cluster # 13776

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Oryza sativa
cluster # 13776 cluster # 13776 Sequences # 14 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_13776#0 length = 1725 sequences # 11
consensus_13776#1 length = 569 sequences # 1

consensus_13776#2 length = 248 sequences # 1
consensus_13776#3 length = 158 sequences # 1

consensusID : consensus_13776#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 1725
fasta sequence

                              [TCCTGCACAGCACAGCCTGCACTACACCAACCAACCACCAAAACCCTTCTTCCCCCATCGAAAGCCCATCTCACTCTCCTCCCCGCCGCCGCCGCCAAGCCTGCGCGGCGCCCTCCCCTCCCGATCGCCATGGCCTCCATGGCGTTCACCGCCGCCAAGTTCCTCCCTGCCACGGCGCCCACGCACCTCGACTCCTCCCCGCGCCTCTCCCCGCCCCGCGCCGGTAGCCTCTCCTTCTCCCCGCTCTCCTCGTCGTCGTCCGCCCTCCTCCTCCGCCTCCGATCCCCGTCCCCGTCTGGTCCGTCTGGGCCAGGTGGCAGGCTGCCCCCGCCGCCGCGCTCCTACGGCGGCGGCGGCGGATCTGGCGACGCCGCGGATTCCGGGGGCAGCAGCGGCGGCATCCTCGGCATCTTCCTCGCCGGGTGGGCGGCACGCGTCGCCGCGGATCCGCAGTTCCCGTTCAAGGTGCTCATGGAGGAGCTCGTCGGCGTCAGCGCCTGCGTGCTCGGCGACATGGCGTCCCGCCCGAACTTCGGGCTCAACGAGCTCGAC-TTCGTCTTCTCCACCCTCGT-CGTCGGATCCATCCTCAACTTCGTCCTCATGTACCTCCTCGCGCCCACCGCCGGCGCCTC-GGCCGCCGCGTCCGC-CGCCGCG-TCGGG-GC-TCCCCAGCCACATGTTCGAGGCCGG-CGCCT-ACTCCTT-GGGCTCCCGCGTCGCGACGCTGCTATCCAAGGGCGCCACGTTCGCCGCCGTGGGGTTCGCCGCGGGGCTCGCCGGCACCGCGATCTCCAACGGCCTCATCTCGCTGCGGAAACGCATGGACCCGGCGTTCGAGACCCCGAACAAGGCGCCGCCCACGCTGCTCAACGCCGCTACCTGGGCGATCCACAT-GGGGGTCAGCAGCAACCTGCGGTACCAGACGCTGAACGGCGTCGAGTACCTGCTCGCCAACGCCGCGCCGCCGTCGGTGTTCAAGGTGTCCGTCGTTGCTCTCCGGTGCATAAACAACGTGCTGGGTGGCATGTCCTTCGTGCTACTCGCGAGGTTAACCGGGTCGCAGAAGTCTGATGCGCCGGCCGCCTCGGCGAC-TGCGGAGGAGGAGAAGGAGAGGTTGATAGCCGTGGGCAATGAC-ATTGCCGCAGACGCCGTCGGCGC-GGGAAGGGATGGAGAGGGTAAG-TGAGTGGATGCAT-AATGCATATGCTTGCTTGC-TTGCATCGCTCAAGCTTCGTTTGCGGCTTCTTGGACATGGGCCAAGAAAGCTCTGTAGATGATAAGCCGGTTGGCTTGGCAATAAGGAGTGAGGCTTGAAACAATTTGTTC-AGTCCATCTTTGGTGTTCTTGGTTTAATCTGTCGACATGCTTAGTTGATCTTAGAATAAAGCTTTACCTTTTTTCT-GTTGCTC-GTTTTGGTCACTGGCCTAACCGGGGGGATTACTTTGCGCGCGGTAACTTCAATTGCTTTGTTTGCATGCAATTCTGTGATCCGATCAGACCAACATTGTAGATGTAAGGACTGAACAAATGAAAATCTAAGCGTTGGGGGGTTAGTGATGTACAACTCAGATAAAATTCTCTAGTGTTTGCATAAGTGAATTGCTGTTTGTGTGTTTAAGTGCAGATAATTATGTCTGCACAGCCAGAACCAGACTTACCTCAGGTCTTCCACTGTGGCAATTCGAGTTTTACCTTTTCCTTCATAAACCATATCTGAAATTGGCTGTTTAAAAAA]

[+] EMBL AK121582             [TCCTGCACAGCACAGCCTGCACTACACCAACCAACCACCAAAACCCTTCTTCCCCCATCGAAAGCCCATCTCACTCTCCTCCCCGCCGCCGCCGCCAAGCCTGCGCGGCGCCCTCCCCTCCCGATCGCCATGGCCTCCATGGCGTTCACCGCCGCCAAGTTCCTCCCTGCCACGGCGCCCACGCACCTCGACTCCTCCCCGCGCCTCTCCCCGCCCCGCGCCGGTAGCCTCTCCTTCTCCCCGCTCTCCTCGTCGTCGTCCGCCCTCCTCCTCCGCCTCCGATCCCCGTCCCCGTCTGGTCCGTCTGGGCCAGGTGGCAGGCTGCCCCCGCCGCCGCGCTCCTACGGCGGCGGCGGCGGATCTGGCGACGCCGCGGATTCCGGGGGCAGCAGCGGCGGCATCCTCGGCATCTTCCTCGCCGGGTGGGCGGCACGCGTCGCCGCGGATCCGCAGTTCCCGTTCAAGGTGCTCATGGAGGAGCTCGTCGGCGTCAGCGCCTGCGTGCTCGGCGACATGGCGTCCCGCCCGAACTTCGGGCTCAACGAGCTCGAC TTCGTCTTCTCCACCCTCGT CATCGGATCCATCCTCAACTTCGTCCTCATGTACCTCCTCGCGCCCACCGCCGGCGCCTC GGCCGCCGCGTCCGC CGCCGCG TCGGG GC TCCCCAGCCACATGTTCGAGGCCGG CGCCT ACTCCTT GGGCTCCCGCGTCGCGACGCTGCTATCCAAGGGCGCCACGTTCGCCGCCGTGGGGTTCGCCGCGGGGCTCGCCGGCACCGCGATCTCCAACGGCCTCATCTCGCTGCGGAAACGCATGGACCCGGCGTTCGAGACCCCGAACAAGGCGCCGCCCACGCTGCTCAACGCCGCTACCTGGGCGATCCACAT GGGGGTCAGCAGCAACCTGCGGTACCAGACGCTGAACGGCGTCGAGTACCTGCTCGCCAACGCCGCGCCGCCGTCGGTGTTCAAGGTGTCCGTCGTTGCTCTCCGGTGCATAAACAACGTGCTGGGTGGCATGTCCTTCGTGCTACTCGCGAGGTTAACCGGGTCGCAGAAGTCTGATGCGCCGGCCGCCTCGGCGAC TGCGGAGGAGGAGAAGGAGAGGTTGATAGCCGTGGGCAATGAC ATTGCCGCAGACGCCGTCGGCGC GGGAAGGGATGGAGAGGGTAAG TGAGTGGATGCAT AATGCATATGCTTGCTTGC TTGCATCGCTCAAGCTTCGTTTGCGGCTTCTTGGACATGGGCCAAGAAAGCTCTGTAGATGATAAGCCGGTTGGCTTGGCAATAAGGAGTGAGGCTTGAAACAATTTGTTC AGTCCATCTTTGGTGTTCTTGGTTTAATCTGTCGACATGCTTAGTTGATCTTAGAATAAAGCTTTACCT                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CA753748             [                                                                                                                            TCGCCATGGCCTCCATGGCGTTCACCGCCGCCAAGTTCCTCCCTGCCACGGCGCCCACGCACCTCGACTCCTCCCCGCGCCTCTCCCCGCCCCGCGCCGGTAGCCTCTCCTTCTCCCCGCTCTCCTCGTCGTCGTCCGCCCTCCTCCTCCGCCTCCGATCCCCGTCCCCGTCTGGTCCGTCTGGGCCAGGTGGCAGGCTGCCCCCGCCGCCGCGCTCCTACGGCGGCGGCGGCGGATCTGGCGACGCCGCGGATTCCGGGGGCAGCAGCGGCGGCATCCTCGGCATCTTCCTCGCCGGGTGGGCGGCACGCGTCGCCGCGGATCCGCAGTTCCCGTTCAAGGTGCTCATGGAGGAGCTCGTCGGCGTCAGCGCCTGCGTGCTCGGCGACATGGCGTCCCGCCCGAACTTCGGGCTCAACGAGCTCGAC TTCGTCTTCTCCACCCTCGT CGTCGGATCCATCCTCAACTTCGTCCTCATGTACCTCCTCGCGCCCACCGCCGGAGCCTC GGACGCCGCGTCCGC CGCCGCG TCGGA GC TCCCCA CCACATGTTCGAGACCGG CGCCT ACTCCTT GGGCT CCGCGTCGCGACGCTGCTATCCTAGGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CB657122             [                                                                                                                                                   ACCGCCGCCAAGTTCCTCCCTGCCACGGCGCCCACGCACCTCGACTCCTCCCCGCGCCTCTCCCCGCCCCGCGCCGGTAGCCTCTCCTTCTCCCCGCTCTCCTCGTCGTCGTCCGCCCTCCTCCTCCGCCTCCGATCCCCGTCCCCGTCTGGTCCGTCTGGGCCAGGTGGCAGGCTGCCCCCGCCGCCGCGCTCCTACGGCGGCGGCGGCGGATCTGGCGACGCCGCGGATTCCGGGGGCAGCAGCGGCGGCATCCTCGGCATCTTCCTCGCCGGGTGGGCGGCACGCGTCGCCGCGGATCCGCAGTTCCCGTTCAAGGTGCTCATGGAGGAGCTCGTCGGCGTCAGCGCCTGCGTGCTCGGCGACATGGCGTCCCGCCCGAACTTCGGGCTCAACGAGCTCGAC TTCGTCTTCTCCACCCTCGT CGTCGGATCCATCCTCAACTTCGTCCTCATGTACCTCCTCGCGCCCACCGCCGGCGCCTC GGCCGCCGCGTCCGC CGCCGCG TCGGG GC TCCCCAGCCACATGTTCGAGGCCGG CGCCT ACTCCTT GGGCTCCCGCGTCGCGACGCTGCTATCCAAGGGCGCCACGTTCGCCGCCGTGGGGTTCGCCGCGGGGCTCGCCGGCACCGCGATCTCCAACGGCCTCATCTCGCTGCGGAAACGCATGGACCCGGCGTTCGAGACCCCGAACAAGGCGCCGCCCACGCTGCTCAACGCCGCTACCTGGGCGATCNACATGGGGGGTCAGCAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL OSR21581B            [                                                                                                                                                                                                                                                                                                       CTGGTCCGTCTGGGCCAGGTGGCAGGCTGCCCNCGCCGCCGCGCTCCTACGGCGGCGGCGGCGGATCTGGCGACGACGCGGATTCCGNGGGCAGCAGCGGCGGCATCCTCGGCATCTTCCTCGCCGGGTGGGCGGCACG GTCGCCGCGGATCCGCAGTTCCCGTTCAAGGTGCTCATGGAGGAGCTCGTCGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AU162539             [                                                                                                                                                                                                                                                                                                       CTGGTCCGTCTGGGCCAGGTGGCAGGCTGCCCCCGCCGCCGCGCTCCTACGGCGGCGGCGGCGGATCTGGCGACGCCGCGGATTCCGGGGGCAGCAGCGGCGGCATCCTCGGCATCTTCCTCGCCGGGTGGGCGGCACGCGTCGCCGCGGATCCGCAGTTCCCGTTCAAGGTGCTCATGGAGGAGCTCGTCGGCGTCA CGCCTGCGTGCTCGGCGACATGGCGTCCCGCCCGAACTTCGGGCTCAACGAGCTCGAC TTCGTCTTCTCCACCCTCGT CGTCGGATCCATCCTCAACTTCGTCCTCATGTACCTCCTCGCGCCCACCGCCGGCGCCTCGGGCCGCCGCGTCCGCTCGCCGCGTTCGGGNGCTTCCCCAGCCACATGTTCGAGGCCGGAGGCCTAACTCCTTGGGGTTCCCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AU032078             [                                                                                                                                                                                                                                                                                                        TGGTCCGTCTGGGCCAGGTGGCAGGCTGCCCNCGNCGCCGCGCTCCTACGGCGGCGNCGGCGGATCTGGCGACG CGCGGATTCCGGGGGCAGCAGCGGCGGCATCCTCGGCATCTTCCTCGCCGGGTGGNCGGCACG GTCGCCGCGGATCCGCAGTTCCCGTTCAAGGTGCTCATGGAGGAGCTCGTCGGCGTCA CGCCTGCGTGCTCGGCGACATNGCGTNCNG CCGAACTTCGGGCTCAACGAGCTCGACTTTCGTCTTCTCCAACCTGGTGGGTCGGATCCATCCTCAACTTCGTCntaa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CB657123             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ATGTTCGAGGCCGG CGCCT ACTCCTT GGGCTCCCGCGTCGCGACGCTGCTATCCAAGGGCGCCACGTTCGCCGCCGTGGGGTTCGCCGCGGGGCTCGCCGGCACCGCGATCTCCAACGGCCTCATCTCGCTGCGGAAACGCATGGACCCGGCGTTCGAGACCCCGAACAAGGCGCCGCCCACGCTGCTCAACGCCGCTACCTGGGCGATCCACAT GGGGGTCAGCAGCAACCTGCGGTACCAGACGCTGAACGGCGTCGAGTACCTGCTCGCCAACGCCGCGCCGCCGTCGGTGTTCAAGGTGTCCGTCGTTGCTCTCCGGTGCATAAACAACGTGCTGGGTGGCATGTCCTTCGTGCTACTCGCGAGGTTAACCGGGTCGCAGAAGTCTGATGCGCCGGCCGCCTCGGCGAC TGCGGAGGAGGAGAAGGAGAGGTTGATAGCCGTGGGCAATGAC ATTGCCGCAGACGCCGTCGGCGC GGGAAGGGATGGAGAGGGTAAG TGAGTGGATGCAT AATGCATATGCTTGCTTGC TTGCATCGCTCAAGCTTCGTTTGCGGCTTCTTGGACATGGGCCAAGAAAGCTCTGTAGATGATAAGCCGGTTGGCTTGGCAATAAGGAGTGAGGCTTGAAACAATTTGTTC AGTCCATCTTTGGTGTTCTTGGTTTAATCTGTCGACATGCTTAGTTGATCTTAGAATAAAGCTTTACCTT                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL C74394               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   AGGCGCCGCCCACGCTGCTCAACGCCGCTACCTGGGCGATCCACAT GGGGGTCAGCAGCAACCTGCGGTACCAGACGCTGAACGGCGTCGAGTACCTGCTCGCCAACGCCGCGCCGCCGTCGGTGTTCAAGGTGTCCGTCGTTGCTCTCCGGTGCATAAACAACGTGCTGGGTGGCATGTCCTTCGTGCTACTCGCGAGGTTAACCGGGTCGCAGAAGTCTGATGCGCCGGCCGCCTCGGCGACTTNCGGAGGAGGAGAAGGAGAGGTTGATAGCCGTGGGCAATGAC ATTNCCGCAGACGCCGTCGGCGCGGGGAAGGGATGGAGANGGTAAGTTGAGTGGATGCAT AATGCANATACTTGCTTGC TTGCATCGTTCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AU162485             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ataAGCCATGGGCAATNACAATTGCCGCAGANACCGTCGGCGC GGGAAGGGATGGAGAGGGTAAG TGAGTGGATGCATAAATGCATATGCTTGCTTGC TTGCATCGCTCAAGCTTCGTTTGCGGCTTCTTGGACATGGGCCAAGAAAGCTCTGTAGATGATAAGCCGGTTGGCTTGGCAATAAGGAGTGAGGCTTGAAACAATTTGTTC AGTCCATCTTTGGTGTTCTTGGTTTAATCTGTCGACATGCTTAGTTGATCTTAGAATAAAGCTTTACCTTTTTTCT GTTGCTC GTTTTGGTCACTGGCCTAACCGGGGGGATTACTTTGCGCGCGGTAACTTCAATTGCTTTGTTTGCATGCAATTCTGTGATCCGATCAGACCAACATTGTAGATGTAAGGACTGAACAAATGAAAATCTAAGCGTTGGGGGGTTAGTGATGTACAACTCAGATAAAATTCTCTAGTGTTTGCATAAGTGAATTGCTGTTTGTGTGTTTAAGTGCAGATAATTATGTCTGCACAGCCAGAACCAGACTTACCTCAGGTCTTCCACTGTGGCAATTCGAGTTTTACCTTTTCCTTCATAAACCATATCTGAAATTGGCTGTTTAAAAAA]
[+] EMBL AU032297             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ctTTGTTTGCTTTGCATCGCTCAAGCTCCGTTTGCGGCTTCTTGGACATGGGCCAAGAAANCTCTGTAGATGATAAGCCGGTTGGCTTGGCAATAAGGAGTGAGGCTTGAAACAATTTGTTCAAGTCCATCTTTGGTGTTCTTGGTTTAATCTGTCGACATGCTTAGTTGATCTTAGAATAAAGCTTTACCTTTTTTCTGGTTGCTCGGTTTTGGTCACTGGCCTAACCGGGGGGATTACTTTGCGCGCGGTAACTTCAATTGCTTTGTTTGCATGCAATTCTGTGATCCGATCAGACCAACATTGTAGATGTAAGGACTGAACAAATGAAAATCTAAGCGTTGGGGGGTTAGTGATGTACAACTCAGATAAAATTCTCTAGTGTTTGCATAAGTGAATTGCTGTTTGTGTGTTTAAGTGCAGATAATTATGTCTGCACAGCCAGAACCAGACTTACCTCAGGTCTTCCACTGTGGCAATTCGAGTTTTACCTTTTCCTTCATAAACCATATCTGAAATTGGCTGTTTAAAAAA]
[+] EMBL AU184396             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GAGTGAGGCTTGAAACAATTTGTTC AGTCCATCTTTGGTGTTCTTGGTTTAATCTGTCGACATGCTTAGTTGATCTTAGAATAAAGCTTTACCTTTTTTCT GTTGCTC GTTTTGGTCACTGGCCTAACCGGGGGGATTACTTTGCGCGCGGTAACTTCAATTGCTTTGTTTGCATGCAATTCTGTGATCCGATCAGACCAACATTGTAGATGTAAGGACTGAACAAATGAAAATCTAAGCGTTGGGGGGTTAGTGATGTACAACTCAGATAAAATTCTCTAGTGTTTGCATAAGTGAATTGCTGTTTGTGTGTTTAAGTGCAGATAATTATGTCTGCACAGCCAGAACCAGACTTACCTCAGGTCTTCCACTGTGGCAATTCGAGTTTTACCTTTTCCTTCATAAACCATATCTGAAATTGGCTGTTTAAAAAA]




>consensus_13776#0
TCCTGCACAGCACAGCCTGCACTACACCAACCAACCACCAAAACCCTTCTTCCCCCATCG
AAAGCCCATCTCACTCTCCTCCCCGCCGCCGCCGCCAAGCCTGCGCGGCGCCCTCCCCTC
CCGATCGCCATGGCCTCCATGGCGTTCACCGCCGCCAAGTTCCTCCCTGCCACGGCGCCC
ACGCACCTCGACTCCTCCCCGCGCCTCTCCCCGCCCCGCGCCGGTAGCCTCTCCTTCTCC
CCGCTCTCCTCGTCGTCGTCCGCCCTCCTCCTCCGCCTCCGATCCCCGTCCCCGTCTGGT
CCGTCTGGGCCAGGTGGCAGGCTGCCCCCGCCGCCGCGCTCCTACGGCGGCGGCGGCGGA
TCTGGCGACGCCGCGGATTCCGGGGGCAGCAGCGGCGGCATCCTCGGCATCTTCCTCGCC
GGGTGGGCGGCACGCGTCGCCGCGGATCCGCAGTTCCCGTTCAAGGTGCTCATGGAGGAG
CTCGTCGGCGTCAGCGCCTGCGTGCTCGGCGACATGGCGTCCCGCCCGAACTTCGGGCTC
AACGAGCTCGACTTCGTCTTCTCCACCCTCGTCGTCGGATCCATCCTCAACTTCGTCCTC
ATGTACCTCCTCGCGCCCACCGCCGGCGCCTCGGCCGCCGCGTCCGCCGCCGCGTCGGGG
CTCCCCAGCCACATGTTCGAGGCCGGCGCCTACTCCTTGGGCTCCCGCGTCGCGACGCTG
CTATCCAAGGGCGCCACGTTCGCCGCCGTGGGGTTCGCCGCGGGGCTCGCCGGCACCGCG
ATCTCCAACGGCCTCATCTCGCTGCGGAAACGCATGGACCCGGCGTTCGAGACCCCGAAC
AAGGCGCCGCCCACGCTGCTCAACGCCGCTACCTGGGCGATCCACATGGGGGTCAGCAGC
AACCTGCGGTACCAGACGCTGAACGGCGTCGAGTACCTGCTCGCCAACGCCGCGCCGCCG
TCGGTGTTCAAGGTGTCCGTCGTTGCTCTCCGGTGCATAAACAACGTGCTGGGTGGCATG
TCCTTCGTGCTACTCGCGAGGTTAACCGGGTCGCAGAAGTCTGATGCGCCGGCCGCCTCG
GCGACTGCGGAGGAGGAGAAGGAGAGGTTGATAGCCGTGGGCAATGACATTGCCGCAGAC
GCCGTCGGCGCGGGAAGGGATGGAGAGGGTAAGTGAGTGGATGCATAATGCATATGCTTG
CTTGCTTGCATCGCTCAAGCTTCGTTTGCGGCTTCTTGGACATGGGCCAAGAAAGCTCTG
TAGATGATAAGCCGGTTGGCTTGGCAATAAGGAGTGAGGCTTGAAACAATTTGTTCAGTC
CATCTTTGGTGTTCTTGGTTTAATCTGTCGACATGCTTAGTTGATCTTAGAATAAAGCTT
TACCTTTTTTCTGTTGCTCGTTTTGGTCACTGGCCTAACCGGGGGGATTACTTTGCGCGC
GGTAACTTCAATTGCTTTGTTTGCATGCAATTCTGTGATCCGATCAGACCAACATTGTAG
ATGTAAGGACTGAACAAATGAAAATCTAAGCGTTGGGGGGTTAGTGATGTACAACTCAGA
TAAAATTCTCTAGTGTTTGCATAAGTGAATTGCTGTTTGTGTGTTTAAGTGCAGATAATT
ATGTCTGCACAGCCAGAACCAGACTTACCTCAGGTCTTCCACTGTGGCAATTCGAGTTTT
ACCTTTTCCTTCATAAACCATATCTGAAATTGGCTGTTTAAAAAA

consensusID : consensus_13776#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 569
fasta sequence

                              [GCGCCGCCCACGCTGCTCAACGCCGCTACCTGGGCGATCCACATGGGGGTCCAGCAGCCAACTGCGGTACCAGACGCTGAACGGCGTCGAGTACCTGCTCGCCAACGCCGCGCCGCCGTCGGTGTTCAAGGTGTCCGTCGTTGCTCTCCGGTGCATAAACAACGTGCTGGGTGGCATGTCCTCGTGCTACTCGCGAGGTTAACCGGGTCGCAGAAGTCTGATGCGCCGGCCGCCTCGGCGACTGCCGGAGGAGGAGAAGGAGAGGTTGATAGCCGTGGGCAATGACATTGCCGCAGACCCGTCGGCGCGGGAAGGGATGGAGAGGGTAAGTGAGTGGATGCATAATGCATATGCTTGCTTGCTTGCATCGCTCAAGCTTCGTTTGCGGCTTCTTGGACATGGGCCAAGAAAGCTCTGTAGATGATAAGCCGGTTGGCTTGGCAATAAGGAGTGAGGCTTGAAACAATTTGTTCAGTCCATCTTTGGTGTTCTTGGTTTAATCTGTCGACATGCTTAGTTGATCTTAGAATAAAGCTTTACCTTTTTTCAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU029534             [GCGCCGCCCACGCTGCTCAACGCCGCTACCTGGGCGATCCACATGGGGGTCCAGCAGCCAACTGCGGTACCAGACGCTGAACGGCGTCGAGTACCTGCTCGCCAACGCCGCGCCGCCGTCGGTGTTCAAGGTGTCCGTCGTTGCTCTCCGGTGCATAAACAACGTGCTGGGTGGCATGTCCTCGTGCTACTCGCGAGGTTAACCGGGTCGCAGAAGTCTGATGCGCCGGCCGCCTCGGCGACTGCCGGAGGAGGAGAAGGAGAGGTTGATAGCCGTGGGCAATGACATTGCCGCAGACCCGTCGGCGCGGGAAGGGATGGAGAGGGTAAGTGAGTGGATGCATAATGCATATGCTTGCTTGCTTGCATCGCTCAAGCTTCGTTTGCGGCTTCTTGGACATGGGCCAAGAAAGCTCTGTAGATGATAAGCCGGTTGGCTTGGCAATAAGGAGTGAGGCTTGAAACAATTTGTTCAGTCCATCTTTGGTGTTCTTGGTTTAATCTGTCGACATGCTTAGTTGATCTTAGAATAAAGCTTTACCTTTTTTCAAAAAAAAAAAAAAAAAAAAA]




>consensus_13776#1
GCGCCGCCCACGCTGCTCAACGCCGCTACCTGGGCGATCCACATGGGGGTCCAGCAGCCA
ACTGCGGTACCAGACGCTGAACGGCGTCGAGTACCTGCTCGCCAACGCCGCGCCGCCGTC
GGTGTTCAAGGTGTCCGTCGTTGCTCTCCGGTGCATAAACAACGTGCTGGGTGGCATGTC
CTCGTGCTACTCGCGAGGTTAACCGGGTCGCAGAAGTCTGATGCGCCGGCCGCCTCGGCG
ACTGCCGGAGGAGGAGAAGGAGAGGTTGATAGCCGTGGGCAATGACATTGCCGCAGACCC
GTCGGCGCGGGAAGGGATGGAGAGGGTAAGTGAGTGGATGCATAATGCATATGCTTGCTT
GCTTGCATCGCTCAAGCTTCGTTTGCGGCTTCTTGGACATGGGCCAAGAAAGCTCTGTAG
ATGATAAGCCGGTTGGCTTGGCAATAAGGAGTGAGGCTTGAAACAATTTGTTCAGTCCAT
CTTTGGTGTTCTTGGTTTAATCTGTCGACATGCTTAGTTGATCTTAGAATAAAGCTTTAC
CTTTTTTCAAAAAAAAAAAAAAAAAAAAA

consensusID : consensus_13776#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 248
fasta sequence

                              [CCGATCAGACCAACATTGTAGATGTAAGGACTGAACAAATGAAAATCTAAGCGTTGGGGGGTTAGTGATGTACAACTCAGATAAAATTCTCTAGTGTTTGCATAAGTGAATTGCTGTTTGTGTGTTTAAGTGCAGATAATTATGTCTGCACAGCCAGAACCAGACTTACCTCAGGTCTTCCACTGTGGCAATTCGAGTTTTACCTTTTCCTTCANAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL CA753981             [CCGATCAGACCAACATTGTAGATGTAAGGACTGAACAAATGAAAATCTAAGCGTTGGGGGGTTAGTGATGTACAACTCAGATAAAATTCTCTAGTGTTTGCATAAGTGAATTGCTGTTTGTGTGTTTAAGTGCAGATAATTATGTCTGCACAGCCAGAACCAGACTTACCTCAGGTCTTCCACTGTGGCAATTCGAGTTTTACCTTTTCCTTCANAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_13776#2
CCGATCAGACCAACATTGTAGATGTAAGGACTGAACAAATGAAAATCTAAGCGTTGGGGG
GTTAGTGATGTACAACTCAGATAAAATTCTCTAGTGTTTGCATAAGTGAATTGCTGTTTG
TGTGTTTAAGTGCAGATAATTATGTCTGCACAGCCAGAACCAGACTTACCTCAGGTCTTC
CACTGTGGCAATTCGAGTTTTACCTTTTCCTTCANAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAA

consensusID : consensus_13776#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 158
fasta sequence

                              [GATGGAGAGGGTTAATGAATGGATGCATAATGCATAAGCTTGCTTGCTTGCATCGCTCAAGCTTCGTTTGCTGCTTTTTGGAACCTGGGCCCAAAAAGACTTTTTAGATGTATAACCCCGTTGGCTTGACCATAAGGAGTGAGGCTTTAAAAAAAAAA]

[+] EMBL BI799702             [GATGGAGAGGGTTAATGAATGGATGCATAATGCATAAGCTTGCTTGCTTGCATCGCTCAAGCTTCGTTTGCTGCTTTTTGGAACCTGGGCCCAAAAAGACTTTTTAGATGTATAACCCCGTTGGCTTGACCATAAGGAGTGAGGCTTTAAAAAAAAAA]




>consensus_13776#3
GATGGAGAGGGTTAATGAATGGATGCATAATGCATAAGCTTGCTTGCTTGCATCGCTCAA
GCTTCGTTTGCTGCTTTTTGGAACCTGGGCCCAAAAAGACTTTTTAGATGTATAACCCCG
TTGGCTTGACCATAAGGAGTGAGGCTTTAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13776#1      ------------------------------------------------------------
consensus_13776#3      ------------------------------------------------------------
consensus_13776#0      TCCTGCACAGCACAGCCTGCACTACACCAACCAACCACCAAAACCCTTCTTCCCCCATCG 60
consensus_13776#2      ------------------------------------------------------------
                                                                                   

consensus_13776#1      ------------------------------------------------------------
consensus_13776#3      ------------------------------------------------------------
consensus_13776#0      AAAGCCCATCTCACTCTCCTCCCCGCCGCCGCCGCCAAGCCTGCGCGGCGCCCTCCCCTC 120
consensus_13776#2      ------------------------------------------------------------
                                                                                   

consensus_13776#1      ------------------------------------------------------------
consensus_13776#3      ------------------------------------------------------------
consensus_13776#0      CCGATCGCCATGGCCTCCATGGCGTTCACCGCCGCCAAGTTCCTCCCTGCCACGGCGCCC 180
consensus_13776#2      ------------------------------------------------------------
                                                                                   

consensus_13776#1      ------------------------------------------------------------
consensus_13776#3      ------------------------------------------------------------
consensus_13776#0      ACGCACCTCGACTCCTCCCCGCGCCTCTCCCCGCCCCGCGCCGGTAGCCTCTCCTTCTCC 240
consensus_13776#2      ------------------------------------------------------------
                                                                                   

consensus_13776#1      ------------------------------------------------------------
consensus_13776#3      ------------------------------------------------------------
consensus_13776#0      CCGCTCTCCTCGTCGTCGTCCGCCCTCCTCCTCCGCCTCCGATCCCCGTCCCCGTCTGGT 300
consensus_13776#2      ------------------------------------------------------------
                                                                                   

consensus_13776#1      ------------------------------------------------------------
consensus_13776#3      ------------------------------------------------------------
consensus_13776#0      CCGTCTGGGCCAGGTGGCAGGCTGCCCCCGCCGCCGCGCTCCTACGGCGGCGGCGGCGGA 360
consensus_13776#2      ------------------------------------------------------------
                                                                                   

consensus_13776#1      ------------------------------------------------------------
consensus_13776#3      ------------------------------------------------------------
consensus_13776#0      TCTGGCGACGCCGCGGATTCCGGGGGCAGCAGCGGCGGCATCCTCGGCATCTTCCTCGCC 420
consensus_13776#2      ------------------------------------------------------------
                                                                                   

consensus_13776#1      ------------------------------------------------------------
consensus_13776#3      ------------------------------------------------------------
consensus_13776#0      GGGTGGGCGGCACGCGTCGCCGCGGATCCGCAGTTCCCGTTCAAGGTGCTCATGGAGGAG 480
consensus_13776#2      ------------------------------------------------------------
                                                                                   

consensus_13776#1      ------------------------------------------------------------
consensus_13776#3      ------------------------------------------------------------
consensus_13776#0      CTCGTCGGCGTCAGCGCCTGCGTGCTCGGCGACATGGCGTCCCGCCCGAACTTCGGGCTC 540
consensus_13776#2      ------------------------------------------------------------
                                                                                   

consensus_13776#1      ------------------------------------------------------------
consensus_13776#3      ------------------------------------------------------------
consensus_13776#0      AACGAGCTCGACTTCGTCTTCTCCACCCTCGTCGTCGGATCCATCCTCAACTTCGTCCTC 600
consensus_13776#2      ------------------------------------------------------------
                                                                                   

consensus_13776#1      ------------------------------------------------------------
consensus_13776#3      ------------------------------------------------------------
consensus_13776#0      ATGTACCTCCTCGCGCCCACCGCCGGCGCCTCGGCCGCCGCGTCCGCCGCCGCGTCGGGG 660
consensus_13776#2      ------------------------------------------------------------
                                                                                   

consensus_13776#1      ------------------------------------------------------------
consensus_13776#3      ------------------------------------------------------------
consensus_13776#0      CTCCCCAGCCACATGTTCGAGGCCGGCGCCTACTCCTTGGGCTCCCGCGTCGCGACGCTG 720
consensus_13776#2      ------------------------------------------------------------
                                                                                   

consensus_13776#1      ------------------------------------------------------------
consensus_13776#3      ------------------------------------------------------------
consensus_13776#0      CTATCCAAGGGCGCCACGTTCGCCGCCGTGGGGTTCGCCGCGGGGCTCGCCGGCACCGCG 780
consensus_13776#2      ------------------------------------------------------------
                                                                                   

consensus_13776#1      ------------------------------------------------------------
consensus_13776#3      ------------------------------------------------------------
consensus_13776#0      ATCTCCAACGGCCTCATCTCGCTGCGGAAACGCATGGACCCGGCGTTCGAGACCCCGAAC 840
consensus_13776#2      ------------------------------------------------------------
                                                                                   

consensus_13776#1      ---GCGCCGCCCACGCTGCTCAACGCCGCTACCTGGGCGATCCACATGGGGGTCCAGCAG 57
consensus_13776#3      ------------------------------------------------------------
consensus_13776#0      AAGGCGCCGCCCACGCTGCTCAACGCCGCTACCTGGGCGATCCACATGGGGGTC-AGCAG 899
consensus_13776#2      ------------------------------------------------------------
                                                                                   

consensus_13776#1      CCAACTGCGGTACCAGACGCTGAACGGCGTCGAGTACCTGCTCGCCAACGCCGCGCCGCC 117
consensus_13776#3      ------------------------------------------------------------
consensus_13776#0      CAACCTGCGGTACCAGACGCTGAACGGCGTCGAGTACCTGCTCGCCAACGCCGCGCCGCC 959
consensus_13776#2      ------------------------------------------------------------
                                                                                   

consensus_13776#1      GTCGGTGTTCAAGGTGTCCGTCGTTGCTCTCCGGTGCATAAACAACGTGCTGGGTGGCAT 177
consensus_13776#3      ------------------------------------------------------------
consensus_13776#0      GTCGGTGTTCAAGGTGTCCGTCGTTGCTCTCCGGTGCATAAACAACGTGCTGGGTGGCAT 1019
consensus_13776#2      ------------------------------------------------------------
                                                                                   

consensus_13776#1      GTCCT-CGTGCTACTCGCGAGGTTAACCGGGTCGCAGAAGTCTGATGCGCCGGCCGCCTC 236
consensus_13776#3      ------------------------------------------------------------
consensus_13776#0      GTCCTTCGTGCTACTCGCGAGGTTAACCGGGTCGCAGAAGTCTGATGCGCCGGCCGCCTC 1079
consensus_13776#2      ------------------------------------------------------------
                                                                                   

consensus_13776#1      GGCGACTGCCGGAGGAGGAGAAGGAGAGGTTGATAGCCGTGGGCAATGACATTGCCGCAG 296
consensus_13776#3      ------------------------------------------------------------
consensus_13776#0      GGCGACTGC-GGAGGAGGAGAAGGAGAGGTTGATAGCCGTGGGCAATGACATTGCCGCAG 1138
consensus_13776#2      ------------------------------------------------------------
                                                                                   

consensus_13776#1      AC-CCGTCGGCGCGGGAAGGGATGGAGAGGGTAAGTGAGTGGATGCATAATGCATATGCT 355
consensus_13776#3      --------------------GATGGAGAGGGTTAATGAATGGATGCATAATGCATAAGCT 40
consensus_13776#0      ACGCCGTCGGCGCGGGAAGGGATGGAGAGGGTAAGTGAGTGGATGCATAATGCATATGCT 1198
consensus_13776#2      CCGATCAGACCAACATTGTAGATGTAAGGACTGAACAAATGAAAATCTAA-GCGTTGGGG 59
                                           **** *  *  * *   * ** *    *** ** *  *  

consensus_13776#1      TGCTTGCT-TGCATCGCTCAAGCTTCGTTTGCGGCTTCTTGGA--CATGGGCC-AAGAAA 411
consensus_13776#3      TGCTTGCT-TGCATCGCTCAAGCTTCGTTTGCTGCTTTTTGGAA-CCTGGGCC-CAAAAA 97
consensus_13776#0      TGCTTGCT-TGCATCGCTCAAGCTTCGTTTGCGGCTTCTTGGA--CATGGGCC-AAGAAA 1254
consensus_13776#2      GGTTAGTGATGTACAACTCAGATAAAATTCTCTAGTGTTTGCATAAGTGAATTGCTGTTT 119
                        * * *   ** *   ****       **  *   *  *** *    **           

consensus_13776#1      G-CTCTGTAGATG---ATAAGCCGGTTGGCTTGGCAATAAGGAGTGAGGCTTGAAACAAT 467
consensus_13776#3      GACTTTTTAGATGT--ATAACCCCGTTGGCTTGACCATAAGGAGTGAGGCTTTAAAAAAA 155
consensus_13776#0      G-CTCTGTAGATG---ATAAGCCGGTTGGCTTGGCAATAAGGAGTGAGGCTTGAAACAAT 1310
consensus_13776#2      GTGTGTTTAAGTGCAGATAATTATGTCTGCACAGCCAGAACCAGACTTACCTCAGGTCTT 179
                       *  * * **  **   ****    **  **    * * **  **     * * *      

consensus_13776#1      TTGTTCAGTCCATCTTTGGTGTTCTTGGTTTAATCTGTCGACATGCTTAGTTGATCTTAG 527
consensus_13776#3      AAA--------------------------------------------------------- 158
consensus_13776#0      TTGTTCAGTCCATCTTTGGTGTTCTTGGTTTAATCTGTCGACATGCTTAGTTGATCTTAG 1370
consensus_13776#2      CCACTGTGGCAATTCGAGTTTTACCTTTTCCTTCANAAAAAAAAAAAAAAAAAAAAAAAA 239
                                                                                   

consensus_13776#1      AATAAAGCTTTACCTTTTTTCAAAAAAAAAAAAAAAAAAAAA------------------ 569
consensus_13776#3      ------------------------------------------------------------
consensus_13776#0      AATAAAGCTTTACCTTTTTTCTGTTGCTCGTTTTGGTCACTGGCCTAACCGGGGGGATTA 1430
consensus_13776#2      AAAAAAAAA--------------------------------------------------- 248
                                                                                   

consensus_13776#1      ------------------------------------------------------------
consensus_13776#3      ------------------------------------------------------------
consensus_13776#0      CTTTGCGCGCGGTAACTTCAATTGCTTTGTTTGCATGCAATTCTGTGATCCGATCAGACC 1490
consensus_13776#2      ------------------------------------------------------------
                                                                                   

consensus_13776#1      ------------------------------------------------------------
consensus_13776#3      ------------------------------------------------------------
consensus_13776#0      AACATTGTAGATGTAAGGACTGAACAAATGAAAATCTAAGCGTTGGGGGGTTAGTGATGT 1550
consensus_13776#2      ------------------------------------------------------------
                                                                                   

consensus_13776#1      ------------------------------------------------------------
consensus_13776#3      ------------------------------------------------------------
consensus_13776#0      ACAACTCAGATAAAATTCTCTAGTGTTTGCATAAGTGAATTGCTGTTTGTGTGTTTAAGT 1610
consensus_13776#2      ------------------------------------------------------------
                                                                                   

consensus_13776#1      ------------------------------------------------------------
consensus_13776#3      ------------------------------------------------------------
consensus_13776#0      GCAGATAATTATGTCTGCACAGCCAGAACCAGACTTACCTCAGGTCTTCCACTGTGGCAA 1670
consensus_13776#2      ------------------------------------------------------------
                                                                                   

consensus_13776#1      -------------------------------------------------------
consensus_13776#3      -------------------------------------------------------
consensus_13776#0      TTCGAGTTTTACCTTTTCCTTCATAAACCATATCTGAAATTGGCTGTTTAAAAAA 1725
consensus_13776#2      -------------------------------------------------------