|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13793#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 2572 fasta sequence
[CCGGCGTCGCTGCCGTCGTCTATGCAGGCGGAGGGAAGCAAGCGGCGCGTGAGGAAGCGCGACCCGCGGCTGGTTTGCCCGAACTACCTCGCCGGGAGGGTGCCGTGCGCGTGCCCCGAGATTGACGAGATGGCGGCCGCCTTGGAGGTCGAGGACGTGGCCACAGAGTTGCTGGCAGGGGCGCGGAAGAAGCCGAAGGGTGCCGGCCGTGGTAGTGGTGCGGCAGTCGGCGGAAGTGGTGGAGGGGCTAGCCGTGGGACACCGGCCGAGATGAAGTGCCAGGTGCCTGGTTGTGAGGCGGACATACGTGAGCTGAAGGGATACCACCGCCGGCACAGGGTGTGTTTGCGCTGCGCGCACGCCGCCGCTGTCATGCTTGATGGTGTCCAGAAGCGCTATTGCCAGCAGTGTGGCAAGTTTCATATATTACTAGATTTCGATGAAGATAAAAGGAGTTGTAGAAGGAAATTGGAGCGGCACAACAAAAGAAGACGAAGAAAACCTGATTCCAAAGGCATATTGGAGAAAGATATAGATGACCAGTTGGATTTTTCAGCAGATGGTAGTGGTGATGGTGAACTAAGAGAAGAGAACATAGATGTCACTACCAGTGAGACGCTTGAGACTGTTCTGAGCAATAAGGTTTTGGACAGGGAAACACCTGTGGGTTCCGATGATGTGCTTAGTTCTCCAACATGTGCACAACCCAGTTTGCAAATCGACCAAAGTAAAAGCTTAGTGACTTTCGCTGCTTCTGTTGAAGCCTGCCTTGGCACTAAACAGGAAAACACCAAACTTACCAATTCTCCTGTGCATGACACAAAGAGTACTTACTCATCCTCGTGTCCCACAGGACGTGTATCATTCAAGTTGTACGATTGGAATCCTGCTGAATTTCCTCGACGCTTACGCCACCAAATATTTGAGTGGCTTTCTAGCATGCCTGTTGAACTGGAGGGCTATATTCGTCCTGGTTGTACAATTTTAACTGTATTTGTTGCAATGCCACAACATATGTGGGACAAGTTATCCGAAGACACAGGAAATCTTGTCAAAAGCTTGGTAAATGCTCCAAATAGTCTCCTGTTGGGTAAAGGGGCCTTCTTTATCCATGTCAATAATATGATATTTCAAGTATTGAAAGATGGTGCAACATTGACCAGTACCAGATTAGAGGTACAGTCCCCGAGGATTCACTATGTTCATCCATCATGGTTTGAAGCAGGAAAGCCCATCGATCTTATTCTTTGTGGAAGTTCTCTTGATCAGCCTAAATTCAGGTCACTTGTGTCATTTGATGGACTGTACTTGAAGCATGATTGTCGCCGTATACTGTCACATGAGACCTTTGATTGTATTGGAAGTGGGGAACATATACTTGATTCTCAACATGAAATATTCCGGATAAATATTACCACATCAAAGCTGGATACTCATGGACCCGCATTTGTGGAAGTGGAAAACATGTTTGGGCTATCAAATTTTGTTCCTATCCTTGTTGGTAGCAAGCATTTATGTTCTGAACTAGAGCAGATACATGATGCTCTGTGTGGTTCTTCGGACATAAGTTCTGATCCTTGTGAGCTTCGAGGACTTCGACAGACTGCAATGTTGGGATTCCTCATCGACATTGGATGGCTAATAAGGAAGCCATCCATAGATGAATTTCAAAACCTACTGAGTTTAGCAAATATCCAGAGATGGATATGCATGATGAAATTCCTGATACAGAACGATTTTATCAATGTTCTGGAAATAATAGTGAACTCGTTGGACAACATCATAGGGTCAGAGCTTCTTTCTAACTTGGAAAAGGGTAGACTGGAAAATCATGTAACAGAATTTCTTGGGTATGTAAGCGAAGCTCGAAACATTGTTGATAATAGACCTAAATATGACAAGCAGAGACAGGTTGATACAAGATGGGCAGGTGATTATGCTCCAAACCAGCCAAAGTTGGGCATTTCTGTGCCACTTGCTGAAAGTACTGGAACCAGTGGAGAACATGATTTGCACTCAACCAATGCAGCTTCTGGAGAGGAGGAAAATATGCCTCTAGTGACTAAAGCTCTCCCACACAGGCAATGCTGTCACCCTGAGA-CTAGTGCTAGATGGCTTAACGCTGCCTCCATTGGTGCTTTTCCAGGTGGTGCCATGAGAATGCGTCTTGCCA-CCA-CTGTGGTAATTGGTGCTGTGGTATGTTTTGCAGCTTGTGTTGTCCTTTTCCACCCA-CA-CAGAGTAGGGGTGCTTGCCGCGCCAGTAAAGAGGTACTTGTCTAGGAACTACTCATCATAGTTGAAGCTAGATTAGATTAACCTTCCTGTTGCTTTTCCCCTGTATCATATGCATGTACCTTTCTAATTTGAGGCTTAGCTTGTGCATCCGATGTTCAAATATTTGTAAGAGGACCCA-CAGGCATAAATGCAAATTTTTGCAGCTTTTTTTGGCAAAAAGTATGAGCATATAGTTGCCTGAAGACCTGAACTTCCAG-GTACACACC-AAA-TGTAATAGATGTAATGGTTCAAAGA-C-AGTGATTGGAATTTTTCATGATCTACATACACTAAAAAAAAAA]
[+] EMBL AK100057 [CCGGCGTCGCTGCCGTCGTCTATGCAGGCGGAGGGAAGCAAGCGGCGCGTGAGGAAGCGCGACCCGCGGCTGGTTTGCCCGAACTACCTCGCCGGGAGGGTGCCGTGCGCGTGCCCCGAGATTGACGAGATGGCGGCCGCCTTGGAGGTCGAGGACGTGGCCACAGAGTTGCTGGCAGGGGCGCGGAAGAAGCCGAAGGGTGCCGGCCGTGGTAGTGGTGCGGCAGTCGGCGGAAGTGGTGGAGGGGCTAGCCGTGGGACACCGGCCGAGATGAAGTGCCAGGTGCCTGGTTGTGAGGCGGACATACGTGAGCTGAAGGGATACCACCGCCGGCACAGGGTGTGTTTGCGCTGCGCGCACGCCGCCGCTGTCATGCTTGATGGTGTCCAGAAGCGCTATTGCCAGCAGTGTGGCAAGTTTCATATATTACTAGATTTCGATGAAGATAAAAGGAGTTGTAGAAGGAAATTGGAGCGGCACAACAAAAGAAGACGAAGAAAACCTGATTCCAAAGGCATATTGGAGAAAGATATAGATGACCAGTTGGATTTTTCAGCAGATGGTAGTGGTGATGGTGAACTAAGAGAAGAGAACATAGATGTCACTACCAGTGAGACGCTTGAGACTGTTCTGAGCAATAAGGTTTTGGACAGGGAAACACCTGTGGGTTCCGATGATGTGCTTAGTTCTCCAACATGTGCACAACCCAGTTTGCAAATCGACCAAAGTAAAAGCTTAGTGACTTTCGCTGCTTCTGTTGAAGCCTGCCTTGGCACTAAACAGGAAAACACCAAACTTACCAATTCTCCTGTGCATGACACAAAGAGTACTTACTCATCCTCGTGTCCCACAGGACGTGTATCATTCAAGTTGTACGATTGGAATCCTGCTGAATTTCCTCGACGCTTACGCCACCAAATATTTGAGTGGCTTTCTAGCATGCCTGTTGAACTGGAGGGCTATATTCGTCCTGGTTGTACAATTTTAACTGTATTTGTTGCAATGCCACAACATATGTGGGACAAGTTATCCGAAGACACAGGAAATCTTGTCAAAAGCTTGGTAAATGCTCCAAATAGTCTCCTGTTGGGTAAAGGGGCCTTCTTTATCCATGTCAATAATATGATATTTCAAGTATTGAAAGATGGTGCAACATTGACCAGTACCAGATTAGAGGTACAGTCCCCGAGGATTCACTATGTTCATCCATCATGGTTTGAAGCAGGAAAGCCCATCGATCTTATTCTTTGTGGAAGTTCTCTTGATCAGCCTAAATTCAGGTCACTTGTGTCATTTGATGGGCTGTACTTGAAGCATGATTGTCGCCGTATACTGTCACATGAGACCTTTGATTGTATTGGAAGTGGGGAACATATACTTGATTCTCAACATGAAATATTCCGGATAAATATTACCACATCAAAGCTGGATACTCATGGACCCGCATTTGTGGAAGTGGAAAACATGTTTGGGCTATCAAATTTTGTTCCTATCCTTGTTGGTAGCAAGCATTTATGTTCTGAACTAGAGCAGATACATGATGCTCTGTGTGGTTCTTCGGACATAAGTTCTGATCCTTGTGAGCTTCGAGGACTTCGACAGACTGCAATGTTGGGATTCCTCATCGACATTGGATGGCTAATAAGGAAGCCATCCATAGATGAATTTCAAAACCTACTGAGTTTAGCAAATATCCAGAGATGGATATGCATGATGAAATTCCTGATACAGAACGATTTTATCAATGTTCTGGAAATAATAGTGAACTCGTTGGACAACATCATAGGGTCAGAGCTTCTTTCTAACTTGGAAAAGGGTAGACTGGAAAATCATGTAACAGAATTTCTTGGGTATGCAAGCGAAGCTCGAAACATTGTTGATAATAGACCTAAATATGACAAGCAGAGACAGGTTGATACAAGATGGGCAGGTGATTATGCTCCAAACCAGCCAAAGTTGGGCATTTCTGTGCCACTTGCTGAAAGTACTGGAACCAGTGGAGAACATGATTTGCACTCAACCAATGCAGCTTCTGGAGAGGAGGAAAATATGCCTCTAGTGACTAAAGCTCTCCCACACAGGCAATGCTGTCACCCTGAGA CTAGTGCTAGATGGCTTAACGCTGCCTCCATTGGTGCTTTTCCAGGTGGTGCCATGAGAATGCGTCTTGCCA CCA CTGTGGTAATTGGTGCTGTGGTATGTTTTGCAGCTTGTGTTGTCCTTTTCCACCCA CA CAGAGTAGGGGTGCTTGCCGCGCCAGTAAAGAGGTACTTGTCTAGGAACTACTCATCATAGTTGAAGCTAGATTAGATTAACCTTCCTGTTGCTTTTCCCCTGTATCATATGCATGTACCTTTCTAATTTGAGGCTTAGCTTGTGCATCCGATGTTCAAATATTTGTAAGAGGACCCA CAGACATAAATGCAAATTTTTGCAGC ]
[+] EMBL CB648210 [ CGGACATACGTGAGCTGAAGGGATACCACCGCCGGCACAGGGTGTGTTTGCGCTGCGCGCACGCCGCCGCTGTCATGCTTGATGGTGTCCAGAAGCGCTATTGCCAGCAGTGTGGCAAGTTTCATATATTACTAGATTTCGATGAAGATAAAAGGAGTTGTAGAAGGAAATTGGAGCGGCACAACAAAAGAAGACGAAGAAAACCTGATTCCAAAGGCATATTGGAGAAAGATATAGATGACCAGTTGGATTTTTCAGCAGATGGTAGTGGTGATGGTGAACTAAGAGAAGAGAACATAGATGTCACTACCAGTGAGACGCTTGAGACTGTTCTGAGCAATAAGGTTTTGGACAGGGAAACACCTGTGGGTTCCGATGATGTGCTTAGTTCTCCAACATGTGCACAACCCAGTTTGCAAATCGACCAAAGTAAAAGCTTAGTGACTTTCGCTGCTTCTGTTGAAGCCTGCCTTGGCACTAAACAGGAAAACACCAAACTTACCAATTCTCCTGTGCATGACACAAAGAGTACTTACTCATCCTCGTGTCCCACAGGACGTGTATCATTCAAGTTGTACGATTGGAATCCTGCTGAATTTCCTCGACGCTTACGCCACCAAATATTTGAGTGGCTTTCTAGCATGCCTGTTGAACTGGAGGGCTATATTCGTCCTGGTTGTACAATTTTAACTGTATTTGTTGCAATGCCACAACATATGTGGGACAAGTTATCCGAAGACACAGGAAATCTTGTCAAAAGCTTGGTAAATGCTCCAAATAGTCT ]
[+] EMBL CB676017 [ AGAAGGAAATTGGAGCGGCACAACAAAAGAAGACGAAGAAAACCTGATTCCAAAGGCATATTGGAGAAAGATATAGATGACCAGTTGGATTTTTCAGCAGATGGTAGTGGTGATGGTGAACTAAGAGAAGAGAACATAGATGTCACTACCAGTGAGACGCTTGAGACTGTTCTGAGCAATAAGGTTTTGGACAGGGAAACACCTGTGGGTTCCGATGATGTGCTTAGTTCTCCAACATGTGCACAACCCAGTTTGCAAATCGACCAAAGTAAAAGCTTAGTGACTTTCGCTGCTTCTGTTGAAGCCTGCCTTGGCACTAAACAGGAAAACACCAAACTTACCAATTCTCCTGTGCATGACACAAAGAGTACTTACTCATCCTCGTGTCCCACAGGACGTGTATCATTCAAGTTGTACGATTGGAATCCTGCTGAATTTCCTCGACGCTTACGCCACCAAATATTTGAGTGGCTTTCTAGCATGCCTGTTGAACTGGAGGGCTATATTCGTCCTGGTTGTACAATTTTAACTGTATTTGTTGCAATGCCACAACATATGTGGGACAAGTTATCCGAAGACACAGGAAATCTTGTCAAAAGCTTGGTAAATGCTCCAAATAGTCTCCTGTTGGGTAAAGGGGCCTTCTTTATCCATGTCAATAATATGATATTTCAAGTATTGAAAGATGGTGCAACATTGACCAGTACCAGATTAGAGGTACAGTCCCCGAGGATTCACTATGTTCATCCATCATGGTTTGAAGCAGGAAAGCCCATCG ]
[+] EMBL CF197231 [ CAATAAGGTTTTGGACAGGGAAACACCTGTGGGTTCCGATGATGTGCTTAGTTCTCCAACATGTGCACAACCCAGTTTGCAAATCGACCAAAGTAAAAGCTTAGTGACTTTTGCTGCTTCTGTTGAAGCCTGCCTTGGCACTAAACAGGAAAACACCAAACTTACCAATTCTCCTGTGCATGACACAAAGAGTACTTACTCATCCTCGTGTCCCACAGGACGTGTATCATTCAAGTTGTACGATTGGAATCCTGCTGAATTTCCTCGACGCTTACGCCACCAAATATTTGAGTGGCTTTCTAGCATGCCTGTTGAACTGGAGGGCTATATTCGTCCTGGTTGTACAATTTTAACTGTATTTGTTGCAATGCCACAACATATGTGGGACAAGTTATCCGAAGACACAGGAAATCTTGTCAAAAGCTTGGTAAATGCTCCAAATAGTCTCCTGTTGGGTAANNNNNNNTTCTTTATCCATGTCAATAATATGATATTTCAAGTATTGAANNNTNNTGCAACATT ]
[+] EMBL CB678648 [ CTCGACCCTTACGCCACCAAATATTTGAGTGGCTTTCTAGCATGCCTGTTGAACTGGAGGGCTATATTCGTCCTGGTTGTACAATTTTAACTGTATTTGTTGCAATGCCACAACATATGTGGGACAAGTTATCCGAAGACACAGGAAATCTTGTCAAAAGCTTGGTAAATGCTCCAAATAGTCTCCTGTTGGGTAAAGGGGCCTTCTTTATCCATGTCAATAATATGATATTTCAAGTATTGAAAGATGGTGCAACATTGACCAGTACCAGATTAGAGGTACAGTCCCCGAGGATTCACTATGTTCATCCATCATGGTTTGAAGCAGGAAAGCCCATCGATCTTATTCTTTGTGGAAGTTCTCTTGATCAGCCTAAATTCAGGTCACTTGTGTCATTTGATGGACTGTACTTGAAGCATGATTGTCGCCGTATACTGTCACATGAGACCTTTGATTGTATTGGAAGTGGGGAACATATACTTGATTCTCAACATGAAATATTCCGGATAAATATTACCACATCAAAGCTGGATACTCATGGACCCGCATTTGTGGAAGTGGAAAACATGTTTGGGCTATCAAATTTTGTTCCTATCCTTGTTGGTAGCAAGCATTTATGTTCTGAACTAGAGCAGATACATGATGCTCTGTGTGGTTCTTCGGACATAAGTTCTGATCCTTGTGAGCTTCGAGGACTTCGACAGACTGCAATGTTGGGATTCCTCATCGACATTGGATGGCTAATAAGGAAGCCATCCATAGATGAATTT ]
[+] EMBL CB624161 [ TCTATCATGCCTGTTGAACTGGAGGGCTATATTCGTCCTGGTTGTACAATTTTAACTGTATTTGTTGCAATGCCACAACATATGTGGGACAAGTTATCCGAAGACACAGGAAATCTTGTCAAAAGCTTGGTAAATGCTCCAAATAGTCTCCTGTTGGGTAAAGGGGCCTTCTTTATCCATGTCAATAATATGATATTTCAAGTATTGAAAGATGGTGCAACATTGACCAGTACCAGATTAGAGGTACAGTCCCCGAGGATTCACTATGTTCATCCATCATGGTTTGAAGCAGGAAAGCCCATCGATCTTATTCTTTGTGGAAGTTCTCTTGATCAGCCTAAATTCAGGTCACTTGTGTCATTTGATGGACTGTACTTGAAGCATGATTGTCGCCGTATACTGTCACATGAGACCTTTGATTGTATTGGAAGTGGGGAACATATACTTGATTCTCAACATGAAATATTCCGGATAAATATTACCACATCAAAGCTGGATACTCATGGACCCGCATTTGTGGAAGTGGAAAACATGTTTGGGCTATCAAATTTTGTTCCTATCCTTGTTGGTAGCAAGCATTTATGTTCTGAACTAGAGCAGATACATGATGCTCTGTGTGGTTCTTCGGACATAAGTTCTGATCCTTGTGAGCTTCGAGGACTTCGACAGACTGCAATGTTGGGATTCCTCATCGACATTGGATGGCTAATAAGGAAGCCATCCATAGATGAATTTCAAAACC ]
[-] EMBL CB669585 [ ATATGCATGATGAAATTCCTGATACAGAACGATTTTATCAATGTTCTGGAAATAATAGTGAACTCGTTGGACAACATCATAGGGTCAGAGCTTCTTTCTAACTTGGAAAAGGGTAGACTGGAAAATCATGTAACAGAATTTCTTGGGTATGTAAGCGAAGCTCGAAACATTGTTGATAATAGACCTAAATATGACAAGCAGAGACAGGTTGATACAAGATGGGCAGGTGATTATGCTCCAAACCAGCCAAAGTTGGGCATTTCTGTGCCACTTGCTGAAAGTACTGGAACCAGTGGAGAACATGATTTGCACTCAACCAATGCAGCTTCTGGAGAGGAGGAAAATATGCCTCTAGTGACTAAAGCTCTCCCACACAGGCAATGCTGTCACCCTGAGA CTAGTGCTAGATGGCTTAACGCTGCCTCCATTGGTGCTTTTCCAGGTGGTGCCATGAGAATGCGTCTTGCCA CCA CTGTGGTAATTGGTGCTGTGGTATGTTTTGCAGCTTGTGTTGTCCTTTTCCACCCA CA CAGAGTAGGGGTGCTTGCCGCGCCAGTAAAGAGGTACTTGTCTAGGAACTACTCATCATAGTTGAAGCTAGATTAGATTAACCTTCCTGTTGCTTTTCCCCTGTATCATATGCATGTACCTTTCTAATTTGAGGCTTAGCTTGTGCATCCGATGTTCAAATATTTGTAAGAGGACCCA CAGGCATAAATGCAAATTTTTGCAGCTTTTTTTGGCAAAAAGTATGAGCATATAGTTGCCTGAAGACCTGAACTTCCAG GTACACACC AAA TGTAATAGATGTAATGG ]
[-] EMBL CB648211 [ AGGGTCAGAGCTTCTTTTTAACTTGGAAAAGGGTAGACTGGAAAATCATGTAACAGAATTTCTTGGGTATGTAAGCGAAGCTCGAAACATTGTTGATAATAGACCTAAATATGACAAGCAGAGACAGGTTGATACAAGATGGGCAGGTGATTATGCTCCAAACCAGCCAAAGTTGGGCATTTCTGTGCCACTTGCTGAAAGTACTGGAACCAGTGGAGAACATGATTTGCACTCAACCAATGCAGCTTCTGGAGAGGAGGAAAATATGCCTCTAGTGACTAAAGCTCTCCCACACAGGCAATGCTGTCACCCTGAGA CTAGTGCTAGATGGCTTAACGCTGCCTCCATTGGTGCTTTTCCAGGTGGTGCCATGAGAATGCGTCTTGCCA CCA CTGTGGTAATTGGTGCTGTGGTATGTTTTGCAGCTTGTGTTGTCCTTTTCCACCCA CA CAGAGTAGGGGTGCTTGCCGCGCCAGTAAAGAGGTACTTGTCTAGGAACTACTCATCATAGTTGAAGCTAGATTAGATTAACCTTCCTGTTGCTTTTCCCCTGTATCATATGCATGTACCTTTTTAATTTGAGGCTTAGCTTGTGCATCCGATGTTCAAATATTTGTAAGAGGACCCA CAGGCATAAATGCAAATTTTTGCAGCTTTTTTTGGCAAAAAGTATGAGCATATAGTTGCCTGAAGACCTGAACTTCCAG GTACACACC AAA TGTAATAGATGTAATGGTTCAAAGACC AGTGATTGGAATTTTTC ]
[-] EMBL CA761230 [ GAGCTTCTTTCTAACTTGGAAAAGGGTAGGCTGGAAAATCATGTAACAGAATTTCTTGGGTATGTAAGCGAAGCTCGAAACATTGTTGATAATAGACCTAAATATGACAAGCAGAGACAGGTTGATACAAGATGGGCAGGTGATTATGCTCCAAACCAGCCAAAGTTGGGCATTTCTGTGCCACTTGCTGAAAGTACTGGAACCAGTGGAGAACATGATTTGCACACAACCAATGCAGCTTCTGGAGAGGAGGAAAATATGCCTCCAGTGACTAAAGCTCTCCCACACAGGCAATGCTGTCACCCTGAGA CTAGTGCTAGATGGCTTAACGCTGCCTCCATTGGTGCTTTTCCAGGTGGTGCCATGAGAATGCGTCTTGCCA CCA CTGTGGTAATTGGTGCTGTGGTATGTTTTGCAGCTTGTGTTGTCCTTTTCCACCCA CA CAGAGTAGGGGTGCTTGCCGCGCCAGTAAAGAGGTACTTGTCTAGGAACTACTCATCATAGTTGAAGCTAGATTAGATTAACCTTCCTGTTGCTTTTCCCCTGTATCATATGCATGTACCTTTCTAATTTGAGGCTTAGCTTGTGCATCCGATGTTCAAATATTTGTAAGAGGACCCA CAGGCATAAATGCAAATTTTTGCAG TTTTTTTGGCAAAAAaaaaaaa ]
[-] EMBL CA761711 [ GAGCTTCTTTCTAACTTGGAAAAGGGTAGGCTGGAAAATCATGTAACAGAATTTCTTGGGTATGTAAGCGAAGCTCGAAACATTGTTGATAATAGACCTAAATATGACAAGCAGAGACAGGTTGATACAAGATGGGCAGGTGATTATGCTCCAAACCAGCCAAAGTTGGGCATTTCTGTGCCACTTGCTGAAAGTACTGGAACCAGTGGAGAACATGATTTGCACACAACCAATGCAGCTTCTGGAGAGGAGGAAAATATGCCTCCAGTGACTAAAGCTCTCCCACACAGGCAATGCTGTCACCCTGAGA CTAGTGCTAGATGGCTTAACGCTGCCTCCATTGGTGCTTTTCCAGGTGGTGCCATGAGAATGCGTCTTGCCA CCA CTGTGGTAATTGGTGCTGTGGTATGTTTTGCAGCTTGTGTTGTCCTTTTCCACCCA CA CAGAGTAGGGGTGCTTGCCGCGCCAGTAAAGAGGTACTTGTCTAGGAACTACTCATCATAGTTGAAGCTAGATTAGATTAACCTTCCTGTTGCTTTTCCCCTGTATCATATGCATGTACCTTTCTAATTTGAGGCTTAGCTTGTGCATCCGATGTTCAAATATTTGTAAGAGGACCCA CAGGCATAAATGCAAATTTTTGCAG TTTTTTTGGCAAAAAaaaaaaa ]
[-] EMBL CB624162 [ TGGAAAATCATGTAACAGAATTTCTTGGGTATGTAAGCGAAGCTCGAAACATTGTTGATAATAGACCTAAATATGACAAGCAGAGACAGGTTGATACAAGATGGGCAGGTGATTATGCTCCAAACCAGCCAAAGTTGGGCATTTTTGTGCCACTTGTTGTAAGTACTGGAACCAGTGGAGAACATGATTTGCACACATCCAATGCAGCTTCTGGAGAGGAGGAAAATATGCCTCTAGTGACTAAAGCTCTCCCACACAGGCAATGCTGTCACCCTGAGATCTAGTGTTAGATGGCTTAACGCTGCCTCCATTGGTGCTTTTCCAGGTGGTGCCATGAGAATGCGTCTTGCCA CCA CTGTGGTAATTGGTGCTGTGGTATGTTTTGCAGCTTGTGTTGTCCTTTTCCACCCA CA CAGAGTAGGGGTGCTTGCCGCGCCAGTAAAGAGGTACTTGTGTAGGAACTCCTCATCATAGTTGAAGCTAGATTAGATTAACCTTCCTGTTGCTTTTCCCCTGTATCATATGCATGTCCCTTTGTAATTTGAGGCTTAGATTGTGCATCCGATGTTCAAATATTTCTAAGAGGACCCA CAGGCATAAATGCAAATTTTTGCAGCTTTTTTTGGCAAAAAGTATGAGCATATAGTTGCCTGAAGACCTGAACTTGCAGCGTACACACCTAAACTGTAATAGATGTAATGGTTCAAAGA CGAGTGATTGGAATTTTTCATGATCTA ]
[-] EMBL CB637426 [ GTTGATACAAGATGGGCAGGTGATTATGATCCAAACCAGCCAAAGTTGGGCATTTCTGTGCCACTTGCTGAAAGTACTGGAACCAGTGGAGAACATGATTTGCACTCAACCAATGCAGCTTCTGGAGAGGAGGAAAATATGCCTCTAGTGACTAAAGCTCTCCCACACAGGCAATGCTGTCACCCTGAGA CTAGTGCTAGATGGCTTAACGCTGCCTCCATTGGTGCTTTTCCAGGTGGTGCCATGAGAATGCGTCTTGCCA CCA CTGTGGTAATTGGTGCTGTGGTATGTTTTGCAGCTTGTGTTGTCCTTTTCCACCCA CA CAGAGTAGGGGTGCTTGCCGCGCCAGTAAAGAGGTACTTGTCTAGGAACTACTCATCATAGTTGAAGCTAGATTAGATTAACCTTCCTGTTGCTTTTCCCCTGTATCATATGCATGTACCTTTCTAATTTGAGGCTTAGCTTGTGCATCCGATGTTCAAATATTTGTAAGAGGACCCA CAGGCATAAATGCAAATTTTTGCAGCTTTTTTTGGCAAAAAGTATGAGCATATAGTTGCCTGAAGACCTGAACTTCCAG GTACACACC AAA TGTAATAGATGTAATGGTTCAAAGA C AGTGATTGGAATATTTCt ]
[+] EMBL BM421186 [ ATGCTGTCCCCCTGAGA CTAGTGCTAGATGGCTTAACGCTGCCTCCATTGGTGCTTTTCCAGGTGGT CCATGAGAATGCGTCTTGCCACCCACCTGTGGTAATTGGTGCTGTGGTATGTTTTGCAGCTTGTGTTGTCCTTTTCCACCCACCACCAGAGTAGGGGTGCTTGCCGCGCCAGTAAAGAGGTACTTGTCTAGGAACTACTCATCATAGTTGAAGCTAGATTAGATTAACCTTCCTGTTGCTTTTCCCCTGTATCATATGCATGTACCTTTCTAATTTGAGGCTTAGCTTGTGCATCCGATGTTCAAATATTTGTAAGAGGACCCACCAGGCATAAATGCAAATTTTTGCAGCTTTTTTTGGCAAAAAGTATGAGCATATAGTTGCCTGAAGACCTGAACTTCCAG GTACACACC CAA TGTAATAGATGTAATGGTTCAAAGA C AGTGATTGGAATTTTTCATGATCTACATACACTAAAAAAAAAA]
consensusID : consensus_13793#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 507 fasta sequence
[AAGTGGTGGAGGGGCTAGCCGTGGGACACCGGCCGAGATGAAGTGCCAGGTGCCTGGTTGTGAGGCGGACATACGTGAGCTGAAGGGATACCACCGCCGGCACAGGGTGTGTTTGCGCTGCGCGCACGCCGCCGCTGTCATGCTTGATGGTGTCCAGAAGCGCTATTGCCATCAGTGTGGCAAAATCAGTTTGTTACTGATGGATGGTCGCTAAACTTTCTAAAAATTGCATGCCAAGCTCATTTGCAATAAAGCTAAGTCTTTTATTTCCAAATCAAATTCATATTTAAAGTTTGATTAATCTCATAAACTAAGGAACATCCTGCTTTAATGCATAAATTTTCTTGTATGTTTTTGACATGACGTAAGGTCACTGATCAAACAAACTGCAAGCATGGAAGTACCTCTGTCCTTGTGCATCTGTCCACAACCTGTTGGCCACTTGATATATTTTTGAAACATTACTTTAGCAATTGATCAAAATTCTTTGCCTAGCTCGAGGTACTA]
[+] EMBL CB637425 [AAGTGGTGGAGGGGCTAGCCGTGGGACACCGGCCGAGATGAAGTGCCAGGTGCCTGGTTGTGAGGCGGACATACGTGAGCTGAAGGGATACCACCGCCGGCACAGGGTGTGTTTGCGCTGCGCGCACGCCGCCGCTGTCATGCTTGATGGTGTCCAGAAGCGCTATTGCCATCAGTGTGGCAAAATCAGTTTGTTACTGATGGATGGTCGCTAAACTTTCTAAAAATTGCATGCCAAGCTCATTTGCAATAAAGCTAAGTCTTTTATTTCCAAATCAAATTCATATTTAAAGTTTGATTAATCTCATAAACTAAGGAACATCCTGCTTTAATGCATAAATTTTCTTGTATGTTTTTGACATGACGTAAGGTCACTGATCAAACAAACTGCAAGCATGGAAGTACCTCTGTCCTTGTGCATCTGTCCACAACCTGTTGGCCACTTGATATATTTTTGAAACATTACTTTAGCAATTGATCAAAATTCTTTGCCTAGCTCGAGGTACTA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_13793#0 CCGGCGTCGCTGCCGTCGTCTATGCAGGCGGAGGGAAGCAAGCGGCGCGTGAGGAAGCGC 60
consensus_13793#1 ------------------------------------------------------------
consensus_13793#0 GACCCGCGGCTGGTTTGCCCGAACTACCTCGCCGGGAGGGTGCCGTGCGCGTGCCCCGAG 120
consensus_13793#1 ------------------------------------------------------------
consensus_13793#0 ATTGACGAGATGGCGGCCGCCTTGGAGGTCGAGGACGTGGCCACAGAGTTGCTGGCAGGG 180
consensus_13793#1 ------------------------------------------------------------
consensus_13793#0 GCGCGGAAGAAGCCGAAGGGTGCCGGCCGTGGTAGTGGTGCGGCAGTCGGCGGAAGTGGT 240
consensus_13793#1 -----------------------------------------------------AAGTGGT 7
*******
consensus_13793#0 GGAGGGGCTAGCCGTGGGACACCGGCCGAGATGAAGTGCCAGGTGCCTGGTTGTGAGGCG 300
consensus_13793#1 GGAGGGGCTAGCCGTGGGACACCGGCCGAGATGAAGTGCCAGGTGCCTGGTTGTGAGGCG 67
************************************************************
consensus_13793#0 GACATACGTGAGCTGAAGGGATACCACCGCCGGCACAGGGTGTGTTTGCGCTGCGCGCAC 360
consensus_13793#1 GACATACGTGAGCTGAAGGGATACCACCGCCGGCACAGGGTGTGTTTGCGCTGCGCGCAC 127
************************************************************
consensus_13793#0 GCCGCCGCTGTCATGCTTGATGGTGTCCAGAAGCGCTATTGCCAGCAGTGTGGCAAGTTT 420
consensus_13793#1 GCCGCCGCTGTCATGCTTGATGGTGTCCAGAAGCGCTATTGCCATCAGTGTGGCAAAATC 187
******************************************** *********** *
consensus_13793#0 CATATATTACTAGATTTCGATGAAGATAAAAGGAGTTGTAGAAGGAAATTGGAGCGGCAC 480
consensus_13793#1 AGTTTGTTACTGA---TGGATGGTCGCTAAACT--TTCTAAA----AATTG------CAT 232
* * ***** * **** *** ** ** * ***** **
consensus_13793#0 AACAAAAGAAGACGAAGAAAACCTGATTCCAAAGGCATATTGGAGAAAGATATAGATGAC 540
consensus_13793#1 GCCAAGCTCATTTGCAATAAAGCTAAGTCTTT---TATTTCCAAATCAAATTCATATTTA 289
*** * * * *** ** * ** ** * * * ** * **
consensus_13793#0 CAGTTGGATTTTTCAGCAGATGGTAGTGGTGATGGTGAACTAAGAGAAGAGAACATAGAT 600
consensus_13793#1 AAGTTTGATTAATCT-CATAAACTAAGGAACATCCTGCTTTAATGCATAAATTTTCTTGT 348
**** **** ** ** * ** * ** ** *** * * *
consensus_13793#0 GTCACTACCAGTGAGACGCTTGAGACTGTTCTGAGCAATAAGGTTTTGGACAGGGAAACA 660
consensus_13793#1 AT-GTTTTTGACATGACG--TAAGGTCA--CTGATCAAACAAACTGCAAGCATGGAAGTA 403
* * **** * ** **** *** * * ** **** *
consensus_13793#0 CCTGTGGGTTCCGATGATGTGCTTAGTTCTCCAACATGTGCACAACCCAGTTTGCAAATC 720
consensus_13793#1 CCTCTGTCCT-------TGTGCATCTGTCCACAACCTGTTGGCCACTTGATATATTT--- 453
*** ** * ***** * ** **** *** * ** * *
consensus_13793#0 GACCAAAGTAAAAGCTTAGTGACTTTCGCTGCTTCTGTTGAAGCCTGCCTTG--GCACTA 778
consensus_13793#1 --TTGAAACATTACTTTAGCAATTGATCAAAATTCTTT----GCCTAGCTCGAGGTACTA 507
** * * **** * * **** * **** ** * * ****
consensus_13793#0 AACAGGAAAACACCAAACTTACCAATTCTCCTGTGCATGACACAAAGAGTACTTACTCAT 838
consensus_13793#1 ------------------------------------------------------------
consensus_13793#0 CCTCGTGTCCCACAGGACGTGTATCATTCAAGTTGTACGATTGGAATCCTGCTGAATTTC 898
consensus_13793#1 ------------------------------------------------------------
consensus_13793#0 CTCGACGCTTACGCCACCAAATATTTGAGTGGCTTTCTAGCATGCCTGTTGAACTGGAGG 958
consensus_13793#1 ------------------------------------------------------------
consensus_13793#0 GCTATATTCGTCCTGGTTGTACAATTTTAACTGTATTTGTTGCAATGCCACAACATATGT 1018
consensus_13793#1 ------------------------------------------------------------
consensus_13793#0 GGGACAAGTTATCCGAAGACACAGGAAATCTTGTCAAAAGCTTGGTAAATGCTCCAAATA 1078
consensus_13793#1 ------------------------------------------------------------
consensus_13793#0 GTCTCCTGTTGGGTAAAGGGGCCTTCTTTATCCATGTCAATAATATGATATTTCAAGTAT 1138
consensus_13793#1 ------------------------------------------------------------
consensus_13793#0 TGAAAGATGGTGCAACATTGACCAGTACCAGATTAGAGGTACAGTCCCCGAGGATTCACT 1198
consensus_13793#1 ------------------------------------------------------------
consensus_13793#0 ATGTTCATCCATCATGGTTTGAAGCAGGAAAGCCCATCGATCTTATTCTTTGTGGAAGTT 1258
consensus_13793#1 ------------------------------------------------------------
consensus_13793#0 CTCTTGATCAGCCTAAATTCAGGTCACTTGTGTCATTTGATGGACTGTACTTGAAGCATG 1318
consensus_13793#1 ------------------------------------------------------------
consensus_13793#0 ATTGTCGCCGTATACTGTCACATGAGACCTTTGATTGTATTGGAAGTGGGGAACATATAC 1378
consensus_13793#1 ------------------------------------------------------------
consensus_13793#0 TTGATTCTCAACATGAAATATTCCGGATAAATATTACCACATCAAAGCTGGATACTCATG 1438
consensus_13793#1 ------------------------------------------------------------
consensus_13793#0 GACCCGCATTTGTGGAAGTGGAAAACATGTTTGGGCTATCAAATTTTGTTCCTATCCTTG 1498
consensus_13793#1 ------------------------------------------------------------
consensus_13793#0 TTGGTAGCAAGCATTTATGTTCTGAACTAGAGCAGATACATGATGCTCTGTGTGGTTCTT 1558
consensus_13793#1 ------------------------------------------------------------
consensus_13793#0 CGGACATAAGTTCTGATCCTTGTGAGCTTCGAGGACTTCGACAGACTGCAATGTTGGGAT 1618
consensus_13793#1 ------------------------------------------------------------
consensus_13793#0 TCCTCATCGACATTGGATGGCTAATAAGGAAGCCATCCATAGATGAATTTCAAAACCTAC 1678
consensus_13793#1 ------------------------------------------------------------
consensus_13793#0 TGAGTTTAGCAAATATCCAGAGATGGATATGCATGATGAAATTCCTGATACAGAACGATT 1738
consensus_13793#1 ------------------------------------------------------------
consensus_13793#0 TTATCAATGTTCTGGAAATAATAGTGAACTCGTTGGACAACATCATAGGGTCAGAGCTTC 1798
consensus_13793#1 ------------------------------------------------------------
consensus_13793#0 TTTCTAACTTGGAAAAGGGTAGACTGGAAAATCATGTAACAGAATTTCTTGGGTATGTAA 1858
consensus_13793#1 ------------------------------------------------------------
consensus_13793#0 GCGAAGCTCGAAACATTGTTGATAATAGACCTAAATATGACAAGCAGAGACAGGTTGATA 1918
consensus_13793#1 ------------------------------------------------------------
consensus_13793#0 CAAGATGGGCAGGTGATTATGCTCCAAACCAGCCAAAGTTGGGCATTTCTGTGCCACTTG 1978
consensus_13793#1 ------------------------------------------------------------
consensus_13793#0 CTGAAAGTACTGGAACCAGTGGAGAACATGATTTGCACTCAACCAATGCAGCTTCTGGAG 2038
consensus_13793#1 ------------------------------------------------------------
consensus_13793#0 AGGAGGAAAATATGCCTCTAGTGACTAAAGCTCTCCCACACAGGCAATGCTGTCACCCTG 2098
consensus_13793#1 ------------------------------------------------------------
consensus_13793#0 AGACTAGTGCTAGATGGCTTAACGCTGCCTCCATTGGTGCTTTTCCAGGTGGTGCCATGA 2158
consensus_13793#1 ------------------------------------------------------------
consensus_13793#0 GAATGCGTCTTGCCACCACTGTGGTAATTGGTGCTGTGGTATGTTTTGCAGCTTGTGTTG 2218
consensus_13793#1 ------------------------------------------------------------
consensus_13793#0 TCCTTTTCCACCCACACAGAGTAGGGGTGCTTGCCGCGCCAGTAAAGAGGTACTTGTCTA 2278
consensus_13793#1 ------------------------------------------------------------
consensus_13793#0 GGAACTACTCATCATAGTTGAAGCTAGATTAGATTAACCTTCCTGTTGCTTTTCCCCTGT 2338
consensus_13793#1 ------------------------------------------------------------
consensus_13793#0 ATCATATGCATGTACCTTTCTAATTTGAGGCTTAGCTTGTGCATCCGATGTTCAAATATT 2398
consensus_13793#1 ------------------------------------------------------------
consensus_13793#0 TGTAAGAGGACCCACAGGCATAAATGCAAATTTTTGCAGCTTTTTTTGGCAAAAAGTATG 2458
consensus_13793#1 ------------------------------------------------------------
consensus_13793#0 AGCATATAGTTGCCTGAAGACCTGAACTTCCAGGTACACACCAAATGTAATAGATGTAAT 2518
consensus_13793#1 ------------------------------------------------------------
consensus_13793#0 GGTTCAAAGACAGTGATTGGAATTTTTCATGATCTACATACACTAAAAAAAAAA 2572
consensus_13793#1 ------------------------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||