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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13698#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 2041 fasta sequence
[CCACCCGTGAAGCTCTGGAGTCGAGCGTGAACTTGGTCCACTACGCCATGGCGGCCGCACCACAGCAATCCGTGCACCCAAGCTTGCCCTCCTCAACCTCAACCCTCCGCCTCCTCATCTCCTCCTCCCCACGACGGCCTCCTCCGCCGCCGCCAAGAGCCCGCCGGTATAACAGGCTCGCGGCGTCGGCTTCGGCGGCGCGGGAGATGCCGTGGCCGCACGTGCTGACGGTGGCCGGCTCCGACTCCGGCGGCGGCGCCGGCATCCAGGCCGACATCAAGGCCTGCGCCGCGCTGGGAGCCTACTGCTCCTCCGTCGTCACCGCCGTCACTGCCCAGAACACCGCCGGCGTCCAGGGGATTCATGTGGTGCCAGAGGAGTTCATCCGGGAGCAGCTCAACTCGGTTCTTTCGGACATGTCGGTGGATGTGGTCAAGACAGGAATGCTCCCTTCAATCGGAGTAGTCAGAGTTTTATGTGAAAGTCTAAAGAAGTTTCCAGTCAAAGGCAGCTTTAGTGGTGGATCCAGTTATGGTGTCCACAAGTGGAGATACTCTTTCAGAATCATCTACTCTCTCTGTATATAGGGATGAATTATTTGCTATGGCTGATATAGTCACCCCAAATGTGAAAGAAGCGTCGAGATTACTTGGGGGTGTATCTTTGCGCACTGTTTCTGACATGCGCAATGCAGCGGAGTCCATTTACAAATTTGGTCCAAAACATGTACTTGTGAAAGGTGGGGATATGCTAGAATCCTCAGATGCAACTGATGTATTTTTTGATGGTAAGGAGTTCATTGAGCTCCATGCGCATCGCATAAAGACCCATAACACACATGGAACTGGTTGCACTTTAGCTTCATGTATAGCTTCCGAATTAGCGAAAGGTGCAACGATGCTGCATGCTGTTCAGGTGGCTAAGAATTTTGTAGAATCTGCTCTTCATCACAGTAAAGATCTTGTCGTTGGAAATGGACCTCAAGGCCCTTTTGATCACCTTTTCAAGCTCAAGTGTCCGCCATACAATGTTGGCTCACAGCCAAGCTTTAAGCCAGACCAACTCTTCCTGTATGCAGTGACAGACTCTGGGATGAACAAAAAGT-GGGGTCGTTCAATCAAAGAAGCTGTGCAAGCTGCCATTGAAGGTGGCGCTACCATTGTACAACTGAGAGAAAAAGATTCCGAAACAAGAGAGTTTTTGGAAGCAGCCAAAGCATGCATGGAGATTTGCAAGTCCAGTGGAGTACCACTGCTGATCAACGACCGGGTAGACATTGCCCTGGCATGCAATGCAGATGGTGTCCATGTTGGTCAATTGGACATGTCGGCACACGAAGTGCGGGAGCTCCTAGGGCCGGGTAAAATCATCGGCGTCTCGTGCAAGACCCCTGCTCAAGCCCAGCAGGCCTGGAATGATGGAGCAGACTACATTGGCTGTGGCGGTGTTTTCCCTACCTCCACGAAGGCGAACAATCCTACATTGGGGTTTGATGGCTTGAAGACAGTTTGCCTGGCATCTAAGCTGCCTGTGGTCGCTATTGGCGGCATCAACGCTTCAAATGCAGGTTCAGTGATGGAGCTTGGTCTCCCAAACCTCAAAGGCGTCGCAGTAGTCTCCGCTCTGTTTGACCGTCCGAGTGTCGTAGCCGAAACAAGAAACATGAAATCCATCTTGACCAACACCTCTAGAACCTAGAGCTACTACAATATTCTTTGTTCGAAGGGGATATGTTTATCAAAATGAAGAGATGTTTCCAACTTTAATAATCAGAAGGCATTTCTTGTAATAATGCTTGATCAAAAGCATCTGTGATGCAGGGGAATGAGGAATCACAATCTTGCATCATTGGGATGTAAGGTACAATGTTCAGATTTCTTTTACATCTTTTGAGCAAATTATCCAACAAATTTTGTTGAAAGTTGGTAGTACAAAATGAAAGGGTGAAAGGCTGTAACTTTCAACTTCTTTAAGCTTTCAAAATGAATGTTGATGCTATCATTTAGCTATTCGCTAGTTGTTTTTTTTTTGTCAATCAGTG]
[+] EMBL AK100920 [CCACCCGTGAAGCTCTGGAGTCGAGCGTGAACTTGGTCCACTACGCCATGGCGGCCGCACCACAGCAATCCGTGCACCCAAGCTTGCCCTCCTCAACCTCAACCCTCCGCCTCCTCATCTCCTCCTCCCCACGACGGCCTCCTCCGCCGCCGCCAAGAGCCCGCCGGTATAACAGGCTCGCGGCGTCGGCTTCGGCGGCGCGGGAGATGCCGTGGCCGCACGTGCTGACGGTGGCCGGCTCCGACTCCGGCGGCGGCGCCGGCATCCAGGCCGACATCAAGGCCTGCGCCGCGCTGGGAGCCTACTGCTCCTCCGTCGTCACCGCCGTCACTGCCCAGAACACCGCCGGCGTCCAGGGGATTCATGTGGTGCCAGAGGAGTTCATCCGGGAGCAGCTCAACTCGGTTCTTTCGGACATGTCGGTGGATGTGGTCAAGACAGGAATGCTCCCTTCAATCGGAGTAGTCAGAGTTTTATGTGAAAGTCTAAAGAAGTTTCCAGTCAAAGGCAGCTTTAGTGGTGGATCCAGTTATGGTGTCCACAAGTGGAGATACTCTTTCAGAATCATCTACTCTCTCTGTATATAGGGATGAATTATTTGCTATGGCTGATATAGTCACCCCAAATGTGAAAGAAGCGTCGAGATTACTTGGGGGTGTATCTTTGCGCACTGTTTCTGACATGCGCAATGCAGCGGAGTCCATTTACAAATTTGGTCCAAAACATGTACTTGTGAAAGGTGGGGATATGCTAGAATCCTCAGATGCAACTGATGTATTTTTTGATGGTAAGGAGTTCATTGAGCTCCATGCGCATCGCATAAAGACCCATAACACACATGGAACTGGTTGCACTTTAGCTTCATGTATAGCTTCCGAATTAGCGAAAGGTGCAACGATGCTGCATGCTGTTCAGGTGGCTAAGAATTTTGTAGAATCTGCTCTTCATCACAGTAAAGATCTTGTCGTTGGAAATGGACCTCAAGGCCCTTTTGATCACCTTTTCAAGCTCAAGTGTCCGCCATACAATGTTGGCTCACAGCCAAGCTTTAAGCCAGACCAACTCTTCCTGTATGCAGTGACAGACTCTGGGATGAACAAAAAGT GGGGTCGTTCAATCAAAGAAGCTGTGCAAGCTGCCATTGAAGGTGGCGCTACCATTGTACAACTGAGAGAAAAAGATTCCGAAACAAGAGAGTTTTTGGAAGCAGCCAAAGCATGCATGGAGATTTGCAAGTCCAGTGGAGTACCACTGCTGATCAACGACCGGGTAGACATTGCCCTGGCATGCAATGCAGATGGTGTCCATGTTGGTCAATTGGACATGTCGGCACACGAAGTGCGGGAGCTCCTAGGGCCGGGTAAAATCATCGGCGTCTCGTGCAAGACCCCTGCTCAAGCCCAGCAGGCCTGGAATGATGGAGCAGACTACATTGGCTGTGGCGGTGTTTTCCCTACCTCCACGAAGGCGAACAATCCTACATTGGGGTTTGATGGCTTGAAGACAGTTTGCCTGGCATCTAAGCTGCCTGTGGTCGCTATTGGCGGCATCAACGCTTCAAATGCAGGTTCAGTGATGGAGCTTGGTCTCCCAAACCTCAAAGGCGTCGCAGTAGTCTCCGCTCTGTTTGACCGTCCGAGTGTCGTAGCCGAAACAAGAAACATGAAATCCATCTTGACCAACACCTCTAGAACCTAGAGCTACTACAATATTCTTTGTTCGAAGGGGATATGTTTATCAAAATGAAGAGATGTTTCCAACTTTAATAATCAGAAGGCATTTCTTGTAATAATGCTTGATCAAAAGCATCTGTGATGCAGGGGAATGAGGAATCACAATCTTGCATCATTGGGATGTAAGGTACAATGTTCAGATTTCTTTTACATCTTTTGAGCAAATTATCCAACAAATTTTGTTGAAAGTTGGTAGTACAAAATGAAAGGGTGAAAGGCTGTAACTTTCAACTTCTTTAAGCTTTCAAAATGAATGTTGATGCTATCATTTAGCTATTCGCTAGTTGTTTTTTTTTTGTCAATCAGTG]
[+] EMBL AK066087 [ TGAAGCTCTGGAGTCGAGCGTGAACTTGGTCCACTACGCCATGGCGGCCGCACCACAGCAATCCGTGCACCCAAGCTTGCCCTCCTCAACCTCAACCCTCCGCCTCCTCATCTCCTCCTCCCCACGACGGCCTCCTCCGCCGCCGCCAAGAGCCCGCCGGTATAACAGGCTCGCGGCGTCGGCTTCGGCGGCGCGGGAGATGCCGTGGCCGCACGTGCTGACGGTGGCCGGCTCCGACTCCGGCGGCGGCGCCGGCATCCAGGCCGACATCAAGGCCTGCGCCGCGCTGGGAGCCTACTGCTCCTCCGTCGTCACCGCCGTCACTGCCCAGAACACCGCCGGCGTCCAGGGGATTCATGTGGTGCCAGAGGAGTTCATCCGGGAGCAGCTCAACTCGGTTCTTTCGGACATGTCGGTGGATGTGGTCAAGACAGGAATGCTCCCTTCAATCGGAGTAGTCAGAGTTTTATGTGAAAGTCTAAAGAAGTTTCCAGTCAA AGCTTTAGTGGTGGATCCAGTTATGGTGTCCACAAGTGGAGATACTCTTTCAGAATCATCTACTCTCTCTGTATATAGGGATGAATTATTTGCTATGGCTGATATAGTCACCCCAAATGTGAAAGAAGCGTCGAGATTACTTGGGGGTGTATCTTTGCGCACTGTTTCTGACATGCGCAATGCAGCGGAGTCCATTTACAAATTTGGTCCAAAACATGTACTTGTGAAAGGTGGGGATATGCTAGAATCCTCAGATGCAACTGATGTATTTTTTGATGGTAAGGAGTTCATTGAGCTCCATGCGCATCGCATAAAGACCCATAACACACATGGAACTGGTTGCACTTTAGCTTCATGTATAGCTTCCGAATTAGCGAAAGGTGCAACGATGCTGCATGCTGTTCAGGTGGCTAAGAATTTTGTAGAATCTGCTCTTCATCACAGTAAAGATCTTGTCGTTGGAAATGGACCTCAAGGCCCTTTTGATCACCTTTTCAAGCTCAAGTGTCCGCCATACAATGTTGGCTCACAGCCAAGCTTTAAGCCAGACCAACTCTTCCTGTATGCAGTGACAGACTCTGGGATGAACAAAAAGT GGGGTCGTTCAATCAAAGAAGCTGTGCAAGCTGCCATTGAAGGTGGCGCTACCATTGTACAACTGAGAGAAAAAGATTCCGAAACAAGAGAGTTTTTGGAAGCAGCCAAAGCATGCATGGAGATTTGCAAGTCCAGTGGAGTACCACTGCTGATCAACGACCGGGTAGACATTGCCCTGGCATGCAATGCAGATGGTGTCCATGTTGGTCAATTGGACATGTCGGCACACGAAGTGCGGGAGCTCCTAGGGCCGGGTAAAATCATCGGCGTCTCGTGCAAGACCCCTGCTCAAGCCCAGCAGGCCTGGAATGATGGAGCAGACTACATTGGCTGTGGCGGTGTTTTCCCTACCTCCACGAAGGCGAACAATCCTACATTGGGGTTTGATGGCTTGAAGACAGTTTGCCTGGCATCTAAGCTGCCTGTGGTCGCTATTGGCGGCATCAACGCTTCAAATGCAGGTTCAGTGATGGAGCTTGGTCTCCCAAACCTCAAAGGCGTCGCAGTAGTCTCCGCTCTGTTTGACCGTCCGAGTGTCGTAGCCGAAACAAGAAACATGAAATCCATCTTGACCAACACCTCTAGAACCTAGAGCTACTACAATATTCTTTGTTCGAAGGGGATATGTTTATCAAAATGAAGAGATGTTTCCAACTTTAATAATCAGAAGGCATTTCTTGTAATAATGCTTGATCAAAAGCATCTGTGATGCAGGGGAATGAGGAATCACAATCTTGCATCATTGGGATGTAAGGTACAATGTTCA ]
[+] EMBL AK122089 [ GCTTGCCCTCCTCAACCTCAACCCTCCGCCTCCTCATCTCCTCCTCCCCACGACGGCCTCCTCCGCCGCCGCCAAGAGCCCGCCGGTATAACAGGCTCGCGGCGTCGGCTTCGGCGGCGCGGGAGATGCCGTGGCCGCACGTGCTGACGGTGGCCGGCTCCGACTCCGGCGGCGGCGCCGGCATCCAGGCCGACATCAAGGCCTGCGCCGCGCTGGGAGCCTACTGCTCCTCCGTCGTCACCGCCGTCACTGCCCAGAACACCGCCGGCGTCCAGGGGATTCATGTGGTGCCAGAGGAGTTCATCCGGGAGCAGCTCAACTCGGTTCTTTCGGACATGTCGGTGGATGTGGTCAAGGCAGGAATGCTCCCTTCAATCGGAGTAGTCAGAGTTTTATGTGAAAGTCTAAAGAAGTTTCCAGTCAAAGGCAGCTTTAGTGGTGGATCCAGTTATGGTGTCCACAAGTGGAGATACTCTTTCAGAATCATCTACTCTCTCTGTATATAGGGATGAATTATTTGCTATGGCTGATATAGTCACCCCAAATGTGAAAGAAGCGTCGAGATTACTTGGGGGTGTATCTTTGCGCACTGTTTCTGACATGCGCAATGCAGCGGAGTCCATTTACAAATTTGGTCCAAAACATGTACTTGTGAAAGGTGGGGATATGCTAGAATCCTCAGATGCAACTGATGTATTTTTTGATGGTAAGGAGTTCATTGAGCTCCATGCGCATCGCATAAAGACCCATAACACACATGGAACTGGTTGCACTTTAGCTTCATGTATAGCTTCCGAATTAGCGAAAGGTGCAACGATGCTGCATGCTGTTCAGGTGGCTAAGAATTTTGTAGAATCTGCTCTTCATCACAGTAAAGATCTTGTCGTTGGAAATGGACCTCAAGGCCCTTTTGATCACCTTTTCAAGCTCAAGTGTCCGCCATACAATGTTGGCTCACAGCCAAGCTTTAAGCCAGACCAACTCTTCCTGTATGCAGTGACAGACTCTGGGATGAACAAAAAGT GGGGTCGTTCAATCAAAGAAGCTGTGCAAGCTGCCATTGAAGGTGGCGCTACCATTGTACAACTGAGAGAAAAAGATTCCGAAACAAGAGAGTTTTTGGAAGCAGCCAAAGCATGCATGGAGATTTGCAAGTCCAGTGGAGTACCACTGCTGATCAACGACCGGGTAGACATTGCCCTGGCATGCAATGCAGATGGTGTCCATGTTGGTCAATTGGACATGTCGGCACACGAAGTGCGGGAGCTCCTAGGGCCGGGTAAAATCATCGGCGTCTCGTGCAAGACCCCTGCTCAAGCCCAGCAGGCCTGGAATGATGGAGCAGACTACATTGGCTGTGGCGGTGTTTTCCCTACCTCCACGAAGGCGAACAATCCTACATTGGGGTTTGATGGCTTGAAGACAGTTTGCCTGGCATCTAAGCTGCCTGTGGTCGCTATTGGCGGCATCAACGCTTCAAATGCAGGTTCAGTGATGGAGCTTGGTCTCCCAAACCTCAAAGGCGTCGCAGTAGTCTCCGCTCTGTTTGACCGTCCGAGTGTCGTAGCCGAAACAAGAAACATGAAATCCATCTTGACCAACACCTCTAGAACCTAGAGCTACTACAATATTCTTTGTTCGAAGGGGATATGTTTATCAAAATGAAGAGATGTTTCCAACTTTAATAATCAGAAGGCATTTCTTGTAATAATGCTTGATCAAAAGCATCTGTGATGCAGGGGAATGAGGAATCACAATCTTGCATCATTGGTATGTAAGGTTCAATGTTCATATTTCTTTTACATCTTTTGAGCAAATTATCCAACAAATTTTGTTGAAAGTTGGTAGTACAAAATGAAAGGGTGAAAGGCTGTtt ]
[+] EMBL CF309479 [ TCCCCAGATGCAACTGATGTATTTTTTGATGGTAAGGAGTTCATTGAGCTCCATGCGCATCGCATAAAGACCCATAACACACATGGAACTGGTTGCACTTTAGCTTCATGTATAGCTTCCGAATTAGCGAAAGGTGCAACGATGCTGCATGCTGTTCAGGTGGCTAAGAATTTTGTAGAATCTGCTCTTCATCACAGTAAAGATCTTGTCGTTGGAAATGGACCTCAAGGCCCTTTTGATCACCTTTTCAAGCTCAAGTGTCCGCCATACAATGTTGGCTCACAGCCAAGCTTTAAGCCAGACCAACTCTTCCTGTATGCAGTGACAGACTCTGGGATGAACAAAAAGTGGGGGTCGTTCAATCAAAGAAGCTGTGCAAGCTGCCATTGAAGGTGGCGCTACCATTGTACAACTGAGAGAAAAAGATTCCGAAACAAGAGAGTTTTTGGAAGCAGCCAAAGCATGCATGGAGATTTGCAAGTCCAGTGGAGTACCACTGCTGATCAACGACCGGGTAGACATTGCCCTGGCATGCAATGCAGATGGTGTCCATGTTGGTCAATTGGACATGTCGG ACACGAAGTGC ]
[+] EMBL AU057828 [ GGGTCGTTCAATCAAAGAAGCTGTGCAAGCTGCCATTGAAGGTGGCGCTACCATTGTACAACTGAGAGAAAAAGATTCCGAAACAAGAGAGTTTTTGGAAGCAGCCAAAGCATGCATGGAGATTTGCAAGTCCAGTGGAGTACCACTGCTGATCAACGACCGGGTAGACATTGCCCTGGCATGCAATGCAGATGGTGTCCATGTTGGTCAATTGGACATGTCGGCACACGAAGNCGGGGAGCTCCTAGGGCCGGGTAAAATCATCGGCGTCTCGTGCAAGACCCCTGCTCAAGCCCAGCAGGCCTGGAATGATGGAGCAGACTACATTGGCTGTGGCGGTGTTTTCCCTACCTCCACGAAGGCGAACAATCCTACATTGGGGTTTGATGGCTTGAAGACAGTTTGCCTGGCATCTAAGCTGCCTGTGGTCGCTATTGGCGGCATCAACGCTTCAAATGCAGGTTCAGTGATGGAGCTTGGTCTCCCAAACCTCAAAGGCGTCGCAGTAGTCTCCGCTCTGTTTGACCGTCCGAGTGTCGTAGCCGAAACAAGAAACATGAAATCCATCTTGACCAACACCTCTAGAACCTNGAGCTACTACAATATTCTTTGTTCGAAGGGGATATGTTTATCAAAATGAAGAGATGTTTCCAACTTTAAAAAaa ]
[-] EMBL CB656742 [ GCCAAAGCATGCATGGAGATTTGCAAGTCCAGTGGAGTACCACTGCTGATCAACGACCGGGTAGACATTGCCCTGGCATGCAATGCAGATGGTGTCCATGTTGGTCAATTGGACATGTCGGCACACGAAGTGCGGGAGCTCCTAGGGCCGGGTAAAATCATCGGCGTCTCGTGCAAGACCCCTGCTCAAGCCCAGCAGGCCTGGAATGATGGAGCAGACTACATTGGCTGTGGCGGTGTTTTCCCTACCTCCACGAAGGCGAACAATCCTACATTGGGGTTTGATGGCTTGAAGACAGTTTGCCTGGCATCTAAGCTGCCTGTGGTCGCTATTGGCGGCATCAACGCTTCAAATGCAGGTTCAGTGATGGAGCTTGGTCTCCCAAACCTCAAAGGCGTCGCAGTAGTCTCCGCTCTGTTTGACCGTCCGAGTGTCGTAGCCGAAACAAGAAACATGAAATCCATCTTGACCAACACCTCTAGAACCTAGAGCTACTACAATATTCTTTGTTCGAAGGGGATATGTTTATCAAAATGAAGAGATGTTTCCAACTTTAATAATCAGAAGGCATTTCTTGTAATAATGCTTGATCAAAAGCATCTGTGATGCAGGGGAATGAGGAATCACAATCTTGCATCATTGGGATGTAAGGTACAATGTTCAGATTTCTTTTACATCTTTTGAGCAAATTATCCAACAAATTTTGTTGAAAGTTGGTAGTACAAAATGAAAGGGTGAAAGGCTGTAACTTTCAACTTCTTTAAGCTTTCAAAATGAATGTT ]
[-] EMBL CB656741 [ CCTGGCATGCAATGCAGATGGTGTCCATGTTGGTCAATTGGACATGTCGGCACACGAAGTGCGGGAGCTCCTAGGGCCGGGTAAAATCATCGGCGTTTGGTGCAAGACCCCTGCTCAAGCCCAGCAGGCCTGGAATGATGGAGCAGACTACATTGGCTGTGGCGGTGTTTTCCCTCCCTCCACGAAGGCGAACAATCCTACATTGGGGTTTGATGGCTTGAAGACAGTTTGCCTGGCATCTAAGCTGCCGGTGGTCGCTATTGGCGGCATCAACGCTTCAAATGCAGGTTCAGTGATGGAGCTTGGTCTCCCAAACCTCAAAGGCGTCGCAGTAGTTTCCGCTCTGTTTGACCGTCCGAGTGTCGTAGCCGAAACAAGAAACATGAAATCCATCTTGCCCAACCCCTCTAGACCCTAGAGCTACTACAATATTCTTTGTTCGAAGGGGATATGTTTATCAAAATGAAGAGATGTTTCCAACTTTAATAATCAGAAGGCATTTCTTGTAATAATGCTTGATCAAAAGCATCTGTGATGCAGGGGAATGAGGAATCACAATCTTGCATCATTGGGATGTAAGGTACAATGTTCAGATTTCTTTTACATCTTTTGGGCAAATTATCCGACAAATTTTGTTGAAAGTTGGTACTACAAAATGAAAGGGTCAAAGCCTGTAACTTTCAACTTCTTTttgaagg ]
[-] EMBL CB656778 [ AAAATCATCGGCGTTTGGTGCAAGACCCCTGCTCAAGCCCAGCAGGCCTGGAATGATGGAGCAGACTACATTGGCTGTGGCGGTGTTTTCCCTCCCTCCAGGAAGGCGAACAATCCTACATTGGGGTTTGATGGCTTGAAGACAGTTTGCCTGGCATTTAAGCTGCCTGTGGTCGTTATTGGCGGCATCAACGCTTCAAATGCAGGTTCAGTGATGGAGCTTGGTCTCCCAAACCTCAAAGGCGTCGCAGTAGTCTCCGCTCTGTTTGACCGTCCGAGTGTCGTAGCCGAAACAAGAAACATGAAATCCATCTTGACCAACCCCTCTAGAACCTAGAGCTAGTACAATATTCTTTGTTCGAAGGGGATATGTTTATCAAAATGAAGAGATGTTTCCAACTTTAATAATCAGAAGGCATTTCTTGTAATAATGCTTGATCAAAAGCATCTGTGATGCAGGGGAATGAGGAATCACAATCTTGCATCATTGGGATGTAAGGTCCAATGTTCAGATTTCTTTTACATCTTTTGAGCAAATTATCCAACAAATTTTGTTGAAAGTTGGTAGTACAAAATGAAAGGGTGAAAGGCTGTAACTTTCAACTTCTTTTAGaaagga ]
[-] EMBL CF309480 [ CCTACCTCCACGAAGGCGAACAATCCTACATTGGGGTTTGATGGCTTGAAGACAGTTTGCCTGGCATCTAAGCTGCCTGTGGTCGCTATTGGCGGCATCAACGCTTCAAATGCAGGTTCAGTGATGGAGCTTGGTCTCCCAAACCTCAAAGGCGTCGCAGTAGTCTCCGCTCTGTTTGACCGTCCGAGTGTCGTAGCCGAAACAAGAAACATGAAATCCATCTTGACCAACACCTTTAGAACCTAGAGCTACTACAATATTCTTTGTTCGAAGGGGATATGTTTATCAAAATGAAGAGATGTTTCCAACTTTAATAATCAGAAGGCATTTCTTGTAATAATGCTTGATCAAAAGCATCTGTGATGCAGGGGAATGAGGAATCACAATCTTGCATCATTGGGATGTAAGGTACAATGTTCGGATTTCTTTTACATCTTTTGAGCAAATTATCCAACAAATTTTGTTGAAAGTTGGTAGTACAAAATGAAAGGGTGAAAGGCTGTAACTTTCAACTTCTTTAAGCTTTCAAAATGAAaaaaaaa ]
[+] EMBL BQ908192 [ GTAGTCTCCGCTCTGTTTGACCGTCCGAGTGTCGTAGCCGAAACAAGAAACATGAAATCCATCTTGACCAACACCTCTAGAACCTAGAGCTACTACAATATTCTTTGTTCGAAGGGGATATGTTTATCAAAATGAAGAGATGTTTCCAACTTTAATAATCAGAAGGCATTTCTTGTAATAATGCTTGATC AAAGCATCTGTGATGCAGGGGAATGAGGAATCACAATCTTGCATCATTGGGATGTAAGGTACAATGTTCAGATTTCTTTTACATCTTTTGAAC AATTATCC ACAAATTTTGTTGAAAGTTGGTAGTAC AAATGAAAGGGTGAAAGGCTGTAACTTTCAACTTCTTTAAGCTTTC AAATGAATGTTGATGCTAaaaaaaa ]
consensusID : consensus_13698#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 864 fasta sequence
[GACGAGACAAGGGGGAGAGAAAAAGATTCCGAAACAAGAGAGTTTTTGGAAGCAGCCAAAGCATGCATGGAGATTTGCAAGTCCAGTGGAGTACCACTGCTGATCAACGACCGGGTAGACATTGCCCTGGCACGCAATGCAGATGGTGTCCATGTTGGTCAATCGGACATGTCGGCACACGAAGTGCGGGAGCTCCTGGGGCCGGGTAAAATCATCGGCGTCTCGTGCAAGACCCCTGCTCAAGCCCAGCAGGCCTGGAATGATGGAGCAGACTACATTGGCTGTGGCGGTGTTTTCCCTACCTNCACGAAGGCGAACAATCCTACATTGGGGTTTGATGGCTTGAAGACAGTTTGCCTGGCATCTAAGCTGNCTGTGGTCGCTATTGGCGGCATCAACGCTT-AAATGCAGGTTCAGNGATGGAGCTTGGTCTCCCAAACCTCAAAGGCGTCGCAGTAGTCTCCGCTCTGTTTGACCGTCCGAGTGTCGTAGCCGAAACAAGAAACATGAAATCCATCTTGACCAACACCTCTAGAACCTAGAGCTACTACAATATTCTTTGTTCGAAGGGGATATGTTTATCAAAATGAAGAGATGTTTCCAACTTTAATAATCAGAAGGCATTTCTTGTAATAATGCTTGATCAAAAGCATCTGTGATGCAGGGGAATGAGGAATCACAATCTTGCATCATTGGGATGTAAGGTACAATGTTCAGATTTCTTTTACATCTTTTGAGCAAATTATCCAACAAATTTTGTTGAAAGTTGGTAGTACAAAATGAAAGGGTGAAAGGCTGTAACTTTCAACTTCTTTAAGAAGGGAAAATGAATGTTGATGCTATCAAAAAAAAAAAAAAAAAAGA]
[+] EMBL CA765813 [GACGAGACAAGGGGGAGAGAAAAAGATTCCGAAACAAGAGAGTTTTTGGAAGCAGCCAAAGCATGCATGGAGATTTGCAAGTCCAGTGGAGTACCACTGCTGATCAACGACCGGGTAGACATTGCCCTGGCACGCAATGCAGATGGTGTCCATGTTGGTCAATCGGACATGTCGGCACACGAAGTGCGGGAGCTCCTGGGGCCGGGTAAAATCATCGGCGTCTCGTGCAAGACCCCTGCTCAAGCCCAGCAGGCCTGGAATGATGGAGCAGACTACATTGGCTGTGGCGGTGTTTTCCCTACCTNCACGAAGGCGAACAATCCTACATTGGGGTTTGATGGCTTGAAGACAGTTTGCCTGGCATCTAAGCTGNCTGTGGTCGCTATTGGCGGCATCAACGCTT AAATGCAGGTTCAGNGATGGAGCTTGGTCTC ]
[-] EMBL CB656779 [ AGATGGTGTCCATGTTGGTCAATTGGACATGTCGGCACACGAAGTGCGGGAGCTCCTAGGGCCGGGTAAAATCATCGGCGTCTCGTGCAAGACCCCTGCTCAAGCCCAGCAGGCCTGGAATGATGGAGCAGACTACATTGGCTGTGGCGGTGTTTTCCCTACCTCCACGAAGGCGAACAATCCTACATTGGGGTTTGATGGCTTGAAGACAGTTTGCCTGGCATCTAAGCTGCCTGTGGTCGCTATTGGCGGCATCAACGCTTCAAATGCAGGTTCAGTGATGGAGCTTGGTCTCCCAAACCTCAAAGGCGTCGCAGTAGTCTCCGCTCTGTTTGACCGTCCGAGTGTCGTAGCCGAAACAAGAAACATGAAATCCATCTTGACCAACACCTCTAGAACCTAGAGCTACTACAATATTCTTTGTTCGAAGGGGATATGTTTATCAAAATGAAGAGATGTTTCCAACTTTAATAATCAGAAGGCATTTCTTGTAATAATGCTTGATCAAAAGCATCTGTGATGCAGGGGAATGAGGAATCACAATCTTGCATCATTGGGATGTAAGGTACAATGTTCAGATTTCTTTTACATCTTTTGAGCAAATTATCCAACAAATTTTGTTGAAAGTTGGTAGTACAAAATGAAAGGGTGAAAGGCTGTAACTTTCAACTTCTTTAAGAAGGGAAAATGAATGTTGATGCTATCAAAAAAAAAAAAAAAAAAGA]
[-] EMBL OSS1358A [ AGGGGATATGTTTATCAAAATGAAGAGATGTTTCCAACTTTAATAATCAGAAGGCATTTCTTGTAATAATGCTTGATCAAAAGCATCTGTGATGCAGGGGAATGAGGAATCACAATCTTGCATCATTGGGATGTAAGGTACAATGTTCAGATTTCTTTTACATCTTTTGAGCAAATTATCCAACAAATTTTGTTGAAAGTTGGTAGTACAAAATGAAAGGGTGANAGGCTGTA ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_13698#0 CCACCCGTGAAGCTCTGGAGTCGAGCGTGAACTTGGTCCACTACGCCATGGCGGCCGCAC 60
consensus_13698#1 ------------------------------------------------------------
consensus_13698#0 CACAGCAATCCGTGCACCCAAGCTTGCCCTCCTCAACCTCAACCCTCCGCCTCCTCATCT 120
consensus_13698#1 ------------------------------------------------------------
consensus_13698#0 CCTCCTCCCCACGACGGCCTCCTCCGCCGCCGCCAAGAGCCCGCCGGTATAACAGGCTCG 180
consensus_13698#1 ------------------------------------------------------------
consensus_13698#0 CGGCGTCGGCTTCGGCGGCGCGGGAGATGCCGTGGCCGCACGTGCTGACGGTGGCCGGCT 240
consensus_13698#1 ------------------------------------------------------------
consensus_13698#0 CCGACTCCGGCGGCGGCGCCGGCATCCAGGCCGACATCAAGGCCTGCGCCGCGCTGGGAG 300
consensus_13698#1 ------------------------------------------------------------
consensus_13698#0 CCTACTGCTCCTCCGTCGTCACCGCCGTCACTGCCCAGAACACCGCCGGCGTCCAGGGGA 360
consensus_13698#1 ------------------------------------------------------------
consensus_13698#0 TTCATGTGGTGCCAGAGGAGTTCATCCGGGAGCAGCTCAACTCGGTTCTTTCGGACATGT 420
consensus_13698#1 ------------------------------------------------------------
consensus_13698#0 CGGTGGATGTGGTCAAGACAGGAATGCTCCCTTCAATCGGAGTAGTCAGAGTTTTATGTG 480
consensus_13698#1 ------------------------------------------------------------
consensus_13698#0 AAAGTCTAAAGAAGTTTCCAGTCAAAGGCAGCTTTAGTGGTGGATCCAGTTATGGTGTCC 540
consensus_13698#1 ------------------------------------------------------------
consensus_13698#0 ACAAGTGGAGATACTCTTTCAGAATCATCTACTCTCTCTGTATATAGGGATGAATTATTT 600
consensus_13698#1 ------------------------------------------------------------
consensus_13698#0 GCTATGGCTGATATAGTCACCCCAAATGTGAAAGAAGCGTCGAGATTACTTGGGGGTGTA 660
consensus_13698#1 ------------------------------------------------------------
consensus_13698#0 TCTTTGCGCACTGTTTCTGACATGCGCAATGCAGCGGAGTCCATTTACAAATTTGGTCCA 720
consensus_13698#1 ------------------------------------------------------------
consensus_13698#0 AAACATGTACTTGTGAAAGGTGGGGATATGCTAGAATCCTCAGATGCAACTGATGTATTT 780
consensus_13698#1 ------------------------------------------------------------
consensus_13698#0 TTTGATGGTAAGGAGTTCATTGAGCTCCATGCGCATCGCATAAAGACCCATAACACACAT 840
consensus_13698#1 ------------------------------------------------------------
consensus_13698#0 GGAACTGGTTGCACTTTAGCTTCATGTATAGCTTCCGAATTAGCGAAAGGTGCAACGATG 900
consensus_13698#1 ------------------------------------------------------------
consensus_13698#0 CTGCATGCTGTTCAGGTGGCTAAGAATTTTGTAGAATCTGCTCTTCATCACAGTAAAGAT 960
consensus_13698#1 ------------------------------------------------------------
consensus_13698#0 CTTGTCGTTGGAAATGGACCTCAAGGCCCTTTTGATCACCTTTTCAAGCTCAAGTGTCCG 1020
consensus_13698#1 ------------------------------------------------------------
consensus_13698#0 CCATACAATGTTGGCTCACAGCCAAGCTTTAAGCCAGACCAACTCTTCCTGTATGCAGTG 1080
consensus_13698#1 ------------------------------------------------------------
consensus_13698#0 ACAGACTCTGGGATGAACAAAAAGTGGGGTCGTTCAATCAAAGAAGCTGTGCAAGCTGCC 1140
consensus_13698#1 ------------------------------------------------------------
consensus_13698#0 ATTGAAGGTGGCGCTACCATTGTACAACTGAGAGAAAAAGATTCCGAAACAAGAGAGTTT 1200
consensus_13698#1 ---------------GACGAGACAAGGGGGAGAGAAAAAGATTCCGAAACAAGAGAGTTT 45
* * *******************************
consensus_13698#0 TTGGAAGCAGCCAAAGCATGCATGGAGATTTGCAAGTCCAGTGGAGTACCACTGCTGATC 1260
consensus_13698#1 TTGGAAGCAGCCAAAGCATGCATGGAGATTTGCAAGTCCAGTGGAGTACCACTGCTGATC 105
************************************************************
consensus_13698#0 AACGACCGGGTAGACATTGCCCTGGCATGCAATGCAGATGGTGTCCATGTTGGTCAATTG 1320
consensus_13698#1 AACGACCGGGTAGACATTGCCCTGGCACGCAATGCAGATGGTGTCCATGTTGGTCAATCG 165
*************************** ****************************** *
consensus_13698#0 GACATGTCGGCACACGAAGTGCGGGAGCTCCTAGGGCCGGGTAAAATCATCGGCGTCTCG 1380
consensus_13698#1 GACATGTCGGCACACGAAGTGCGGGAGCTCCTGGGGCCGGGTAAAATCATCGGCGTCTCG 225
******************************** ***************************
consensus_13698#0 TGCAAGACCCCTGCTCAAGCCCAGCAGGCCTGGAATGATGGAGCAGACTACATTGGCTGT 1440
consensus_13698#1 TGCAAGACCCCTGCTCAAGCCCAGCAGGCCTGGAATGATGGAGCAGACTACATTGGCTGT 285
************************************************************
consensus_13698#0 GGCGGTGTTTTCCCTACCTCCACGAAGGCGAACAATCCTACATTGGGGTTTGATGGCTTG 1500
consensus_13698#1 GGCGGTGTTTTCCCTACCTNCACGAAGGCGAACAATCCTACATTGGGGTTTGATGGCTTG 345
******************* ****************************************
consensus_13698#0 AAGACAGTTTGCCTGGCATCTAAGCTGCCTGTGGTCGCTATTGGCGGCATCAACGCTTCA 1560
consensus_13698#1 AAGACAGTTTGCCTGGCATCTAAGCTGNCTGTGGTCGCTATTGGCGGCATCAACGCTT-A 404
*************************** ****************************** *
consensus_13698#0 AATGCAGGTTCAGTGATGGAGCTTGGTCTCCCAAACCTCAAAGGCGTCGCAGTAGTCTCC 1620
consensus_13698#1 AATGCAGGTTCAGNGATGGAGCTTGGTCTCCCAAACCTCAAAGGCGTCGCAGTAGTCTCC 464
************* **********************************************
consensus_13698#0 GCTCTGTTTGACCGTCCGAGTGTCGTAGCCGAAACAAGAAACATGAAATCCATCTTGACC 1680
consensus_13698#1 GCTCTGTTTGACCGTCCGAGTGTCGTAGCCGAAACAAGAAACATGAAATCCATCTTGACC 524
************************************************************
consensus_13698#0 AACACCTCTAGAACCTAGAGCTACTACAATATTCTTTGTTCGAAGGGGATATGTTTATCA 1740
consensus_13698#1 AACACCTCTAGAACCTAGAGCTACTACAATATTCTTTGTTCGAAGGGGATATGTTTATCA 584
************************************************************
consensus_13698#0 AAATGAAGAGATGTTTCCAACTTTAATAATCAGAAGGCATTTCTTGTAATAATGCTTGAT 1800
consensus_13698#1 AAATGAAGAGATGTTTCCAACTTTAATAATCAGAAGGCATTTCTTGTAATAATGCTTGAT 644
************************************************************
consensus_13698#0 CAAAAGCATCTGTGATGCAGGGGAATGAGGAATCACAATCTTGCATCATTGGGATGTAAG 1860
consensus_13698#1 CAAAAGCATCTGTGATGCAGGGGAATGAGGAATCACAATCTTGCATCATTGGGATGTAAG 704
************************************************************
consensus_13698#0 GTACAATGTTCAGATTTCTTTTACATCTTTTGAGCAAATTATCCAACAAATTTTGTTGAA 1920
consensus_13698#1 GTACAATGTTCAGATTTCTTTTACATCTTTTGAGCAAATTATCCAACAAATTTTGTTGAA 764
************************************************************
consensus_13698#0 AGTTGGTAGTACAAAATGAAAGGGTGAAAGGCTGTAACTTTCAACTTCTTTAAGCTTTCA 1980
consensus_13698#1 AGTTGGTAGTACAAAATGAAAGGGTGAAAGGCTGTAACTTTCAACTTCTTTAAGAAGGGA 824
****************************************************** *
consensus_13698#0 AAATGAATGTTGATGCTATCATTTAGCTATTCGCTAGTTGTTTTTTTTTTGTCAATCAGT 2040
consensus_13698#1 AAATGAATGTTGATGCTATCAAAAAAAAAAAAAAAAAAGA-------------------- 864
********************* * * *
consensus_13698#0 G 2041
consensus_13698#1 -
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||