These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13761#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 1535 fasta sequence [GGAATAGATCGATATCATCTCCTCTCATCTCATCTTAATTATCTCTCCCATGTGTCCCTAGACATATAGTCCATGCACTAATCGATCGATATATCTATATAGTTTTCGAGAGATATTTTGCTGGTTGCAATTAGTCTCGAGCTTACAGCGACCTTCCAGGTCAGAGGTAGCCGGATTAAATCCTTGGTTTATTTATAGTGCTTGATCGATCATGTCGTCTTCCTCCAATAGCGACTCCGGCAAGAAGGGCGGCAACCCTCTGGAAGCCATGGGCGCCTTCTTCTCGTCGCAGGTGAACCGCCGGAAGCTGGTCACCAGCGAGAAGCAGGCGCTGGCCACGCGGCTGTCCGCCGGCGGCGAGGCGTTCCCCGGCAGCGAGCACCGGCCGGCCGACCGGAAGACGTGGATGGCGGAGCTCGGGCCGGAGCGGCTGCGCGTGCACCAGCTGGTGTGGCCGGGGACGCACGACTCGGCGACGAACAAGATCGGCATCCCGTTCGTGACGCGCCCCTTCGCGCAGTGCCAGTCGCTGTCGGTGTACGAGCAGCTCGCCGCGGGCGCCCGCGTCATCGACGTGCGCGTCCAGGAGGAGCGGCGCGTCTGCCACGGCGTGCTCGCAACCTACTCCGTCGACGTCGTGCTCGACGACGTGAGGAGGTTCCTCGGCGAGACGGCGTCGGAGGTGGTGATCCTCGAGGTGCGCACCGAGTTCGGCCACGACGACCCGCCGGAGTTCGGCAGGTACCTGGTGGAGCAGCTCGGCGAGCACCTGATCCCGCAGGACGAGGCGGTGTTCCACAAGACCATCGCCGAGCTCCTCCCGCGGCGGCTCATCTGCGTGTGGAAGCCGCGCAAGTCGCCGGCGCCCAAGCCCGGCGAGCCGCTGTGGAGCGCCGGCTACCTCAGGGACAACTGGATCGACACCGACCTGCCGGAGACCAAGTTCGAGAGCAACGTCAAGTTCCTCGGCGAGCAGCCGCCGGTGGCCGACCGGAGGTTCTTCTACCGGGTGGAGAACACGGTGACGCCGCAGGCCGACAACCCGGTGCTCTGCGTCCGGCCGGTCACGCGGCGGATCCACGGCTACGCCCGCCTCTTCATCGCCGAGGTCTTCGCCAAGGGCCTCGGCGACAAGCTGCAGGTGTTCTCCACCGACTTCATCGACGGCGACTTCGTC-GACGCCTGCGCCGGCGTCA-CCAAGGCCCGCGTCG--ACGGCGCCGCGTGAGATTGCATGGCCGGGCCCTGTAGTAATTAGA---GG-------GGTCGCC-GCGTTTAGAGGATTTG-CTTC-GTTTCG--CCGGTG-TCG-CAGCGTACGTACAGATTAGTTTGTGTTGTTCGTGTTAGACA-CGTGATTTATGAATGATTTATTATCATGCATGTGTTGGGCGTTCGTGTGTGATTTAATTGTTGAAATGTATATAGTGGTGAAATTGCTCGTGTACAAAGGAATAATCGCAAAGTGCTCGTTTTGTTGTGATCGTTCGTAACGAGGGTAATGGAGAGGATCAAATTGGTAAAAAAAAAAAAAAAACAAAAAAGGA] [+] EMBL AK061726 [GGAATAGATCGATATCATCTCCTCTCATCTCATCTTAATTATCTCTCCCATGTGTCCCTAGACATATAGTCCATGCACTAATCGATCGATATATCTATATAGTTTTCGAGAGATATTTTGCTGGTTGCAATTAGTCTCGAGCTTACAGCGACCTTCCAGGTCAGAGGTAGCCGGATTAAATCCTTGGTTTATTTATAGTGCTTGATCGATCATGTCGTCTTCCTCCAATAGCGACTCCGGCAAGAAGGGCGGCAACCCTCTGGAAGCCATGGGCGCCTTCTTCTCGTCGCAGGTGAACCGCCGGAAGCTGGTCACCAGCGAGAAGCAGGCGCTGGCCACGCGGCTGTCCGCCGGCGGCGAGGCGTTCCCCGGCAGCGAGCACCGGCCGGCCGACCGGAAGACGTGGATGGCGGAGCTCGGGCCGGAGCGGCTGCGCGTGCACCAGCTGGTGTGGCCGGGGACGCACGACTCGGCGACGAACAAGATCGGCATCCCGTTCGTGACGCGCCCCTTCGCGCAGTGCCAGTCGCTGTCGGTGTACGAGCAGCTCGCCGCGGGCGCCCGCGTCATCGACGTGCGCGTCCAGGAGGAGCGGCGCGTCTGCCACGGCGTGCTCGCAACCTACTCCGTCGACGTCGTGCTCGACGACGTGAGGAGGTTCCTCGGCGAGACGGCGTCGGAGGTGGTGATCCTCGAGGTGCGCACCGAGTTCGGCCACGACGACCCGCCGGAGTTCGGCAGGTACCTGGTGGAGCAGCTCGGCGAGCACCTGATCCCGCAGGACGAGGCGGTGTTCCACAAGACCATCGCCGAGCTCCTCCCGCGGCGGCTCATCTGCGTGTGGAAGCCGCGCAAGTCGCCGGCGCCCAAGCCCGGCGAGCCGCTGTGGAGCGCCGGCTACCTCAGGGACAACTGGATCGACACCGACCTGCCGGAGACCAAGTTCGAGAGCAACGTCAAGTTCCTCGGCGAGCAGCCGCCGGTGGCCGACCGGAGGTTCTTCTACCGGGTGGAGAACACGGTGACGCCGCAGGCCGACAACCCGGTGCTCTGCGTCCGGCCGGTCACGCGGCGGATCCACGGCTACGCCCGCCTCTTCATCGCCGAGGTCTTCGCCAAGGGCCTCGGCGACAAGCTGCAGGTGTTCTCCACCGACTTCATCGACGGCGACTTCGTC GACGCCTGCGCCGGCGTCA CCAAGGCCCGCGTCG ACGGCGCCGCGTGAGATTGCATGGCCGGGCCCTGTAGTAATTAGA GG GGTCGCC GCGTTTAGAGGATTTG CTTC GTTTCG CCGGTG TCG CAGCGTACGTACAGATTAGTTTGTGTTGTTCGTGTTAGACA CGTGATTTATGAATGATTTATTATCATGCATGTGTTGGGCGTTCGTGTGTGATTTAATTGTTGAAATGTATATAGTGGTGAAATTGCTCGTGTACAAAGGAATAATCGCAAAGTGCT ] [+] EMBL AK065856 [ GCGACTCCGGCAAGAAGGGCGGCAACCCTCTGGAAGCCATGGGCGCCTTCTTCTCGTCGCAGGTGAACCGCCGGAAGCTGGTCACCAGCGAGAAGCAGGCGCTGGCCACGCGGCTGTCCGCCGGCGGCGAGGCGTTCCCCGGCAGCGAGCACCGGCCGGCCGACCGGAAGACGTGGATGGCGGAGCTCGGGCCGGAGCGGCTGCGCGTGCACCAGCTGGTGTGGCCGGGGACGCACGACTCGGCGACGAACAAGATCGGCATCCCGTTCGTGACGCGCCCCTTCGCGCAGTGCCAGTCGCTGTCGGTGTACGAGCAGCTCGCCGCGGGCGCCCGCGTCATCGACGTGCGCGTCCAGGAGGAGCGGCGCGTCTGCCACGGCGTGCTCGCAACCTACTCCGTCGACGTCGTGCTCGACGACGTGAGGAGGTTCCTCGGCGAGACGGCGTCGGAGGTGGTGATCCTCGAGGTGCGCACCGAGTTCGGCCACGACGACCCGCCGGAGTTCGGCAGGTACCTGGTGGAGCAGCTCGGCGAGCACCTGATCCCGCAGGACGAGGCGGTGTTCCACAAGACCATCGCCGAGCTCCTCCCGCGGCGGCTCATCTGCGTGTGGAAGCCGCGCAAGTCGCCGGCGCCCAAGCCCGGCGAGCCGCTGTGGAGCGCCGGCTACCTCAGGGACAACTGGATCGACACCGACCTGCCGGAGACCAAGTTCGAGAGCAACGTCAAGTTCCTCGGCGAGCAGCCGCCGGTGGCCGACCGGAGGTTCTTCTACCGGGTGGAGAACACGGTGACGCCGCAGGCCGACAACCCGGTGCTCTGCGTCCGGCCGGTCACGCGGCGGATCCACGGCTACGCCCGCCTCTTCATCGCCGAGGTCTTCGCCAAGGGCCTCGGCGACAAGCTGCAGGTGTTCTCCACCGACTTCATCGACGGCGACTTCGTC GACGCCTGCGCCGGCGTCA CCAAGGCCCGCGTCG ACGGCGCCGCGTGAGATTGCATGGCCGGGCCCTGTAGTAATTAGA GG GGTCGCC GCGTTTAGAGGATTTG CTTC GTTTCG CCGGTG TCG CAGCGTACGTACAGATTAGTTTGTGTTGTTCGTGTTAGACA CGTGATTTATGAATGATTTATTATCATGCATGTGTTGGGCGTTCGTGTGTGATTTAATTGTTGAAATGTATATAGTGGTGAAA ] [+] EMBL C93621 [ CGGCAACCCTCTGGAAGCCATGGNCGCCTTCTTCTCGTCGCAGGTGAACCGCCGGAAGCTGGTCACCAGCNAGAAGCAGGCGCTGGCCACGCGGCTGTCCGCCGGCGG NAGGCGTTCCCCGGCAGCAAGCACCGGCCGGCCGACCGGAAGACGTGGATGGCGGA NTCGGGCCGGAGCGGCTGCGCGTNCACCAGCTGGTGTGGCCGGGGACGCACGATTCGGCGACGAACAAGATCGGCATCCCGTTCGTAACGCGCCCCTTCGCGCAGTGCCAGTCGCTGTCGGTGTACGAGCAGCTCGCTGCGGGCGCCCGTTTNATCGACGTGCGCTTC ] [+] EMBL CB654476 [ AACCCTCTGGAAGCCATGGGCGCCTTCTTCTCGTCGCAGGTGAACCGCCGGAAGCTGGTCACCAGCGAGAAGCAGGCGCTGGCCACGCGGCTGTCCGCCGGCGGCGAGGCGTTCCCCGGCAGCGAGCACCGGCCGGCCGACCGGAAGACGTGGATGGCGGAGCTCGGGCCGGAGCGGCTGCGCGTGCACCAGCTGGTGTGGCCGGGGACGCACGACTCGGCGACGAACAAGATCGGCATCCCGTTCGTGACGCGCCCCTTCGCGCAGTGCCAGTCGCTGTCGGTGTACGAGCAGCTCGCCGCGGGCGCCCGCGTCATCGACGTGCGCGTCCAGGAGGAGCGGCGCGTCTGCCACGGCGTGCTCGCAACCTACTCCGTCGACGTCGTGCTCGACGACGTGAGGAGGTTCCTCGGCGAGACGGCGTCGGAGGTGGTGATCCTCGAGGTGCGCACCGAGTTCGGCCACGACGACCCGCCGGAGTTCGGCAGGTACCTGGTGGAGCAGCTCGGCGAGCACCTGATCCCGCAGGACGAGGCGGTGTTCCACAAGACCATCGCCGAGCTCCTCCCGCGGCGGCTCATCTGCGTGTGGAAGCCGCGCAAGTCGCCGGCGCCCAAGCCCGGCGAGCCGCTGTGGAGCGCCGGCTACCTCAGGGACAACTGGATCGACACCGACCTGCCGGAGACCAAGTTCGAGAGCAACGTCAAGTTCCTCGGCGAGCAGCCGCCGGTGGCCGACCGGAGGTTCTTCTACCGGGTGGAGAACACGGT ] [+] EMBL CB654860 [ CCCTCTCGTAGCCATGGGCGCCTTCTTCTCGTCGCAGGTGAACCGCCGGAAGCTGGTCACCAGCGAGAAGCAGGCGCTGGCCACGCGGCTGTCCGCCGGCGGCGAGGCGTTCCCCGGCAGCGAGCACCGGCCGGCCGACCGGAAGACGTGGATGGCGGAGCTCGGGCCGGAGCGGCTGCGCGTGCACCAGCTGGTGTGGCCGGGGACGCACGACTCGGCGACGAACAAGATCGGCATCCCGTTCGTGACGCGCCCCTTCGCGCAGTGCCAGTCGCTGTCGGTGTACGAGCAGCTCGCCGCGGGCGCCCGCGTCATCGACGTGCGCGTCCAGGAGGAGCGGCGCGTCTGCCACGGCGTGCTCGCAACCTACTCCGTCGACGTCGTGCTCGACGACGTGAGGAGGTTCCTCGGCGAGACGGCGTCGGAGGTGGTGATCCTCGAGGTGCGCACCGAGTTCGGCCACGACGACCCGCCGGAGTTCGGCAGGTACCTGGTGGAGCAGCTCGGCGAGCACCTGATCCCGCAGGACGAGGCGGTGTTCCACAAGACCATCGCCGAGCTCCTCCCGCGGCGGCTCATCTGCGTGTGGAAGCCGCGCAAGTCGCCGGCGCCCAAGCCCGGCGAGCCGCTGTGGAGCGCCGGCTACCTCAGGGACAACTGGATCGACACCGACCTGCCGGAGACCAAGTTCGAGAG ] [+] EMBL AU174534 [ TCTGGAAGCCATGGGCGCCTTCTTCTCGTCGCAGGTGAACCGCCGGAAGCTGGTCACCAGCGAGAAGCAGGCGCTGGCCACGCGGCTGTCCGCCGGCGGCGAGGCGTTCTCCGGCAGCGAGCACCGGCCGGCCGACCGGAAGACGTGGATGGCGGAGCTCGGGCCGGAGCGGCTGCGCGTGCACCAGCTGGTGTGGCCGGGGACGCACGACTCGGCGACGAACAAGATCGGCATCCCGTTCGTGACGCGCCCCTTCGCGCAGTGCCAGTCGCTGTCGGTGTACGAGCAGCTCGCCGCGGGCGCCCGCGTCATCGACGTGCGCGTCCAGGAGGAGCGGCGCGTCTGCCACGGCGTGCTCGCAACCTACTCCGTCGACGTCGTGCTCGACGACGTGAGGAGGTTCCTCGGCGAGACG ] [+] EMBL CB684595 [ ATGGGCGCCTTCTTCTCGTCGCAGGTGAACCGCCGGAAGCTGGTCACCAGCGAGAAGCAGGCGCTGGCCACGCGGCTGTCCGCCGGCGGCGAGGCGTTCCCCGGCAGCGAGCACCGGCCGGCCGACCGGAAGACGTGGATGGCGGAGCTCGGGCCGGAGCGGCTGCGCGTGCACCAGCTGGTGTGGCCGGGGACGCACGACTCGGCGACGAACAAGATCGGCATCCCGTTCGTGACGCGCCCCTTCGCGCAGTGCCAGTCGCTGTCGGTGTACGAGCAGCTCGCCGCGGGCGCCCGCGTCATCGACGTGCGCGTCCAGGAGGAGCGGCGCGTCTGCCACGGCGTGCTCGCAACCTACTCCGTCGACGTCGTGCTCGACGACGTGAGGAGGTTCCTCGGCGAGACGGCGTCGGAGGTGGTGATCCTCGAGGTGCGCACCGAGTTCGGCCACGACGACCCGCCGGAGTTCGGCAGGTACCTGGTGGAGCAGCTCGGCGAGCACCTGATCCCGCAGGACGAGGCGGTGTTCCACAAGACCATCGCCGAGCTCCTCCCGCGGCGGCTCATCTGCGTGTGGAAGCCGCGCAAGTCGCCGGCGCCCAAGCCCGGCGAGCCGCTGTGGAGCGCCGGCTACCTCAGGGACAACTGGATCGACACCGACCTGCCGGAGACCAAGTTCGAGAGCAACGTCAAGTTCCTCGGCGAGCAGCCGCCGGTG ] [-] EMBL CB654477 [ GGTTCCTCGGCGAGACGGCGTCGGAGGTGGTGATCCTCGAGGTGCGCACCGAGTTCGGCCACGACGACCCGCCGGAGTTCGGCAGGTACCTGGTGGAGCAGCTCGGCGAGCACCTGATCCCGCAGGACGAGGCGGTGTTCCACAAGACCATCGCCGAGCTCCTCCCGCGGCGGCTCATCTGCGTGTGGAAGCCGCGCAAGTCGCCGGCGCCCAAGCCCGGCGAGCCGCTGTGGAGCGCCGGCTACCTCAGGGACAACTGGATCGACACCGACCTGCCGGAGACCAAGTTCGAGAGCAACGTCAAGTTCCTCGGCGAGCAGCCGCCGGTGGCCGACCGGAGGTTCTTCTACCGGGTGGAGAACACGGTGACGCCGCAGGCCGACAACCCGGTGCTCTGCGTCCGGCCGGTCACGCGGCGGATCCACGGCTACGCCCGCCTCTTCATCGCCGAGGTCTTCGCCAAGGGCCTCGGCGACAAGCTGCAGGTGTTCTCCACCGACTTCATCGACGGCGACTTCGTC GACGCCTGCGCCGGCGTCA CCAAGGCCCGCGTCG ACGGCGCCGCGTGAGATTGCATGGCCGGGCCCTGTAGTAATTAGA GG GGTCGCC GCGTTTAGAGGATTTG CTTC GTTTCG CCGGTG TCG CAGCGTACGTACAGATTAGTTTGTGTTGTTCGTGTTAGACA CGTGATTTATGAATGATTTATTATCATGCATGTGTTGGGCGTTCGTGTGTGATTTAATGGTTGAAATGTATATAGTGGTGAAATTGCTCGT ] [-] EMBL CB684596 [ CCGAGCTCCTCCCGCGGCGGCTCATCTGCGTGTGGAAGCCGCGCAAGTCGCCGGCGCCCAAGCCCGGCGAGCCGCTGTGGAGCGCCGGCTACCTCAGGGACAACTGGATCGACACCGACCTGCCGGAGACCAAGTTCGAGAGCAACGTCAAGTTCCTCGGCGAGCAGCCGCCGGTGGCCGACCGGAGGTTCTTCTACCGGGTGGAGAACACGGTGACGCCGCAGGCCGACAACCCGGTGCTCTGCGTCCGGCCGGTCACGCGGCGGATCCACGGCTACGCCCGCCTCTTCATCGCCGAGGTCTTCGCCAAGGGCCTCGGCGACAAGCTGCAGGTGTTCTCCACCGACTTCATCGACGGCGACTTCGTC GACGCCTGCGCCGGCGTCA CCAAGGCCCGCGTCG ACGGCGCCGCGTGAGATTGCATGGCCGGGCCCTGTAGTAATTAGA GG GGTCGCC GCGTTTAGAGGATTTG CTTC GTTTCG CCGGTG TCG CAGCGTACGTACAGATTAGTTTGTGTTGTTCGTGTTAGACA CGTGATTTATGAATGATTTATTATCATGCATGTGTTGGGCGTTCGTGTGTGATTTAATTGTTGAAATGTATATAGTGGTGAAATTGCTCGTGTACAAAGGAATAATCGCAAAGTGCTCGTTTTGTTGTGATCGTTCGTAACGAGGGTAATGGAGAGGAT ] [+] EMBL BI812265 [ CGT TTGAA CCGCGCAATTCGCCGGC TCCAA CCCGCCGA CC CTGT GAGC CC GCTACCTCAGGGACAACTGGATCGACACCGACCTGCCGGAGACCAAGTTCGAGA CAAC TCAAGTTCCTCGGCGA CA CC CCGGT GCCGACCGGAGGTTCTTCTACCGGGTGGAGAACACGGTGACGCCGCA GCCGACAACCCGGTGCTCTGCGTCC GCCGGTCACGCGGCGGATCCACGGCTACGCCCGCCTCTTCATCGCCGAGGTCTTCGCCAAGGGCCTCGGCGACAAGCTGCAGGTGTTCTCCACCGACTTCATCGACGGCGACTTCGTC GACGCCTGCGCCGGCGTCA CCAA GCCCGCGTCG ACGGC CCGCGTGAGATTGCATGGTCGGGCCCTGTAGTAATTAGA G GGTC CC GCGTTTAGAGGATTTG CTTC GTTTCG CCGGTG TCG CAGCGTACGTACAGATTAGTTTGTGTTGTTCGTGTTAGACA CGTGATTTATGAATGATTTATTATCATGCATGTGTTGGGCGTTCGTGTGTGATTTAATTGTTGAAATGTATATAGTGGTGAAATTGCTCGTGTAC AAGGAATAATCGC AAGTGCTCGTTTTGTTGTGATCGTTCGTAACGAGGGTAATGGAGAGGATCAATTTGGTAAAAAAA ] [-] EMBL CB654861 [ CCGGCGCCCAAGCCCGGCGAGCCGCTGTGGAGCGCCGGCTACCTCAGGGACAACTGGATCGACACCGCCCTGCCGGAGACCAAGTTCGAGAGCAACGTCAAGTTCCTCGGCGAGCAGCCGCCGGTGGCCGACCGGAGGTTCTTCTACCGGGTGGAGAACACGGTGACGCCGCAGGCCGACAACCCGGTGCTTTGCGTCCGGCCGGTCACGCGGCGGATCCACGGTTACGCCCGCCTCTTCATCGCCGAGGTTTTCGCCAAGGGCCTCGGCGACAAGCTGCAGGTGTTTTCCCCCGACTTCATCGACGGCGACTTCGTC GACGCCTGCGCCGGCGTCA CCAAGGCCCGCGTCG ACGGCGCCGCGTGAGATTGCATGGCCGGGCCCTGTAGTAATTAGA GG GGTCGCC GCGTTTAGAGGATTTG CTTC GTTTCG CCGGTG TCG CAGCGTACGTACAGATTAGTTTGTGTTGTTCGTGTTAGACC CGTGATTTATGAATGATTTATTATCATGCATGTGTTGGGCGTTCGTGTGTGATTTAATTGTTGAAATGTATATAGTGGTGAAATTGCTCGTGTCCAAAGGAATAATCGCAAAGTGCTCGTTTTGTTGTGATCGTTCGTACCGAGGGTAAGGGGGAGGATCAAATTGGTAAAAAAAAAAAAAAAACAAAAAAGGA] [+] EMBL BQ906064 [ GATCGACACCGACCTGCCGGAGACCAAGTTCGAGAGCAACGTCAAGTTCCTCGGCGAGCAGCCGCCGGTGGCCGACCGGAGGTTCTTCTACCGGGTGGAGAACACGGTGACGCCGCAGGCCGACAACCCGGTGCTCTGCGTCCGGCCGGTCACGCGGCGGATCCACGGCTACGCCCGCCTCTTCATCGCCGAGGTCTTCGCCAAGGGCCTCGGCGACAAGCTGCAGGTGTTCTCCACCGACTTCATCGACGGCGACTTCGTCAGACGCCTGCGCCGGCGTCACCCAAGGCCCGCGTCGTAACGGCGCCGCGTGAGATTGCATGGTCGGGCCCTGTAGTAATTAGATGTGGNGTGTTCGGTCCCCGGCGTTTAGAGGATTTGCCTTCTGTTTCGGCCCGGTGTTCGCCAGCGTACGTACAGATTAGTTTGTTTTGTTCGTGTTAGACACCNTGATTTATGAATGATTTATTATCATGCAaaaa ] [+] EMBL AU174535 [ CGGATCCACGGCTACGCCCGCCTCTTCATCGCCGAGGTCTTCGCCAAGGGCCTCGGCGACAAGCTGCAGGTGTTCTCCACCGACTTCATCGACGGCGACTTCGTC GACGCCTGCGCCGGCGTCA CCAAGGCCCGCGTCG ACGGCGCCGCGTGAGATTGCATGGCCGGGCCCTGTAGTAATTAGA GG GGTCGCC GCGTTTAGAGGATTTG CTTC GTTTCG CCGGTG TCG CAGCGTACGTACAGATTAGTTTGTGTTGTTCGTGTTAGACA CGTGATTTATGAATGATTTATTATCATGCATGTGTTGGGCGTTCGTGTGTGATTTAATTGTTGAAATGTATATAGTGGTGAAATTGCTCGTGTACAAAGGAATAATCGCAAAGTGCTCGTTTTGTTGTGATCGTTCGTAACGAGGGTAATGGAGAGGATCAAATTGGTAAAAAAAAAAAA ] consensusID : consensus_13761#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 582 fasta sequence [CTCGGCGACAGCCGCCCGGTGCCCGACCGGAGGTTCTTCTACCGGGTGGAGAACACGGTGACGCCGCAGGCCGACAACCCGGTGCTCTGCGTCCGGCCGGTCACGCGGCGGATCCACGGCTACGCCCGCCTCTTCATCGCCGAGGTNNTTCGCCAAGGGCCTCGGCGACAAGCTGCAGGTGTTCCCCCCCGACTTCATCGACGGCGACTTCGTCGACGCCTGCGCCCGGCGTCANCCAAGGCCCGCGTCGACGGCNCCCGCGTGAGATTGCATGGTCGGGCCCCTGTAGTAATTAGAGGGGTCGCCCGCGTTTAGAGGATTTGCTTCGTTTCGCCCGGTGTCGCCAGCGTACGTACAGATTAGTTTGTGTTGTTCGTGTTAGACACCGTGATTTATGAATGATTTATTATCACTGCATGTGTTGGGCGTTCGTGTGTGATTTAATTGTTGAAATGTATATAGTGGTGAAATTGCTCGTGTACAAGGAATAATCGCAAGTGCTCGTTTTGTTGTGATCGTTCGTAACGAGGGTAATGGAGAGGATCNAATTGGTATTTGATTGTGTTCCCTCCAAAAAAAAAA] [+] EMBL BQ906897 [CTCGGCGACAGCCGCCCGGTGCCCGACCGGAGGTTCTTCTACCGGGTGGAGAACACGGTGACGCCGCAGGCCGACAACCCGGTGCTCTGCGTCCGGCCGGTCACGCGGCGGATCCACGGCTACGCCCGCCTCTTCATCGCCGAGGTNNTTCGCCAAGGGCCTCGGCGACAAGCTGCAGGTGTTCCCCCCCGACTTCATCGACGGCGACTTCGTCGACGCCTGCGCCCGGCGTCANCCAAGGCCCGCGTCGACGGCNCCCGCGTGAGATTGCATGGTCGGGCCCCTGTAGTAATTAGAGGGGTCGCCCGCGTTTAGAGGATTTGCTTCGTTTCGCCCGGTGTCGCCAGCGTACGTACAGATTAGTTTGTGTTGTTCGTGTTAGACACCGTGATTTATGAATGATTTATTATCACTGCATGTGTTGGGCGTTCGTGTGTGATTTAATTGTTGAAATGTATATAGTGGTGAAATTGCTCGTGTACAAGGAATAATCGCAAGTGCTCGTTTTGTTGTGATCGTTCGTAACGAGGGTAATGGAGAGGATCNAATTGGTATTTGATTGTGTTCCCTCCAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_13761#0 GGAATAGATCGATATCATCTCCTCTCATCTCATCTTAATTATCTCTCCCATGTGTCCCTA 60 consensus_13761#1 ------------------------------------------------------------ consensus_13761#0 GACATATAGTCCATGCACTAATCGATCGATATATCTATATAGTTTTCGAGAGATATTTTG 120 consensus_13761#1 ------------------------------------------------------------ consensus_13761#0 CTGGTTGCAATTAGTCTCGAGCTTACAGCGACCTTCCAGGTCAGAGGTAGCCGGATTAAA 180 consensus_13761#1 ------------------------------------------------------------ consensus_13761#0 TCCTTGGTTTATTTATAGTGCTTGATCGATCATGTCGTCTTCCTCCAATAGCGACTCCGG 240 consensus_13761#1 ------------------------------------------------------------ consensus_13761#0 CAAGAAGGGCGGCAACCCTCTGGAAGCCATGGGCGCCTTCTTCTCGTCGCAGGTGAACCG 300 consensus_13761#1 ------------------------------------------------------------ consensus_13761#0 CCGGAAGCTGGTCACCAGCGAGAAGCAGGCGCTGGCCACGCGGCTGTCCGCCGGCGGCGA 360 consensus_13761#1 ------------------------------------------------------------ consensus_13761#0 GGCGTTCCCCGGCAGCGAGCACCGGCCGGCCGACCGGAAGACGTGGATGGCGGAGCTCGG 420 consensus_13761#1 ------------------------------------------------------------ consensus_13761#0 GCCGGAGCGGCTGCGCGTGCACCAGCTGGTGTGGCCGGGGACGCACGACTCGGCGACGAA 480 consensus_13761#1 ------------------------------------------------------------ consensus_13761#0 CAAGATCGGCATCCCGTTCGTGACGCGCCCCTTCGCGCAGTGCCAGTCGCTGTCGGTGTA 540 consensus_13761#1 ------------------------------------------------------------ consensus_13761#0 CGAGCAGCTCGCCGCGGGCGCCCGCGTCATCGACGTGCGCGTCCAGGAGGAGCGGCGCGT 600 consensus_13761#1 ------------------------------------------------------------ consensus_13761#0 CTGCCACGGCGTGCTCGCAACCTACTCCGTCGACGTCGTGCTCGACGACGTGAGGAGGTT 660 consensus_13761#1 ------------------------------------------------------------ consensus_13761#0 CCTCGGCGAGACGGCGTCGGAGGTGGTGATCCTCGAGGTGCGCACCGAGTTCGGCCACGA 720 consensus_13761#1 ------------------------------------------------------------ consensus_13761#0 CGACCCGCCGGAGTTCGGCAGGTACCTGGTGGAGCAGCTCGGCGAGCACCTGATCCCGCA 780 consensus_13761#1 ------------------------------------------------------------ consensus_13761#0 GGACGAGGCGGTGTTCCACAAGACCATCGCCGAGCTCCTCCCGCGGCGGCTCATCTGCGT 840 consensus_13761#1 ------------------------------------------------------------ consensus_13761#0 GTGGAAGCCGCGCAAGTCGCCGGCGCCCAAGCCCGGCGAGCCGCTGTGGAGCGCCGGCTA 900 consensus_13761#1 ------------------------------------------------------------ consensus_13761#0 CCTCAGGGACAACTGGATCGACACCGACCTGCCGGAGACCAAGTTCGAGAGCAACGTCAA 960 consensus_13761#1 ------------------------------------------------------------ consensus_13761#0 GTTCCTCGGCGAGCAGCCGCC-GGTGGCCGACCGGAGGTTCTTCTACCGGGTGGAGAACA 1019 consensus_13761#1 ----CTCGGCGA-CAGCCGCCCGGTGCCCGACCGGAGGTTCTTCTACCGGGTGGAGAACA 55 ******** ******** **** ********************************* consensus_13761#0 CGGTGACGCCGCAGGCCGACAACCCGGTGCTCTGCGTCCGGCCGGTCACGCGGCGGATCC 1079 consensus_13761#1 CGGTGACGCCGCAGGCCGACAACCCGGTGCTCTGCGTCCGGCCGGTCACGCGGCGGATCC 115 ************************************************************ consensus_13761#0 ACGGCTACGCCCGCCTCTTCATCGCCGAGGTCTT-CGCCAAGGGCCTCGGCGACAAGCTG 1138 consensus_13761#1 ACGGCTACGCCCGCCTCTTCATCGCCGAGGTNNTTCGCCAAGGGCCTCGGCGACAAGCTG 175 ******************************* * ************************* consensus_13761#0 CAGGTGTTCTCCACCGACTTCATCGACGGCGACTTCGTCGACGCCTGCGCC-GGCGTCAC 1197 consensus_13761#1 CAGGTGTTCCCCCCCGACTTCATCGACGGCGACTTCGTCGACGCCTGCGCCCGGCGTCAN 235 ********* ** ************************************** ******* consensus_13761#0 C-AAGGCCCGCGTCGACGGCGCC-GCGTGAGATTGCATGGCCGGGCCC-TGTAGTAATTA 1254 consensus_13761#1 CCAAGGCCCGCGTCGACGGCNCCCGCGTGAGATTGCATGGTCGGGCCCCTGTAGTAATTA 295 * ****************** ** **************** ******* *********** consensus_13761#0 GAGGGGTCGCC-GCGTTTAGAGGATTTGCTTCGTTTCGCC-GGTGTCGC-AGCGTACGTA 1311 consensus_13761#1 GAGGGGTCGCCCGCGTTTAGAGGATTTGCTTCGTTTCGCCCGGTGTCGCCAGCGTACGTA 355 *********** **************************** ******** ********** consensus_13761#0 CAGATTAGTTTGTGTTGTTCGTGTTAGACAC-GTGATTTATGAATGATTTATTATCA-TG 1369 consensus_13761#1 CAGATTAGTTTGTGTTGTTCGTGTTAGACACCGTGATTTATGAATGATTTATTATCACTG 415 ******************************* ************************* ** consensus_13761#0 CATGTGTTGGGCGTTCGTGTGTGATTTAATTGTTGAAATGTATATAGTGGTGAAATTGCT 1429 consensus_13761#1 CATGTGTTGGGCGTTCGTGTGTGATTTAATTGTTGAAATGTATATAGTGGTGAAATTGCT 475 ************************************************************ consensus_13761#0 CGTGTACAAAGGAATAATCGCAAAGTGCTCGTTTTGTTGTGATCGTTCGTAACGAGGGTA 1489 consensus_13761#1 CGTGTACAA-GGAATAATCGCAA-GTGCTCGTTTTGTTGTGATCGTTCGTAACGAGGGTA 533 ********* ************* ************************************ consensus_13761#0 ATGGAGAGGATCAAATTGGTAAAAAAAAAAAAAAAA--CAAAAAAGGA- 1535 consensus_13761#1 ATGGAGAGGATCNAATTGGTATTTGATTGTGTTCCCTCCAAAAAAAAAA 582 ************ ******** * ******* * |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||