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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13769#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 1630 fasta sequence
[GGCGGCGGCGTGGCCGCCGGCTACGCGGCGCTCGAGTTCGCCCGCCGCGGCGGCTACTCCCGCGGCGAGCTCTGCATCATCTCCGAAGAGACGGTTGCTCCTTATGAACGTCCGGCACTAAGCAAAGGCTATTTACTCCCAGAAGGTGCCGCTCGTCTTCCAGGATTTCATACCTGCGTTGGTGCCAATGATGAATTACTGACGGCAAAATGGTACAAAGAAAATGGTATTGAACTTGTTCTCGGAACAAAAGTGATAACCGCTGATGTAAGGATGAAGACATTGCTTACAGCCACTGGAGAAACTATCAGCTATAAGAATCTTATCATTGCGACCGGTGCTCGGGCTTTGAAGCTGGAAGAGTTTGGAATCAGTGGATCAGATGCTTCGAACATATGTTATTTGCGCAATCTTGATGATGCGGATAAGTTAGTGAATGTGATGAAATCATGTCCTGGTGGAAATGCTGTCGTCATTGGTGGTGGCTATATAGGAATGGAGTGCGCAGCAGCATTGGTTACTAATAGGATAAAAGTAACCATGGTCTTCCCTGAAAGCCACTGCATGGCCCGTCTATTTACACCAAAAATTGCAGAATATTATGAGAACTATTACACTTCAAAAGGTGTTACCTTTGTCAAAGGAACTGTGCTTACATCCTTTGAAAAAGATTCGACAGGGAAGGTGACTTCAGTAATCCTGAAAGATGGTAAACACCTTCCTGCCGATATGGTTGTGGTTGGTATTGGCATCCGTGCAAGCACTGGTCTTTTTGAAGGTCAGCTGTTGAT-GGAGCAAGGTGGGATAAAGGTAAACGGACAAATGTTAACAAGCGATGGTTCTGTATATGCCGTTGGCGATGTTGCTGCCTTCCCTATCAAGCTCTTTGATGGTGTTATACGACGGCTTGAGCATGTTGACTCAGCTCGCAGAACAGCGAGACATGCTGTTGCAGCCATCCTGGAGCCTTCAAAAACTAAGGACATCGATTACCTGCCATTC-TTC-TACTCCAGGGTCTTCACATTATCCTGGCAATTCTATGGGA-ACAATACCGGAGAAGTGGTTCAC-TTTGGAGACTTCACAAACAGCAGCCCAAGGTTTGGTGCCTATTGGGTTGATAAAAGCCGGATTAGGGGTGCATTTCTTGAAGGTGGAAGTCGAGAAGAATACGAGGCGATATCGAATGTTGTTCGGCGTAAAGCTAAGGTTATAAACATTGCTGAACTTGAAAAGCA-AGGTCTGATGTTTGCCATTCAAGAAAGCCAGAAGGACTTGCCTGATGGTGGGCTTGCTCTTGGTGAAAAGCCTACATATGTATGGCATGCAACGGCTGGTGTCATTGCAGCTGCGTCCATTGCTGCATTTGGTTATTGGTACGGCAGGAAACGCCGTAGGTGGTGAAAAA-TCTGGGAGCGACTCATTCCTTTTGCAAATTCATCGTCTCCTGTGCCTACATAACTGATGGACTAAAGTTACTCAGAGAAAAGTCCTGTATAACCTGTATCAGAGAAAAAAATCATGTACAATCTGTATGAAAGTATCATCTTTGTA-CCAAATGTAAACAAATACACAGAT-CCCATAATATATATTGTTTAATGAAATGGTATGCTGTTATGAAAAAAAAAAAAGA]
[+] EMBL CB643198 [GGCGGCGGCGTGGCCGCCGGCTACGCGGCGCTCGAGTTCGCCCGCCGCGGCGGCTACTCCCGCGGCGAGCTCTGCATCATCTCCGAAGAGACGGTTGCTCCTTATGAACGTCCGGCACTAAGCAAAGGCTATTTACTCCCAGAAGGTGCCGCTCGTCTTCCAGGATTTCATACCTGCGTTGGTGCCAATGATGAATTACTGACGGCAAAATGGTACAAAGAAAATGGTATTGAACTTGTTCTCGGAACAAAAGTGATAACCGCTGATGTAAGGATGAAGACATTGCTTACAGCCACTGGAGAAACTATCAGCTATAAGAATCTTATCATTGCGACCGGTGCTCGGGCTTTGAAGCTGGAAGAGTTTGGAATCAGTGGATCAGATGCTTCGAACATATGTTATTTGCGCAATCTTGATGATGCGGATAAGTTAGTGAATGTGATGAAATCATGTCCTGGTGGAAATGCTGTCGTCATTGGTGGTGGCTATATAGGAATGGAGTGCGCAGCAGCATTGGTTACTAATAGGATAAAAGTAACCATGGTCTTCCCTGAAAGCCACTGCATGGCCCGTCTATTTACACCAAAAATTGCAGAATATTATGAGAACTATTACACTTCAAAAGGTGTTACCTTTGTCAAAGGAACTGTGCTTACATCCTTTGAAAAAGATTCGACAGGGAAGGTGACTTCAGTAATCCTGAAAGATGGTAAACACCTTCCTGCCGATATGGTTGTGGTTGGTATTGGCATCCGTGCAAGCACTGGTCTTTTTGAAGGTCAGCTGTTGAT GGAGCAGGGTGGGATAAAGGTAAA ]
[+] EMBL AK065585 [ AGTGATAACCGCTGATGTAAGGATGAAGACATTGCTTACAGCCACTGGAGAAACTATCAGCTATAAGAATCTTATCATTGCGACCGGTGCTCGGGCTTTGAAGCTGGAAGAGTTTGGAATCAGTGGATCAGATGCTTCGAACATATGTTATTTGCGCAATCTTGATGATGCGGATAAGTTAGTGAATGTGATGAAATCATGTCCTGGTGGAAATGCTGTCGTCATTGGTGGTGGCTATATAGGAATGGAGTGCGCAGCAGCATTGGTTACTAATAGGATAAAAGTAACCATGGTCTTCCCTGAAAGCCACTGCATGGCCCGTCTATTTACACCAAAAATTGCAGAATATTATGAGAACTATTACACTTCAAAAGGTGTTACCTTTGTCAAAGGAACTGTGCTTACATCCTTTGAAAAAGATTCGACAGGGAAGGTGACTTCAGTAATCCTGAAAGATGGTAAACACCTTCCTGCCGATATGGTTGTGGTTGGTATTGGCATCCGTGCAAGCACTGGTCTTTTTGAAGGTCAGCTGTTGAT GGAGCAAGGTGGGATAAAGGTAAACGGACAAATGTTAACAAGCGATGGTTCTGTATATGCCGTTGGCGATGTTGCTGCCTTCCCTATCAAGCTCTTTGATGGTGTTATACGACGGCTTGAGCATGTTGACTCAGCTCGCAGAACAGCGAGACATGCTGTTGCAGCCATCCTGGAGCCTTCAAAAACTAAGGACATCGATTACCTGCCATTC TTC TACTCCAGGGTCTTCACATTATCCTGGCAATTCTATGGGA ACAATACCGGAGAAGTGGTTCAC TTTGGAGACTTCACAAACAGCAGCCCAAGGTTTGGTGCCTATTGGGTTGATAAAAGCCGGATTAGGGGTGCATTTCTTGAAGGTGGAAGTCGAGAAGAATACGAGGCGATATCGAATGTTGTTCGGCGTAAAGCTAAGGTTATAAACATTGCTGAACTTGAAAAGCA AGGTCTGATGTTTGCCATTCAAGAAAGCCAGAAGGACTTGCCTGATGGTGGGCTTGCTCTTGGTGAAAAGCCTACATATGTATGGCATGCAACGGCTGGTGTCATTGCAGCTGCGTCCATTGCTGCATTTGGTTATTGGTACGGCAGGAAACGCCGTAGGTGGTGAAAAA TCTGGGAGCGACTCATTCCTTTTGCAAATTCATCGTCTCCTGTGCCTACATAACTGATGGACTAAAGTTACTCAGAGAAAAGTCCTGTATAACCTGTATCAGAGAAAAAAATCATGTACAATCTGTATGAAAGTATCATCTTTGTA CCAAATGTAAACAAATACACAGAT CCCATAATATATATTGTTTAATGAAATGGTA ]
[+] EMBL CB619336 [ AGTGATAACCGCTGATGTAAGGATGAAGACATTGCTTACAGCCACTGGAGAAACTATCAGCTATAAGAATCTTATCATTGCGACCGGTGCTCGGGCTTTGAAGCTGGAAGAGTTTGGAATCAGTGGATCAGATGCTTCGAACATATGTTATTTGCGCAATCTTGATGATGCGGATAAGTTAGTGAATGTGATGAAATCATGTCCTGGTGGAAATGCTGTCGTCATTGGTGGTGGCTATATAGGAATGGAGTGCGCAGCAGCATTGGTTACTAATAGGATAAAAGTAACCATGGTCTTCCCTGAAAGCCACTGCATGGCCCGTCTATTTACACCAAAAATTGCAGAATATTATGAGAACTATTACACTTCAAAAGGTGTTACCTTTGTCAAAGGAACTGTGCTTACATCCTTTGAAAAAGATTCGACAGGGGAGGTGACTTCAGTAATCCTGAAAGATGGTAAACCCCTTCCTGCCGATATGGTTGTGGTTGGTATTGGCA ]
[+] EMBL CB621842 [ AGTGATAACCGCTGATGTAAGGATGAAGACATTGCTTACAGCCACTGGAGAAACTATCAGCTATAAGAATCTTATCATTGCGACCGGTGCTCGGGCTTTGAAGCTGGAAGAGTTTGGAATCAGTGGATCAGATGCTTCGAACATATGTTATTTGCGCAATCTTGATGATGCGGATAAGTTAGTGAATGTGATGAAATCATGTCCTGGTGGAAATGCTGTCGTCATTGGTGGTGGCTATATAGGAATGGAGTGCGCAGCAGCATTGGTTACTAATAGGATAAAAGTAACCATGGTCTTCCCTGAAAGCCACTGCATGGCCCGTCTATTTACACCAAAAATTGCAGAATATTATGAGAACTATTACACTTCAAAAGGGGTTAC ]
[+] EMBL AK062096 [ AGTTTGGAATCAGTGGATCAGATGCTTCGAACATATGTTATTTGCGCAATCTTGATGATGCGGATAAGTTAGTGAATGTGATGAAATCATGTCCTGGTGGAAATGCTGTCGTCATTGGTGGTGGCTATATAGGAATGGAGTGCGCAGCAGCATTGGTTACTAATAGGATAAAAGTAACCATGGTCTTCCCTGAAAGCCACTGCATGGCCCGTCTATTTACACCAAAAATTGCAGAATATTATGAGAACTATTACACTTCAAAAGGTGTTACCTTTGTCAAAGGAACTGTGCTTACATCCTTTGAAAAAGATTCGACAGGGAAGGTGACTTCAGTAATCCTGAAAGATGGTAAACACCTTCCTGCCGATATGGTTGTGGTTGGTATTGGCATCCGTGCAAGCACTGGTCTTTTTGAAGGTCAGCTGTTGAT GGAGCAAGGTGGGATAAAGGTAAACGGACAAATGTTAACAAGCGATGGTTCTGTATATGCCGTTGGCGATGTTGCTGCCTTCCCTATCAAGCTCTTTGATGGTGTTATACGACGGCTTGAGCATGTTGACTCAGCTCGCAGAACAGCGAGACATGCTGTTGCAGCCATCCTGGAGCCTTCAAAAACTAAGGACATCGATTACCTGCCATTC TTC TACTCCAGGGTCTTCACATTATCCTGGCAATTCTATGGGA ACAATACCGGAGAAGTGGTTCAC TTTGGAGACTTCACAAACAGCAGCCCAAGGTTTGGTGCCTATTGGGTTGATAAAAGCCGGATTAGGGGTGCATTTCTTGAAGGTGGAAGTCGAGAAGAATACGAGGCGATATCGAATGTTGTTCGGCGTAAAGCTAAGGTTATAAACATTGCTGAACTTGAAAAGCA AGGTCTGATGTTTGCCATTCAAGAAAGCCAGAAGGACTTGCCTGATGGTGGGCTTGCTCTTGGTGAAAAGCCTACATATGTATGGCATACAACGGCTGGTGTCATTGCAGCTGCGTCCATTGCTGCATTTGGTTATTGGTACGGCAGGAAACGCCGTAGGTGGTGAAAAA TCTGGGAGCGACTCATTCCTTTTGCAAATTCATCGTCTCCTGTGCCTACATAACTGATGGACTAAAGTTACTCAGAGAAAAGTCCTGTATAACCTGTATCAGAGAAAAAAATCATGTACAATCTGTATGAAAGTATCATCTTTGTA CCAAATGTAAACAAATACACAGAT CCCATAATATATA ]
[-] EMBL CB632065 [ TGATGGGAGCAAGGTGGGATAAAGGTAAACGGACAAATGTTAACAAGCGATGGTTCTGTATATGCCGTTGGCGATGTTGCTGCCTTCCCTATCAAGCTCTTTGATGGTGTTATACGACGGCTTGAGCATGTTGACTCAGCTCGCAGAACAGCGAGACATGCTGTTGCAGCCATCCTGGAGCCTTCAAAAACTAAGGACATCGATTACCTGCCATTC TTC TACTCCAGGGTCTTCACATTATCCTGGCAATTCTATGGGA ACAATACCGGAGAAGTGGTTCAC TTTGGAGACTTCACAAACAGCAGCCCAAGGTTTGGTGCCTATTGGGTTGATAAAAGCCGGATTAGGGGTGCATTTCTTGAAGGTGGAAGTCGAGAAGAATACGAGGCGATATCGAATGTTGTTCGGCGTAAAGCTAAGGTTATAAACATTGCTGAACTTGAAAAGCA AGGTCTGATGTTTGCCATTCAAGAAAGCCAGAAGGACTTGCCTGATGGTGGGCTTGCTCTTGGTGAAAAGCCTACATATGTATGGCATGCAACGGCTGGTGTCATTGCAGCTGCGTCCATTGCTGCATTTGGTTATTGGTACGGCAGGAAACGCCGTAGGTGGTGAAAAA TCTGGGAGCGACTCATTCCTTTTGCATATTCATCGTCTCCTGTGCCTACATAACTGATGGACTAAAGTTACTCAGAGAAAAGTCCTGTATAACCTGTATCAGAGAAAAAAATCATGTACAATCTGTATGAAAGTATCATCTTTGTA CCAAATGTAAACAAATACACAGAT CCCATAATATATAT ]
[-] EMBL CB643199 [ GGTGGGATAAAAGTAAACGGACAAATGTTAACAAGCGATGGTTCTGTATATGCCGTTGGCGATGTTGCTGCCTTCCCTATCAAGCTCTTTGATGGTGTTATACGACGGCTTGAGCATGTTGACTCAGCTCGCAGAACAGCGAGACATGCTGTTGCAGCCATCCTGGAGCCTTCAAAAACTAAGGACATCGATTACCTGCCATTC TTC TACTCCAGGGTCTTCACATTATCCTGGCAATTCTATGGGA ACAATACCGGAGAAGTGGTTCAC TTTGGAGACTTCACAAACAGCAGCCCAAGGTTTGGTGCCTATTGGGTTGATAAAAGCCGGATTAGGGGTGCATTTCTTGAAGGTGGAAGTCGAGAAGAATACGAGGCGATATCGAATGTTGTTCGGCGTAAAGCTAAGGTTATAAACATTGCTGAACTTGAAAAGCA AGGTCTGATGTTTGCCATTCAAGAAAGCCAGAAGGACTTGCCTGATGGTGGGCTTGCTCTTGGTGAAAAGCCTACATATGTATGGCATGCAACGGCTGGTGTCATTGCAGCTGCGTCCATTGCTGCATTTGGTTATTGGTACGGCAGGAAACGCCGTAGGTGGTGAAAAA TTTGGGAGCGACTCATTCCTTTTGCAAATTCATTGTTTCCTGTGCCTACATAACTGATGGACTAAAGTTACTCAGAGAAAAGTCCTGTATAACCTGTATCAGAGAAAAAAATCATGTACAATCTGTATGAAAGTATCATCTTTGTA CCAAATGTAAACAAATACACAGAT CCCATAATATATATTGTTTAATGAAATGGTATGCTGTTATGAAAAAAAAAAAAGA]
[-] EMBL CB683536 [ AAACGGACAAATGTTAACAAGCGATGGTTCTGTATATGCCGTTGGCGATGTTGCTGCCTTCCCTATCAAGCTCTTTGATGGTGTTATACGACGGCTTGAGCATGTTGACTCAGCTCGCAGAACAGCGAGACATGCTGTTGCAGCCATCCTGGAGCCTTCAAAAACTAAGGACATCGATTACCTGCCATTC TTC TACTCCAGGGTCTTCACATTATCCTGGCAATTCTATGGGA ACAATACCGGAGAAGTGGTTCAC TTTGGAGACTTCACAAACAGCAGCCCAAGGTTTGGTGCCTATTGGGTTGATAAAAGCCGGATTAGGGGTGCATTTCTTGAAGGTGGAAGTCGAGAAGAATACGAGGCGATATCGAATGTTGTTCGGCGTAAAGCTAAGGTTATAAACATTGCTGAACTTGAAAAGCA AGGTCTGATGTTTGCCATTCAAGAAAGCCAGAAGGACTTGCCTGATGGTGGGCTTGCTCTTGGTGAAAAGCCTACATATGTATGGCATGCAACGGCTGGTGTCATTGCAGCTGCGTCCATTGCTGCATTTGGTTATTGGTACGGCAGGAAACGCCGTAGGTGGTGAAAAA TCTGGGAGCGACTCATTCCTTTTGCAAATTCATCGTCTCCTGTGCCTACATAACTGATGGACTAAAGTTACTCAGAGAAAAGTCCTGTATAACCTGTATCAGAGAAAAAAATCATGTACAATCTGTATGAAAGTATCATCTTTGTA CCAAATGTAAACAAATACACAGAT CCCATAATATAAAGTGTTTAATGAAATGGTATGC ]
[-] EMBL CB621843 [ CTTCCCTATCAAGCTCTTTGATGGTGTTATACGACGGCTTGAGCATGTTGACTCAGCTCGCAGAACAGCGAGACATGCTGTTGCAGCCATCCTGGAGCCTTCAAAAACTAAGGACATCGATTACCTGCCATTC TTC TACTCCAGGGTCTTCACATTATCCTGGCAATTCTATGGGA ACAATACCGGAGAAGTGGTTCAC TTTGGAGACTTCACAAACAGCAGCCCAAGGTTTGGTGCCTATTGGGTTGATAAAAGCCGGATTAGGGGTGCATTTCTTGAAGGTGGAAGTCGAGAAGAATACGAGGCGATATCGAATGTTGTTCGGCGTAAAGCTAAGGTTATAAACATTGCTGAACTTGAAAAGCA AGGTCTGATGTTTGCCATTCAAGAAAGCCAGAAGGACTTGCCTGATGGTGGGCTTGCTCTTGGTGAAAAGCCTACATATGTATGGCATGCAACGGCTGGTGTCATTGCAGCTGCGTCCATTGCTGCATTTGGTTATTGGTACGGCAGGAAACGCCGTAGGTGGTGAAAAA TTTGGGAGCGACTCATTCCTTTTGCAAATTCATCGTCTCCTGTGCCTACATAACTGATGGATTAAAGTTACTCAGAGAAAAGTCCTGTATAACCTGTATCAGAGAAAAAAATCATGTACAATCTGTATGAAAGTATCATCTTTGTA CCAAATGTAAACAAATACACAGGT CCCATAATATATAT ]
[-] EMBL CB629985 [ GCTCTTTGATGGTGTTATACGACGGCTTGAGCATGTTGACTCAGCTCGCAGAACAGCGAGACATGCTGTTGCAGCCATCCTGGAGCCTTCAAAAACTAAGGACATCGATTACCTGCCATTC TTT TACTCCAGGGTCTTCACATTATCCTGGCAATTTTATGGGA ACAATACCGGAGAAGTGGTTCAC TTTGGAGACTTCACAAACAGCAGCCCAAGGTTTGGTGCCTATTGGGTTGATAAAAGCCGGATTAGGGGTGCATTTTTTGAAGGTGGAAGTCGAGAAGAATACGAGGCGATATCGAATGTTGTTCGGCGTAAAGCTAAGGTTATAAACATTGCTGAACTTGAAAAGCA AGGTTTGATGTTTGCCATTCAAGAAAGCCAGAAGGACTTGCCTGATGGTGGGCTTGCTCTTGGTGAAAAGCCTACATATGTATGGCATGCAACGGCTGGTGTCATTGCAGCTGCGTCCATTGCTGCATTTGGTTATTGGTACGGCAGGAAACGCCGTAGGTGGTGAAAAA TTTGGGAGCGACTCATTCCTTTTGCATATTCATCGTTTCCTGTGCCTACATAACTGATGGACTAAAGTTACTCAGAGAAAAGTCCTGTATAACCTGTATCAGAGAAAAAAATCATGTACAATCTGTATGAAAGTATCATCTTTGTA CCAAATGTAAACAAATACACAGAT CCCATAATATATATTGTTTAATGAAATGGTAT ]
[-] EMBL CB619337 [ ACTCAGCTCGCAGAACAGCGAGACATGCTGTTGCAGCCATCCTGGAGCCTTCAAAAACTAAGGACATCGATTACCTGCCATTC TTT TACTCCAGGGTCTTCACATTATCCTGGCAATTCTATGGGA ACAATACCGGAGAAGTGGTTCAC TTTGGAGACTTCACAAACAGCAGCCCAAGGTTTGGTGCCTATTGGGTTGATAAAAGCCGGATTAGGGGTGCATTTCTTGAAGGTGGAAGTCGAGAAGAATACGAGGCGATATCGAATGTTGTTCGGCGTAAAGCTAAGGTTATAAACATTGCTGAACTTGAAAAGCA AGGTTTGATGTTTGCCATTCAAGAAAGCCAGAAGGACTTGCCTGATGGTGGGCTTGCTCTTGGTGAAAAGCCTACATATGTATGGCATGCAACGGCTGGTGTCATTGCAGCTGCGTCCATTGCTGCATTTGGTTATTGGTACGGCAGGAAACGCCGTAGGTGGTGAAAAA TTTGGGAGGGACTCATTCCTTTTGCAAATTCATCGTCTCCTGTGCCTACATAACTGATGGATTAAAGTTACTCAGAGAAAAGTCCTGTATAACCTGTATCAGAGAAAAAAATCATGTACAATCTGTATGAAAGTATCATCTTTGTA CCAAATGTAAACAAATACACAGAT CCCATAATATATATTGTTTAATGAAATGGTAT ]
[+] EMBL BQ909125 [ AAAAACTAAGGACATCGATTACCTGCCATTCGTTCGTACTCCAGGGTCTTCACATTATCCTGGCAATTCTATGGGA ACAATACCGGAGAAGTGGTTCAC TTTGGAGACTTCACAAACAGCAGCCCAAGGTTTGGTGCCTATTGGGTTGATAAAAGCCGGATTAGGGGTGCATTTCTTGAAGGTGGAAGTCGAGAAGAATACGAGGCGATATCGAATGTTGTTCGGCGTAAAGCTAAGGTTATAAACATTGCTGAACTTGAAAAGCA AGGTCTGATGTTTGCCATTCAAGAAAGCCAGAAGGACTTGCCTGATGGTGGGCTTGCTCTTGGTGAAAAGCCTACATATGTATGGCATGCAACGGCTGGTGTCATTGCAGCTGCGTCCATTGCTGCATTTGGTTATTGGTACGGCAGGAAACGCCGTAGGTGGTGAAAAA TCTGGGAGCGACTCATTCC TTCGCAAATTCATCGTCTCCTGTGCCTACATAACTGATGGATTAAAGTTACTCAGAGAAAAGTCCTGTATAACCTGTATCAGAGAAAAAAATCATGTACAATCTGTATGAAAGTATCATCTTTGTA CCAAATGTAAACAAATACACCGAT CCCATAATATATATTGTTTAATGAAAaaa ]
[+] EMBL BM418801 [ atgGGGACACAATACCGGAGAA TGTTTCACATTTGGAGACTTCACCAACAGCAGCCCCA GTTTGGTGCCTATTGGGTTGATAAAACCCGGATTAGGGGTGCATTTCTTGAAGGTGGAAGTCGAGAAGAATACGAGGCGATATCGAATGTTGTTCGGCGTAAAGCTAAGGTTATAAACNTTGCTGAACTTGAAAAGCACAGGTCTGATGTTTGCCATTCAAGAAAGCCAGAAGGACTTGCCTGATGGTGGGCTTGCTCTTGGTGAAAAGCCTACATATGTATGGCATGCAACGGCTGGTGTCATTGCAGCTGCGTCCATTGCTGCATTTGGTTATTGGTACGGCAGGAAACGCCGTAGGTGGTGAAAAATTCTGGGAGCGACTCATTCCTTTTGCAAATTCATCGTCTCCTGTGCCTACATAACTGATGGATTAAAGTTACTCAGAGAAAAGTCCTGTATAACCTGTATCAGAGAAAAAAATCATGTACAATCTGTATGAAAGTATCATCTTTGTACCCAAATGTAAACAAATACACAGATGCCCATAATATATATTGTTTAA ]
consensusID : consensus_13769#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 670 fasta sequence
[TGCTGTTGCAGCCATCCTGGAGCCTTCAAAAACTAAGGACATCGATTACCTGCCATTCTTTTACTCCAGGGTCTTCACATTATCCTGGCAATTCTATGGGAACAATACCGGAGAAGTGGTTCACTTTGGAGACTTCACAAACAGCAGCCCAAGGTTTGGTGCCTATTGGGTTGATAAAAGCCGGATTAGGGGTGCATTTCTTGAAGGTGGAAGTCGAGAAGAATACGAGGCGATATCGAATGTTGTTTGGCGTAAAGCTAAGGTTATAAACATTGCTGAACTTGAAAAGCAAGGTTTGATGTTTGCCCTTCAAGAAAGCCAGAAGGACTTGCCTGATGGTGGGCTTGCTCTTGGTGAAAAGCCTACATATGTATGGCATGCAACGGCTGGTGTCATTGCAGCTGCGTCCATTGCTGCATTTGGTTATTGGTACGGCAGGAAACCCCGTAGGTGGTGAAAAATTTGGGAGCGACTCATTCCTTTTGCAAATTTATCGTTTCCTGTGCCTACATAACTGATGGATTAAAGTTACTCAGAGAAAAGTCCTGTATAACCTGTATCAGAGAAAAAAATCATGTACAATCTGTATGAAAATATCATCTTTGTTCCCAATGTAAACAAATACCCAGATCCCCATAATATATATTGTTTAATGAAAAAAAAAAAAAAA]
[-] EMBL CA759513 [TGCTGTTGCAGCCATCCTGGAGCCTTCAAAAACTAAGGACATCGATTACCTGCCATTCTTTTACTCCAGGGTCTTCACATTATCCTGGCAATTCTATGGGAACAATACCGGAGAAGTGGTTCACTTTGGAGACTTCACAAACAGCAGCCCAAGGTTTGGTGCCTATTGGGTTGATAAAAGCCGGATTAGGGGTGCATTTCTTGAAGGTGGAAGTCGAGAAGAATACGAGGCGATATCGAATGTTGTTTGGCGTAAAGCTAAGGTTATAAACATTGCTGAACTTGAAAAGCAAGGTTTGATGTTTGCCCTTCAAGAAAGCCAGAAGGACTTGCCTGATGGTGGGCTTGCTCTTGGTGAAAAGCCTACATATGTATGGCATGCAACGGCTGGTGTCATTGCAGCTGCGTCCATTGCTGCATTTGGTTATTGGTACGGCAGGAAACCCCGTAGGTGGTGAAAAATTTGGGAGCGACTCATTCCTTTTGCAAATTTATCGTTTCCTGTGCCTACATAACTGATGGATTAAAGTTACTCAGAGAAAAGTCCTGTATAACCTGTATCAGAGAAAAAAATCATGTACAATCTGTATGAAAATATCATCTTTGTTCCCAATGTAAACAAATACCCAGATCCCCATAATATATATTGTTTAATGAAAAAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_13769#0 GGCGGCGGCGTGGCCGCCGGCTACGCGGCGCTCGAGTTCGCCCGCCGCGGCGGCTACTCC 60
consensus_13769#1 ------------------------------------------------------------
consensus_13769#0 CGCGGCGAGCTCTGCATCATCTCCGAAGAGACGGTTGCTCCTTATGAACGTCCGGCACTA 120
consensus_13769#1 ------------------------------------------------------------
consensus_13769#0 AGCAAAGGCTATTTACTCCCAGAAGGTGCCGCTCGTCTTCCAGGATTTCATACCTGCGTT 180
consensus_13769#1 ------------------------------------------------------------
consensus_13769#0 GGTGCCAATGATGAATTACTGACGGCAAAATGGTACAAAGAAAATGGTATTGAACTTGTT 240
consensus_13769#1 ------------------------------------------------------------
consensus_13769#0 CTCGGAACAAAAGTGATAACCGCTGATGTAAGGATGAAGACATTGCTTACAGCCACTGGA 300
consensus_13769#1 ------------------------------------------------------------
consensus_13769#0 GAAACTATCAGCTATAAGAATCTTATCATTGCGACCGGTGCTCGGGCTTTGAAGCTGGAA 360
consensus_13769#1 ------------------------------------------------------------
consensus_13769#0 GAGTTTGGAATCAGTGGATCAGATGCTTCGAACATATGTTATTTGCGCAATCTTGATGAT 420
consensus_13769#1 ------------------------------------------------------------
consensus_13769#0 GCGGATAAGTTAGTGAATGTGATGAAATCATGTCCTGGTGGAAATGCTGTCGTCATTGGT 480
consensus_13769#1 ------------------------------------------------------------
consensus_13769#0 GGTGGCTATATAGGAATGGAGTGCGCAGCAGCATTGGTTACTAATAGGATAAAAGTAACC 540
consensus_13769#1 ------------------------------------------------------------
consensus_13769#0 ATGGTCTTCCCTGAAAGCCACTGCATGGCCCGTCTATTTACACCAAAAATTGCAGAATAT 600
consensus_13769#1 ------------------------------------------------------------
consensus_13769#0 TATGAGAACTATTACACTTCAAAAGGTGTTACCTTTGTCAAAGGAACTGTGCTTACATCC 660
consensus_13769#1 ------------------------------------------------------------
consensus_13769#0 TTTGAAAAAGATTCGACAGGGAAGGTGACTTCAGTAATCCTGAAAGATGGTAAACACCTT 720
consensus_13769#1 ------------------------------------------------------------
consensus_13769#0 CCTGCCGATATGGTTGTGGTTGGTATTGGCATCCGTGCAAGCACTGGTCTTTTTGAAGGT 780
consensus_13769#1 ------------------------------------------------------------
consensus_13769#0 CAGCTGTTGATGGAGCAAGGTGGGATAAAGGTAAACGGACAAATGTTAACAAGCGATGGT 840
consensus_13769#1 ------------------------------------------------------------
consensus_13769#0 TCTGTATATGCCGTTGGCGATGTTGCTGCCTTCCCTATCAAGCTCTTTGATGGTGTTATA 900
consensus_13769#1 ------------------------------------------------------------
consensus_13769#0 CGACGGCTTGAGCATGTTGACTCAGCTCGCAGAACAGCGAGACATGCTGTTGCAGCCATC 960
consensus_13769#1 --------------------------------------------TGCTGTTGCAGCCATC 16
****************
consensus_13769#0 CTGGAGCCTTCAAAAACTAAGGACATCGATTACCTGCCATTCTTCTACTCCAGGGTCTTC 1020
consensus_13769#1 CTGGAGCCTTCAAAAACTAAGGACATCGATTACCTGCCATTCTTTTACTCCAGGGTCTTC 76
******************************************** ***************
consensus_13769#0 ACATTATCCTGGCAATTCTATGGGAACAATACCGGAGAAGTGGTTCACTTTGGAGACTTC 1080
consensus_13769#1 ACATTATCCTGGCAATTCTATGGGAACAATACCGGAGAAGTGGTTCACTTTGGAGACTTC 136
************************************************************
consensus_13769#0 ACAAACAGCAGCCCAAGGTTTGGTGCCTATTGGGTTGATAAAAGCCGGATTAGGGGTGCA 1140
consensus_13769#1 ACAAACAGCAGCCCAAGGTTTGGTGCCTATTGGGTTGATAAAAGCCGGATTAGGGGTGCA 196
************************************************************
consensus_13769#0 TTTCTTGAAGGTGGAAGTCGAGAAGAATACGAGGCGATATCGAATGTTGTTCGGCGTAAA 1200
consensus_13769#1 TTTCTTGAAGGTGGAAGTCGAGAAGAATACGAGGCGATATCGAATGTTGTTTGGCGTAAA 256
*************************************************** ********
consensus_13769#0 GCTAAGGTTATAAACATTGCTGAACTTGAAAAGCAAGGTCTGATGTTTGCCATTCAAGAA 1260
consensus_13769#1 GCTAAGGTTATAAACATTGCTGAACTTGAAAAGCAAGGTTTGATGTTTGCCCTTCAAGAA 316
*************************************** *********** ********
consensus_13769#0 AGCCAGAAGGACTTGCCTGATGGTGGGCTTGCTCTTGGTGAAAAGCCTACATATGTATGG 1320
consensus_13769#1 AGCCAGAAGGACTTGCCTGATGGTGGGCTTGCTCTTGGTGAAAAGCCTACATATGTATGG 376
************************************************************
consensus_13769#0 CATGCAACGGCTGGTGTCATTGCAGCTGCGTCCATTGCTGCATTTGGTTATTGGTACGGC 1380
consensus_13769#1 CATGCAACGGCTGGTGTCATTGCAGCTGCGTCCATTGCTGCATTTGGTTATTGGTACGGC 436
************************************************************
consensus_13769#0 AGGAAACGCCGTAGGTGGTGAAAAATCTGGGAGCGACTCATTCCTTTTGCAAATTCATCG 1440
consensus_13769#1 AGGAAACCCCGTAGGTGGTGAAAAATTTGGGAGCGACTCATTCCTTTTGCAAATTTATCG 496
******* ****************** **************************** ****
consensus_13769#0 TCTCCTGTGCCTACATAACTGATGGACTAAAGTTACTCAGAGAAAAGTCCTGTATAACCT 1500
consensus_13769#1 TTTCCTGTGCCTACATAACTGATGGATTAAAGTTACTCAGAGAAAAGTCCTGTATAACCT 556
* ************************ *********************************
consensus_13769#0 GTATCAGAGAAAAAAATCATGTACAATCTGTATGAAAGTATCATCTTTGTACCAAATGTA 1560
consensus_13769#1 GTATCAGAGAAAAAAATCATGTACAATCTGTATGAAAATATCATCTTTGTTCCCAATGTA 616
************************************* ************ ** ******
consensus_13769#0 AACAAATACACAGATCCC-ATAATATATATTGTTTAATGAAATGGTATGCTGTTATGAAA 1619
consensus_13769#1 AACAAATACCCAGATCCCCATAATATATATTGTTTAATGAAA---------------AAA 661
********* ******** *********************** ***
consensus_13769#0 AAAAAAAAAGA 1630
consensus_13769#1 AAAAAAAAA-- 670
*********
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||