACAAACCAATCCAGCAGATTGGCCCATATCCAAAGCCATGCTATTGCAAACTCAAACTCTTTATCCATGAATCAAAGAGGTGACCGCCTGTTCCATGCATCAACTC TTACAGAGAGTAGTGCCTCTACAGGCCATGTGACCTATGATGGTTACCATAATGCAAACTA TTCTCAGCTGAA TTTTC AAAGTCGCCATGGACAACCATTTCAGCGGTATAA CCATATGACTGCGAGCTACC TACGTCCAATGGGGAATCATCAC AATGGTCAGCCTGTATGGCCTAATTA TGG CATGGCAGAACCTCCACCTGCTACTATGGCTGACGGAATGCCTTGGGGAGGAAGGCCTGGTCACTCT TTTACAGCAGGCGGACTGCCGTCTTCCTTTGCAGGAAAGGATTTTGGAAGGATTTTTTAGTATGGATCTGGAGGAATGCCATTCAATTGGTTGCATTAGTAGTTTGTATTTGCAACTCTTGGTTGCATTGCTTACGGGCTGTTGATTTTGCAGTTTGTTGCATTCCTCTAATTGATCCCTTCGC AATGCTCCGGCTCATAGAACTGTATGGTATGGGTCTGTAATTGTAGCATTCTCTGTTGGTTTCTTCTTGTGGTTTTTGGT ] [-] EMBL CB627314 [ GTGGTCAAACAAACCAATCCAGCAGATGGGCCCATATCCAAAGCCATGCTATTGCAAACTCAAACTCTTTATCCATGAATCAAAGAGGTGACCACCTGTTCCATGCATCAACTC TTACAGAGACTAGTGCCTCTACAGGCCATGTGACCTATGATGGTTACCATAATGCAAACTA TTCTCAGCTGAA TTTTC AAAGTCGCCATGGACAACCATTTCAGCGGTATAA CCATATGACTGCCAGCTACC TACGTCCAATGGGGAATCATCAC AATGGTCAGCCTGTATGGCCTAATTA TGG CATGGCAGAACCTCCACCTGCTACTATGGCTGACGGAATGCCTTGGGGAGGAAGGCCTGGTCACTCT TTTACAGCAGGCGGACTGCCGTCTTCCTTTGCAGGAAAGGATTTTGGAAGGATTTTCTAGTATGGATCTGGAGGAATGCCATTCAATTGGTTGCATTAGTAGTTTGTATTTGCAACTCTTGGTTGCATTGCTTACGGGCTGTTGATTTTGCAGTTTGTTGCATTCCTCTAATTGATCCCTTCGC AATGCTCCGGCTCATAGAACTGTATGGTATGGGTCTGTAATTGTAGCATTCTCTGTTGGTTTCTTCTTTTCGTTTTTGGTTTATTTGTTATACATCGAGCGGAGGCTTCTGCCTGCTGCAAAAGCCCAGCGGGAAAAAGAAGTTGAGCAGCCCCT ] [+] EMBL D43013 [ GCAGATTGGTNCATATCCAAAGCCATGCTATTGCAAACTCAAACTCTTTATCCATGAATCAAAGAGGTGACCGCCTGTTCCATGCATCAACTCTTTACAGNGAGTAGTGCCTCTACAGGCCATGTGACCTNTGATGGTTACCATAATGCAAACTATTTCTCAGCTGAATTTTTCAAAAGTCGCCATGGACAACCATTTCAGCGGTATAACCCATATGNCTGCGAGCTACCTTACGTNCAATGGGGAATCATCACAAATGGTCAGNCTGTATGGGCTAATTATTGGNAATGGCAGANCCTCCACCTGCTACTATGGCTGACGGga ] [+] EMBL BI812732 [ CATATGACT CCAGCTACC TACGTCCAAT GGGAATCATCAC AATGGTCAGCCTGTATGGCCTAATTA TGG CAT GCAGAACCTCCACCTGCTACTAT GCTGACGGAAT CCTTGGGGAGGAA GCCTGGTCACTCTGTTTACAGCA GCGGACTGCCGTCTTCCTTT CAGGAAAGGATTTTGGAAGGATTTTCTAGTATGGATCTGGAGGAAT CCATTCAATTGGTTGCATTAGTAGTTTGTATTTGCAACTCTTGGTTGCATTGCTTACGGGCTGTTGATTTT CAGTTTGTTGCATTCCTCTAATTGATCCCTTCGCAAATGCTCCGGCTCATAGAACTGTATGGTATGGGTCTGTAATTGTAGCATTCTCTGTTGGTTTCTTCTTTTCGTTTTTGGTTTATTTGTTATACATCGAGCGGAGGCTTCTGCCTGCTGCAAAAACCCAGCGGGAAAAAGAAGTTGAGCAGCCCCTACTTTCAAAAaaaaaa ] consensusID : consensus_13687#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 421 fasta sequence [CATCACAATGGTCAGCCTGTATGGCCTAATTATGGCATGGCAGAACCTCCACCTGCTACTTTGGCTGACGGAATGCCTTGGGGAGGAAGGCCTGGTCACTCTTTTACAGCAGGGGGACTGCCGTCTTCCTTTGCAGGAAAGGATTTTGGAAGGATTTTCTAGTATGGATCTGGAGGAATGCCATTCAATTGGTTGCATTAGTAGTGTGTATTTGCAACTCTTGGTTGCATTGATTACGGGCTGTTGATTTTGCAGTTTGTTGCATTCCTGTAATTGATCCTTTCGCAATGCTCCGGCTCATAGAACTGTATGGTATGGGTCTGTAATTGTAGCATTGTGGTGTTGGTTTGTTCTTTTCGTTTTTGGTTTATTTGTTATACATCGAGTGGGGAGTCCAAAATCAATTACTTTAACGCCCAGC] [-] EMBL CB627313 [CATCACAATGGTCAGCCTGTATGGCCTAATTATGGCATGGCAGAACCTCCACCTGCTACTTTGGCTGACGGAATGCCTTGGGGAGGAAGGCCTGGTCACTCTTTTACAGCAGGGGGACTGCCGTCTTCCTTTGCAGGAAAGGATTTTGGAAGGATTTTCTAGTATGGATCTGGAGGAATGCCATTCAATTGGTTGCATTAGTAGTGTGTATTTGCAACTCTTGGTTGCATTGATTACGGGCTGTTGATTTTGCAGTTTGTTGCATTCCTGTAATTGATCCTTTCGCAATGCTCCGGCTCATAGAACTGTATGGTATGGGTCTGTAATTGTAGCATTGTGGTGTTGGTTTGTTCTTTTCGTTTTTGGTTTATTTGTTATACATCGAGTGGGGAGTCCAAAATCAATTACTTTAACGCCCAGC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_13687#0 GAGCCACGTGGATTGGGCTGAGGTGGTGGTGGTGGGCATTTGATCTCCGCGGGGGCGGCG 60 consensus_13687#1 ------------------------------------------------------------ consensus_13687#0 GCGATTGGGTGCTGGGAGGCGGTTGCGCGTGTGGTGTATGGAGGTTTCCTGGGAGGTGGA 120 consensus_13687#1 ------------------------------------------------------------ consensus_13687#0 CGCGGCGGGGCCGCCGTGGAGGCCGAGTGAGTCCACGGCGTTCCTTCCGTTCGCTTCTGC 180 consensus_13687#1 ------------------------------------------------------------ consensus_13687#0 TGCGGCGGCCGGGGACCGGGCGGGGGCGTCGTTGTCCGGTCGACGCAATGGGCTTGCCGC 240 consensus_13687#1 ------------------------------------------------------------ consensus_13687#0 CCGCTCAAGCAACCTCAGCTCCGTCAGGAAGAGGCCTTTTGTTGCAAGATTAACCACAGA 300 consensus_13687#1 ------------------------------------------------------------ consensus_13687#0 CATTGTCCAAACTTTCGGAAAATGCAATCCTGAGTTTAAGTACTCAGATTCACTGAACCC 360 consensus_13687#1 ------------------------------------------------------------ consensus_13687#0 CAAGCGCTTTCTCACCAACCCTTCAGTTCCAGCTCACAATGATGGCCTTGATAATGCAAA 420 consensus_13687#1 ------------------------------------------------------------ consensus_13687#0 TTCTGACCTCATCTTGTATGTCAACTTGGAATTGGTTAATAAAAAGTCGGACCGGAGGTA 480 consensus_13687#1 ------------------------------------------------------------ consensus_13687#0 CGTTATTAAAGAAATGCTTGGCCAAGGTACGTTTGGACAGGTTGCTAAATGCTGGGATGG 540 consensus_13687#1 ------------------------------------------------------------ consensus_13687#0 AGAAACTAACAGCTATGTTGCAGTAAAGGTTATAAAAAATCAGCCTGCCTTTTATCAGCA 600 consensus_13687#1 ------------------------------------------------------------ consensus_13687#0 AGCTATCATGGAGGTCTCACTGTTGAGCATGCTGAATGAGAAATATGATCCTGATGATCA 660 consensus_13687#1 ------------------------------------------------------------ consensus_13687#0 ACACCACATTGTCCGGATGCTGGATTTTTTTCTCTACCAAAATCATTTGTGTATAGCATT 720 consensus_13687#1 ------------------------------------------------------------ consensus_13687#0 TGAAATGCTTGGCCATAACCTTTATGAGCTGCTAAAAAGGAATAGTCTAAGAGGTTTGCA 780 consensus_13687#1 ------------------------------------------------------------ consensus_13687#0 ACTGAAATATGTCCGAACTTTCTCTAGACAGATATTGGATGCATTGGTTGTCATGAAGGA 840 consensus_13687#1 ------------------------------------------------------------ consensus_13687#0 CGCTGGCATTATTCATTGTGATCTAAAACCGGAAAATATTCTCATAACTCCAAATGTAAA 900 consensus_13687#1 ------------------------------------------------------------ consensus_13687#0 AACAGCAGCTGGGGTTAAAGTAATTGATTTTGGATCAGCATGCTTGGAGGGTAAAACCAT 960 consensus_13687#1 ------------------------------------------------------------ consensus_13687#0 TTACTCGTATATTCAGAGTCGGTATTACAGATCTCCGGAAGTACTTCTTGGTTACCCATA 1020 consensus_13687#1 ------------------------------------------------------------ consensus_13687#0 TACCACGGCCATTGATATGTGGTCATTTGGCTGTATAGTCGCTGAACTATATATAGGATT 1080 consensus_13687#1 ------------------------------------------------------------ consensus_13687#0 GCTTTTATTTCCTGGAGCGTCAGAATACGATGTCCTATGCCGTATGATTGAGATTCTCGG 1140 consensus_13687#1 ------------------------------------------------------------ consensus_13687#0 TGGACAACCACCAGATGATCTGCTACGGGAGGCTAAAAATACTGGGAGATTTTTTAAGCA 1200 consensus_13687#1 ------------------------------------------------------------ consensus_13687#0 AGTTGGAAGTATTTATCCTGGTATTGAAATGCAGAATGGCCCTATCAGTGCGTACAGAAT 1260 consensus_13687#1 ------------------------------------------------------------ consensus_13687#0 ATTAACTGAAGAGGAGATTGAAACTAGGGAGTCCAAAAAACCAAAAGTAGGAAGATGGTA 1320 consensus_13687#1 ------------------------------------------------------------ consensus_13687#0 TTTCCCTCGTGGAAGGCTTGACAAACTCATATATACATACCCTTGGAAGAATTTGAATGG 1380 consensus_13687#1 ------------------------------------------------------------ consensus_13687#0 GGAAAACTTGCCAGAGACAGAAAAGACAGATCGCTTAGCACTGGTTGATTTCTTGAGAGG 1440 consensus_13687#1 ------------------------------------------------------------ consensus_13687#0 GCTTGTTGAGTTTGATCCTAATAAGCGGTGGTCACCATTGCAGGCTTCATATCATCCCTT 1500 consensus_13687#1 ------------------------------------------------------------ consensus_13687#0 CATAACTGGTGAAGCGTTTACTGGTCCATATGAGCCTATCCAGGAGACTCCAAGAATTCC 1560 consensus_13687#1 ------------------------------------------------------------ consensus_13687#0 TGTTGGTCGTGTTGCAGCAGTTGATCATAATCCTGGAGGAGGTCACTGGTTAGCTGCTGG 1620 consensus_13687#1 ------------------------------------------------------------ consensus_13687#0 TCTTTCCCATCAGGTTGGAAGCATTAACAGAGGCCTACCATTTAATAACGCTTTTGCACC 1680 consensus_13687#1 ------------------------------------------------------------ consensus_13687#0 AAAGATTCCCTTTTCATATGGAAGCAGCTGTGGCAGCTTCGGTAGCCATGGTAGCTTTAA 1740 consensus_13687#1 ------------------------------------------------------------ consensus_13687#0 TGACAATGTAGGTCTTGCAAGCAGCTATGGAAGCTATGATGTCAACAGTGTGAACATGTA 1800 consensus_13687#1 ------------------------------------------------------------ consensus_13687#0 TCATTCACCACTAGGCCCTTCTGGATTCAATTTACATTCACAAGCCGGAGGAACATTTTT 1860 consensus_13687#1 ------------------------------------------------------------ consensus_13687#0 GGGATCTAGTCCAGATATTAGACGACGATCTTATCTCTATCATGGTGGTGGCATTCGATT 1920 consensus_13687#1 ------------------------------------------------------------ consensus_13687#0 AAGCCCTGGGTGTCCAGGGCCTATGTCTCTTGGGGCAAGTCCATCACAATTTACTCCACC 1980 consensus_13687#1 ------------------------------------------------------------ consensus_13687#0 AAATTCTCAGATGCAAATCCCAAGTACTGCTACAGGAAAGTATGGTTCCACTTCTCCTGC 2040 consensus_13687#1 ------------------------------------------------------------ consensus_13687#0 AAGGAGCAGTCATGGCTCATTGGGAAAAGCTGCTGCTGTAGGCCAATACAATAGAAGAAG 2100 consensus_13687#1 ------------------------------------------------------------ consensus_13687#0 AAATCTTGGTCACCCACCTATATCAATGCCGCCTCATGAATACACATCTCAGCTGACTCA 2160 consensus_13687#1 ------------------------------------------------------------ consensus_13687#0 GGGACACCATGGGGATGGCACCATTAGTAATCACTTTGATGGCTATGCTCGTGGACATTC 2220 consensus_13687#1 ------------------------------------------------------------ consensus_13687#0 TGGTTACCCACAAAGTGCACTCCCTAATCCTGGTCATTTCAGTTGGAGACCACATACATG 2280 consensus_13687#1 ------------------------------------------------------------ consensus_13687#0 CGCTGGCAGTGGTTTATCAACAGACACTTCGAACCATGGGTCCTTTCCACCATCTCGATA 2340 consensus_13687#1 ------------------------------------------------------------ consensus_13687#0 CGGTGGTTTTCCTCCTACGCACTCATCCAATGTGTCAGCAGATACACTGGCTTCCACCTC 2400 consensus_13687#1 ------------------------------------------------------------ consensus_13687#0 ATCAATACCGGATCCAGCTGATTGGGATCCAAACTATAGCGAAGAGTCACTTCTGCAAGA 2460 consensus_13687#1 ------------------------------------------------------------ consensus_13687#0 GGACACTTCACTATCAGATGCGTTGAGCGATCTCCACCTGAAGGATGCAAGTGGTCAAAC 2520 consensus_13687#1 ------------------------------------------------------------ consensus_13687#0 AAACCAATCCAGCAGATTGGCCCATATCCAAAGCCATGCTATTGCAAACTCAAACTCTTT 2580 consensus_13687#1 ------------------------------------------------------------ consensus_13687#0 ATCCATGAATCAAAGAGGTGACCGCCTGTTCCATGCATCAACTCTTACAGAGAGTAGTGC 2640 consensus_13687#1 ------------------------------------------------------------ consensus_13687#0 CTCTACAGGCCATGTGACCTATGATGGTTACCATAATGCAAACTATTCTCAGCTGAATTT 2700 consensus_13687#1 ------------------------------------------------------------ consensus_13687#0 TCAAAGTCGCCATGGACAACCATTTCAGCGGTATAACCATATGACTGCGAGCTACCTACG 2760 consensus_13687#1 ------------------------------------------------------------ consensus_13687#0 TCCAATGGGGAATCATCACAATGGTCAGCCTGTATGGCCTAATTATGGCATGGCAGAACC 2820 consensus_13687#1 -------------CATCACAATGGTCAGCCTGTATGGCCTAATTATGGCATGGCAGAACC 47 *********************************************** consensus_13687#0 TCCACCTGCTACTATGGCTGACGGAATGCCTTGGGGAGGAAGGCCTGGTCACTCTTTTAC 2880 consensus_13687#1 TCCACCTGCTACTTTGGCTGACGGAATGCCTTGGGGAGGAAGGCCTGGTCACTCTTTTAC 107 ************* ********************************************** consensus_13687#0 AGCAGGCGGACTGCCGTCTTCCTTTGCAGGAAAGGATTTTGGAAGGATTTTCTAGTATGG 2940 consensus_13687#1 AGCAGGGGGACTGCCGTCTTCCTTTGCAGGAAAGGATTTTGGAAGGATTTTCTAGTATGG 167 ****** ***************************************************** consensus_13687#0 ATCTGGAGGAATGCCATTCAATTGGTTGCATTAGTAGTTTGTATTTGCAACTCTTGGTTG 3000 consensus_13687#1 ATCTGGAGGAATGCCATTCAATTGGTTGCATTAGTAGTGTGTATTTGCAACTCTTGGTTG 227 ************************************** ********************* consensus_13687#0 CATTGCTTACGGGCTGTTGATTTTGCAGTTTGTTGCATTCCTCTAATTGATCCCTTCGCA 3060 consensus_13687#1 CATTGATTACGGGCTGTTGATTTTGCAGTTTGTTGCATTCCTGTAATTGATCCTTTCGCA 287 ***** ************************************ ********** ****** consensus_13687#0 ATGCTCCGGCTCATAGAACTGTATGGTATGGGTCTGTAATTGTAGCATTCTC-TGTTGGT 3119 consensus_13687#1 ATGCTCCGGCTCATAGAACTGTATGGTATGGGTCTGTAATTGTAGCATTGTGGTGTTGGT 347 ************************************************* * ******* consensus_13687#0 TTCTTCTTTTCGTTTTTGGTTTATTTGTTATACATCGAGCGGAGGCTTCTG--CCTGCTG 3177 consensus_13687#1 TTGTTCTTTTCGTTTTTGGTTTATTTGTTATACATCGAGTGGGGAGTCCAAAATCAATTA 407 ** ************************************ ** * * * * * consensus_13687#0 CA--AAAACCCAGCGGGAAAAAGAAGTTGAGCAGCCCCTACTTTCAGAATGCCATGC 3232 consensus_13687#1 CTTTAACGCCCAGC------------------------------------------- 421 * ** ****** |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||