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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1370#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 3682 fasta sequence
[TTTTCAAGCTATCCCCTATGGCCCTATCCCCCTCTCTCCTCCTCCGGCCCACACACCATTGCCGCATCATCCACCACCGCCTCCTCAGCCGCAGGTGAAAGCGGCCGCCATCCCAGCCCCAGCCCCCCTCCCCCCCCCCCTCTCTCTCTCTCTCCTCGCCATCGCCGCCGAGAGGGGCTTATTCGATGCCGGATGGGGGAGCGCCGGGCGCCGGCCAGGCGGGCGGGGTCGGAGGCGACGAGGGAGCGGGTAATCAATCTCCCTACGGCCCTGAACTGCAGGTGGTTGGCGGGCTCCGCCTCCCGCGAGTTGAGGCCGATGAGGTGACGTGCAGAAGCTGTGGCCGTGCTGGAGTTGCTGTGTCTGACGCTGACGGCAAGGTAAGGATAGTTCAGTCTATACAAAAAGACAATTAGCCCGCGTATAAGATGGAAAATTTAGCGCTCGATGCTTCGATTGGTAGGCAGCCTTGAGATTGTAAACAGATGGCCATTGTCTGTTGTGTCAGCTAGTAAAATTTAGTTAAGACTTAAGCTTATTCATGTTTTCATCAGTCTGAAACCAAACATTTCTGTTTAACGTCAACCCGGCTGTTTTCGCCCGGTCAAAAAATATGATATATTCATATTCATTGTGAGCCCATGCACCTGGGGAAGAGAGTGCTTGCGATCATATGTCTCCATCTTAGCTGAAAGATGCTTGCAGCAAGTCTACCGTTGAGTCAAGGGCAATATGACAACAACAGTAAAAGGGATAAGCCAGAAAAATTGCTTGTTAGCTTTTTCCTGCCATTCCTTGCACCTTCCCCTTGAATATTTTGAGTAACGTGCCCAAGTGGTTCCTCAGGTTGTGAGCCTGTGACCTATTTAACCTCCGATTTCCTGTCCATTCTCCTCCATGATCCAAACTTTCCATCCTAGTTGATAGCAGTATTGCCATGGTCTATTTTTTCTTGTTAAAGACTAATGGCAAAGATGATGCTTTACCTTCTTCTCCTGCCATTGCTCCTCCTCACATGCATCTTTGCATCTTATGTTCATTCGATGGAATCAAGCACCTCCAAGTGCTCCAATATTCCCATCCCTTATCCCTTTGGTATTCTTGGTGGGAACCCTGCCCCAGCCCAAGGGTTTGAGATCACATGTGCCTCATCTGGCCCGATGGTACGCATTAACAATATCATGTTTGGGATTCTTAACATCTCGTTGCTGGATGGTTTTGTAAGCATCTTGGCCAGTGCCACTTCTCAGCAGTGCAAAAGGAATTCTAGCTTCAGCCTTGAGGGGACCAATTTCACGTTCTCAGATACAAGAAACAAATTTACAGCTCTGGGTTGTGATATGGTAGCCATGCTATTGAACGGTAGCAGCGGGTATAGCGGTGGCTGTGCTTCTTTTTGCTCCACCAAAAGCAATATAATTGATGGTATGTGCTCTGGCGTGGCTTGCTGCCAAGCACCAGTACCGAAGGGGTTAATGAAGCTTGAGTTGGAGTTCACTAACATAACTGGGCAGCTCAGCAGGCCCAAGGAGGTCAATAATACTCCAACATGTGGCGAGGCTTTCATCGTGGAGCAGAACTCCTATGTTTTCTCTAGTGTTGATCTGAGCAACACTAACAGGAACAATCCTCAATACCGCCCTGTTGTTCTTGAGTGGTCCATTGATGGTGGCTACTGTGAGGAGGCGAACCGCTTCATGTCATATGCCTGCAAGGAGAACTCCTACTGCTATAACTCATCAAATGGAATTGGATACCGCTGCAATTGCTCCCTTGGGTTTCAGGGGAACCCTTACTTGCAAGGGCCCGATGGATGCCAAGGTAACGAATACATTCATGCTAGTTACCTCAGCTTATGTTTCTTGAATTTAGTAGTCAGCAAGAATAGCTCATGCCTGATTTCGTCTGGTTTCATGTGATTTTTTTATAAGATATTGATGAATGCACCATTAAGAGGCCATGCACGCATAAGTGCATCAACACGAAAGGGAGTTTCTACTGCATGTGCCCAGCAGGGATGAGAGGTGATGGCTTGAAGGAGGGCAGTGGCTGCAATGGAATTGGCACACTGTTGATTGGAATAGGCAAGTTTCTGAAGCCCTGTATCACTGCCTTGCCATGTGAATGATGTAATCATTCAATTTGAAGGCTTGAGTTGATTAATGCTGCATCCAGTAGAGATCCCTGAATTTTCTGTGTCTGTGCAGTTACTGGACTAGCTCTGCTACTGCTTCTCCTTGTTCTCATATTCTGGACCCATTGGCTTGTTAATAAGAGAAAACTTGCGAAGATAAGACAGAGATACTTTATGCAGAATGGTGGAATGTTGCTGAAGCAGAAGATGTTTTCTCAAGGTGCACCACTGCGGATATTTACTTCTAGTGAACTTGAGAAAGCAACCAACAGCTTCAGTGATGACAATATCATTGGTCGAGGTGGATTTGGGATCGTGTACAAAGGTATATTATCCAATCAAATGGTTGTGGCAATCAAGAAGGCGCAGCGAGTTGATCAGAACCAAATGGAACAATTCATAAACGAGTTGGTCATTCTTTCACAAGTGAACCACAAGAATGTGGTCCAGCTATTAGGCTGTTGTCTTGAGACAGAACTTCCCTTGTTAGTTTATGAATTCATCACCAATGGGGCCCTTTTTTCTCATCTTCAAAATACATCTGTCCTGATTTCATGGGAGGACCGCCTAAGGATTGCAGTTGAAACTGCATCAGCACTTGCATACTTACACTTAGCTACAAAGGAACCAATTATTCACAGGGATGTCAAGTCATCAAACATACTCCTTGACGAGAACTTCACTGCAAAGGTGTCTGATTTTGGTGCCTCGAGGCCAATACCACACAACCAGACCCATGTGACAACTTTAGTGCAGGGGACATTGGGGTACATGGACCCTGAATATTTCCAAACAAGCCAGCTAACTGAGAAGAGTGATGTATACAGTTTTGGGGTGGTTCTTATCGAGCTATTGACAAGACAGAAACCTATATCTGATGGTAGGACAGATGATGTGAGAAATCTAGCATGTCATTTTAGTATGTTATTCTATCAGAACCAGTTGTTGGAAATTGTAGATTCTCAAGTAGCTGAGGAAGCTGGCACGAAACATGTTAAAACCGTTGCACAATTGGCTTTACGATGCTTAAGGTCGAGAGGTGAAGAGAGGCCAAGGATGATAGAGGTGGCAATTGAACTTGAAGCTCTGAGAAGGCTGATGAAACAACACTTGGTCCTGCAGACCGAAGAAGACCCTCTGCTCTGCGAATCAGGTCAGCATGCAGATGTAAACATCGAAGCATCCTCCGAGTTTGAGCCTTGATAACATTACCAAGGAGGAGGAAAGCATGGACACCATTCTACTCCCATTCAGGGCCCTCTCATGTTAGTCCTCCCAGCACAAATGGTTTTCCCTTAGTTATTATAACTCAGTCCCCAGTTTCATGACAATGATTTTCTGTGTTGCTCTGAGCTGCCAATCATGTAGAAACCCAGAGACGGGTATACTAGGAATAATTGGAGAGTGTTGTCGAACTCCAATGTCTGTTCAACTATTTCTCAGAAAGAAATATCTGATCCTTTCAGAAGTCAATTTGGTCTTAACATGGTGGTTAAAGTAATTCATTTGGAATGTACCAAACTTTATAAAGAAATGATAGGTTAGTTT]
[+] EMBL AK111662 [TTTTCAAGCTATCCCCTATGGCCCTATCCCCCTCTCTCCTCCTCCGGCCCACACACCATTGCCGCATCATCCACCACCGCCTCCTCAGCCGCAGGTGAAAGCGGCCGCCATCCCAGCCCCAGCCCCCCTCCCCCCCCCCCTCTCTCTCTCTCTCCTCGCCATCGCCGCCGAGAGGGGCTTATTCGATGCCGGATGGGGGAGCGCCGGGCGCCGGCCAGGCGGGCGGGGTCGGAGGCGACGAGGGAGCGGGTAATCAATCTCCCTACGGCCCTGAACTGCAGGTGGTTGGCGGGCTCCGCCTCCCGCGAGTTGAGGCCGATGAGGTGACGTGCAGAAGCTGTGGCCGTGCTGGAGTTGCTGTGTCTGACGCTGACGGCAAGGTAAGGATAGTTCAGTCTATACAAAAAGACAATTAGCCCGCGTATAAGATGGAAAATTTAGCGCTCGATGCTTCGATTGGTAGGCAGCCTTGAGATTGTAAACAGATGGCCATTGTCTGTTGTGTCAGCTAGTAAAATTTAGTTAAGACTTAAGCTTATTCATGTTTTCATCAGTCTGAAACCAAACATTTCTGTTTAACGTCAACCCGGCTGTTTTCGCCCGGTCAAAAAATATGATATATTCATATTCATTGTGAGCCCATGCACCTGGGGAAGAGAGTGCTTGCGATCATATGTCTCCATCTTAGCTGAAAGATGCTTGCAGCAAGTCTACCGTTGAGTCAAGGGCAATATGACAACAACAGTAAAAGGGATAAGCCAGAAAAATTGCTTGTTAGCTTTTTCCTGCCATTCCTTGCACCTTCCCCTTGAATATTTTGAGTAACGTGCCCAAGTGGTTCCTCAGGTTGTGAGCCTGTGACCTATTTAACCTCCGATTTCCTGTCCATTCTCCTCCATGATCCAAACTTTCCATCCTAGTTGATAGCAGTATTGCCATGGTCTATTTTTTCTTGTTAAAGACTAATGGCAAAGATGATGCTTTACCTTCTTCTCCTGCCATTGCTCCTCCTCACATGCATCTTTGCATCTTATGTTCATTCGATGGAATCAAGCACCTCCAAGTGCTCCAATATTCCCATCCCTTATCCCTTTGGTATTCTTGGTGGGAACCCTGCCCCAGCCCAAGGGTTTGAGATCACATGTGCCTCATCTGGCCCGATGGTACGCATTAACAATATCATGTTTGGGATTCTTAACATCTCGTTGCTGGATGGTTTTGTAAGCATCTTGGCCAGTGCCACTTCTCAGCAGTGCAAAAGGAATTCTAGCTTCAGCCTTGAGGGGACCAATTTCACGTTCTCAGATACAAGAAACAAATTTACAGCTCTGGGTTGTGATATGGTAGCCATGCTATTGAACGGTAGCAGCGGGTATAGCGGTGGCTGTGCTTCTTTTTGCTCCACCAAAAGCAATATAATTGATGGTATGTGCTCTGGCGTGGCTTGCTGCCAAGCACCAGTACCGAAGGGGTTAATGAAGCTTGAGTTGGAGTTCACTAACATAACTGGGCAGCTCAGCAGGCCCAAGGAGGTCAATAATACTCCAACATGTGGCGAGGCTTTCATCGTGGAGCAGAACTCCTATGTTTTCTCTAGTGTTGATCTGAGCAACACTAACAGGAACAATCCTCAATACCGCCCTGTTGTTCTTGAGTGGTCCATTGATGGTGGCTACTGTGAGGAGGCGAACCGCTTCATGTCATATGCCTGCAAGGAGAACTCCTACTGCTATAACTCATCAAATGGAATTGGATACCGCTGCAATTGCTCCCTTGGGTTTCAGGGGAACCCTTACTTGCAAGGGCCCGATGGATGCCAAGGTAACGAATACATTCATGCTAGTTACCTCAGCTTATGTTTCTTGAATTTAGTAGTCAGCAAGAATAGCTCATGCCTGATTTCGTCTGGTTTCATGTGATTTTTTTATAAGATATTGATGAATGCACCATTAAGAGGCCATGCACGCATAAGTGCATCAACACGAAAGGGAGTTTCTACTGCATGTGCCCAGCAGGGATGAGAGGTGATGGCTTGAAGGAGGGCAGTGGCTGCAATGGAATTGGCACACTGTTGATTGGAATAGGCAAGTTTCTGAAGCCCTGTATCACTGCCTTGCCATGTGAATGATGTAATCATTCAATTTGAAGGCTTGAGTTGATTAATGCTGCATCCAGTAGAGATCCCTGAATTTTCTGTGTCTGTGCAGTTACTGGACTAGCTCTGCTACTGCTTCTCCTTGTTCTCATATTCTGGACCCATTGGCTTGTTAATAAGAGAAAACTTGCGAAGATAAGACAGAGATACTTTATGCAGAATGGTGGAATGTTGCTGAAGCAGAAGATGTTTTCTCAAGGTGCACCACTGCGGATATTTACTTCTAGTGAACTTGAGAAAGCAACCAACAGCTTCAGTGATGACAATATCATTGGTCGAGGTGGATTTGGGATCGTGTACAAAGGTATATTATCCAATCAAATGGTTGTGGCAATCAAGAAGGCGCAGCGAGTTGATCAGAACCAAATGGAACAATTCATAAACGAGTTGGTCATTCTTTCACAAGTGAACCACAAGAATGTGGTCCAGCTATTAGGCTGTTGTCTTGAGACAGAACTTCCCTTGTTAGTTTATGAATTCATCACCAATGGGGCCCTTTTTTCTCATCTTCAAAATACATCTGTCCTGATTTCATGGGAGGACCGCCTAAGGATTGCAGTTGAAACTGCATCAGCACTTGCATACTTACACTTAGCTACAAAGGAACCAATTATTCACAGGGATGTCAAGTCATCAAACATACTCCTTGACGAGAACTTCACTGCAAAGGTGTCTGATTTTGGTGCCTCGAGGCCAATACCACACAACCAGACCCATGTGACAACTTTAGTGCAGGGGACATTGGGGTACATGGACCCTGAATATTTCCAAACAAGCCAGCTAACTGAGAAGAGTGATGTATACAGTTTTGGGGTGGTTCTTATCGAGCTATTGACAAGACAGAAACCTATATCTGATGGTAGGACAGATGATGTGAGAAATCTAGCATGTCATTTTAGTATGTTATTCTATCAGAACCAGTTGTTGGAAATTGTAGATTCTCAAGTAGCTGAGGAAGCTGGCACGAAACATGTTAAAACCGTTGCACAATTGGCTTTACGATGCTTAAGGTCGAGAGGTGAAGAGAGGCCAAGGATGATAGAGGTGGCAATTGAACTTGAAGCTCTGAGAAGGCTGATGAAACAACACTTGGTCCTGCAGACCGAAGAAGACCCTCTGCTCTGCGAATCAGGTCAGCATGCAGATGTAAACATCGAAGCATCCTCCGAGTTTGAGCCTTGATAACATTACCAAGGAGGAGGAAAGCATGGACACCATTCTACTCCCATTCAGGGCCCTCTCATGTTAGTCCTCCCAGCACAAATGGTTTTCCCTTAGTTATTATAACTCAGTCCCCAGTTTCATGACAATGATTTTCTGTGTTGCTCTGAGCTGCCAATCATGTAGAAACCCAGAGACGGGTATACTAGGAATAATTGGAGAGTGTTGTCGAACTCCAATGTCTGTTCAACTATTTCTCAGAAAGAAATATCTGATCCTTTCAGAAGTCAATTTGGTCTTAACATGGTGGTTAAAGTAATTCATTTGGAATGTACCAAACTTTATAAAGAAATGATAGGTTAGTTT]
consensusID : consensus_1370#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 2620 fasta sequence
[TAACGTGCCCAAGTGGTTCCTCAGGTTGTGAGCCTGTGACCTATTTAACCTCCGATTTCCAGTCCATTCTCCTCCATGATCCAAACTTTCCATCCTAGTTGATAGCAGTATTGCCATGGTCTATTTTTTCTTGTTAAAGACTAATGGCAAAGATGATGCTTTACCTTCTTCTCCTGCCATTGCTCCTCCTCACATGCATCTTTGCATCTTATGTTCATTCGATGGAATCAAGCACCTCCAAGTGCTCCAATATTCCCATCCCTTATCCCTTTGGTATTCTTGGTGGGAACCCTGCCCCAGCCCAAGGGTTTGAGATCACATGTGCCTCATCTGGCCCGATGGTACGCATTAACAATATCATGTTTGGGATTCTTAACATCTCGTTGCTGGATGGTTTTGTAAGCATCTTGGCCAGTGCCACTTCTCAGCAGTGCAAAAGGAATTCTAGCTTCAGCCTTGAGGGGACCAATTTCACGTTCTCAGATACAAGAAACAAATTTACAGCTCTGGGTTGTGATATGGTAGCCATGCTATTGAACGGTAGCAGCGGGTATAGCGGTGGCTGTGCTTCTTTTTGCTCCACCAAAAGCAATATAATTGATGGTATGTGCTCTGGCGTGGCTTGCTGCCAAGCACCAGTACCGAAGGGGTTAAAGAAGCTTGAGTTGGAGTTCACTAACATAACTGGGCAGCTCAGCAGGCCCAAGGAGGTCAATAATACTCCAACATGTGGCGAGGCTTTCATCGTGGAGCAGAACTCCTATGTTTTCTCTAGTGTTGATCTGAGCAACACTAACAGGAACAATCCTCAATACCGCCCTGTTGTTCTTGAGTGGTCCATTGATGGTGGCTACTGTGAGGAGGCGAACCGCTTCATGTCATATGCCTGCAAGGAGAACTCCTACTGCTATAACTCATCAAATGGAATTGGATACCGCTGCAATTGCTCCCTTGGGTTTCAGGGGAACCCTTACTTGCAAGGGCCCGATGGATGCCAAGATATTGATGAATGCACCATTAAGAGGCCATGCACGCATAAGTGCATCAACACGAAAGGGAGTTTCTACTGCATGTGCCCAGCAGGGATGAGAGGTGATGGCTTGAAGGAGGGCAGTGGCTGCAATGGAATTGGCACACTGTTGATTGGAATAGTTACTGGACTAGCTCTGCTACTGCTTCTCCTTGTTCTCATATTCTGGACCCATTGGCTTGTTAAGAAGAGAAAACTTGCGAAGATAAGACAGAGATACTTTATGCAGAATGGTGGAATGTTGCTGAAGCAGAAGATGTTTTCTCAAGGTGCACCACTGCGGATATTTACTTCTAGTGAACTTGAGAAAGCAACCAACAGCTTCAGTGATGACAATATCATTGGTCGAGGTGGATTTGGGATCGTGTACAAAGGTATATTATCCAATCAAATGGTTGTGGCAATCAAGAAGGCGCAGCGAGTTGATCAGAACCAAATGGAACAATTCATAAACGAGTTGGTCATTCTTTCACAAGTGAACCACAAGAATGTGGTCCAGCTATTAGGCTGTTGTCTTGAGACAGAACTTCCCTTGTTAGTTTATGAATTCATCACCAATGGGGCCCTTTTTTCTCATCTTCAAAATACATCTGTCCTGATTTCATGGGAGGACCGCCTAAGGATTGCAGTTGAAACTGCATCAGCACTTGCATACTTACACTTAGCTACAAAGGAACCAATTATTCACAGGGATGTCAAGTCATCAAACATACTCCTTGACGAGAACTTCACTGCAAAGGTGTCTGATTTTGGTGCCTCGAGGCCAATACCACACAACCAGACCCATGTGACAACTTTAGTGCAGGGGACATTGGGGTACATGGACCCTGAATATTTCCAAACAAGCCAGCTAACTGAGAAGAGTGATGTATACAGTTTTGGGGTGGTTCTTATCGAGCTATTGACAAGACAGAAACCTATATCTGATGGTAGGACAGATGATGTGAGAAATCTAGCATGTCATTTTAGTATGTTATTCTATCAGAACCAGTTGTTGGAAATTGTAGATTCTCAAGTAGCTGAGGAAGCTGGCACGAAACATGTTAAAACCGTTGCACAATTGGCTTTACGATGCTTAAGGTCGAGAGGTGAAGAGAGGCCAAGGATGATAGAGGTGGCAATTGAACTTGAAGCTCTGAGAAGGCTGATGAAACAACACTTGGTCCTGCAGACCGAAGAAGACCCTCTGCTCTGCGAATCAGGTCAGCATGCAGATGTAAACATCGAAGCATCCTCCGAGTTTGAGCCTTGATAACATTACCAAGGAGGAGGAAAGCATGGACACCATTCTACTCCCATTCAGGGCCCTCTCATGTTAGTCCTCCCAGCACAAATGGTTTTCCCTTAGTTATTATAACTCAGTCCCCAGTTTCATGACAATGATTTTCTGTGTTGCTCTGAGCTGCCAATCATGTAGAAACCCAGAGACGGGTATACTAGGAATAATTGGAGAGTGTTGTCGAACTCCAATGTCTGTTCAACTATTTCTCAGAGAGAAATATCTGATCCTTTCAGAAGTCAATTTGGTCTTAACATGGTGGTTAAAGTAATTCATTTGGAATGTACCAAACTTTATAAAGAAATGATAGG]
[+] EMBL AK111508 [TAACGTGCCCAAGTGGTTCCTCAGGTTGTGAGCCTGTGACCTATTTAACCTCCGATTTCCAGTCCATTCTCCTCCATGATCCAAACTTTCCATCCTAGTTGATAGCAGTATTGCCATGGTCTATTTTTTCTTGTTAAAGACTAATGGCAAAGATGATGCTTTACCTTCTTCTCCTGCCATTGCTCCTCCTCACATGCATCTTTGCATCTTATGTTCATTCGATGGAATCAAGCACCTCCAAGTGCTCCAATATTCCCATCCCTTATCCCTTTGGTATTCTTGGTGGGAACCCTGCCCCAGCCCAAGGGTTTGAGATCACATGTGCCTCATCTGGCCCGATGGTACGCATTAACAATATCATGTTTGGGATTCTTAACATCTCGTTGCTGGATGGTTTTGTAAGCATCTTGGCCAGTGCCACTTCTCAGCAGTGCAAAAGGAATTCTAGCTTCAGCCTTGAGGGGACCAATTTCACGTTCTCAGATACAAGAAACAAATTTACAGCTCTGGGTTGTGATATGGTAGCCATGCTATTGAACGGTAGCAGCGGGTATAGCGGTGGCTGTGCTTCTTTTTGCTCCACCAAAAGCAATATAATTGATGGTATGTGCTCTGGCGTGGCTTGCTGCCAAGCACCAGTACCGAAGGGGTTAAAGAAGCTTGAGTTGGAGTTCACTAACATAACTGGGCAGCTCAGCAGGCCCAAGGAGGTCAATAATACTCCAACATGTGGCGAGGCTTTCATCGTGGAGCAGAACTCCTATGTTTTCTCTAGTGTTGATCTGAGCAACACTAACAGGAACAATCCTCAATACCGCCCTGTTGTTCTTGAGTGGTCCATTGATGGTGGCTACTGTGAGGAGGCGAACCGCTTCATGTCATATGCCTGCAAGGAGAACTCCTACTGCTATAACTCATCAAATGGAATTGGATACCGCTGCAATTGCTCCCTTGGGTTTCAGGGGAACCCTTACTTGCAAGGGCCCGATGGATGCCAAGATATTGATGAATGCACCATTAAGAGGCCATGCACGCATAAGTGCATCAACACGAAAGGGAGTTTCTACTGCATGTGCCCAGCAGGGATGAGAGGTGATGGCTTGAAGGAGGGCAGTGGCTGCAATGGAATTGGCACACTGTTGATTGGAATAGTTACTGGACTAGCTCTGCTACTGCTTCTCCTTGTTCTCATATTCTGGACCCATTGGCTTGTTAAGAAGAGAAAACTTGCGAAGATAAGACAGAGATACTTTATGCAGAATGGTGGAATGTTGCTGAAGCAGAAGATGTTTTCTCAAGGTGCACCACTGCGGATATTTACTTCTAGTGAACTTGAGAAAGCAACCAACAGCTTCAGTGATGACAATATCATTGGTCGAGGTGGATTTGGGATCGTGTACAAAGGTATATTATCCAATCAAATGGTTGTGGCAATCAAGAAGGCGCAGCGAGTTGATCAGAACCAAATGGAACAATTCATAAACGAGTTGGTCATTCTTTCACAAGTGAACCACAAGAATGTGGTCCAGCTATTAGGCTGTTGTCTTGAGACAGAACTTCCCTTGTTAGTTTATGAATTCATCACCAATGGGGCCCTTTTTTCTCATCTTCAAAATACATCTGTCCTGATTTCATGGGAGGACCGCCTAAGGATTGCAGTTGAAACTGCATCAGCACTTGCATACTTACACTTAGCTACAAAGGAACCAATTATTCACAGGGATGTCAAGTCATCAAACATACTCCTTGACGAGAACTTCACTGCAAAGGTGTCTGATTTTGGTGCCTCGAGGCCAATACCACACAACCAGACCCATGTGACAACTTTAGTGCAGGGGACATTGGGGTACATGGACCCTGAATATTTCCAAACAAGCCAGCTAACTGAGAAGAGTGATGTATACAGTTTTGGGGTGGTTCTTATCGAGCTATTGACAAGACAGAAACCTATATCTGATGGTAGGACAGATGATGTGAGAAATCTAGCATGTCATTTTAGTATGTTATTCTATCAGAACCAGTTGTTGGAAATTGTAGATTCTCAAGTAGCTGAGGAAGCTGGCACGAAACATGTTAAAACCGTTGCACAATTGGCTTTACGATGCTTAAGGTCGAGAGGTGAAGAGAGGCCAAGGATGATAGAGGTGGCAATTGAACTTGAAGCTCTGAGAAGGCTGATGAAACAACACTTGGTCCTGCAGACCGAAGAAGACCCTCTGCTCTGCGAATCAGGTCAGCATGCAGATGTAAACATCGAAGCATCCTCCGAGTTTGAGCCTTGATAACATTACCAAGGAGGAGGAAAGCATGGACACCATTCTACTCCCATTCAGGGCCCTCTCATGTTAGTCCTCCCAGCACAAATGGTTTTCCCTTAGTTATTATAACTCAGTCCCCAGTTTCATGACAATGATTTTCTGTGTTGCTCTGAGCTGCCAATCATGTAGAAACCCAGAGACGGGTATACTAGGAATAATTGGAGAGTGTTGTCGAACTCCAATGTCTGTTCAACTATTTCTCAGAGAGAAATATCTGATCCTTTCAGAAGTCAATTTGGTCTTAACATGGTGGTTAAAGTAATTCATTTGGAATGTACCAAACTTTATAAAGAAATGATAGG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_1370#0 TTTTCAAGCTATCCCCTATGGCCCTATCCCCCTCTCTCCTCCTCCGGCCCACACACCATT 60
consensus_1370#1 ------------------------------------------------------------
consensus_1370#0 GCCGCATCATCCACCACCGCCTCCTCAGCCGCAGGTGAAAGCGGCCGCCATCCCAGCCCC 120
consensus_1370#1 ------------------------------------------------------------
consensus_1370#0 AGCCCCCCTCCCCCCCCCCCTCTCTCTCTCTCTCCTCGCCATCGCCGCCGAGAGGGGCTT 180
consensus_1370#1 ------------------------------------------------------------
consensus_1370#0 ATTCGATGCCGGATGGGGGAGCGCCGGGCGCCGGCCAGGCGGGCGGGGTCGGAGGCGACG 240
consensus_1370#1 ------------------------------------------------------------
consensus_1370#0 AGGGAGCGGGTAATCAATCTCCCTACGGCCCTGAACTGCAGGTGGTTGGCGGGCTCCGCC 300
consensus_1370#1 ------------------------------------------------------------
consensus_1370#0 TCCCGCGAGTTGAGGCCGATGAGGTGACGTGCAGAAGCTGTGGCCGTGCTGGAGTTGCTG 360
consensus_1370#1 ------------------------------------------------------------
consensus_1370#0 TGTCTGACGCTGACGGCAAGGTAAGGATAGTTCAGTCTATACAAAAAGACAATTAGCCCG 420
consensus_1370#1 ------------------------------------------------------------
consensus_1370#0 CGTATAAGATGGAAAATTTAGCGCTCGATGCTTCGATTGGTAGGCAGCCTTGAGATTGTA 480
consensus_1370#1 ------------------------------------------------------------
consensus_1370#0 AACAGATGGCCATTGTCTGTTGTGTCAGCTAGTAAAATTTAGTTAAGACTTAAGCTTATT 540
consensus_1370#1 ------------------------------------------------------------
consensus_1370#0 CATGTTTTCATCAGTCTGAAACCAAACATTTCTGTTTAACGTCAACCCGGCTGTTTTCGC 600
consensus_1370#1 ------------------------------------------------------------
consensus_1370#0 CCGGTCAAAAAATATGATATATTCATATTCATTGTGAGCCCATGCACCTGGGGAAGAGAG 660
consensus_1370#1 ------------------------------------------------------------
consensus_1370#0 TGCTTGCGATCATATGTCTCCATCTTAGCTGAAAGATGCTTGCAGCAAGTCTACCGTTGA 720
consensus_1370#1 ------------------------------------------------------------
consensus_1370#0 GTCAAGGGCAATATGACAACAACAGTAAAAGGGATAAGCCAGAAAAATTGCTTGTTAGCT 780
consensus_1370#1 ------------------------------------------------------------
consensus_1370#0 TTTTCCTGCCATTCCTTGCACCTTCCCCTTGAATATTTTGAGTAACGTGCCCAAGTGGTT 840
consensus_1370#1 ------------------------------------------TAACGTGCCCAAGTGGTT 18
******************
consensus_1370#0 CCTCAGGTTGTGAGCCTGTGACCTATTTAACCTCCGATTTCCTGTCCATTCTCCTCCATG 900
consensus_1370#1 CCTCAGGTTGTGAGCCTGTGACCTATTTAACCTCCGATTTCCAGTCCATTCTCCTCCATG 78
****************************************** *****************
consensus_1370#0 ATCCAAACTTTCCATCCTAGTTGATAGCAGTATTGCCATGGTCTATTTTTTCTTGTTAAA 960
consensus_1370#1 ATCCAAACTTTCCATCCTAGTTGATAGCAGTATTGCCATGGTCTATTTTTTCTTGTTAAA 138
************************************************************
consensus_1370#0 GACTAATGGCAAAGATGATGCTTTACCTTCTTCTCCTGCCATTGCTCCTCCTCACATGCA 1020
consensus_1370#1 GACTAATGGCAAAGATGATGCTTTACCTTCTTCTCCTGCCATTGCTCCTCCTCACATGCA 198
************************************************************
consensus_1370#0 TCTTTGCATCTTATGTTCATTCGATGGAATCAAGCACCTCCAAGTGCTCCAATATTCCCA 1080
consensus_1370#1 TCTTTGCATCTTATGTTCATTCGATGGAATCAAGCACCTCCAAGTGCTCCAATATTCCCA 258
************************************************************
consensus_1370#0 TCCCTTATCCCTTTGGTATTCTTGGTGGGAACCCTGCCCCAGCCCAAGGGTTTGAGATCA 1140
consensus_1370#1 TCCCTTATCCCTTTGGTATTCTTGGTGGGAACCCTGCCCCAGCCCAAGGGTTTGAGATCA 318
************************************************************
consensus_1370#0 CATGTGCCTCATCTGGCCCGATGGTACGCATTAACAATATCATGTTTGGGATTCTTAACA 1200
consensus_1370#1 CATGTGCCTCATCTGGCCCGATGGTACGCATTAACAATATCATGTTTGGGATTCTTAACA 378
************************************************************
consensus_1370#0 TCTCGTTGCTGGATGGTTTTGTAAGCATCTTGGCCAGTGCCACTTCTCAGCAGTGCAAAA 1260
consensus_1370#1 TCTCGTTGCTGGATGGTTTTGTAAGCATCTTGGCCAGTGCCACTTCTCAGCAGTGCAAAA 438
************************************************************
consensus_1370#0 GGAATTCTAGCTTCAGCCTTGAGGGGACCAATTTCACGTTCTCAGATACAAGAAACAAAT 1320
consensus_1370#1 GGAATTCTAGCTTCAGCCTTGAGGGGACCAATTTCACGTTCTCAGATACAAGAAACAAAT 498
************************************************************
consensus_1370#0 TTACAGCTCTGGGTTGTGATATGGTAGCCATGCTATTGAACGGTAGCAGCGGGTATAGCG 1380
consensus_1370#1 TTACAGCTCTGGGTTGTGATATGGTAGCCATGCTATTGAACGGTAGCAGCGGGTATAGCG 558
************************************************************
consensus_1370#0 GTGGCTGTGCTTCTTTTTGCTCCACCAAAAGCAATATAATTGATGGTATGTGCTCTGGCG 1440
consensus_1370#1 GTGGCTGTGCTTCTTTTTGCTCCACCAAAAGCAATATAATTGATGGTATGTGCTCTGGCG 618
************************************************************
consensus_1370#0 TGGCTTGCTGCCAAGCACCAGTACCGAAGGGGTTAATGAAGCTTGAGTTGGAGTTCACTA 1500
consensus_1370#1 TGGCTTGCTGCCAAGCACCAGTACCGAAGGGGTTAAAGAAGCTTGAGTTGGAGTTCACTA 678
************************************ ***********************
consensus_1370#0 ACATAACTGGGCAGCTCAGCAGGCCCAAGGAGGTCAATAATACTCCAACATGTGGCGAGG 1560
consensus_1370#1 ACATAACTGGGCAGCTCAGCAGGCCCAAGGAGGTCAATAATACTCCAACATGTGGCGAGG 738
************************************************************
consensus_1370#0 CTTTCATCGTGGAGCAGAACTCCTATGTTTTCTCTAGTGTTGATCTGAGCAACACTAACA 1620
consensus_1370#1 CTTTCATCGTGGAGCAGAACTCCTATGTTTTCTCTAGTGTTGATCTGAGCAACACTAACA 798
************************************************************
consensus_1370#0 GGAACAATCCTCAATACCGCCCTGTTGTTCTTGAGTGGTCCATTGATGGTGGCTACTGTG 1680
consensus_1370#1 GGAACAATCCTCAATACCGCCCTGTTGTTCTTGAGTGGTCCATTGATGGTGGCTACTGTG 858
************************************************************
consensus_1370#0 AGGAGGCGAACCGCTTCATGTCATATGCCTGCAAGGAGAACTCCTACTGCTATAACTCAT 1740
consensus_1370#1 AGGAGGCGAACCGCTTCATGTCATATGCCTGCAAGGAGAACTCCTACTGCTATAACTCAT 918
************************************************************
consensus_1370#0 CAAATGGAATTGGATACCGCTGCAATTGCTCCCTTGGGTTTCAGGGGAACCCTTACTTGC 1800
consensus_1370#1 CAAATGGAATTGGATACCGCTGCAATTGCTCCCTTGGGTTTCAGGGGAACCCTTACTTGC 978
************************************************************
consensus_1370#0 AAGGGCCCGATGGATGCCAAGGTAACGAATACATTCATGCTAGTTACCTCAGCTTATGTT 1860
consensus_1370#1 AAGGGCCCGATGGATGCCAAG--------------------------------------- 999
*********************
consensus_1370#0 TCTTGAATTTAGTAGTCAGCAAGAATAGCTCATGCCTGATTTCGTCTGGTTTCATGTGAT 1920
consensus_1370#1 ------------------------------------------------------------
consensus_1370#0 TTTTTTATAAGATATTGATGAATGCACCATTAAGAGGCCATGCACGCATAAGTGCATCAA 1980
consensus_1370#1 -----------ATATTGATGAATGCACCATTAAGAGGCCATGCACGCATAAGTGCATCAA 1048
*************************************************
consensus_1370#0 CACGAAAGGGAGTTTCTACTGCATGTGCCCAGCAGGGATGAGAGGTGATGGCTTGAAGGA 2040
consensus_1370#1 CACGAAAGGGAGTTTCTACTGCATGTGCCCAGCAGGGATGAGAGGTGATGGCTTGAAGGA 1108
************************************************************
consensus_1370#0 GGGCAGTGGCTGCAATGGAATTGGCACACTGTTGATTGGAATAGGCAAGTTTCTGAAGCC 2100
consensus_1370#1 GGGCAGTGGCTGCAATGGAATTGGCACACTGTTGATTGGAATAG---------------- 1152
********************************************
consensus_1370#0 CTGTATCACTGCCTTGCCATGTGAATGATGTAATCATTCAATTTGAAGGCTTGAGTTGAT 2160
consensus_1370#1 ------------------------------------------------------------
consensus_1370#0 TAATGCTGCATCCAGTAGAGATCCCTGAATTTTCTGTGTCTGTGCAGTTACTGGACTAGC 2220
consensus_1370#1 -----------------------------------------------TTACTGGACTAGC 1165
*************
consensus_1370#0 TCTGCTACTGCTTCTCCTTGTTCTCATATTCTGGACCCATTGGCTTGTTAATAAGAGAAA 2280
consensus_1370#1 TCTGCTACTGCTTCTCCTTGTTCTCATATTCTGGACCCATTGGCTTGTTAAGAAGAGAAA 1225
*************************************************** ********
consensus_1370#0 ACTTGCGAAGATAAGACAGAGATACTTTATGCAGAATGGTGGAATGTTGCTGAAGCAGAA 2340
consensus_1370#1 ACTTGCGAAGATAAGACAGAGATACTTTATGCAGAATGGTGGAATGTTGCTGAAGCAGAA 1285
************************************************************
consensus_1370#0 GATGTTTTCTCAAGGTGCACCACTGCGGATATTTACTTCTAGTGAACTTGAGAAAGCAAC 2400
consensus_1370#1 GATGTTTTCTCAAGGTGCACCACTGCGGATATTTACTTCTAGTGAACTTGAGAAAGCAAC 1345
************************************************************
consensus_1370#0 CAACAGCTTCAGTGATGACAATATCATTGGTCGAGGTGGATTTGGGATCGTGTACAAAGG 2460
consensus_1370#1 CAACAGCTTCAGTGATGACAATATCATTGGTCGAGGTGGATTTGGGATCGTGTACAAAGG 1405
************************************************************
consensus_1370#0 TATATTATCCAATCAAATGGTTGTGGCAATCAAGAAGGCGCAGCGAGTTGATCAGAACCA 2520
consensus_1370#1 TATATTATCCAATCAAATGGTTGTGGCAATCAAGAAGGCGCAGCGAGTTGATCAGAACCA 1465
************************************************************
consensus_1370#0 AATGGAACAATTCATAAACGAGTTGGTCATTCTTTCACAAGTGAACCACAAGAATGTGGT 2580
consensus_1370#1 AATGGAACAATTCATAAACGAGTTGGTCATTCTTTCACAAGTGAACCACAAGAATGTGGT 1525
************************************************************
consensus_1370#0 CCAGCTATTAGGCTGTTGTCTTGAGACAGAACTTCCCTTGTTAGTTTATGAATTCATCAC 2640
consensus_1370#1 CCAGCTATTAGGCTGTTGTCTTGAGACAGAACTTCCCTTGTTAGTTTATGAATTCATCAC 1585
************************************************************
consensus_1370#0 CAATGGGGCCCTTTTTTCTCATCTTCAAAATACATCTGTCCTGATTTCATGGGAGGACCG 2700
consensus_1370#1 CAATGGGGCCCTTTTTTCTCATCTTCAAAATACATCTGTCCTGATTTCATGGGAGGACCG 1645
************************************************************
consensus_1370#0 CCTAAGGATTGCAGTTGAAACTGCATCAGCACTTGCATACTTACACTTAGCTACAAAGGA 2760
consensus_1370#1 CCTAAGGATTGCAGTTGAAACTGCATCAGCACTTGCATACTTACACTTAGCTACAAAGGA 1705
************************************************************
consensus_1370#0 ACCAATTATTCACAGGGATGTCAAGTCATCAAACATACTCCTTGACGAGAACTTCACTGC 2820
consensus_1370#1 ACCAATTATTCACAGGGATGTCAAGTCATCAAACATACTCCTTGACGAGAACTTCACTGC 1765
************************************************************
consensus_1370#0 AAAGGTGTCTGATTTTGGTGCCTCGAGGCCAATACCACACAACCAGACCCATGTGACAAC 2880
consensus_1370#1 AAAGGTGTCTGATTTTGGTGCCTCGAGGCCAATACCACACAACCAGACCCATGTGACAAC 1825
************************************************************
consensus_1370#0 TTTAGTGCAGGGGACATTGGGGTACATGGACCCTGAATATTTCCAAACAAGCCAGCTAAC 2940
consensus_1370#1 TTTAGTGCAGGGGACATTGGGGTACATGGACCCTGAATATTTCCAAACAAGCCAGCTAAC 1885
************************************************************
consensus_1370#0 TGAGAAGAGTGATGTATACAGTTTTGGGGTGGTTCTTATCGAGCTATTGACAAGACAGAA 3000
consensus_1370#1 TGAGAAGAGTGATGTATACAGTTTTGGGGTGGTTCTTATCGAGCTATTGACAAGACAGAA 1945
************************************************************
consensus_1370#0 ACCTATATCTGATGGTAGGACAGATGATGTGAGAAATCTAGCATGTCATTTTAGTATGTT 3060
consensus_1370#1 ACCTATATCTGATGGTAGGACAGATGATGTGAGAAATCTAGCATGTCATTTTAGTATGTT 2005
************************************************************
consensus_1370#0 ATTCTATCAGAACCAGTTGTTGGAAATTGTAGATTCTCAAGTAGCTGAGGAAGCTGGCAC 3120
consensus_1370#1 ATTCTATCAGAACCAGTTGTTGGAAATTGTAGATTCTCAAGTAGCTGAGGAAGCTGGCAC 2065
************************************************************
consensus_1370#0 GAAACATGTTAAAACCGTTGCACAATTGGCTTTACGATGCTTAAGGTCGAGAGGTGAAGA 3180
consensus_1370#1 GAAACATGTTAAAACCGTTGCACAATTGGCTTTACGATGCTTAAGGTCGAGAGGTGAAGA 2125
************************************************************
consensus_1370#0 GAGGCCAAGGATGATAGAGGTGGCAATTGAACTTGAAGCTCTGAGAAGGCTGATGAAACA 3240
consensus_1370#1 GAGGCCAAGGATGATAGAGGTGGCAATTGAACTTGAAGCTCTGAGAAGGCTGATGAAACA 2185
************************************************************
consensus_1370#0 ACACTTGGTCCTGCAGACCGAAGAAGACCCTCTGCTCTGCGAATCAGGTCAGCATGCAGA 3300
consensus_1370#1 ACACTTGGTCCTGCAGACCGAAGAAGACCCTCTGCTCTGCGAATCAGGTCAGCATGCAGA 2245
************************************************************
consensus_1370#0 TGTAAACATCGAAGCATCCTCCGAGTTTGAGCCTTGATAACATTACCAAGGAGGAGGAAA 3360
consensus_1370#1 TGTAAACATCGAAGCATCCTCCGAGTTTGAGCCTTGATAACATTACCAAGGAGGAGGAAA 2305
************************************************************
consensus_1370#0 GCATGGACACCATTCTACTCCCATTCAGGGCCCTCTCATGTTAGTCCTCCCAGCACAAAT 3420
consensus_1370#1 GCATGGACACCATTCTACTCCCATTCAGGGCCCTCTCATGTTAGTCCTCCCAGCACAAAT 2365
************************************************************
consensus_1370#0 GGTTTTCCCTTAGTTATTATAACTCAGTCCCCAGTTTCATGACAATGATTTTCTGTGTTG 3480
consensus_1370#1 GGTTTTCCCTTAGTTATTATAACTCAGTCCCCAGTTTCATGACAATGATTTTCTGTGTTG 2425
************************************************************
consensus_1370#0 CTCTGAGCTGCCAATCATGTAGAAACCCAGAGACGGGTATACTAGGAATAATTGGAGAGT 3540
consensus_1370#1 CTCTGAGCTGCCAATCATGTAGAAACCCAGAGACGGGTATACTAGGAATAATTGGAGAGT 2485
************************************************************
consensus_1370#0 GTTGTCGAACTCCAATGTCTGTTCAACTATTTCTCAGAAAGAAATATCTGATCCTTTCAG 3600
consensus_1370#1 GTTGTCGAACTCCAATGTCTGTTCAACTATTTCTCAGAGAGAAATATCTGATCCTTTCAG 2545
************************************** *********************
consensus_1370#0 AAGTCAATTTGGTCTTAACATGGTGGTTAAAGTAATTCATTTGGAATGTACCAAACTTTA 3660
consensus_1370#1 AAGTCAATTTGGTCTTAACATGGTGGTTAAAGTAATTCATTTGGAATGTACCAAACTTTA 2605
************************************************************
consensus_1370#0 TAAAGAAATGATAGGTTAGTTT 3682
consensus_1370#1 TAAAGAAATGATAGG------- 2620
***************
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||