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Oryza sativa
cluster # 1371 cluster # 1371       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1371#0 length = 1292 sequences # 2  

consensusID : consensus_1371#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1292
fasta sequence
                              [ACATTCATACCAATTAATGTTTAGTTTCTAACATGCATCTAGCCTAGCATTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAAAGCACATTGCAAACACAGGCTTAGCTTGCATATATACATTTTTTTGTRGCCATGGCTATGCATCATATGCATGACKGTTTTTGCACAGACGACGAGCATCATCGGCCATGAAGAAGAAGAAGTAACCBATTGACCCGGACCAAGTGGGGCGCATGGGCTCAATCGTGGCCACCGTYTCTGGGCAATCCAATGTCGGAGGAWTTTCTGGAAACACGTCTACAAGGTGCAGCGGTGCCCGCVGGTCGTCCAGCCACGACTGGACGTCGTGCCCCTACGCGCACAAGGGCGAGCGCGCGCGGCGGCGCGACACGCGGCGCTTCGCGTACGCCGCCGTGTCGTGCCCGGACTACCGCCCGCGCGAGGCGGCGCCGGGCGCCGTGCCCAGCTGCGCCCACGGCCTCCGTTGCCGCTACGCCCATGGTGTCTTCGAGCTATGGCTGCACCCGTCCCGCTTCCGCACGCGCATGTGCTCCGCCGGCACGCGGTGCCCTCGCCGGATCTGCTTCTTTGCCCACTCCGCCGCCGAGCTTAGGGACGATCCCAACTCCATTGCGTCAGCCATCCTCACACCGATGCCAATGCCGATGCCGATGTCGATACCGATGCGGACTCCTGATGCTGATCATCATCCCAGGGTTTCTGCTATGCGTGATCAGCTTGATCTAATCGAAGAGGCCATGAGAAATAGGCTTCGCTTGTATTCTAATGCTAATGCTAATGCTAATGTTGGTTCTTCTTCTGCTACCGCTGTTGCTACCACCACCATACCGGTGTCAACATTGGCAAATGGTGAGGGTTCAACTGGAAAAAGGTGTGGTTGCCGCCGTTGTGTGGAGGAGGAAGACGCTTTGCTCAATGGCTACCCACATTATGATCTCATCATGGACTTGGTGGATGGATAGATGGGTGTGTTACATACTCTTTTGCGATGCATTTGAAGGAGATGACACAAGCTCGCAAATTGCCAAAATGGAGAAACTTGAGCGATTTGGGATGCTTTAAAAGTTGACACCCTATACATATGGTGCTGGATCATGTATCATATTTATGCCAATTTTTACTAGAAAAGTGTATGCGTGTGCATGCATATATAAAAATATTTATGATATTGTCGTCGGGCTAGCTCCGAGCCTATATATCAAGTGGTATCA]

[+] EMBL AA752523             [ACATTCATACCAATTAATGTTTAGTTTCTAACATGCATCTAGCCTAGCATTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAAAGCACATTGCAAACACAGGCTTAGCTTGCATATATACATTTTTTTGTRGCCATGGCTATGCATCATATGCATGACKGTTTTTGCACAGACGACGAGCATCATCGGCCATGAAGAAGAAGAAGTAACCBATTGACCCGGACCAAGTGGGGCGCATGGGCTCAATCGTGGCCACCGTYTCTGGGCAATCCAATGTCGGAGGAWTTTCTGGAAACACGTCTACAAGGTGCAGCGGTGCCCGCVGGTCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL AK108315             [                                                                             TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAAAGCACATTGCAAACACAGGCTTAGCTTGCATATATACATTTTTTTGTGGCCATGGCTATGCATCATATGCATGA TGTTTTTGCACAGACGACGAGCATCATCGGCCATGAAGAAGAAGAAGTAACC ATTGACCC GACCAAGTGGGGCGCATGGGCTC ATCGTGGCCACCGTCTCTGGGC ATCC ATGTCGGAGGA TTTCTGGATACACGTCTACAAGGTGCAGCGGTGCCCGC GGTCGTCCAGCCACGACTGGACGTCGTGCCCCTACGCGCACAAGGGCGAGCGCGCGCGGCGGCGCGACACGCGGCGCTTCGCGTACGCCGCCGTGTCGTGCCCGGACTACCGCCCGCGCGAGGCGGCGCCGGGCGCCGTGCCCAGCTGCGCCCACGGCCTCCGTTGCCGCTACGCCCATGGTGTCTTCGAGCTATGGCTGCACCCGTCCCGCTTCCGCACGCGCATGTGCTCCGCCGGCACGCGGTGCCCTCGCCGGATCTGCTTCTTTGCCCACTCCGCCGCCGAGCTTAGGGACGATCCCAACTCCATTGCGTCAGCCATCCTCACACCGATGCCAATGCCGATGCCGATGTCGATACCGATGCGGACTCCTGATGCTGATCATCATCCCAGGGTTTCTGCTATGCGTGATCAGCTTGATCTAATCGAAGAGGCCATGAGAAATAGGCTTCGCTTGTATTCTAATGCTAATGCTAATGCTAATGTTGGTTCTTCTTCTGCTACCGCTGTTGCTACCACCACCATACCGGTGTCAACATTGGCAAATGGTGAGGGTTCAACTGGAAAAAGGTGTGGTTGCCGCCGTTGTGTGGAGGAGGAAGACGCTTTGCTCAATGGCTACCCACATTATGATCTCATCATGGACTTGGTGGATGGATAGATGGGTGTGTTACATACTCTTTTGCGATGCATTTGAAGGAGATGACACAAGCTCGCAAATTGCCAAAATGGAGAAACTTGAGCGATTTGGGATGCTTTAAAAGTTGACACCCTATACATATGGTGCTGGATCATGTATCATATTTATGCCAATTTTTACTAGAAAAGTGTATGCGTGTGCATGCATATATAAAAATATTTATGATATTGTCGTCGGGCTAGCTCCGAGCCTATATATCAAGTGGTATCA]


>consensus_1371#0 ACATTCATACCAATTAATGTTTAGTTTCTAACATGCATCTAGCCTAGCATTTTTCTTCTT CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT CTTCTTCTTCTTCTTCTTCAAAGCACATTGCAAACACAGGCTTAGCTTGCATATATACAT TTTTTTGTRGCCATGGCTATGCATCATATGCATGACKGTTTTTGCACAGACGACGAGCAT CATCGGCCATGAAGAAGAAGAAGTAACCBATTGACCCGGACCAAGTGGGGCGCATGGGCT CAATCGTGGCCACCGTYTCTGGGCAATCCAATGTCGGAGGAWTTTCTGGAAACACGTCTA CAAGGTGCAGCGGTGCCCGCVGGTCGTCCAGCCACGACTGGACGTCGTGCCCCTACGCGC ACAAGGGCGAGCGCGCGCGGCGGCGCGACACGCGGCGCTTCGCGTACGCCGCCGTGTCGT GCCCGGACTACCGCCCGCGCGAGGCGGCGCCGGGCGCCGTGCCCAGCTGCGCCCACGGCC TCCGTTGCCGCTACGCCCATGGTGTCTTCGAGCTATGGCTGCACCCGTCCCGCTTCCGCA CGCGCATGTGCTCCGCCGGCACGCGGTGCCCTCGCCGGATCTGCTTCTTTGCCCACTCCG CCGCCGAGCTTAGGGACGATCCCAACTCCATTGCGTCAGCCATCCTCACACCGATGCCAA TGCCGATGCCGATGTCGATACCGATGCGGACTCCTGATGCTGATCATCATCCCAGGGTTT CTGCTATGCGTGATCAGCTTGATCTAATCGAAGAGGCCATGAGAAATAGGCTTCGCTTGT ATTCTAATGCTAATGCTAATGCTAATGTTGGTTCTTCTTCTGCTACCGCTGTTGCTACCA CCACCATACCGGTGTCAACATTGGCAAATGGTGAGGGTTCAACTGGAAAAAGGTGTGGTT GCCGCCGTTGTGTGGAGGAGGAAGACGCTTTGCTCAATGGCTACCCACATTATGATCTCA TCATGGACTTGGTGGATGGATAGATGGGTGTGTTACATACTCTTTTGCGATGCATTTGAA GGAGATGACACAAGCTCGCAAATTGCCAAAATGGAGAAACTTGAGCGATTTGGGATGCTT TAAAAGTTGACACCCTATACATATGGTGCTGGATCATGTATCATATTTATGCCAATTTTT ACTAGAAAAGTGTATGCGTGTGCATGCATATATAAAAATATTTATGATATTGTCGTCGGG CTAGCTCCGAGCCTATATATCAAGTGGTATCA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)