cluster # 13697

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Oryza sativa
cluster # 13697 cluster # 13697 Sequences # 13 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_13697#0 length = 1005 sequences # 10
consensus_13697#1 length = 980 sequences # 1

consensus_13697#2 length = 358 sequences # 1
consensus_13697#3 length = 290 sequences # 1

consensusID : consensus_13697#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 1005
fasta sequence

                              [GGCAACGAGATACGGCACCAATACCAATCTCTGACTCCTCCGGCCTCCGGCGGCCGGCGAGAGAGATCCCACCCTCACCGACGACGGCGAGCGACCACCATGTCCTCCTCCACCTTCAGCGGCGATGAGACCGCCCCTTTCTTCGGCTTCCTCGGCGCCGCCTCCGCCCTCGTATTCTCCTGCATGGGCGCCGCCTACGGCACCGCCAAGAGCGGCGTGGGCGTGGCGTCCATGGGGGTGATGCGCCCGGAACTGGTGATGAAGTCCATCGTCCCCGTCGTCATGGCCGGAGTGCTCGGTATCTACGGCCTCATCATCGCCGTCATCATCTCCACCGGCATCAACCCCAAGGCCAAGCCCTACTTCCTCTTCGACGGTTACGCCCACCTCTCCTCCGGTCTCGCCTGCGGCCTCGCCGGTCTCGCCGCCGGCATGGCCATC-GGCATCGTCGGCGACGCCGGAGTCAGGGCCAATGCGCAGCAGCCAAAGTTGTTCGTGGGCATGATCCTCATCCTTATCTTTGCAGAAGCTCTTGCTCTGTATGGCCTGATTGTTGGTATCATCCTCTCGTCTCGTGCGG-GCCAATCTCGAGCGGATTAGAGGGTTTTGGAAGAACAAGAC-ACGGTTCACCA-TTGTATTCTATTCCAAG-TGTTAATTTCTTCTTATAGACTGCTTGGTCTTGTCTGTGTTTATACTCATTGTCTGTATTCAAGCTATTGTGGGTTGTTGTATTTATTATTTGAATTTTTGAAGTAATAATCGGTACCAGGCCGTCCGAGATGTGATTAATAATGAATGAATAAATAAATAAGCAAACAAACAAGCTAGACTTA-----AAAAAAAAAAAAACCGAGGGGGGGCCGGTCCCATCCCCTATGGGGCGTTTACGGCGCTATGGCCCGGTACCACTGGGCTGGAAACCTGCGTACCATTAATGCTGAGCATTCCTTTGCAGTGCGATAGAAAGGCGCCTTCCTTCAAGTGCACCTAGGAAGGACGCTTTGGATT]

[+] EMBL CA755414             [GGCAACGAGATACGGCACCAATACCAATCTCTGACTCCTCCGGCCTCCGGCGGCCGGCGAGAGAGATCCCACCCTCACCGACGACGGCGAGCGACCACCATGTCCTCCTCCACCTTCAGCGGCGATGAGACCGCCCCTTTCTTCGGCTTCCTCGGCGCCGCCTCCGCCCTCGTATTCTCCTGCATGGGCGCCGCCTACGGCACCGCCNAGAGCGGCGTGGGCGTGGCGTCCATGGGGGTGATGCGCCCGGAACTGGTGATGAAGTCCATCGTCCCCGTCGTCATGGCCGGAGTGCTCGGTATCTACGGCCTCATCATCGCCGTCATCATCTCCACCGGCATCAACCCCAAGGCCAAGGCCTACTTCCTCTTCGACGGTTACGCCCACCTCTCCTCCGGTCTCGCCTGCGGCCTCGCCGGTCTCGCCGCCGGCATGGCCATC GGCATCGTCGGCGACGCCGGAGTCAGGGCCAATGCGCAGCAGCCAAAGTTGTTCGTGGGCATGATCCTCATCCTTATCTTTGCAGAAGCTCTTGCTCTGTATGGCCTGATTGGTGGTATCATCCTCTCGTCTCGTGCGGNGGC ATCTCGAGCGGATTAGA GGTTTTGGAAGAc                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BE040971             [       AGATACGGCACCAATACCAATCTCTGACTCCTCCGGGCTCCGGCGGCCGGCGAGAGAGATCCCACCCTCAC   CGACGGCGAGCGACCACCATGTCCTCCTCCACCTTCAGCGGCGATGAGACCGCCCCTTTCTTCGGCTTCCTCGGCGCCGCCTCCGCCCTCGTATTCTCCTGCATGGGCGCCGCCTACGGCACCGCCAAGAGCGGCGTGGGCGTGGCGTCCATGGGGGTGATGCGCCCGGAACTGGTGATGAAGTCCATCGTCCCCGTCGTCATGGCCGGAGTGCTCGGTATCTACGGCCTCATCATCGCCGTCATCATCTCCACCGGCATCAACCCCAAGGCCAAGCCCTACTTCCTCTTCGACGGTTACGCCCACCTCTCCTCCGGTCTCGCCTGCGGCCTCGCCGGTCTCGCCGCCGGCATGGCCATC GGCATCGTCGGCGACGCCGGAGTCAGGGCCAATGCGCAGCAGCCAAAGTTGTTCGTGGGCATGATCCTCATCCTTATCTTTGCAGAAGCTCTTGCTCTGTATGGCCTGATTGTTGGTATCATCCTCTCGTCTCGTGCGG GCCAATCTCGAGCGGATTAGAGGGTTTTGGAAGAACAAGAC ACGGTTCACCA TTGTATTCTATTCCAAG TGGTAATTTCTTCTTATAGACTGCTTGGTCTTGTCTGTGTTTATACTCATTGGCTGTATTCAAGCTATTGGGGGTTGGTGGA TTATTATTTGAA TTTTGAAG AATAATCGG ACCAGGCCG CCGAGATG GGTTAAT ATG ATGGAT AAT AATAAGC AAC AACAAG TTGACTTA     AAAAAAAAAAAAACCGAGGGGGGGCCGGTCCCATCCCCTATGGGGCGTTTACGGCGCTATGGCCCGGTACCACTGGGCTGGAAACCTGCGTACCATTAATGCTGAGCATTCCTTTGCAGTGCGATAGAAAGGCGCCTTCCTTCAAGTGCACCTAGGAAGGACGCTTTGGATT]
[+] EMBL AK063178             [        GATACGGCACCAATACCAATCTCTGACTCCTCCGGCCTCCGGCGGCCGGCGAGAGAGATCCCACCCTCACCGACGACGGCGAGCGACCACCATGTCCTCCTCCACCTTCAGCGGCGATGAGACCGCCCCTTTCTTCGGCTTCCTCGGCGCCGCCTCCGCCCTCGTATTCTCCTGCATGGGCGCCGCCTACGGCACCGCCAAGAGCGGCGTGGGCGTGGCGTCCATGGGGGTGATGCGCCCGGAACTGGTGATGAAGTCCATCGTCCCCGTCGTCATGGCCGGAGTGCTCGGTATCTACGGCCTCATCATCGCCGTCATCATCTCCACCGGCATCAACCCCAAGGCCAAGCCCTACTTCCTCTTCGACGGTTACGCCCACCTCTCCTCCGGTCTCGCCTGCGGCCTCGCCGGTCTCGCCGCCGGCATGGCCATC GGCATCGTCGGCGACGCCGGAGTCAGGGCCAATGCGCAGCAGCCAAAGTTGTTCGTGGGCATGATCCTCATCCTTATCTTTGCAGAAGCTCTTGCTCTGTATGGCCTGATTGTTGGTATCATCCTCTCGTCTCGTGCGG GCCAATCTCGAGCGGATTAGAGGGTTTTGGAAGAACAAGAC ACGGTTCACCA TTGTATTCTATTCCAAG TGTTAATTTCTTCTTATAGACTGCTTGGTCTTGTCTGTGTTTATACTCATTGTCTGTATTCAAGCTATTGTGGGTTGTTGTATTTATTATTTGAATTTTTGAAGTAATAATCGGTACCAGGCCGTCCGAGATGTGATTAATAATGAATGAATAAATAAATAAGCAAACAAACAAGCTAGACTTA     gttttaagt                                                                                                                                                                   ]
[+] EMBL CF291458             [           ACGGCACCAATACCAATCTCTGACTCCTCCGGCCTCCGGCGGCCGGCGAGAGAGATCCCACCCTCACCGACGACGGCGAGCGACCACCATGTCCTCCTCCACCTTCAGCGGCGATGAGACCGCCCCTTTCTTCGGCTTCCTCGGCGCCGCTTCCGCCCTCGTATTCTCCTGCATGGGCGCCGCCTACGGCACCGCCAAGAGCGGCGTGGGCGTGGCGTCCATGGGGGTGATGCGCCCGGAACTGGTGATGAAGTCCATCGTCCCCGTCGTCATGGCCGGAGTGCTCGGTATCTACGGCCTCATCATCGCCGTCATCATCTCCACCGGCATCAACCCCAAGGCCAAGCCCTACTTCCTCTTCGACGGTTACGCCCACCTCTCCTCCGGTCTCGCCTGCGGCCTCGCCGGTCTCGCCGCCGGCATGGCCATC GGCATCGTCGGCGACGCCGGAGTCAGGGCCAATGTGCAGCAGCCAAAGTTGTTCGTGGGCATGATCCTCATCCTTATCTTTGCAGAAGCTCTTGCTCTGTATGGCCTGATTGTTGGTATCATCCTCTCGTCTCGTGCGG GCCAATCTCGAGCGGATTAGAGGGTTTTGGAAGAACAAGAC ACGGTTCACCA TTGTATTCTATTCCAAG CGTTAATTTCTTCTTATAGACT                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CA753382             [                ACCAATACCAATCTCTGACTCCTCCGGCCTCCGGCGGCCGGCGAGAGAGATCCCACCCTCACCGACGACGGCGAGCGACCACCATGTCCTCCTCCACCTTCAGCGGCGATGAGACCGCCCCTTTCTTCGGCTTCCTCGGCGCCGCCTCCGCCCTCGTATTCTCCTGCATGGGCGCCGCCTACGGCACCGCCAAGAGCGGCGTGGGCGTGGCGTCCATGGGGGTGATGCGCCCGGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CF281098             [                                          GCCTCCGGCGGCCGGCGAGAGAGATCCCACCCTCACCGACGACGGCGAGCGACCACCATGTCCTCCTCCACCTTCAGCGGCGATGAGACCGCCCCTTTCTTCGGCTTCCTCGGCGCCGTTTTTTTCCTCGTATTCTCCTGCATGGGCGCCGCCTACGGCACCGTTTTTTATGGCGTGGGCGTGGCGTCCATGGGGGTGATGCGCCCGGAACTGGTGATGAAGTCCATCGTCCCCGTCGTCATGGCCGGAGTGCTCGGTATCTACGGCCTCATCATCGCCGTCATCATCTCCACCGGCATCAACCCCAAGGCCAAGCCCTACTTCCTCTTCGACGGTTACGCCCACCTCTCCTCCGGTCTCGCCTGCGGCCTCGCCGGTCTCGCCGCCGGCATGGCCATC GGCATCGTCGGCGACGCCGGAGTCAGGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CB682307             [                                                                                    CGGCGAGCGACCACCATGTCCTCCTCCACCTTCAGCGGCGATGAGACCGCCCCTTTCTTCGGCTTCCTCGGCGCCGCCTCCGCCCTCGGATTCTCCTGCATGGGCGCCGCCTACGGCACCGCCAAGAGCGGCGGGGGCGTGGCGTCCATGGGGGTGATGCGCCCGGAACTGGTGATGAAGTCCATCGTCCCCGTCGTCATGGCCGGAGTGCTCGGTATCTACGGCCTCATCATCGCCGTCATCATCTCCACCGGCATCAACCCCAAGGCCAAGCCCTACTTCCTCTTCGACGGTTACGCCCACCTCTCCTCCGGTCTCGCCTGCGGCCTCGCCGGTCTCGCCGCCGGCATGGCCATC GGCATCGTCGGCGACGCCGGAGTCAGGGCCAATGCGCAGCAGCCAAAGTTGTTCGTGGGCATGATCCTCATCCTTATCTTTGCAGAAGCTCTTGCTCTGTATGGCCTGATTGTTGGTATCATCCTCTCGTCTCGTGCGG GCCAATCTCGAGCGGATTATAGGGTTTTGGAAGAACAAGAC ACGGTTCACCA TTGTATTCTATTCCAAG AGTTAATTTCTTCTTATAGACTGCTTGGTCTTGTCTGTGTTTATACTCATTGTCTGTATTCAAGCTATTGTGGGCTGTTGCATTTATTATTTGAATTGTTGA                                                                                                                                                                                                                                                                   ]
[+] EMBL CB000730             [                                                                                                                                                                                                                                                                                  CCGTCGTCATGGCCGGAGTGCTCGGTATCTACGGCCTCATCATCGCCGTCATCATCTCCACCGGCATCAACCCCAAGGCCAAGCCCTACTTCCTCTTCGACGGTTACGCCCACCTCTCCTCCGGTCTCGCCTGCGGCCTCGCCGGTCTCGCCGCCGGCATGGCCATC GGCATCGTCGGCGACGCCGGAGTCAGGGCCAATGCGCAGCAGCCAAAGTTGTTCGTGGGCATGATCCTCATCCTTATCTTTGCAGAAGCTCTTGCTCTGTATGGCCTGATTGTTGGTATCATCCTCTCGTCTCGTGCGG GCCAATCTCGAGCGGATTAGAGGGTTTTGGAAGAACAAGAC ACGGTTCACCA TTGTATTCTATTCCAAG TGTTAATTTCTTCTTATAGACTGCT                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CF291457             [                                                                                                                                                                                                                                                                                                                                                                                                                           CTCGCCGGTCTCGCCGCCGGCATGGCCATCGGGCATCGTCGGCGACGCCGGAGTCAGGGCCAATGTGCAGCAGCCAAAGTTGTTCGTGGGCATGATCCTCATCCTTATCTTTGCAGAAGCTCTTGCTCTGTATGGCCTGATTGTTGGTATCATCCTCTCGTCTCGTGCGG GCCAATCTCGAGCGGATTAGAGGGTTTTGGAAGAACAAGACAACGGTTCACCACTTGTATTCTATTCCAAGACGTTAATTTCTTCTTATAGACTGCTTGGTCTTGTCTGTGTTTATACTCATTGTCTGTATTCAAGCTATTGTGGGTTGTTGTATTTATTATTTGAATTTTTGAAGTAATAATCGGTACCAGGCCGTCCGAGATGTGATTAAAAAaaaa                                                                                                                                                                                                                      ]
[-] EMBL CF281097             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CGCAGCAGCCAAAGTTGTTCGTGGGCATGATCCTCATCCTTATCTTTGCAGAAGCTCTTGCTCTGTATGGCCTGATTGTTGGTATCATCCTCTCGTCTCGTGCGG GCCAATCTCGAGCGGATTAGAGGGTTTTGGAAGAACAAGAC ACGGTTCACCA TTGTATTCTATTCCAAG TGTTAATTTCTTCTTATAGACTGCTTGGTCTTGTCTGTGTTTATACTCATTGTCTGTATTCAAGCTATTGTGGGTTGTTGTATTTATTATTTGAATTTTTGAAGTAATAATCGGTACCAGGCCGTCCGAGATGTGATTAATAATGAATGAATAAATAAATAAGCAAACAAACAAGCTAGACTTAGTTTTAAAAAAAAA                                                                                                                                                                   ]




>consensus_13697#0
GGCAACGAGATACGGCACCAATACCAATCTCTGACTCCTCCGGCCTCCGGCGGCCGGCGA
GAGAGATCCCACCCTCACCGACGACGGCGAGCGACCACCATGTCCTCCTCCACCTTCAGC
GGCGATGAGACCGCCCCTTTCTTCGGCTTCCTCGGCGCCGCCTCCGCCCTCGTATTCTCC
TGCATGGGCGCCGCCTACGGCACCGCCAAGAGCGGCGTGGGCGTGGCGTCCATGGGGGTG
ATGCGCCCGGAACTGGTGATGAAGTCCATCGTCCCCGTCGTCATGGCCGGAGTGCTCGGT
ATCTACGGCCTCATCATCGCCGTCATCATCTCCACCGGCATCAACCCCAAGGCCAAGCCC
TACTTCCTCTTCGACGGTTACGCCCACCTCTCCTCCGGTCTCGCCTGCGGCCTCGCCGGT
CTCGCCGCCGGCATGGCCATCGGCATCGTCGGCGACGCCGGAGTCAGGGCCAATGCGCAG
CAGCCAAAGTTGTTCGTGGGCATGATCCTCATCCTTATCTTTGCAGAAGCTCTTGCTCTG
TATGGCCTGATTGTTGGTATCATCCTCTCGTCTCGTGCGGGCCAATCTCGAGCGGATTAG
AGGGTTTTGGAAGAACAAGACACGGTTCACCATTGTATTCTATTCCAAGTGTTAATTTCT
TCTTATAGACTGCTTGGTCTTGTCTGTGTTTATACTCATTGTCTGTATTCAAGCTATTGT
GGGTTGTTGTATTTATTATTTGAATTTTTGAAGTAATAATCGGTACCAGGCCGTCCGAGA
TGTGATTAATAATGAATGAATAAATAAATAAGCAAACAAACAAGCTAGACTTAAAAAAAA
AAAAAACCGAGGGGGGGCCGGTCCCATCCCCTATGGGGCGTTTACGGCGCTATGGCCCGG
TACCACTGGGCTGGAAACCTGCGTACCATTAATGCTGAGCATTCCTTTGCAGTGCGATAG
AAAGGCGCCTTCCTTCAAGTGCACCTAGGAAGGACGCTTTGGATT

consensusID : consensus_13697#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 980
fasta sequence

                              [TATTCTCCTGCATGGGCGCCGCCTACGGCACCGCCAAGAGCGGCGTGGGCGTGGCGTCCATGGGGGTGATGCGCCCGGAACTGGTGATGAAGTCCATCGTCCCCGTCGTCATGGCCGGAGTGCTCGGTATCTACGGCCTCATCATCGCCGTCATCATCTCCACCGGCATCAACCCCAAGGCCAAGCCCTACTTCCTCTTCGACGGTTACGCCCACCTCTCCTCCGGTCTCGCCTGCGGCCTCGCCGGTCTCGCCGCCGGCATGGCCATCGGCATCGTCGGCGACGCCGGAGTCAGGGCCAATGCGCAGCAGCCAAAGTTGTTCGTGGGCATGATCCTCATCCTTATCTTTGCAGAAGATCTTGCTCTGTATGGCCTGATTGTTGGTATCATCCTCTCGTCTCGTGCGGGCCAATCTCGAGCGGATTAGAGGGTTTTGGAAGAACAAGACACGGTTCACCATTGTATTCTATTCCAAGTGTTAATTTCTTCTTATAGACTGCTTGGTCTTGTCTGTGTTTATACTCATTGTCTGTATTCAAGCTATTGTGGGTTGTTGTATTTATTATTTGAATTTTTGAAGTAATAATCGGTACCAGGCCGTCCGAGATGTGATAATAATGAATTGATAATTAATAGGCAACCAACAGCTAGACTTACTTTTAAAAAAATAAGNNAGAGAATTATAAAATACCTTGAGGGGGGCCCGGTCCAATTCGCCCTTAGTGAGTGGTTTACCCCGCTCATGGCCGGCTTTTACACGTCGGACTGGGAACCCTGGGTACCCAATTAATGCCTTGAGAAATCCCTTTGCAGTTGGCTAATACAAAAGGCCCACCAACTCCTTCCAAATTGCCAATTATTGGAATGGACCCCCTGACGGGCCTAAGCGGGGGTGGGGGTACCCGGTGACTTAACTTCAACCTTCCCCTTTTGGTTTCCTTTTTTACATTACCGTTCCGTAGTTAATGGCCCTAGGCCA]

[+] EMBL BE040702             [TATTCTCCTGCATGGGCGCCGCCTACGGCACCGCCAAGAGCGGCGTGGGCGTGGCGTCCATGGGGGTGATGCGCCCGGAACTGGTGATGAAGTCCATCGTCCCCGTCGTCATGGCCGGAGTGCTCGGTATCTACGGCCTCATCATCGCCGTCATCATCTCCACCGGCATCAACCCCAAGGCCAAGCCCTACTTCCTCTTCGACGGTTACGCCCACCTCTCCTCCGGTCTCGCCTGCGGCCTCGCCGGTCTCGCCGCCGGCATGGCCATCGGCATCGTCGGCGACGCCGGAGTCAGGGCCAATGCGCAGCAGCCAAAGTTGTTCGTGGGCATGATCCTCATCCTTATCTTTGCAGAAGATCTTGCTCTGTATGGCCTGATTGTTGGTATCATCCTCTCGTCTCGTGCGGGCCAATCTCGAGCGGATTAGAGGGTTTTGGAAGAACAAGACACGGTTCACCATTGTATTCTATTCCAAGTGTTAATTTCTTCTTATAGACTGCTTGGTCTTGTCTGTGTTTATACTCATTGTCTGTATTCAAGCTATTGTGGGTTGTTGTATTTATTATTTGAATTTTTGAAGTAATAATCGGTACCAGGCCGTCCGAGATGTGATAATAATGAATTGATAATTAATAGGCAACCAACAGCTAGACTTACTTTTAAAAAAATAAGNNAGAGAATTATAAAATACCTTGAGGGGGGCCCGGTCCAATTCGCCCTTAGTGAGTGGTTTACCCCGCTCATGGCCGGCTTTTACACGTCGGACTGGGAACCCTGGGTACCCAATTAATGCCTTGAGAAATCCCTTTGCAGTTGGCTAATACAAAAGGCCCACCAACTCCTTCCAAATTGCCAATTATTGGAATGGACCCCCTGACGGGCCTAAGCGGGGGTGGGGGTACCCGGTGACTTAACTTCAACCTTCCCCTTTTGGTTTCCTTTTTTACATTACCGTTCCGTAGTTAATGGCCCTAGGCCA]




>consensus_13697#1
TATTCTCCTGCATGGGCGCCGCCTACGGCACCGCCAAGAGCGGCGTGGGCGTGGCGTCCA
TGGGGGTGATGCGCCCGGAACTGGTGATGAAGTCCATCGTCCCCGTCGTCATGGCCGGAG
TGCTCGGTATCTACGGCCTCATCATCGCCGTCATCATCTCCACCGGCATCAACCCCAAGG
CCAAGCCCTACTTCCTCTTCGACGGTTACGCCCACCTCTCCTCCGGTCTCGCCTGCGGCC
TCGCCGGTCTCGCCGCCGGCATGGCCATCGGCATCGTCGGCGACGCCGGAGTCAGGGCCA
ATGCGCAGCAGCCAAAGTTGTTCGTGGGCATGATCCTCATCCTTATCTTTGCAGAAGATC
TTGCTCTGTATGGCCTGATTGTTGGTATCATCCTCTCGTCTCGTGCGGGCCAATCTCGAG
CGGATTAGAGGGTTTTGGAAGAACAAGACACGGTTCACCATTGTATTCTATTCCAAGTGT
TAATTTCTTCTTATAGACTGCTTGGTCTTGTCTGTGTTTATACTCATTGTCTGTATTCAA
GCTATTGTGGGTTGTTGTATTTATTATTTGAATTTTTGAAGTAATAATCGGTACCAGGCC
GTCCGAGATGTGATAATAATGAATTGATAATTAATAGGCAACCAACAGCTAGACTTACTT
TTAAAAAAATAAGNNAGAGAATTATAAAATACCTTGAGGGGGGCCCGGTCCAATTCGCCC
TTAGTGAGTGGTTTACCCCGCTCATGGCCGGCTTTTACACGTCGGACTGGGAACCCTGGG
TACCCAATTAATGCCTTGAGAAATCCCTTTGCAGTTGGCTAATACAAAAGGCCCACCAAC
TCCTTCCAAATTGCCAATTATTGGAATGGACCCCCTGACGGGCCTAAGCGGGGGTGGGGG
TACCCGGTGACTTAACTTCAACCTTCCCCTTTTGGTTTCCTTTTTTACATTACCGTTCCG
TAGTTAATGGCCCTAGGCCA

consensusID : consensus_13697#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 358
fasta sequence

                              [CCCTACTTNCTCTTCGACGGTTACNCCCACCTCTCCTCCGGTCTCGCCTGCGGNGCTCACCGGTCTCGCCGCCGGCATGGCCATCGGCATCGTCGGCACACCGGANTCANGGCCAATGCCCAACAACCAAAGTTGTTCGTGGGCATNATCCTCATCCTTATCTTTGCAGAAGCTCTTGCTCTGTNTGGCCTGATTGTTGGTATCATCCNCTCGTCTCGTGCGGGCCAATCTCGAACGGATTAAANGGTTTTGGAANAACAACAACNGTTCACANTGTATTCTNTTCCAAGTTGTTAATTCTTCTTATAAACTGCCTGGTCNTGTCNGTGTTCTAAACTCNTTTTCTTTTTTCNANCTA]

[+] EMBL BE228657             [CCCTACTTNCTCTTCGACGGTTACNCCCACCTCTCCTCCGGTCTCGCCTGCGGNGCTCACCGGTCTCGCCGCCGGCATGGCCATCGGCATCGTCGGCACACCGGANTCANGGCCAATGCCCAACAACCAAAGTTGTTCGTGGGCATNATCCTCATCCTTATCTTTGCAGAAGCTCTTGCTCTGTNTGGCCTGATTGTTGGTATCATCCNCTCGTCTCGTGCGGGCCAATCTCGAACGGATTAAANGGTTTTGGAANAACAACAACNGTTCACANTGTATTCTNTTCCAAGTTGTTAATTCTTCTTATAAACTGCCTGGTCNTGTCNGTGTTCTAAACTCNTTTTCTTTTTTCNANCTA]




>consensus_13697#2
CCCTACTTNCTCTTCGACGGTTACNCCCACCTCTCCTCCGGTCTCGCCTGCGGNGCTCAC
CGGTCTCGCCGCCGGCATGGCCATCGGCATCGTCGGCACACCGGANTCANGGCCAATGCC
CAACAACCAAAGTTGTTCGTGGGCATNATCCTCATCCTTATCTTTGCAGAAGCTCTTGCT
CTGTNTGGCCTGATTGTTGGTATCATCCNCTCGTCTCGTGCGGGCCAATCTCGAACGGAT
TAAANGGTTTTGGAANAACAACAACNGTTCACANTGTATTCTNTTCCAAGTTGTTAATTC
TTCTTATAAACTGCCTGGTCNTGTCNGTGTTCTAAACTCNTTTTCTTTTTTCNANCTA

consensusID : consensus_13697#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 290
fasta sequence

                              [ACCAATACCAATCTCTGACTCCTCCGGCCTCCGGCGGCCGGCGAGAGAGATCCCACCCTCACCGACGACGNCGAGCGACCACCATGTCCTCCTCCACCTTCAGCGGCGATGAGACCGCCCCTTTCTTCGGCTTCCTCGGCGCCGCCTCCGCCCTCGTATTCTCCTGTAAGCTCCCAATCTTCCCCTTNACTTTCTCGGGGCCAGATCTGATCTGAGATGAGGTTGACACACGACGCATGCAAGGCATGGGCGCTGNCTACGNACCGCCAAGAGCGACGTGGGCGTGGCGT]

[+] EMBL OSS12002A            [ACCAATACCAATCTCTGACTCCTCCGGCCTCCGGCGGCCGGCGAGAGAGATCCCACCCTCACCGACGACGNCGAGCGACCACCATGTCCTCCTCCACCTTCAGCGGCGATGAGACCGCCCCTTTCTTCGGCTTCCTCGGCGCCGCCTCCGCCCTCGTATTCTCCTGTAAGCTCCCAATCTTCCCCTTNACTTTCTCGGGGCCAGATCTGATCTGAGATGAGGTTGACACACGACGCATGCAAGGCATGGGCGCTGNCTACGNACCGCCAAGAGCGACGTGGGCGTGGCGT]




>consensus_13697#3
ACCAATACCAATCTCTGACTCCTCCGGCCTCCGGCGGCCGGCGAGAGAGATCCCACCCTC
ACCGACGACGNCGAGCGACCACCATGTCCTCCTCCACCTTCAGCGGCGATGAGACCGCCC
CTTTCTTCGGCTTCCTCGGCGCCGCCTCCGCCCTCGTATTCTCCTGTAAGCTCCCAATCT
TCCCCTTNACTTTCTCGGGGCCAGATCTGATCTGAGATGAGGTTGACACACGACGCATGC
AAGGCATGGGCGCTGNCTACGNACCGCCAAGAGCGACGTGGGCGTGGCGT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13697#1      ------------------------------------------------------------
consensus_13697#2      ------------------------------------------------------------
consensus_13697#0      GGCAACGAGATACGGCACCAATACCAATCTCTGACTCCTCCGGCCTCCGGCGGCCGGCGA 60
consensus_13697#3      ------------------------------------------------------------
                                                                                   

consensus_13697#1      ------------------------------------------------------------
consensus_13697#2      ------------------------------------------------------------
consensus_13697#0      GAGAGATCCCACCCTCACCGACGACGGCGAGCGACCACCATGTCCTCCTCCACCTTCAGC 120
consensus_13697#3      ------------------------------------------------------------
                                                                                   

consensus_13697#1      ----------------------------------------------------TATTCTCC 8
consensus_13697#2      ------------------------------------------------------------
consensus_13697#0      GGCGATGAGACCGCCCCTTTCTTCGGCTTCCTCGGCGCCGCCTCCGCCCTCGTATTCTCC 180
consensus_13697#3      ------------------------------------------------------------
                                                                                   

consensus_13697#1      TGCATGGGCGCCGCCTACGGCACCGCCAAGAGCGGCGTGGGCGTGGCGTCCATGGGGGTG 68
consensus_13697#2      ------------------------------------------------------------
consensus_13697#0      TGCATGGGCGCCGCCTACGGCACCGCCAAGAGCGGCGTGGGCGTGGCGTCCATGGGGGTG 240
consensus_13697#3      ------------------------------------------------------------
                                                                                   

consensus_13697#1      ATGCGCCCGGAACTGGTGATGAAGTCCATCGTCCCCGTCGTCATGGCCGGAGTGCTCGGT 128
consensus_13697#2      ------------------------------------------------------------
consensus_13697#0      ATGCGCCCGGAACTGGTGATGAAGTCCATCGTCCCCGTCGTCATGGCCGGAGTGCTCGGT 300
consensus_13697#3      ------------------------------------------------------------
                                                                                   

consensus_13697#1      ATCTACGGCCTCATCATCGCCGTCATCATCTCCACCGGCATCAACCCCAAGGCCAAGCCC 188
consensus_13697#2      ---------------------------------------------------------CCC 3
consensus_13697#0      ATCTACGGCCTCATCATCGCCGTCATCATCTCCACCGGCATCAACCCCAAGGCCAAGCCC 360
consensus_13697#3      ------------------------------------------------------------
                                                                                   

consensus_13697#1      TACTTCCTCTTCGACGGTTACGCCCACCTCTCCTCCGGTCTCGCCTGCGGC-CTCGCCGG 247
consensus_13697#2      TACTTNCTCTTCGACGGTTACNCCCACCTCTCCTCCGGTCTCGCCTGCGGNGCTCACCGG 63
consensus_13697#0      TACTTCCTCTTCGACGGTTACGCCCACCTCTCCTCCGGTCTCGCCTGCGGC-CTCGCCGG 419
consensus_13697#3      ---------------ACCAATACCAATCTCTGACTCC-TCCGGCCTCCGGCGGCCGGCGA 44
                                          *  ** * ****    *  **  **** ***    *  ** 

consensus_13697#1      TCTCGCCGCCGGCATGGCCATCGGCATCGTCGGCGACGCCGGAGTCAGGGCCAATGCGCA 307
consensus_13697#2      TCTCGCCGCCGGCATGGCCATCGGCATCGTCGGC-ACACCGGANTCANGGCCAATGCCCA 122
consensus_13697#0      TCTCGCCGCCGGCATGGCCATCGGCATCGTCGGCGACGCCGGAGTCAGGGCCAATGCGCA 479
consensus_13697#3      GAGAGATCCCACCCTCACCGACGACGNCG--AGCGACCACCATGTCCTCCTCCACCTTCA 102
                           *   **  * *  **  ** *  **   ** **  *    **     * *    **

consensus_13697#1      GCAGCCAAAGTTGTTCGTGGGCATGATCCTCATCCTTATCTTTGCAGAAGATCTTGCTCT 367
consensus_13697#2      ACAACCAAAGTTGTTCGTGGGCATNATCCTCATCCTTATCTTTGCAGAAGCTCTTGCTCT 182
consensus_13697#0      GCAGCCAAAGTTGTTCGTGGGCATGATCCTCATCCTTATCTTTGCAGAAGCTCTTGCTCT 539
consensus_13697#3      GCGGCGATGA--GACCGCCCCTTTCTTCGGCTTCCTCGGCGCCGCCTCCGCCCTCGTATT 160
                        *  * *     *  **      *  **  * ****   *   **    *  ** *   *

consensus_13697#1      GTATGGCCTGATTGTTGGTATCATCCTCTCGTCTCGTGCGGGCCAATCTCGAGCGGATTA 427
consensus_13697#2      GTNTGGCCTGATTGTTGGTATCATCCNCTCGTCTCGTGCGGGCCAATCTCGAACGGATTA 242
consensus_13697#0      GTATGGCCTGATTGTTGGTATCATCCTCTCGTCTCGTGCGGGCCAATCTCGAGCGGATTA 599
consensus_13697#3      CTCCTGTA-AGCTCCCAATCTTCCCCTTNACTTTCTCG-GGGCCAGATCTGATCTGAGAT 218
                        *   *      *     * *   **     * **  * ******     ** * **   

consensus_13697#1      GAGGGTTTTGGAAGAACAAGACACGGTTCACCATTGTATTCTATTCCAAGTGTTAATTTC 487
consensus_13697#2      AANGGTTTTGGAANAACAACA-ACNGTTCAC-ANTGTATTCTNTTCCAAGTTGTTAATTC 300
consensus_13697#0      GAGGGTTTTGGAAGAACAAGACACGGTTCACCATTGTATTCTATTCCAAGTGTTAATTTC 659
consensus_13697#3      GAGG----TTGACACACGACGCATGCAAGGCATGGGCGCTGNCTACGNACCGCCAAGAGC 274
                        * *    * **   ** *   *       *    *   *   * *  *      *   *

consensus_13697#1      TTCTTATAGACTGCTTGGTCTTGTCTGTGTT-TATACTCATTGTCTGTATTCAAGCTATT 546
consensus_13697#2      TTCTTATAAACTGCCTGGTCNTGTCNGTGTTCTAAACTCNTTTTCTTTTTTCNANCTA-- 358
consensus_13697#0      TTCTTATAGACTGCTTGGTCTTGTCTGTGTT-TATACTCATTGTCTGTATTCAAGCTATT 718
consensus_13697#3      GACGTGGGCGTGGCGT-------------------------------------------- 290
                         * *       ** *                                            

consensus_13697#1      GTGGGTTGTTGTATTTATTATTTGAATTTTTGAAGTAATAATCGGTACCAGGCCGTCCGA 606
consensus_13697#2      ------------------------------------------------------------
consensus_13697#0      GTGGGTTGTTGTATTTATTATTTGAATTTTTGAAGTAATAATCGGTACCAGGCCGTCCGA 778
consensus_13697#3      ------------------------------------------------------------
                                                                                   

consensus_13697#1      GATGTGAT-AATAATGAATTGATAATTAATAGGCAACCAACAGCTAGACTTACTTTTAAA 665
consensus_13697#2      ------------------------------------------------------------
consensus_13697#0      GATGTGATTAATAATGAATGAATAAATAAATA--AGCAAACAAACAAGCTAGACTTAAAA 836
consensus_13697#3      ------------------------------------------------------------
                                                                                   

consensus_13697#1      AAAATAAGNNAGAGAATTATAAAATACCTTGAGGGGGGCCCGGTCCAATTCGCCCTTAGT 725
consensus_13697#2      ------------------------------------------------------------
consensus_13697#0      AAAAAAAAAA------------------CCGAGGGGGGGCCGGTCCCAT----CCCCTAT 874
consensus_13697#3      ------------------------------------------------------------
                                                                                   

consensus_13697#1      GAGTGGTTTACCCCGCTCATGGCCGGCTTTTACACGTCGGACTGGGAACCCTGGGTACCC 785
consensus_13697#2      ------------------------------------------------------------
consensus_13697#0      GGGGCGTTTACGGCGCT-ATGGCCCGGTACCAC----TGGGCTGGAAACC-TGCGTACC- 927
consensus_13697#3      ------------------------------------------------------------
                                                                                   

consensus_13697#1      AATTAATGCCTTGAGAAATCCCTTTGCAGTTGGCTAATACAAAAGGCCCACCAACTCCTT 845
consensus_13697#2      ------------------------------------------------------------
consensus_13697#0      -ATTAATGCT---GAGCATTCCTTTGCAGTGCGATAGAAAGGCGCCTTCCTTCAAGTGCA 983
consensus_13697#3      ------------------------------------------------------------
                                                                                   

consensus_13697#1      CCAAATTGCCAATTATTGGAATGGACCCCCTGACGGGCCTAAGCGGGGGTGGGGGTACCC 905
consensus_13697#2      ------------------------------------------------------------
consensus_13697#0      CCTAGGAAGGACGCTTTGGATT-------------------------------------- 1005
consensus_13697#3      ------------------------------------------------------------
                                                                                   

consensus_13697#1      GGTGACTTAACTTCAACCTTCCCCTTTTGGTTTCCTTTTTTACATTACCGTTCCGTAGTT 965
consensus_13697#2      ------------------------------------------------------------
consensus_13697#0      ------------------------------------------------------------
consensus_13697#3      ------------------------------------------------------------
                                                                                   

consensus_13697#1      AATGGCCCTAGGCCA 980
consensus_13697#2      ---------------
consensus_13697#0      ---------------
consensus_13697#3      ---------------