cluster # 1375

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 1375 cluster # 1375 Sequences # 2 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1375#0 length = 1882 sequences # 2
consensusID : consensus_1375#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1882
fasta sequence
                              [GGATCATTTTTCGGCCCTACGCGCGGCCTCCCTCCCGGGACGAATGAACGCGCTCGCCAACGCCCGGCGATCGAAGCGGCGGCGGTTCGATGGATTATAAAACTAGTATATCTCTCGCTTCTCTCTATCATTCTCCGTTGCCACGCTAATCGCTCAGCGCGGCAACTGTTCGACGGAATGCCGCCCCGGATTAGGAGGGCGCCGGCGAGGCGAGCGGCGCCGGAGGAAGTGCCCGACCGCGTCAGCGCTCTGCCGGACGAGGCGCTCCACGCCGTGCTATCGCTGCTCCCGGCGCACGACGCGGTGCGGACGTGCGTGCTCGCCCGGCGCTGGCGCCACCTCTGGGAGCACGCGCCGGCGCTCCGCGTCACCGACGTCGAGGGGTGGAATCCGCGGCTGCGGGGCGACGGCCTCGGCAGGTTCATCCGCTTCGTGGACGGCCTCTTCGTCAGCCGCCGCCGCCGCGACGCGCCTCTGGAGCTGTGCGACCTGGACTTCGATTTCCCGGAGGACAAGGGGAAGGATTGGCATGTCAACCGCTGGATCATGCTAGCCCTGTTGCGCCACCATGCCCGGGTGCTACGGATCTCTTTGCCCGCGTACATCACGCTGCCTGATGTGCCTCTCATCTCTCAGCGCCTCACCAGGTTAGAGCTTGATGGTGTTCTTGGCAACGATAACATTCTTGATTTCTCCTGCTGCCCGGCGCTGATTGCTCTGAAGATGAAGTGCTGCCGTATCAATGCCGAGAAGATGTCATCTCCATCCGTTAAAATCTTGAGCCTTGCCTCCTGTGAATTTTATCCAGCTACCCGTACTCAGATGTCTTTTCCAAGTGTTGTTTCATTGGAGCTAGATGGATGTTCTGGTAGCGTTCCTTTCCTTGAAAGCATGCCATCCTTGGTAGCTGCAATTGTTATATTTGATGACGATTATGCAGACAGATGTGACAATAGTGTCCTTGGTGACTGTGGCGACGATTCTTGCGTTGATTGCTGCAATTATTCTGACCGCAGCAAATGCGTTTGTCTCAATGGTTTATTGGAAGCTACACACTTGGAGTTGTCAGCTGAACCTGCAATGTATGTTTTCAGGAGGGATTTAAATTTGCTCTTGGCATGTCATACATTTGCCAAGTTGAAGACTTTGGCACTTGGTGAATGGTGCATGACTCATGACCTCAGTGCATTGATTCGGTTTCTACAGCAATCACCAATTTTGGAGAAGCTTACTATTAAAATCCCAGAGGAACCCAAATGTTCTATGGATGCAGGACAACAAAAGATACCAGAAGAGCCGTTTGTATCCAACCATCTTAAGATTGTTGAAATTAAATGCAAAGGCAAAGAGGTCATGTGGGTTTGCAAATTCTTGAAGACCCTGGGTACCTTTGGCATACCCCTCGAGAAAATTAACATCAAACTGACTAGTGAACACTGTCGATCTGAATGTTTTAATTTTGTCTGTACTGGTTTCAGCTGCTCCTAGAGCCTTCTGGATCAAGAGGAGGTCGGAAGAATTGGGCCGTTGGTGGATGAGATATCTCTTGAGATATTATTCAGACGTATCCGTGGTGTTGCAGTCCTCTTATTATATTGATTAAGTAGTCTCATCGGATTTGGTTCCATATTTACTATATTAGCGATATTAGAAGTACTCTTACATATTTGGCTAAAGTGTAGCCTTGCAGTATGAGTCATAGCTCTACTGCTTATGATGCTAAAGAACTCGTATCGGTACCATATCTAGTTCTGTATGTACGACATTATAAGTAGCCTTATATATTATGCTAGTATAGCCTTGCAGGATGAGTGGTATAGCTCTGTTGCGTATGATGCTAAAGAACTCGCCTTCTAAATCTGATGCAATTTAGATATAAATT]

[+] EMBL AK101566             [GGATCATTTTTCGGCCCTACGCGCGGCCTCCCTCCCGGGACGAATGAACGCGCTCGCCAACGCCCGGCGATCGAAGCGGCGGCGGTTCGATGGATTATAAAACTAGTATATCTCTCGCTTCTCTCTATCATTCTCCGTTGCCACGCTAATCGCTCAGCGCGGCAACTGTTCGACGGAATGCCGCCCCGGATTAGGAGGGCGCCGGCGAGGCGAGCGGCGCCGGAGGAAGTGCCCGACCGCGTCAGCGCTCTGCCGGACGAGGCGCTCCACGCCGTGCTATCGCTGCTCCCGGCGCACGACGCGGTGCGGACGTGCGTGCTCGCCCGGCGCTGGCGCCACCTCTGGGAGCACGCGCCGGCGCTCCGCGTCACCGACGTCGAGGGGTGGAATCCGCGGCTGCGGGGCGACGGCCTCGGCAGGTTCATCCGCTTCGTGGACGGCCTCTTCGTCAGCCGCCGCCGCCGCGACGCGCCTCTGGAGCTGTGCGACCTGGACTTCGATTTCCCGGAGGACAAGGGGAAGGATTGGCATGTCAACCGCTGGATCATGCTAGCCCTGTTGCGCCACCATGCCCGGGTGCTACGGATCTCTTTGCCCGCGTACATCACGCTGCCTGATGTGCCTCTCATCTCTCAGCGCCTCACCAGGTTAGAGCTTGATGGTGTTCTTGGCAACGATAACATTCTTGATTTCTCCTGCTGCCCGGCGCTGATTGCTCTGAAGATGAAGTGCTGCCGTATCAATGCCGAGAAGATGTCATCTCCATCCGTTAAAATCTTGAGCCTTGCCTCCTGTGAATTTTATCCAGCTACCCGTACTCAGATGTCTTTTCCAAGTGTTGTTTCATTGGAGCTAGATGGATGTTCTGGTAGCGTTCCTTTCCTTGAAAGCATGCCATCCTTGGTAGCTGCAATTGTTATATTTGATGACGATTATGCAGACAGATGTGACAATAGTGTCCTTGGTGACTGTGGCGACGATTCTTGCGTTGATTGCTGCAATTATTCTGACCGCAGCAAATGCGTTTGTCTCAATGGTTTATTGGAAGCTACACACTTGGAGTTGTCAGCTGAACCTGCAATGTATGTTTTCAGGAGGGATTTAAATTTGCTCTTGGCATGTCATACATTTGCCAAGTTGAAGACTTTGGCACTTGGTGAATGGTGCATGACTCATGACCTCAGTGCATTGATTCGGTTTCTACAGCAATCACCAATTTTGGAGAAGCTTACTATTAAAATCCCAGAGGAACCCAAATGTTCTATGGATGCAGGACAACAAAAGATACCAGAAGAGCCGTTTGTATCCAACCATCTTAAGATTGTTGAAATTAAATGCAAAGGCAAAGAGGTCATGTGGGTTTGCAAATTCTTGAAGACCCTGGGTACCTTTGGCATACCCCTCGAGAAAATTAACATCAAACTGACTAGTGAACACTGTCGATCTGAATGTTTTAATTTTGTCTGTACTGGTTTCAGCTGCTCCTAGAGCCTTCTGGATCAAGAGGAGGTCGGAAGAATTGGGCCGTTGGTGGATGAGATATCTCTTGAGATATTATTCAGACGTATCCGTGGTGTTGCAGTCCTCTTATTATATTGATTAAGTAGTCTCATCGGATTTGGTTCCATATTTACTATATTAGCGATATTAGAAGTACTCTTACATATTTGGCTAAAGTGTAGCCTTGCAGTATGAGTCATAGCTCTACTGCTTATGATGCTAAAGAACTCGTATCGGTACCATATCTAGTTCTGTATGTACGACATTATAAGTAGCCTTATATATTATGCTAGTATAGCCTTGCAGGATGAGTGGTATAGCTCTGTTGCGTATGATGCTAAAGAACTCGCCTTCTAAATCTGATGCAATTTAGATATAAATT]
[+] EMBL CF305691             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CCTCTGGAGCTGTGCGACCTGGACTTCGATTTCCCGGAGGACAAGGGGAAGGATTGGCATGTCAACCGCTGGATCATGCTAGCCCTGTTGCGCCACCATGCCCGGGTGCTACGGATCTCTTTGCCCGCGTACATCACGCTGCCTGATGTGCCTCTCATCTCTCAGCGCCTCACCAGGTTAGAGCTTGATGGTGTTCTTGGCAACGATAACATTCTTGATTTCTCCTGCTGCCCGGCGCTGATTGCTCTGAAGATGAAGTGCTGCCGTATCAATGCCGAGAAGATGTCATCTCCATCCGTTAAAATCTTGAGCCTTGCCTCCTGTGAATTTTATCCAGCTACCCGTACTCAGATGTCTTTTCCAAGTGTTGTTTCATTGGAGCTAGATGGATGTTCTGGTAGCGTTCCTTTCCTTGAAAGCATGCCATCCTTGGTAGCTGCAATTGTTATATTTGATGACGATTATGCAGACAGATGTGACAATAGTGTCCTTGGTGACTGTGGCGACGATTCTTGCGTTGATTGCTGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]




>consensus_1375#0
GGATCATTTTTCGGCCCTACGCGCGGCCTCCCTCCCGGGACGAATGAACGCGCTCGCCAA
CGCCCGGCGATCGAAGCGGCGGCGGTTCGATGGATTATAAAACTAGTATATCTCTCGCTT
CTCTCTATCATTCTCCGTTGCCACGCTAATCGCTCAGCGCGGCAACTGTTCGACGGAATG
CCGCCCCGGATTAGGAGGGCGCCGGCGAGGCGAGCGGCGCCGGAGGAAGTGCCCGACCGC
GTCAGCGCTCTGCCGGACGAGGCGCTCCACGCCGTGCTATCGCTGCTCCCGGCGCACGAC
GCGGTGCGGACGTGCGTGCTCGCCCGGCGCTGGCGCCACCTCTGGGAGCACGCGCCGGCG
CTCCGCGTCACCGACGTCGAGGGGTGGAATCCGCGGCTGCGGGGCGACGGCCTCGGCAGG
TTCATCCGCTTCGTGGACGGCCTCTTCGTCAGCCGCCGCCGCCGCGACGCGCCTCTGGAG
CTGTGCGACCTGGACTTCGATTTCCCGGAGGACAAGGGGAAGGATTGGCATGTCAACCGC
TGGATCATGCTAGCCCTGTTGCGCCACCATGCCCGGGTGCTACGGATCTCTTTGCCCGCG
TACATCACGCTGCCTGATGTGCCTCTCATCTCTCAGCGCCTCACCAGGTTAGAGCTTGAT
GGTGTTCTTGGCAACGATAACATTCTTGATTTCTCCTGCTGCCCGGCGCTGATTGCTCTG
AAGATGAAGTGCTGCCGTATCAATGCCGAGAAGATGTCATCTCCATCCGTTAAAATCTTG
AGCCTTGCCTCCTGTGAATTTTATCCAGCTACCCGTACTCAGATGTCTTTTCCAAGTGTT
GTTTCATTGGAGCTAGATGGATGTTCTGGTAGCGTTCCTTTCCTTGAAAGCATGCCATCC
TTGGTAGCTGCAATTGTTATATTTGATGACGATTATGCAGACAGATGTGACAATAGTGTC
CTTGGTGACTGTGGCGACGATTCTTGCGTTGATTGCTGCAATTATTCTGACCGCAGCAAA
TGCGTTTGTCTCAATGGTTTATTGGAAGCTACACACTTGGAGTTGTCAGCTGAACCTGCA
ATGTATGTTTTCAGGAGGGATTTAAATTTGCTCTTGGCATGTCATACATTTGCCAAGTTG
AAGACTTTGGCACTTGGTGAATGGTGCATGACTCATGACCTCAGTGCATTGATTCGGTTT
CTACAGCAATCACCAATTTTGGAGAAGCTTACTATTAAAATCCCAGAGGAACCCAAATGT
TCTATGGATGCAGGACAACAAAAGATACCAGAAGAGCCGTTTGTATCCAACCATCTTAAG
ATTGTTGAAATTAAATGCAAAGGCAAAGAGGTCATGTGGGTTTGCAAATTCTTGAAGACC
CTGGGTACCTTTGGCATACCCCTCGAGAAAATTAACATCAAACTGACTAGTGAACACTGT
CGATCTGAATGTTTTAATTTTGTCTGTACTGGTTTCAGCTGCTCCTAGAGCCTTCTGGAT
CAAGAGGAGGTCGGAAGAATTGGGCCGTTGGTGGATGAGATATCTCTTGAGATATTATTC
AGACGTATCCGTGGTGTTGCAGTCCTCTTATTATATTGATTAAGTAGTCTCATCGGATTT
GGTTCCATATTTACTATATTAGCGATATTAGAAGTACTCTTACATATTTGGCTAAAGTGT
AGCCTTGCAGTATGAGTCATAGCTCTACTGCTTATGATGCTAAAGAACTCGTATCGGTAC
CATATCTAGTTCTGTATGTACGACATTATAAGTAGCCTTATATATTATGCTAGTATAGCC
TTGCAGGATGAGTGGTATAGCTCTGTTGCGTATGATGCTAAAGAACTCGCCTTCTAAATC
TGATGCAATTTAGATATAAATT
clustalw multiple alignements is not computed in this case