cluster # 13730

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Oryza sativa
cluster # 13730 cluster # 13730 Sequences # 14 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_13730#0 length = 1402 sequences # 6
consensus_13730#1 length = 619 sequences # 4

consensus_13730#2 length = 540 sequences # 3
consensus_13730#3 length = 431 sequences # 1

consensusID : consensus_13730#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1402
fasta sequence

                              [GACGACCTCGCTGCTCCTGGAGGCCACCCCGCGCCTCCTCTCGCTGCCGCCGCGGCGGCCTGTGCAGCCCCGTGGTGGCATCTTCCTCCTCAAGCCGCCGCCGCCGCCGCCTTTCCCCTCCCGCCGCGGGGTGGCAGTGGCGGTGGCACCGCCCCTCCGCGCCTCCCACCCGGACACGGCGCGCCGGGTGTCCGTGTCCCCCGCGGCGGTGGAGCCGCCGCCCAAGCCCCGCGCGCTGCTCGACGCGATCAAGAGGTCCCTCCTCGACTCGCTCGCGGCGCTCAAGAAGCCCGCGCTGGCGCTGCTCCTCGCCGGGGCGCTGCTCGCGGCAGCGGGGCCACACCACGGCGCCGCGCTGGCGGCATCGGGCGGCCGCGTCGGCGGGTCGGCGTTCTCGTCGCGGTCGTCGTCGCCGCCGTCGTCCTACGGGTACACCGCGCCGGCGCCGAGGGGCGGGTACTCGGNCGCGCCCTTCTACTCGCCCTCGCCGTTCGTGTCCGTCGGCCCGGCGGTCGGCATCGGGTTCGGGGGATCCAGCTTCTTTTTCGTCCTTATGGGGTTCGCCGCGTTCCTTTACCTCGCCGGGTTCCTCTCCGATTCCTCCGGCGGTAGCGTGCTCACCGAGACGGACAAGACCACCGTTCTCAAGCTGCAGGTTGGTTTGCTGGGCATGGCCAGATCATTTCAGAAAGAGCTTGATCAGATAGCTGAGAAGGCAGATACTTCTACCCCGGCAGGGCTGAGCTATGTGCTAACTGAGACAACATTGGCATTACTTCGGCATCCAGATTGCTGCATCTCAGCTTACTCATCAGTTGATGTGAAAAGAAGTATAGATGATGGGGAGAAACGTTTTAATCAACTATCAATTGAGGAAAGAGGCAAATTTGATGAAGAGACACTTGTGAATGTGAACAGCATCAAGAGGCAGAAAGCAGGCAGCCAAAGATCGAGCGGTTTTAGCAACGAGTACATTGTGATAACCATATTGGTTGCTGCTGAGGGTGTACATAAGCTACCCAGTATAAATGGCAGCGGTGACTTGAAGACAGCTCTACAGAAGCTTGGTGCCATACCATCAAGAAAAATACTGGCAGTTGAGGTACTATGGACTCCACAAAATGAGAATGACACATTGTCAGAACGAGAGCTGCTCGAAGATTACCCGCTTTTAAGACCCCTATGAAGGATGCATTTTAGATTCATTTTTGCCGTATTTCAGCTTATTAACTATAGCTCA-GGTTGTGTTGTAAAGAT-AGGTAAC-GTAAAAAAAATTGGCCTACATCATTCTCGCAACACAATTGTACGGTAGTCTTTCCTGACAGTCTTTGTAAATAGAATGCCGACACATAGTTGAATGCCAATTCTGCTCGGTGCATCCGCCTTCAGGGAAAAAAAAAGA]

[+] EMBL CB636266             [GACGACCTCGCTGCTCCTGGAGGCCACCCCGCGCCTCCTCTCGCTGCCGCCGCGGCGGCCTGTGCAGCCCCGTGGTGGCATCTTCCTCCTCAAGCCGCCGCCGCCGCCGCCTTTCCCCTCCCGCCGCGGGGTGGCAGTGGCGGTGGCACCGCCCCTCCGCGCCTCCCACCCGGACACGGCGCGCCGGGTGTCCGTGTCCCCCGCGGCGGTGGAGCCGCCGCCCAAGCCCCGCGCGCTGCTCGACGCGATCAAGAGGTCCCTCCTCGACTCGCTCGCGGCGCTCAAGAAGCCCGCGCTGGCGCTGCTCCTCGCCGGGGCGCTGCTCGCGGCAGCGGGGCCACACCACGGCGCCGCGCTGGCGGCATCGGGCGGCCGCGTCGGCGGGTCGGCGTTCTCGTCGCGGTCGTCGTCGCCGCCGTCGTCCTACGGGTACACCGCGCCGGCGCCGAGGGGCGGGTACTCGGNCGCGCCCTTCTACT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CB636320             [GACGACCTCGCTGCTCCTGGAGGCCACCCCGCGCCTCCTCTCGCTGCCGCCGCGGCGGCCTGTGCAGCCCCGTGGTGGCATCTTCCTCCTCAAGCCGCCGCCGCCGCCGCCTTTCCCCTCCCGCCGCGGGGTGGCAGTGGCGGTGGCACCGCCCCTCCGCGCCTCCCACCCGGACACGGCGCGCCGGGTGTCCGTGTCCCCCGCGGCGGTGGAGCCGCCGCCCAAGCCCCGCGCGCTGCTCGACGCGATCAAGAGGTCCCTCCTCGACTCGCTCGCGGCGCTCAAGAAGCCCGCGCTGGCGCTGCTCCTCGCCGGGGCGCTGCTCGCGGCAGCGGGGCCACACCACGGCGCCGCGCTGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CB660908             [                                                                                                                            CGCGGGGTGGCAGTGGCGGTGGCACCGCCCCTCCGCGCCTCCCACCCGGACACGGCGCGCCGGGTGTCCGTGTCCCCCGCGGCGGTGGAGCCGCCGCCCAAGCCCCGCGCGCTGCTCGACGCGATCAAGAGGTCCCTCCTCGACTCGCTCGCGGCGCTCAAGAAGCCCGCGCTGGCGCTGCTCCTCGCCGGGGCGCTGCTCGCGGCAGCGGGGCCACACCACGGCGCCGCGCTGGCGGCATCGGGCGGCCGCGTCGGCGGGTCGGCGTTCTCGTCGCGGTCGTCGTCGCCGCCGTCGTCCTACGGGTACACCGCGCCGGCGCCGAGGGGCGGGTACTCGGCCGCGCCCTTCTACTCGCCCTCGCCGTTCGTGTCCGTCGGCCCGGCGGTCGGCATCGGGTTCGGGGGATCCAGCTTCTTTTTCGTCCTTATGGGGTTCGCCGCGTTCCTTTACCTCGCCGGGTTCCTCTCCGATTCCTCCGGCGGTAGCGTGCTCACCGAGACGGACAAGACCACCGTTCTCAAGCTGCAGGTTGGTTTGCTGGGCATGGCCAGATCATTTCAGAAAGAGCTTGATCAGATAGCTGAGAAGGCAGATACTTCTACCCCGGCAGGGCTGAGCTATGTGCTAACTGAGACAACATTGGCATTACTTCGGCATCCAGATTGCTGCATCTCAGCTTACTCATCAGTTGATGTGAAAAGAAGTATAGATGATGGGGAGAAACGTTTTAATCAACTATCAATTGAGGAAAGAGGCAAATTTGATGAAGAGACACTTGTGAATGTGAACAGCATCAAGAGGCAGAAAGCAGGCAGCCAAAGATCGAGCGGTTTTAGCAACGAGTACATTGTGATAA                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CB660909             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GTTCTCAAGCTGCAGGTTGGTTTGCTGGGCATGGCCAGATCATTTCAGAAAGAGCTTGATCAGATAGCTGAGAAGGCAGATACTTCTACCCCGGCAGGGCTGAGCTATGTGCTAACTGAGACAACATTGGCATTACTTCGGCATCCAGATTGCTGCATCTCAGCTTACTCATCAGTTGATGTGAAAAGAAGTATAGATGATGGGGAGAAACGTTTTAATCAACTATCAATTGAGGAAAGAGGCAAATTTGATGAAGAGACACTTGTGAATGTGAACAGCATCAAGAGGCAGAAAGCAGGCAGCCAAAGATCGAGCGGTTTTAGCAACGAGTACATTGTGATAACCATATTGGTTGCTGCTGAGGGTGTACATAAGCTACCCAGTATAAATGGCAGCGGTGACTTGAAGACAGCTCTACAGAAGCTTGGTGCCATACCATCAAGAAAAATACTGGCAGTTGAGGTACTATGGACTCCACAAAATGAGAATGACACATTGTCAGAACGAGAGCTGCTCGAAGATTACCCGCTTTTAAGACCCCTATGAAGGATGCATTTTAGATTCATTTTTGCCGTATTTCAGCTTATTAACTATAGCTCA GGTTGGGTTGTAAAGAT AGGTAAC GTAAAAAAAATTGGCCTACATCATTCTCGCAACACAATTGTACGGTAGTCTTTCCTGACAGTCTTTGTAAATAGAATGCCGACACATAGTTGAATGCCAATTCTGCTCGGTGCATCCGCCTTCAGGGAAAAAAAAAGA]
[+] EMBL AA754358             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         cGAGTGTGAACAGCATCAAGAGGCAGAAAGCAGGCAGCCAAAGATCGAGCGGTTTTAGCAACGAGTACATTGTGATAACCATATTGGTTGCTGCTGAGGGTGTACATAAGCTACCCAGTATAAATGGCAGCGGTGACTTGAAGACAGCTCTACAGAAGCTTGGTGCCATACCATCAAGAAAAATACTGGCAGTTGAGGTACTATGGACTCCACAAAATGAGAATGACACATTGTCAGAACGAGAGCTGCTCGAAGATTACCCGCTTTTAAGACCCCTATGAAGGATGCATTTTAGATTCATTTTTGCCGTATTTCAGCTTATTAACTATAGCTCA GGTTGTGTTGTAAAGAT AGGTAAC GTAAAAAAAATTGGCCTACAWYAWTCTCGCAA                                                                                                          ]
[-] EMBL CB965390             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 AAGATCGAGCGGTTTTAGCAACGAGTACATTGTGATAACCATATTGGTTGCTGCTGAGGGTGTACATAAGCTACCCAGTATAAATGGCAGCGGTGACTTGAAGACAGCTCTACAGAAGCTTGGTGCCATACCATCAAGAAAAATACTGGCAGTTGAGGTACTATGGACTCCACAAAATGAGAATGACACATTGTCAGAACGAGAGCTGCTCGAAGATTACCCGCTTTTAAGACCCCTATGAAGGATGCATTTTAGATTCATTTTTGCCGTATTTCAGCTTATTAACTATAGCTCACGGTTGTGTTGTAAAGATNAGGTAACNGTAAAAAAAATTGGCCTACATCATTCTCGCAACAAAATTGTACGGTAGTCTTTCCTGACAGTCTTTGTAAATAGAATGCCGACACATAGTTGAATACCAATTCT                                  ]




>consensus_13730#0
GACGACCTCGCTGCTCCTGGAGGCCACCCCGCGCCTCCTCTCGCTGCCGCCGCGGCGGCC
TGTGCAGCCCCGTGGTGGCATCTTCCTCCTCAAGCCGCCGCCGCCGCCGCCTTTCCCCTC
CCGCCGCGGGGTGGCAGTGGCGGTGGCACCGCCCCTCCGCGCCTCCCACCCGGACACGGC
GCGCCGGGTGTCCGTGTCCCCCGCGGCGGTGGAGCCGCCGCCCAAGCCCCGCGCGCTGCT
CGACGCGATCAAGAGGTCCCTCCTCGACTCGCTCGCGGCGCTCAAGAAGCCCGCGCTGGC
GCTGCTCCTCGCCGGGGCGCTGCTCGCGGCAGCGGGGCCACACCACGGCGCCGCGCTGGC
GGCATCGGGCGGCCGCGTCGGCGGGTCGGCGTTCTCGTCGCGGTCGTCGTCGCCGCCGTC
GTCCTACGGGTACACCGCGCCGGCGCCGAGGGGCGGGTACTCGGNCGCGCCCTTCTACTC
GCCCTCGCCGTTCGTGTCCGTCGGCCCGGCGGTCGGCATCGGGTTCGGGGGATCCAGCTT
CTTTTTCGTCCTTATGGGGTTCGCCGCGTTCCTTTACCTCGCCGGGTTCCTCTCCGATTC
CTCCGGCGGTAGCGTGCTCACCGAGACGGACAAGACCACCGTTCTCAAGCTGCAGGTTGG
TTTGCTGGGCATGGCCAGATCATTTCAGAAAGAGCTTGATCAGATAGCTGAGAAGGCAGA
TACTTCTACCCCGGCAGGGCTGAGCTATGTGCTAACTGAGACAACATTGGCATTACTTCG
GCATCCAGATTGCTGCATCTCAGCTTACTCATCAGTTGATGTGAAAAGAAGTATAGATGA
TGGGGAGAAACGTTTTAATCAACTATCAATTGAGGAAAGAGGCAAATTTGATGAAGAGAC
ACTTGTGAATGTGAACAGCATCAAGAGGCAGAAAGCAGGCAGCCAAAGATCGAGCGGTTT
TAGCAACGAGTACATTGTGATAACCATATTGGTTGCTGCTGAGGGTGTACATAAGCTACC
CAGTATAAATGGCAGCGGTGACTTGAAGACAGCTCTACAGAAGCTTGGTGCCATACCATC
AAGAAAAATACTGGCAGTTGAGGTACTATGGACTCCACAAAATGAGAATGACACATTGTC
AGAACGAGAGCTGCTCGAAGATTACCCGCTTTTAAGACCCCTATGAAGGATGCATTTTAG
ATTCATTTTTGCCGTATTTCAGCTTATTAACTATAGCTCAGGTTGTGTTGTAAAGATAGG
TAACGTAAAAAAAATTGGCCTACATCATTCTCGCAACACAATTGTACGGTAGTCTTTCCT
GACAGTCTTTGTAAATAGAATGCCGACACATAGTTGAATGCCAATTCTGCTCGGTGCATC
CGCCTTCAGGGAAAAAAAAAGA

consensusID : consensus_13730#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 619
fasta sequence

                              [CAAATTCTTTTTGAGCTACTACGATGATACCATGTAGGATCCCTTTTATCATTTCAATTTACATTTAAAGAACACTATAATTCCAGTCATATAGCACTATTCTGGTGTTCCTGGGGTTTTCATGTTCTAATTCCAGCATTTGTAGGTTTGATCGATAAAATGTTTCTGATTACCTGTGTTGCTAGCAATCATCATGCAATATCTTATATGCTTTTGCTTCTTATCCGTAGATAACCATATTGGTTGCTGCTGAGGGTGTACATAAGCTACCCAGTATAAATGGCAGCGGTGACTTGAAGACAGCTCTACAGAAGCTTGGTGCCATACCATCAAGAAAAATACTGGCAGTTGAGGTACTATGGACTCCACAAAATGAGAATGACACATTGTCAGAACGAGAGCTGCTCGAAGATTACCCGCTTTTAAGACCCCTATGAAGGATGCATTTTAGATTCA-TTTTTGCCGTATTTCAGCTTATTAACTATAGCTCAGGTTGTGTTGTAAAGATAGGTAACGTAAAAAAAATTGGCCTACATCATTCTCGCAACACAATTGTACGGTAGTCTTTCCTGACAGTCTTTGTAAATAGAATGCCGACACATAGTTGAATACCAATTCT]

[-] EMBL CB636267             [CAAATTCTTTTTGAGCTACTACGATGATACCATGTAGGATCCTTTTTATCATTTCAATTTACATTTAAAGAACACTATAATTCCAGTCATATAGCACTATTCTGGTGTTCCTGGGGTTTTCATGTTCTAATTCCAGCATTTGTAGGTTTGATCGATAAAATGTTTCTGATTACCTGTGTTGCTAGCAATCATCATGCAATATCTTATATGCTTTTGCTTCTTATCCGTAGATAACCATATTGGTTGCTGCTGAGGGTGTACATAAGCTACCCAGTATAAATGGCAGCGGTGACTTGAAGACAGCTCTACAGAAGCTTGGTGCCATACCATCAAGAAAAATACTGGCAGTTGAGGTACTATGGACTCCACAAAATGAGAATGACACATTGTCAGAACGAGAGCTGCTCGAAGATTACCCGCTTTTAAGACCCCTATGAAGGATGCATTTTAGATTCA TTTTTGCCGTATTTCAGCTTATTAACTATAGCTCAGGTTGTGTTGTAAAGATAGGTAACGTAAAAAAAATTGGCCTACATCATTCTCGCAACACAATTGTACGGTAGTCTTTCCTGACAGTCTTTGTAAATAGAATGCCGACACATAGTTGAATACCAATTCT]
[-] EMBL CB636322             [CAAATTCTTTTTGAGCTACTACGATGATACCATGTAGGATCCCTTTTATCATTTCAATTTACATTTAAAGAACACTATAATTCCAGTCATATAGCACTATTCTGGTGTTCCTGGGGTTTTCATGTTCTAATTCCAGCATTTGTAGGTTTGATCGATAAAATGTTTCTGATTACCTGTGTTGCTAGCAATCATCATGCAATATCTTATATGCTTTTGCTTCTTATCCGTAGATAACCATATTGGTTGCTGCTGAGGGTGTACATAAGCTACCCAGTATAAATGGCAGCGGTGACTTGAAGACAGCTCTACAGAAGCTTGGTGCCATACCATCAAGAAAAATACTGGCAGTTGAGGTACTATGGACTCCACAAAATGAGAATGACACATTGTCAGAACGAGAGCTGCTCGAAGATTACCCGCTTTTAAGACCCCTATGAAGGATGCATTTTAGATTCA TTTTTGCCGTATTTCAGCTTATTAACTATAGCTCAGGTTGTGTTGTAAAGATAGGTAACGTAAAAAAAATTGGCCTACATCATTCTCGCAACACAATTGTACGGTAGTCTTTCCTGACAGTCTTTGTAAATAGAATGCCGACACATAGTTGAATACCAATTCT]
[-] EMBL CB636321             [                      GATGATACCATGTAGGATCCCTTTTATCATTTCAATTTACATTTAAAGAACACTATAATTCCAGTCATATAGCACTATTCTGGTGTTCCTGGGGTTTTCATGTTCTAATTCCAGCATTTGTAGGTTTGATCGATAAAATGTTTCTGATTACCTGTGTTGCTAGCAATCATCATGCAATATCTTATATGCTTTTGCTTCTTATCCGTAGATAACCATATTGGTTGCTGCTGAGGGTGTACATAAGCTACCCAGTATAAATGGCAGCGGTGACTTGAAGACAGCTCTACAGAAGCTTGGTGCCATACCATCAAGAAAAATACTGGCAGTTGAGGTACTATGGACTCCACAAAATGAGAATGACACATTGTCAGAACGAGAGCTGCTCGAAGATTACCCGCTTTTAAGACCCCTATGAAGGATGCATTTTAGATTCA TTTTTGCCGTATTTCAGCTTATTAACTATAGCTCAGGTTGTGTTGTAAAGATAGGTAACGTAAAAAAAATTGGCTTACATCATTCTCGCAACACAATTGTACGGTAGTCTTTCCTGACAGTCTTTGTAAATAGAATGCCGACACATAGTTGAATACCAATTCT]
[-] EMBL CB966531             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                TAGATTCACTTTTTGCCGTATTTCAGCTTATTAACTATAGCTCAGGTTGTGTTGTAAAGATAGGTAACGTAAAAAAAATTGGCCTACATCATTCTCGCAACA AATTGTACGGTAGTCTTTCCTGACAGTCTTTGTAAATAGAATGCCGACACATAGTTGAATACCCATTCT]




>consensus_13730#1
CAAATTCTTTTTGAGCTACTACGATGATACCATGTAGGATCCCTTTTATCATTTCAATTT
ACATTTAAAGAACACTATAATTCCAGTCATATAGCACTATTCTGGTGTTCCTGGGGTTTT
CATGTTCTAATTCCAGCATTTGTAGGTTTGATCGATAAAATGTTTCTGATTACCTGTGTT
GCTAGCAATCATCATGCAATATCTTATATGCTTTTGCTTCTTATCCGTAGATAACCATAT
TGGTTGCTGCTGAGGGTGTACATAAGCTACCCAGTATAAATGGCAGCGGTGACTTGAAGA
CAGCTCTACAGAAGCTTGGTGCCATACCATCAAGAAAAATACTGGCAGTTGAGGTACTAT
GGACTCCACAAAATGAGAATGACACATTGTCAGAACGAGAGCTGCTCGAAGATTACCCGC
TTTTAAGACCCCTATGAAGGATGCATTTTAGATTCATTTTTGCCGTATTTCAGCTTATTA
ACTATAGCTCAGGTTGTGTTGTAAAGATAGGTAACGTAAAAAAAATTGGCCTACATCATT
CTCGCAACACAATTGTACGGTAGTCTTTCCTGACAGTCTTTGTAAATAGAATGCCGACAC
ATAGTTGAATACCAATTCT

consensusID : consensus_13730#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 540
fasta sequence

                              [GGCAGGGCTGAGCTATGTGCTAACTGAGACAACATTGGCATTACTTCGGCATCCAGATTGCTGCATCTCAGCTTACTCATCAGTTGATGTGAAAAGAAGTATAGATGATGGGGAGAAACGTTTTAATCAACTATCAATTGAGGAAAGAGGCAAATTTGATGAAGAGACACTTGTGAATGTGAACAGCATCAAGAGGCAGAAAGCAGGCAGCCAAAGATCGAGTGGTTTTAGCAACGAGTACATTGTGGTATGTTTTTTTCTTTAGGAAAAGGTGATCAGGTGATCAGATCAAGGCGTTCCCTTTTATGTGATACTTGACATCATGCAATGGCCGGTAACATGGGAACTTCATTAGTGATATAGCCCCCATTACTGATGAGTGATTGATATTTTGTATATTTTCACCTAGTAGAATAAAAAAAATGGATGGCATTGGAAGATTCTGTCATGATATAGCCCCTATTAGTGATATTGCCTTACCCATACTGTTCTTTACTTCTTTTGTACTTTAATATCAATATTTTGAACTGCTATGAAGCA]

[-] EMBL CF331299             [GGCAGGGCTGAGCTATGTGCTAACTGAGACAACATTGGCATTACTTCGGCATCCAGATTGCTGCATCTCAGCTTACTCATCAGTTGATGTGAAAAGAAGTATAGATGATGGGGAGAAACGTTTTAATCAACTATCAATTGAGGAAAGAGGCAAATTTGATGAAGAGACACTTGTGAATGTGAACAGCATCAAGAGGCAGAAAGCAGGCAGCCAAAGATCGAGTGGTTTTAGCAACGAGTACATTGTGGTATGTTTTTTTCTTTAGGAAAAGGTGATCAGGTGATCAGATCAAGGCGTTCCCTTTTATGTGATACTTGACATCATGCAATGGCCGGTAACATGGGAACTTCATTAGTGATATAGCCCCCATTACTGATGAGTGATTGATATTTTGTATATTTTCACCTAGTAGAATAAAAAA                                                                                                                       ]
[+] EMBL CF331300             [        TGAGCTATGTGCTAACTGAGACAACATTGGCATTACTTCGGCATCCAGATTGCTGCATCTCAGCTTACTCATCAGTTGATGTGAAAAGAAGTATAGATGATGGGGAGAAACGTTTTAATCAACTATCAATTGAGGAAAGAGGCAAATTTGATGAAGAGACACTTGTGAATGTGAACAGCATCAAGAGGCAGAAAGCAGGCAGCCAAAGATCGAGTGGTTTTAGCAACGAGTACATTGTGGTATGTTTTTTTCTTTAGGAAAAGGTGATCAGGTGATCAGATCAAGGCGTTCCCTTTTATGTGATACTTGACATCATGCAATGGCCGGTAACATGGGAACTTCATTAGTGATATAGCCCCCATTACTGATGAGTGATTGATATTTTGTATATTTTCACCTAGTAGAATAAAAA                                                                                                                        ]
[-] EMBL OSC912               [                                                                                                                                                                                                                                                                         GAAAAGGTGATCAGGTGATCAGATCAAGGCGTTCCCTTTTATGTGATACTTGACATCATGCAATGGCCGGTAACATGGGAACTTCATTAGTGATATAGCCCCCATTACTGATGAGTGATTGATATTTTGTATATTTTCACCTAGTAGAATAAAAATAATGGATGGCATTGGAAGATTCTGTCATGATATAGCCCCTATTAGTGATATTGCCTTACCCATACTGTTCTTTACTTCTTTTGTACTTTAATATCAATATTTTGAACTGCTATGAAGCA]




>consensus_13730#2
GGCAGGGCTGAGCTATGTGCTAACTGAGACAACATTGGCATTACTTCGGCATCCAGATTG
CTGCATCTCAGCTTACTCATCAGTTGATGTGAAAAGAAGTATAGATGATGGGGAGAAACG
TTTTAATCAACTATCAATTGAGGAAAGAGGCAAATTTGATGAAGAGACACTTGTGAATGT
GAACAGCATCAAGAGGCAGAAAGCAGGCAGCCAAAGATCGAGTGGTTTTAGCAACGAGTA
CATTGTGGTATGTTTTTTTCTTTAGGAAAAGGTGATCAGGTGATCAGATCAAGGCGTTCC
CTTTTATGTGATACTTGACATCATGCAATGGCCGGTAACATGGGAACTTCATTAGTGATA
TAGCCCCCATTACTGATGAGTGATTGATATTTTGTATATTTTCACCTAGTAGAATAAAAA
AAATGGATGGCATTGGAAGATTCTGTCATGATATAGCCCCTATTAGTGATATTGCCTTAC
CCATACTGTTCTTTACTTCTTTTGTACTTTAATATCAATATTTTGAACTGCTATGAAGCA

consensusID : consensus_13730#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 431
fasta sequence

                              [GCTGAGACAACATTGGCATNCCTTCGGCATCCAGATTGCTGNNTCTCAGCTTACTCATCAGTTGATGTGAAAAGAAGTNTNNATGATGGGGAGAAACGTTTTAATCNACTATCAATTGAGGAAAGAGGCNAATTTGATGAACAGACACTTGTGAATGTGAACNGCATCAAGAGGCANAAAGCAGGCNNCCAAAGATCGAGCGGTTTTAGCAACNAATNCATTGTGATAACCATATTGGTTGCTGCTGANGGTGTTCNTNAGCTACCCNGTATAAATGGCNNCGGTGACTTGAAGACAGCTCTACAGAAGCTTGGTGCCNTNCCNTCTTTTNNAAATACTGGCNGTTGAGGTNCTATGGACTCCCNAAATGAGAATGACCNTTGTCNGAACGAGAGCTGCTCCAAGATTACCCCGCTTTTNAGACCCCCCCT]

[+] EMBL AA753200             [GCTGAGACAACATTGGCATNCCTTCGGCATCCAGATTGCTGNNTCTCAGCTTACTCATCAGTTGATGTGAAAAGAAGTNTNNATGATGGGGAGAAACGTTTTAATCNACTATCAATTGAGGAAAGAGGCNAATTTGATGAACAGACACTTGTGAATGTGAACNGCATCAAGAGGCANAAAGCAGGCNNCCAAAGATCGAGCGGTTTTAGCAACNAATNCATTGTGATAACCATATTGGTTGCTGCTGANGGTGTTCNTNAGCTACCCNGTATAAATGGCNNCGGTGACTTGAAGACAGCTCTACAGAAGCTTGGTGCCNTNCCNTCTTTTNNAAATACTGGCNGTTGAGGTNCTATGGACTCCCNAAATGAGAATGACCNTTGTCNGAACGAGAGCTGCTCCAAGATTACCCCGCTTTTNAGACCCCCCCT]




>consensus_13730#3
GCTGAGACAACATTGGCATNCCTTCGGCATCCAGATTGCTGNNTCTCAGCTTACTCATCA
GTTGATGTGAAAAGAAGTNTNNATGATGGGGAGAAACGTTTTAATCNACTATCAATTGAG
GAAAGAGGCNAATTTGATGAACAGACACTTGTGAATGTGAACNGCATCAAGAGGCANAAA
GCAGGCNNCCAAAGATCGAGCGGTTTTAGCAACNAATNCATTGTGATAACCATATTGGTT
GCTGCTGANGGTGTTCNTNAGCTACCCNGTATAAATGGCNNCGGTGACTTGAAGACAGCT
CTACAGAAGCTTGGTGCCNTNCCNTCTTTTNNAAATACTGGCNGTTGAGGTNCTATGGAC
TCCCNAAATGAGAATGACCNTTGTCNGAACGAGAGCTGCTCCAAGATTACCCCGCTTTTN
AGACCCCCCCT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13730#2      ------------------------------------------------------------
consensus_13730#3      ------------------------------------------------------------
consensus_13730#0      GACGACCTCGCTGCTCCTGGAGGCCACCCCGCGCCTCCTCTCGCTGCCGCCGCGGCGGCC 60
consensus_13730#1      ------------------------------------------------------------
                                                                                   

consensus_13730#2      ------------------------------------------------------------
consensus_13730#3      ------------------------------------------------------------
consensus_13730#0      TGTGCAGCCCCGTGGTGGCATCTTCCTCCTCAAGCCGCCGCCGCCGCCGCCTTTCCCCTC 120
consensus_13730#1      ------------------------------------------------------------
                                                                                   

consensus_13730#2      ------------------------------------------------------------
consensus_13730#3      ------------------------------------------------------------
consensus_13730#0      CCGCCGCGGGGTGGCAGTGGCGGTGGCACCGCCCCTCCGCGCCTCCCACCCGGACACGGC 180
consensus_13730#1      ------------------------------------------------------------
                                                                                   

consensus_13730#2      ------------------------------------------------------------
consensus_13730#3      ------------------------------------------------------------
consensus_13730#0      GCGCCGGGTGTCCGTGTCCCCCGCGGCGGTGGAGCCGCCGCCCAAGCCCCGCGCGCTGCT 240
consensus_13730#1      ------------------------------------------------------------
                                                                                   

consensus_13730#2      ------------------------------------------------------------
consensus_13730#3      ------------------------------------------------------------
consensus_13730#0      CGACGCGATCAAGAGGTCCCTCCTCGACTCGCTCGCGGCGCTCAAGAAGCCCGCGCTGGC 300
consensus_13730#1      ------------------------------------------------------------
                                                                                   

consensus_13730#2      ------------------------------------------------------------
consensus_13730#3      ------------------------------------------------------------
consensus_13730#0      GCTGCTCCTCGCCGGGGCGCTGCTCGCGGCAGCGGGGCCACACCACGGCGCCGCGCTGGC 360
consensus_13730#1      ------------------------------------------------------------
                                                                                   

consensus_13730#2      ------------------------------------------------------------
consensus_13730#3      ------------------------------------------------------------
consensus_13730#0      GGCATCGGGCGGCCGCGTCGGCGGGTCGGCGTTCTCGTCGCGGTCGTCGTCGCCGCCGTC 420
consensus_13730#1      ------------------------------------------------------------
                                                                                   

consensus_13730#2      ------------------------------------------------------------
consensus_13730#3      ------------------------------------------------------------
consensus_13730#0      GTCCTACGGGTACACCGCGCCGGCGCCGAGGGGCGGGTACTCGGNCGCGCCCTTCTACTC 480
consensus_13730#1      ------------------------------------------------------------
                                                                                   

consensus_13730#2      ------------------------------------------------------------
consensus_13730#3      ------------------------------------------------------------
consensus_13730#0      GCCCTCGCCGTTCGTGTCCGTCGGCCCGGCGGTCGGCATCGGGTTCGGGGGATCCAGCTT 540
consensus_13730#1      ------------------------------------------------------------
                                                                                   

consensus_13730#2      ------------------------------------------------------------
consensus_13730#3      ------------------------------------------------------------
consensus_13730#0      CTTTTTCGTCCTTATGGGGTTCGCCGCGTTCCTTTACCTCGCCGGGTTCCTCTCCGATTC 600
consensus_13730#1      ------------------------------------------------------------
                                                                                   

consensus_13730#2      ------------------------------------------------------------
consensus_13730#3      ------------------------------------------------------------
consensus_13730#0      CTCCGGCGGTAGCGTGCTCACCGAGACGGACAAGACCACCGTTCTCAAGCTGCAGGTTGG 660
consensus_13730#1      ------------------------------------------------------------
                                                                                   

consensus_13730#2      ------------------------------------------------------------
consensus_13730#3      ------------------------------------------------------------
consensus_13730#0      TTTGCTGGGCATGGCCAGATCATTTCAGAAAGAGCTTGATCAGATAGCTGAGAAGGCAGA 720
consensus_13730#1      --------------------------------------------------------CAAA 4
                                                                                   

consensus_13730#2      ------------GGCAGGGCTGAGCTATGTGCTAACTGAGACAACATTGGCATTACTTCG 48
consensus_13730#3      ----------------------------------GCTGAGACAACATTGGCATNCCTTCG 26
consensus_13730#0      TACTTCTACCCCGGCAGGGCTGAGCTATGTGCTAACTGAGACAACATTGGCATTACTTCG 780
consensus_13730#1      TTCTTTT-------------TGAGCTAC-TACGA--TGATACCATGTAGGATCCCTTTTA 48
                                                           *** ** *  * **      **  

consensus_13730#2      GCATCCAGATTGCTGCATCTCAGCTTACTCATCAGTTGATGTGAAAAGAAGTATAGATGA 108
consensus_13730#3      GCATCCAGATTGCTGNNTCTCAGCTTACTCATCAGTTGATGTGAAAAGAAGTNTNNATGA 86
consensus_13730#0      GCATCCAGATTGCTGCATCTCAGCTTACTCATCAGTTGATGTGAAAAGAAGTATAGATGA 840
consensus_13730#1      TCATTTCAATT--TACATTTAAAGAACACTATAATTCCAGTCATATAGCACTATTC-TGG 105
                        ***    ***  *   * * *        ** * *  *     * ** * * *   ** 

consensus_13730#2      TGGGGAGAAACGTTTTAATCAACTATCAATTGAGGAAAGAGGCAAATTTGAT-GAAGAGA 167
consensus_13730#3      TGGGGAGAAACGTTTTAATCNACTATCAATTGAGGAAAGAGGCNAATTTGAT-GAACAGA 145
consensus_13730#0      TGGGGAGAAACGTTTTAATCAACTATCAATTGAGGAAAGAGGCAAATTTGAT-GAAGAGA 899
consensus_13730#1      TGTTCCTGGG-GTTTTCATGTTCTA--ATTCCAGCATTT--GTAGGTTTGATCGATAAAA 160
                       **         ***** **   ***  * *  ** *     *    ****** **  * *

consensus_13730#2      CACTTGTGAATGTGAACAGCATCAAGAGGCAGAAAGCAGGCAGCCAAAGATCGAGTGGTT 227
consensus_13730#3      CACTTGTGAATGTGAACNGCATCAAGAGGCANAAAGCAGGCNNCCAAAGATCGAGCGGTT 205
consensus_13730#0      CACTTGTGAATGTGAACAGCATCAAGAGGCAGAAAGCAGGCAGCCAAAGATCGAGCGGTT 959
consensus_13730#1      TGTTTCTGATTACCTGTGTTGCTAGCAATCATCATGCAAT--ATCTTATAT------GCT 212
                          ** *** *            *  *  **  * ***      *  * **      * *

consensus_13730#2      TTAGCAACGAGTACATTGTGGTATGTTTTTTTCTTTAGGAAAAGGTGATCAGGTGATCAG 287
consensus_13730#3      TTAGCAACNAATNCATTGTGATAACCATATTGGTT-----GCTGCTGAN--GGTGTTCNT 258
consensus_13730#0      TTAGCAACGAGTACATTGTGATAACCATATTGGTT-----GCTGCTGAG--GGTGTACAT 1012
consensus_13730#1      TTTGCTTCTTATCCGTAG--ATAACCATATTGGTT-----GCTGCTGAG--GGTGTACAT 263
                       ** **  *   * * * *   **    * **  **        * ***   ****  *  

consensus_13730#2      ATCAAGGCGTTCCCTTTTATGTGATACTTGACATCATGCAATGGCCGGTAACATGGGAAC 347
consensus_13730#3      N----AGCTACCCNGTATAAATGGCNNC-GGTGACTTGAA---GACAGCTCTACAGAAGC 310
consensus_13730#0      A----AGCTACCCAGTATAAATGGCAGC-GGTGACTTGAA---GACAGCTCTACAGAAGC 1064
consensus_13730#1      A----AGCTACCCAGTATAAATGGCAGC-GGTGACTTGAA---GACAGCTCTACAGAAGC 315
                             **   **  * **  **      *    * ** *   * * *    *  * * *

consensus_13730#2      TTCATTAGTGATATAGCCCCCATTACTG-ATGAGTGATTGATATTTTGTATATTTTCACC 406
consensus_13730#3      TT----GGTGCCNTNCCNTCTTTTNNAA-AT-----ACTGGCNGTTGAGGTNCTATGGAC 360
consensus_13730#0      TT----GGTGCCATACCATCAAGAAAAATACTGGCAGTTGAGGTACTATGGACTCCACAA 1120
consensus_13730#1      TT----GGTGCCATACCATCAAGAAAAATACTGGCAGTTGAGGTACTATGGACTCCACAA 371
                       **     ***   *  *  *         *        **             *      

consensus_13730#2      TAGTAGAATAAAA-------AAAATGGATGGCATTGGAAGATTCTGTCATGATATAGCCC 459
consensus_13730#3      TCCCNAAATGAGA-------ATGACCNTTGTCNGAACGAGAG-CTGCTCCAAGATTACCC 412
consensus_13730#0      AATGAGAATGACACATTGTCAGAACGAGAGCTGCTCGAAGATTACCCGCTTTTAAGACCC 1180
consensus_13730#1      AATGAGAATGACACATTGTCAGAACGAGAGCTGCTCGAAGATTACCCGCTTTTAAGACCC 431
                             *** * *       *  *     *        ***            *   ***

consensus_13730#2      CTATTAGTGATATTGCCTTACCCATACTGTTCTTTACTTC--TTTTGTACTTTAATATCA 517
consensus_13730#3      CGCTTTTNAGACCCCCCCT----------------------------------------- 431
consensus_13730#0      CTATGAAGGATGCATTTTAGATTCATTTTTGCCGTATTTCAGCTTATTAACTATAGCTCA 1240
consensus_13730#1      CTATGAAGGATGCATTTTAGATTCATTTTTGCCGTATTTCAGCTTATTAACTATAGCTCA 491
                       *  *                                                        

consensus_13730#2      A--TATTTTGAACTGCTATGAAGCA----------------------------------- 540
consensus_13730#3      ------------------------------------------------------------
consensus_13730#0      GGTTGTGTTGTAAAGATAGGTAACGTAAAAAAAATTGGCCTACATCATTCTCGCAACACA 1300
consensus_13730#1      GGTTGTGTTGTAAAGATAGGTAACGTAAAAAAAATTGGCCTACATCATTCTCGCAACACA 551
                                                                                   

consensus_13730#2      ------------------------------------------------------------
consensus_13730#3      ------------------------------------------------------------
consensus_13730#0      ATTGTACGGTAGTCTTTCCTGACAGTCTTTGTAAATAGAATGCCGACACATAGTTGAATG 1360
consensus_13730#1      ATTGTACGGTAGTCTTTCCTGACAGTCTTTGTAAATAGAATGCCGACACATAGTTGAATA 611
                                                                                   

consensus_13730#2      ------------------------------------------
consensus_13730#3      ------------------------------------------
consensus_13730#0      CCAATTCTGCTCGGTGCATCCGCCTTCAGGGAAAAAAAAAGA 1402
consensus_13730#1      CCAATTCT---------------------------------- 619