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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13777#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 878 fasta sequence
[GGTAACCCCTGCAGGTTACCCGGTTCCGGAAATTCCCCGGGTTCGACCCACGCGTTCCGGATATGATAGACCCAAACGCAA-GAATGGCA-TCCAGCTGTTCCAACCGTGGTCTCCTCCTCCTCCTCGCTTCCGCCGTCCTCCTCT-CCGGCCTCGCCGCCGGCCGCCG-CTGGGAGTGGGAGAGTCAGTGCCAGCCGTGGGAGGCCTTCCCGCACAACCCGCTCTCCGGCT-GCCGCGGCTAC-GTGATCAGCCGC-GCCTGCCCGGGCCAC--GGCCGCGCCGCCCGGAGATGGCCAAGGCGCGGTG-CTG-CCGCGAGCTCGCCGCCGTCCAGCCGCG-CTGC-CGGTGCGAGGCGCTG-CGGCTGTTCATGGACGGC-GTGGGCGAGCTGCGCGGGTGCCCGAGGGAGGCGCAGAGGGCCGCC-GCCGCCGCGC-TCATGGCGGCGGGGGAGTGC-GA-CCTGCGGGGTGGCTCCGGCGAGACGGAGCGGTGCTA-CTGGCCA-TGGCTCGTCGGCGACGGCGATGTG-CCAGTGTACTGAGAAGAAGTGAAGCTTGTGATATTATATTATTTT-CAAAAAAAAAATGTGGAGATTGTGATATGTAAGTTTTCGAATAAAGTGTTGCA-TCGGTGGATTGATCTGATATATTCAGATCGTCTCATTCAAATG--CTTGCGAACTGAATTAATA-TTAA-ACGAATAATTGAATTAATATTAAA--AAAAAAAAAAGCGGCCCCCCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATAGTAACTTGTAAAAGATTAGGAGTATCAAAAAGGCAGGCACGCATCATGCAAGATTCTGAGCCATCATACGATGGAGAAAAGTACAGCAGCTCACTCAGTCGCCAAAAAAAA]
[+] EMBL BI796349 [GGTAACCCCTGCAGGTTACCCGGTTCCGGAAATTCCCCGGGTTCGACCCACGCGTTCCGGATATGATAGACCCAAACGCAAGGAATGGCATTCCAGCTGTTCCAACCGTGGTCTCCTCCTCCTCCTCGCTTCC CCGTCCTCCTCTCCCGGCCTCGCCGCC GCCGCCG CTGGGAGTGGGAGAGTCAGTGCCAGCCGTGGGAGGCCTTCCCGCACAACCCGCTCTCCGGCT GCCGCGGCTAC GTGATCAGCCGC GCCTGCCCGGGCCAC GGCCGC CCGCCCGGAGATGGCCAAGGCGCGGTG CTG CCGCGAGCTCGCCGCCGTCCAGCCGCG CTGC CGGTGCGAGGCGCTG CGGCTGTTCATGGACGGC GTGGGCGAGCTGCGCGGGTGCCCGAGGGAGGCGCAGAGGGCCGCC GCCGCCGCGC TCATGGCGGCGGGGGAGTGC GA CCTGCGGGGTGGCTCCGGCGAGACGGAGCGGTGCTA CTGGCCA TGGCTCGTCGGCGACGGCGAGGTG CCAGTGTACTGAGAAGAAGTGAAGCTTGTGATATTATATTATTTT CAAAAA ]
[+] EMBL BI799438 [ gacAACGCAA GAATGGCA TCCAGCTGTTCCAACCGTGGTCTCCTCCTCCTCCTCGCTTCC CCGTCCTCCTCT CCGGCCTCGCCGCCGGCCGCCG CTGGGAGTGGGAGAGTCAGTGCCAGCCGTGGGAGGCCTTCCCGCACAACCCGCTCTCCGGCT GCCGCGGCTAC GTGATCAGCCGC GCCTGCCCGGGCCACG GGCCGCGCCGCCCGGAGATGGCCAAGGCGCGGTG CTG CCGCGAGCTCGCCGCCGTCCAGCCGCG CTGC CGGTGCGAGGCGCTG CGGCTGTTCATGGACGGC GTGGGCGAGCTGCGCGGGTGCCCGAGGGAGGCGCAGAGGGCCGCC GCCGCCGCGC TCATGGCGGCGGGGGAGTGC GA CCTGCGGGGTGGCTCCGGCGAGACGGAGCGGTGCTA CTGGCCA TGGCTCGTCGGCGACGGCGATGTG CCAGTGTACTGAGAAGAAGTGAAGCTTGTGATATTATATTATTTT CAAAAA ]
[+] EMBL BI797635 [ A GAATGGCA TCCAGCTGTTCCAACCGTGGTCTCCTCCTCCTCCTCGCTTCCGCCGTCCTCCTCT CCGGCCTCGCCGCCGGCCGCCG CTGGGAGTGGGAGAGTCAGTGCCAGCCGTGGGAGGCCTTCCCGCACAACCCGCTCTCCGGCT GCCGCGGCTAC GTGATCAGCCGC GCCTGCCCGGGCCACG GGCCGCGCCGCCCGGAGATGGCCAAGGCGCGGTG CTG CCGCGAGCTCGCCGCCGTCCAGCCGCG CTGC CGGTGCGAGGCGCTG CGGCTGTTCATGGACGGC GTGGGCGAGCTGCGCGGGTGCCCGAGGGAGGCGCAGAGGGCCGCC GCCGCCGCGC TCATGGCGGCGGGGGAGTGC GA CCTGCGGGGTGGCTCCGGCGAGACGGAGCGGTGCTA CTGGCCA TGGCTCGTCGGCGACGGCGATGTG CCAGTGTACTGAGAAGAAGTGAAGCTTGTGATATTATATTATTTT CAAAAAAAAAATGTGGAGATTGTGATAaaaaaaaaa ]
[+] EMBL BI800023 [ atGCA TCCAGCTGTTCCAACCGTGGTCTCCTCCTCCTCCTCGCTTCCGCCGTCCTCCTCT CCGGCCTCGCCGCCGGCCGCCG CTGGGAGTGGGAGAGTCAGTGCCAGCCGTGGGAGGCCTTCCCGCACAACCCGCTCTCCGGCT GCCGCGGCTAC GTGATCAGCCGC GCCTGCCCGGGCCACG GGCCGCGCCGCCCGGAGATGGCCAAGGCGCGGTG CTG CCGCGAGCTCGCCGCCGTCCAGCCGCG CTGC CGGTGCGAGGCGCTG CGGCTGTTCATGGACGGC GTGGGCGAGCTGCGCGGGTGCCCGAGGGAGGCGCAGAGGGCCGCC GCCGCCGCGC TCATGGCGGCGGGGGAGTGC GA CCTGCGGGGTGGCTCCGGCGAGACGGAGCGGTGCTATCTGGCCA TGGCTCGTCGGCGACGGCGATGTG CCAGTGTACTGAGAAGAAGTGAAGCTTGTGATATTATATTATTTT CAAAAAAAAAATGTGGAGATTGTGATATGTAAGTTTTCGAATAAAGTGTTGCA TCGGTGGATTGATCTGATAaaaaaa ]
[+] EMBL BI796170 [ GCA TCCA CTGTTCCAACCGTGGTCTCCTCCTCCTCCTCGCTTCC CCGTCCTCCTCT CCGGCCTCGCCGCCGGCC CCG CTGGGAGTGGGAGAGTCAGTGCCAGCCGTGGGAGGCCTTCCCGCACAACCCGCTCTCCGGCTGGCCGCGGCTAC GTGATCAGCCGC GCCTGCCCGGGCCAC GGCCGCGCCGCCCGGAGATGGCCAAGGCGCGGTG CTGTCCGCGAGCTCGCCGCCGTCCAGCCGCGTCTGC CGGTGCGAGGCGCTGTCGGCTGTTCATGGACGGC GTGGGCGAGCTGCGCGGGTGCCCGAGGGAGGCGCAGAGGGCCGCC GCCGCCGCGC TCATGGCGGCGGGGGAGTGC GA CCTGCGGGGTGGCTCCGGCGAGACGGAGCGGTGCTA CTGGCCA TGGCTCGTCGGCGACGGCGATGTG CCAGTGTACTGAGAAGAAGTGAAGCTTGTGATATTATATTATTTT CAAAAA ]
[+] EMBL BI796780 [ tccGCA TCCA CTGTTCCAACCGTGGTCTCCTCCTCCTCCTCGCTTCCGCCGTCCTCCTCT CCGGCCTCGCCGCC GCCGCCG CTGGGAGTGGGAGAGTCAGTGCCA CC TGGGA GCCTTCCCGCACAACCCGCTCTCCGGCT GCCGCGGCTAC GTGATCAGCCGC GCCTGCCCGGGCCAC GGCCGCGCCGCCCGGAGATGGCCAAGGC CGGTGTCT CCGCGAGCTCTCC CCGTCCA CCGCGTCTGC CGGTGCGAGGCGCTG CGGCTGTTCATGGACGGC GTGGGCGAGCTGCGCGGGTGCCCGAGGGAGGCGCAGAGGGCCGCC GCCGCCGCGC TCATGGCGGCGGGGGAGTGC GA CCTGCGGGGTGGCTCCGGCGAGACGGA CGGTGCTA CTGGCCA TGGCTCGTCGGCGACGGCGATGTG CCAGTGTACTGAGAAGAAGTGAAGCTTGTGATATTATATTATTTT CAAAAA ]
[+] EMBL BI799951 [ TCTCCTCCTCCTCCTCGCTTCCGCCGTCCTCCTCT CC GCCTCGCCGCC GCCGCCGTCTGGGAGTGGGAGAGTCAGTCCCACCCGTGGGAGCCCTTCCCGCACAACCCGCTCTCCGGCT CCGCGGCTAC GTGATCAGCCGC GCCTGCCCGGGCCACCGGGCCGC CCGCCCGGAGATGGCCAAGGCGCGGTG CTC CCGCGAGCTCGCCGCCGTCCAGCCGCG CTGC CGGTGCGAGGCGCTG CGGCTGTTCATGGACGGC GTGGGCGAGCTGCGCGGGTGCCCGAGGGAGGCGCAGAGGGCCGCC GCCGCCGCGC TCATGGCGGCGGGGGAGTGC GACCCTGCGGGGTGGCTCCGGCGAGACGGAGCGGTGCTA CTGGCCACTGGCTCGTCGGCGACGGCGATGTG CCAGTGTACTGAGAAGAAGTGAAGCTTGTGATATTATATTATTTT CAAAAAAAAAATGTGGAGATTGTGATATGTAAGTTTTCGAATAAAGTGTTGCA TCGGTGGATTGATCTGATATATTCAGATCGTCTCATTCAAATG CTTGCGAACTGAATTAATA TTAA ACGAATAATTGAATTAATATTAAACGAAAAAAAAAA ]
[+] EMBL BI794980 [ GGGAGGCCTTCCCGCACAACCCGCTCTCCGGCT CCGCGGCTACTGTGATCA CCGCGGCCTGCCCGGGCCAC GGCCGCGCCGCCCGGAGATGGCCAAGGCGCGGTG CT CCGCGAGCTCTCC CCGTCCATCCGCGTCTGCGCGGTGCGAGGCGCTG CGGCTGTTCATGGACGGC GTGGGCGA CTGCGC GGTGCCCGAGGGAGGC CAGA GGCC CC CC CCGCGC TCAT GC GCGGGGGAGTGCAGA CCTGCGGGGTGGCTCCGGCGAGACGGA CGGTGCTA CT GCCA TGGCTCGTCGGCGACGGCGATGTG CCAGTGTACTGAGAAGAAGTGAAGCTTGTGATATTATATTATTTT CAAAAAAAAAATGTGGAGATTGTGATATGTAAGTTTTCGAATAAAGTGTTGCA TCGGTGGATTGATCTGATATATTCAGATCGTCTCATTC AAT CTTGCGAACTGAATTAATA TTAA ACGAATAATTGAATTAATATTAAA AAAAAA ]
[+] EMBL BI798623 [ GGC CTC CGCCTGTTCAT GACGGCTGT GGCGA CTGCCCGGGTGCCCGAGGGAGGCCCAGAGGGCCCCCTGCCGCCGCGCTTCATGGCGCCGGGGGAGTGC GA CCTGCGGGGTGGCTCCGGCGAGACGGAGCGGTGCTA CTGGCCC TGGCTCGTCGGCGACGGCGATGTGCCCAGTGTACTGAGAAGAAGTGAAGCTTGTGATATTATATTATTTTCCAAAAAAAAAATGTGGAGATTGTGATATGTAAGTTTTCGAATAAAGTGTTGCACTCGGTGGATTGATCTGATATATTCAGATCGTCTCATTCAAATGCCCTTGCGAACTGAATTAATATTTAACACGAATAATTGAATTAAAA AAA AAAAAAAAGGGCGGCCCCCCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATAGTAACTTGTAAAAGATTAGGAGTATCAAAAAGGCAGGCACGCATCATGCAAGATTCTGAGCCATCATACGATGGAGAAAAGTACAGCAGCTCACTCAGTCGCCAAAAAAAA]
consensusID : consensus_13777#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 590 fasta sequence
[CGTCCTCCTCTCCAGGCCTTCAGCCAGCCGGCACGCCGCTGGGAGTGGGAGAGTCAGTGCCAGCCGTGGGAGCCTTTCTCCAGCACAACCCAGCTTCATCCAGGCATGCCAGCAGGCATACAGTGATCAAGCCAGCAGCACATGCACCAGGGCACACAGGGCCAGCAGCACAGCACACAGGAGATGGCACAAGGCAGCGGTGCATGCCAGCAGAGCATCAGCACAGCACAGTCCAAGCCAGCAGCATGCACAGGTGCGAGGCAGCATGCAGGCATGTTCAATGGACAGGCGTGGGCGAAGCATGCAGCAGGGTGCCACAGAGGGAGGCAGCAGAGGGCACAGCACAGCACAGCACAGCAGCTCATGGCAGGCGGGGGAGTGCAGACCATGCCGGGGTGGCATCACAGGCGAGACAGGAGCAGGTGCTACATGGCCATTGGCATCGTCAGGCGACAGGCAGATGTGCCAAGTGTACTGAGAAGAAGTGAAGCTTGTGATATTATATTATTTTCAAAAAAAAAATGTGGAGATTGTGATATGTAAGTTTTCGAATAAAGTGTTGCATCGGTGGATTGATCTGATAAAAAAAA]
[+] EMBL BI797759 [CGTCCTCCTCTCCAGGCCTTCAGCCAGCCGGCACGCCGCTGGGAGTGGGAGAGTCAGTGCCAGCCGTGGGAGCCTTTCTCCAGCACAACCCAGCTTCATCCAGGCATGCCAGCAGGCATACAGTGATCAAGCCAGCAGCACATGCACCAGGGCACACAGGGCCAGCAGCACAGCACACAGGAGATGGCACAAGGCAGCGGTGCATGCCAGCAGAGCATCAGCACAGCACAGTCCAAGCCAGCAGCATGCACAGGTGCGAGGCAGCATGCAGGCATGTTCAATGGACAGGCGTGGGCGAAGCATGCAGCAGGGTGCCACAGAGGGAGGCAGCAGAGGGCACAGCACAGCACAGCACAGCAGCTCATGGCAGGCGGGGGAGTGCAGACCATGCCGGGGTGGCATCACAGGCGAGACAGGAGCAGGTGCTACATGGCCATTGGCATCGTCAGGCGACAGGCAGATGTGCCAAGTGTACTGAGAAGAAGTGAAGCTTGTGATATTATATTATTTTCAAAAAAAAAATGTGGAGATTGTGATATGTAAGTTTTCGAATAAAGTGTTGCATCGGTGGATTGATCTGATAAAAAAAA]
consensusID : consensus_13777#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 525 fasta sequence
[CCAGCGCAAGAATGGCATCCAGCTGTTCCAACCGTGTCTCCTCCTCCATCCTCGCTTCCGCCGTCCTCCTCTCCGCCTCCCACCAGCCACCGCTGGGAGTGGGAGAGTCAGTGCCAGCCGTGGGAGGCCTTCCCGCACAACCCGCTCTCCAGGCTGCACGCGGCTACGTGATCAGCCAGCAGCCTGCCCAGGGCCACAGGCCAGCACCGCCCAGGAGATGGCACAAGGCGCAGGTGCATGCCAGCAGAGCTCGCCAGCCAGTCCAGCCAGCGCTGCCAGGTGCGAGGCAGCATGCAGGCATGTTCATGGACAGGCAGTGGGCAGAGCATGCAGCGGGTGCCACGAGGGAGGCAGCAGAGGGCACAGCACAGCACAGCCAGCAGCTCATGGCAGGCGGGGGAGTGCGACCTGCGGGGTGGCTCCGGCGAGACGGAGCGGTGCTACTGGCCATGGCTCGTCGGCGACGGCGATGTGCCAGTGTACTGAGAAGAAGTGAAGCTTGTGATATTATATTATTTTCAAAAA]
[+] EMBL BI795680 [CCAGCGCAAGAATGGCATCCAGCTGTTCCAACCGTGTCTCCTCCTCCATCCTCGCTTCCGCCGTCCTCCTCTCCGCCTCCCACCAGCCACCGCTGGGAGTGGGAGAGTCAGTGCCAGCCGTGGGAGGCCTTCCCGCACAACCCGCTCTCCAGGCTGCACGCGGCTACGTGATCAGCCAGCAGCCTGCCCAGGGCCACAGGCCAGCACCGCCCAGGAGATGGCACAAGGCGCAGGTGCATGCCAGCAGAGCTCGCCAGCCAGTCCAGCCAGCGCTGCCAGGTGCGAGGCAGCATGCAGGCATGTTCATGGACAGGCAGTGGGCAGAGCATGCAGCGGGTGCCACGAGGGAGGCAGCAGAGGGCACAGCACAGCACAGCCAGCAGCTCATGGCAGGCGGGGGAGTGCGACCTGCGGGGTGGCTCCGGCGAGACGGAGCGGTGCTACTGGCCATGGCTCGTCGGCGACGGCGATGTGCCAGTGTACTGAGAAGAAGTGAAGCTTGTGATATTATATTATTTTCAAAAA]
consensusID : consensus_13777#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 496 fasta sequence
[GGCTCCCTGCAGGCTTAACGTGGATCTACCGCGCCCTTGCACCAGGGCCACAGGGCCCGCGCCGCCCCGGTAGATTGGCCACATAGGCACGGTTGCTTCCGCCGATGCTTTTCCTCCATGTCCAGGCCAGCTGCTGCCACGGTGCGAGGCAGCTTCAGGCATGTTCATGGACAGGCAGTGGGCAGAGCTGCACGCAGGGTGCCACAGAGGGAGGCCGCAAGAGGGCCACGCACATGCACACGCCAGCAGCTTCATGGCGGGCAGGGGGAGTGCAGACCTTGCAGGGGTGGCTCCGGCGAGACGGACAGGTGCTACTGGCCACTGGCTCGTCGGCAGACAGGCGATGTGCCAGTGTACTGAGAAGAAGTGAAGCATTGTGATATTATATTATTTTCAAAAAAAAAAATGTGGAGATTGTGATATGTAAGTTTTCAGAATAAATTTGCATCGGTGGATTGATCTGATATATTCAGATCGTCTCATTCCAAAAAAAAAA]
[+] EMBL BI795039 [GGCTCCCTGCAGGCTTAACGTGGATCTACCGCGCCCTTGCACCAGGGCCACAGGGCCCGCGCCGCCCCGGTAGATTGGCCACATAGGCACGGTTGCTTCCGCCGATGCTTTTCCTCCATGTCCAGGCCAGCTGCTGCCACGGTGCGAGGCAGCTTCAGGCATGTTCATGGACAGGCAGTGGGCAGAGCTGCACGCAGGGTGCCACAGAGGGAGGCCGCAAGAGGGCCACGCACATGCACACGCCAGCAGCTTCATGGCGGGCAGGGGGAGTGCAGACCTTGCAGGGGTGGCTCCGGCGAGACGGACAGGTGCTACTGGCCACTGGCTCGTCGGCAGACAGGCGATGTGCCAGTGTACTGAGAAGAAGTGAAGCATTGTGATATTATATTATTTTCAAAAAAAAAAATGTGGAGATTGTGATATGTAAGTTTTCAGAATAAATTTGCATCGGTGGATTGATCTGATATATTCAGATCGTCTCATTCCAAAAAAAAAA]
consensusID : consensus_13777#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 362 fasta sequence
[CTACGTGATCAGCCTGCAGCCTGCCCAGGGCACACGGTCCAGCATCACAGCCACGGAGATGGCCAAGGCAGCGGTGCTGCCGCGAGCTCGCCAGCCAGTCCAGCCAGCAGCTGCCAGAGTGCAGAGGCAGCTGCGGCATGTTCATGGACAGGCGTGGGCAGAGCATGCGCAGGGTGCCACAGAGGGAGGCGCAGAGGGCCAGCCAGCCAGCACAGCGCTCATGGCGGCAGGGGGAGTGCGACCTGTCGGGGTGGCTCCGACGAGACGGAGCGGGTGCTACTGGCCATGGCTCGTCGGCGACGGCGATGTGCCAGTGTACTGAGAAGAAGTGAAGCTTGTGATATTATATTATTTTCAAAAAA]
[+] EMBL BI797040 [CTACGTGATCAGCCTGCAGCCTGCCCAGGGCACACGGTCCAGCATCACAGCCACGGAGATGGCCAAGGCAGCGGTGCTGCCGCGAGCTCGCCAGCCAGTCCAGCCAGCAGCTGCCAGAGTGCAGAGGCAGCTGCGGCATGTTCATGGACAGGCGTGGGCAGAGCATGCGCAGGGTGCCACAGAGGGAGGCGCAGAGGGCCAGCCAGCCAGCACAGCGCTCATGGCGGCAGGGGGAGTGCGACCTGTCGGGGTGGCTCCGACGAGACGGAGCGGGTGCTACTGGCCATGGCTCGTCGGCGACGGCGATGTGCCAGTGTACTGAGAAGAAGTGAAGCTTGTGATATTATATTATTTTCAAAAAA]
consensusID : consensus_13777#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 315 fasta sequence
[TCCCCCCCGTCCACCCGCGCCCGGTGCGAGGCGCTGCGCCTGTTCATGGACGGCGTGGGCGAGCTGCGCGGGTGCCCGAGGGAGGCCCAGAGGCCCCCCCCGCGCTCATGCGCGGGGGAGTGCGACCCTGCCGGGGTGGCTCCGGCGAGACGGAGCGGTGCTACTGCCATGCTCGTCGGCGACGGCGATGTCCAGTGTACTGAGAAGAAGTGAAGCTTGTGATATTATATTATTTAAAAAAAAATGTGGAGATTGTGATATGTAAGTTTTCGAATAAGTGTGCATCGTGATGATCTGATATATTCAGATCTTCTC]
[+] EMBL BI797515 [TCCCCCCCGTCCACCCGCGCCCGGTGCGAGGCGCTGCGCCTGTTCATGGACGGCGTGGGCGAGCTGCGCGGGTGCCCGAGGGAGGCCCAGAGGCCCCCCCCGCGCTCATGCGCGGGGGAGTGCGACCCTGCCGGGGTGGCTCCGGCGAGACGGAGCGGTGCTACTGCCATGCTCGTCGGCGACGGCGATGTCCAGTGTACTGAGAAGAAGTGAAGCTTGTGATATTATATTATTTAAAAAAAAATGTGGAGATTGTGATATGTAAGTTTTCGAATAAGTGTGCATCGTGATGATCTGATATATTCAGATCTTCTC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_13777#2 ------------------------------------------------------------
consensus_13777#4 ------------------------------------------------------------
consensus_13777#1 ------------------------------------------------------------
consensus_13777#0 GGTAACCCCTGCAGGTTACCCGGTTCCGGAAATTCCCCGGGTTCGACCCACGCGTTCCGG 60
consensus_13777#3 ------------------------------------------------------------
consensus_13777#5 ------------------------------------------------------------
consensus_13777#2 ------------CCAGCGCAAGAATGGCATCCAGCTGTTCCAACCGTGTCTCCTCCTCCA 48
consensus_13777#4 ------------------------------------------------------------
consensus_13777#1 ------------------------------------------------------------
consensus_13777#0 ATATGATAGACCCAAACGCAAGAATGGCATCCAGCTGTTCCAACCGTGGTCTCCTCCTCC 120
consensus_13777#3 ------------------------------------------------------------
consensus_13777#5 ------------------------------------------------------------
consensus_13777#2 TCCTCGCTTCCGCCGTCCTCCTCTCCG--CCTCCCACCAGCCACCGCTGGGAGTGGGAGA 106
consensus_13777#4 ------------------------------------------------------------
consensus_13777#1 ----CGTCCTCCTCTCCAGGCCTTCAG--CCAGCCGGCA--CGCCGCTGGGAGTGGGAGA 52
consensus_13777#0 TCCTCGCTTCCGCCGTCCTCCTCTCCGGCCTCGCCGCCGGCCGCCGCTGGGAGTGGGAGA 180
consensus_13777#3 ------------------------------------------------------------
consensus_13777#5 ------------------------------------------------------------
consensus_13777#2 GTCAGTGCCAGCCGTGGGAGGCCTTCCC--GCACAACCCGCTCTC---CAGGC-TGCACG 160
consensus_13777#4 ------------------------------------------------------------
consensus_13777#1 GTCAGTGCCAGCCGTGGGAGCCTTTCTCCAGCACAACCCAGCTTCATCCAGGCATGCCAG 112
consensus_13777#0 GTCAGTGCCAGCCGTGGGAGGCCTTCCC--GCACAACCCGCTCTC----CGGC-TGC-CG 232
consensus_13777#3 ---------------------------------------------------GGCTCCCTG 9
consensus_13777#5 ------------------------------------------------------------
consensus_13777#2 CGGCTAC---GTGATCA-GCCAGCAGCCTGC---CCAGGGC-CACAGG-CCAGCACC--- 208
consensus_13777#4 ---CTAC---GTGATCA-GCCTGCAGCCTGC---CCAGGGCACACGGT-CCAGCATCACA 49
consensus_13777#1 CAGGCATACAGTGATCAAGCCAGCAGCACATGCACCAGGGCACACAGGGCCAGCAGCACA 172
consensus_13777#0 CGGCTAC---GTGATCA-GCC-GC-GCCTGC----CCGGGC-CACGG---CCGCGCC--- 275
consensus_13777#3 CAGGCTTAACGTGGATCTACCGCGCCCTTGC--ACCAGGGC-CACAGGGCCCGCGCCG-- 64
consensus_13777#5 ------------------------------------------------------------
consensus_13777#2 GCCCA--GGAGATGGCACAAGGCGCAGGTGCATGCCAGCAGAGC-TCGCCA--GC-CAGT 262
consensus_13777#4 GCCAC--GGAGATGGC-CAAGGCAGCGGTGC-TGCCGC--GAGC-TCGCCA--GC-CAGT 99
consensus_13777#1 GCACACAGGAGATGGCACAAGGCAGCGGTGCATGCCAGCAGAGCATCAGCACAGCACAGT 232
consensus_13777#0 GCCC---GGAGATGGC-CAAGGCG-CGGTGC-TGCCGC--GAGC-TCGCCG-----CCGT 321
consensus_13777#3 CCCCGGTAGATTGGCCACATAGGCACGGTTGCTTCCGCCGATGCTTTTCCT---CCATGT 121
consensus_13777#5 -----------------------------------------------TCCC---CCCCGT 10
* **
consensus_13777#2 CCA-GCCAGC-GC-TGCCAG-GTGC-GAGGCAGCATGCAGGCATGTTCA-TGGACAGGCA 316
consensus_13777#4 CCA-GCCAGCAGC-TGCCAGAGTGCAGAGGCAGC-TGC-GGCATGTTCA-TGGACAGGC- 153
consensus_13777#1 CCAAGCCAGCAGCATGCACAGGTGC-GAGGCAGCATGCAGGCATGTTCAATGGACAGGC- 290
consensus_13777#0 CCA-GCC-GC-GC-TGCCGG--TGC-GAGGC-GC-TGC-GGC-TGTTCA-TGGAC-GGC- 367
consensus_13777#3 CCAGGCCAGCTGC-TGCCACGGTGC-GAGGCAGC-TTCAGGCATGTTCA-TGGACAGGCA 177
consensus_13777#5 CCA--CCCGC-----GCC-CGGTGC-GAGGC-GC-TGC--GCCTGTTCA-TGGACGGC-- 54
*** ** ** ** *** ***** ** * * ** ****** ***** *
consensus_13777#2 GTGGGCAGAGCATGCAGC--GGGTGCCAC-GAGGGAGGCAGCAGAGGGCACA-GCACA-G 371
consensus_13777#4 GTGGGCAGAGCATGCGCA--GGGTGCCAC-AGAGGGAGGCGCAGAGGGC-CA-GC-CA-G 206
consensus_13777#1 GTGGGCGAAGCATGCAGCA-GGGTGCCACAGAGGGAGGCAGCAGAGGGCACA-GCACA-G 347
consensus_13777#0 GTGGGCGAGCTGCGC-----GGGTGCCC--GAGGGAGGC-GCAGAGGGC-CG-CCGCC-G 416
consensus_13777#3 GTGGGCAGAGC-TGCACGCAGGGTGCCACAGAGGGAGGCCGCAAGAGGGCCACGCACATG 236
consensus_13777#5 GTGGGC-GAGC-TGCGC---GGGTGCCC--GAGGGAGGCC-CAGAGGCCCCCCCCGCGCT 106
****** ** ******* ** * ** * * * *
consensus_13777#2 CACAGC-CAGCAGCT-CATGGCAGGC-GGGGGAGTGC-GACC-TG-CGGGGTGGCTCC-- 423
consensus_13777#4 CCAGCA-CAGC-GCT-CATGGCGGCA-GGGGGAGTGC-GACC-TGTCGGGGTGGCTCC-- 258
consensus_13777#1 CACAGCACAGCAGCT-CATGGCAGGC-GGGGGAGTGCAGACCATGCCGGGGTGGCATCAC 405
consensus_13777#0 CC-------GC-GCT-CATGGC-GGC-GGGGGAGTGC-GACC-TG-CGGGGTGGCTCC-- 460
consensus_13777#3 CACACGCCAGCAGCTTCATGGCGGGCAGGGGGAGTGCAGACCTTGCAGGGGTGGCTCC-- 294
consensus_13777#5 CATGCGC--------------------GGGGGAGTGC-GACCCTGCCGGGGTGGCTCC-- 143
* ********** **** ** ******** *
consensus_13777#2 -GGCGAGAC-GGAGCGG-TGCTAC-TGGCCAT-GGC-TCGTC-GGCGACGGC--GATGTG 474
consensus_13777#4 -GACGAGAC-GGAGCGGGTGCTAC-TGGCCAT-GGC-TCGTC-GGCGACGGC--GATGTG 310
consensus_13777#1 AGGCGAGACAGGAGCAGGTGCTACATGGCCATTGGCATCGTCAGGCGACAGGCAGATGTG 465
consensus_13777#0 -GGCGAGAC-GGAGCGG-TGCTAC-TGGCCAT-GGC-TCGTC-GGCGACGGC--GATGTG 511
consensus_13777#3 -GGCGAGAC-GGACAGG-TGCTAC-TGGCCACTGGC-TCGTCGGCAGACAGGC-GATGTG 348
consensus_13777#5 -GGCGAGAC-GGAGCGG-TGCTAC-TG-CCAT--GC-TCGTCGGC-GAC-GGC-GATGT- 191
* ****** *** * ****** ** *** ** ***** * *** * *****
consensus_13777#2 CCA-GTGTACTGAGAAGAAGTGAAGC-TTGTGATATTATATTATTTTCA-AAAA------ 525
consensus_13777#4 CCA-GTGTACTGAGAAGAAGTGAAGC-TTGTGATATTATATTATTTTCA-AAAAA----- 362
consensus_13777#1 CCAAGTGTACTGAGAAGAAGTGAAGC-TTGTGATATTATATTATTTTCA-AAAAAAAAAT 523
consensus_13777#0 CCA-GTGTACTGAGAAGAAGTGAAGC-TTGTGATATTATATTATTTTCA-AAAAAAAAAT 568
consensus_13777#3 CCA-GTGTACTGAGAAGAAGTGAAGCATTGTGATATTATATTATTTTCAAAAAAAAAAAT 407
consensus_13777#5 CCA-GTGTACTGAGAAGAAGTGAAGC-TTGTGATATTATATTATTT----AAAAAAAAAT 245
*** ********************** ******************* ****
consensus_13777#2 ------------------------------------------------------------
consensus_13777#4 ------------------------------------------------------------
consensus_13777#1 GTGGAGATTGTGATATGTAAGTTTTCGAATAAAGTGTTGCATCGGTGGATTGATCTGATA 583
consensus_13777#0 GTGGAGATTGTGATATGTAAGTTTTCGAATAAAGTGTTGCATCGGTGGATTGATCTGATA 628
consensus_13777#3 GTGGAGATTGTGATATGTAAGTTTTCAGAATAAAT-TTGCATCGGTGGATTGATCTGATA 466
consensus_13777#5 GTGGAGATTGTGATATGTAAGTTTTC-GAATAAGT-GTGCATCG-TGA--TGATCTGATA 300
consensus_13777#2 ------------------------------------------------------------
consensus_13777#4 ------------------------------------------------------------
consensus_13777#1 AAAAAAA----------------------------------------------------- 590
consensus_13777#0 TATTCAGATCGTCTCATTCAAATGCTTGCGAACTGAATTAATATTAAACGAATAATTGAA 688
consensus_13777#3 TATTCAGATCGTCTCATTCCAAAAAAAAAA------------------------------ 496
consensus_13777#5 TATTCAGATCTTCTC--------------------------------------------- 315
consensus_13777#2 ------------------------------------------------------------
consensus_13777#4 ------------------------------------------------------------
consensus_13777#1 ------------------------------------------------------------
consensus_13777#0 TTAATATTAAAAAAAAAAAAAGCGGCCCCCCCTTTTTTTTTTTTTTTTTTTTTTTTTTTT 748
consensus_13777#3 ------------------------------------------------------------
consensus_13777#5 ------------------------------------------------------------
consensus_13777#2 ------------------------------------------------------------
consensus_13777#4 ------------------------------------------------------------
consensus_13777#1 ------------------------------------------------------------
consensus_13777#0 TTTTTTTTTTTTTTTTATAGTAACTTGTAAAAGATTAGGAGTATCAAAAAGGCAGGCACG 808
consensus_13777#3 ------------------------------------------------------------
consensus_13777#5 ------------------------------------------------------------
consensus_13777#2 ------------------------------------------------------------
consensus_13777#4 ------------------------------------------------------------
consensus_13777#1 ------------------------------------------------------------
consensus_13777#0 CATCATGCAAGATTCTGAGCCATCATACGATGGAGAAAAGTACAGCAGCTCACTCAGTCG 868
consensus_13777#3 ------------------------------------------------------------
consensus_13777#5 ------------------------------------------------------------
consensus_13777#2 ----------
consensus_13777#4 ----------
consensus_13777#1 ----------
consensus_13777#0 CCAAAAAAAA 878
consensus_13777#3 ----------
consensus_13777#5 ----------
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||