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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13796#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 1818 fasta sequence
[CCCCCGTTCTCTCCTCCCCATCTCCAACGCACGCACGCGCCATCACCACCACCTCGACGCCGGCGGCGACGACCACGGCGACGGCAACGGCGGCGGCGGCAGAGAAGCCCTCCTCATCCCCAAGATGGACAGCCATAACTCAGCACCTCCCCAGATTGCTGAAGTGAGAATGGACATCTCATCATCTACTTCTGTAGCAGCTGGGAACAAAGTTTGCAGAGGTGCTGCTTGTGACTTTTCTGATTCCAGTAATAGCTCAAAAGATGCAAGGGAGAGAATGGCGTCAATGAGGAAGCTCATTATTGCTGTGATCCTTTGCATCATATTCATGGCGGTCGAAGTGGTTGGAGGTATCAAAGCAAACAG-TTTGGCAATCTTGACTGATGCAGCCCATCTCCTTTCGGATGTTGCGGCCTTTGCCATATCTTTGTTCTCTCTTTGGGCAGCTGGATGGGAAGCTACACCACAGCAGTCATATGGGTTTTTCCGTATAGAAATTCTTGGTGCCCTGGTTTCTATTCAGCTCATATGGCTCCTTGCTGGTATTCTTGTCTATGAAGCTATTGTAAGGCTCATTAATGAAAGTGGTGAGGTCCAGGGCTCCCTCATGTTTGCTGTCTCAGCATTTGGCTTATTTGTTAACATCATAATGGCTGTCTTGCTTGGTCATGACCATGGACATGGACACGGACATGGTCATGGGCATGGACATTCCCATGACCATGATCATGGTGGTTCTGACCATGACCATCACCACCATGAAGATCAAGAGCATGGCCATGTACATCACCACGAAGATGGCCATGGTAATTCAATTACCGTCAATCTCCATCACCATCCAGGCACTGGACACCACCACCATGATGCTGAGGAACCATTGCTCAAGAGTGATGCTGGTTGTGACAGCACCCAATCTGGTGCCAAGGATGCCAAGAAGGCTCGTCGTAATATCAATGTACACAGTGCTTATCTGCATGTGCTTGGGGATTCAATCCAGAGCATCGGTGTGATGATTGGAGGGGCTATCATCTGGTACAAGCCCGAGTGGAAGATTATTGATCTCATCTGCACCCTCATCTTCTCCGTGATCGTACTCTTCACCACAATCAAGATGCTGCGCAACATCCTTGAGGTCCTGATGGAGAGCACGCCCCGCGAGATCGATGCCACCAGCCTTGAGAATGGCCTCCGCGACATGGACGGTGTGGTTGCAGTACATGAGCTGCACATCTGGGCCATAACGGTGGGGAAGGTTCTCCTGGCGTGCCATGTGACAATCACTCAGGACGCAGACGCTGATCAAATGCTGGACAAGGTGATTGGGTACATCAAGTCTGAGTACAACATCAGCCATGT-GACCATTCAGATTGAGCGCGAGTAGG-CTTGACCGCTTGAGACAGGTAGGTAGTGTTGATGATAGAACGGATCATCTTCATCTCATCTCATGGGACCAACTTATCAGGAACCTGTTTCACTGGTTTTATGCAGTTACTGTTAGCTCTGCAGTGCAAA-TCA-GATCAGCAGAGTCCAACAATTCCTGCA-GGTTCATCTGAATGTTAGCTTCTGATGCTGTTTATTACTATAAGTACGTGTTATTAGTACTATC-TTAGTCA-ATTAGGTGAGTTGATGTTAA-T-CAGTTTCGTAGTCGGTTGTATTCACATGGGTGCAGTTTTCAGACAAGTTTTCAGGCACCTGTGAGTACGTCAACCTGCCTTCTGCGTCTGTAGTCTAGCGCCCAGCCG-TACTAGTTT-TTATGTAAATCTGCACTGGCATGGGAAATAATAACCAAGTTTCGTTTGGCCTTAAAAAAAAAAAAAA]
[+] EMBL AK100735 [CCCCCGTTCTCTCCTCCCCATCTCCAACGCACGCACGCGCCATCACCACCACCTCGACGCCGGCGGCGACGACCACGGCGACGGCAACGGCGGCGGCGGCAGAGAAGCCCTCCTCATCCCCAAGATGGACAGCCATAACTCAGCACCTCCCCAGATTGCTGAAGTGAGAATGGACATCTCATCATCTACTTCTGTAGCAGCTGGGAACAAAGTTTGCAGAGGTGCTGCTTGTGACTTTTCTGATTCCAGTAATAGCTCAAAAGATGCAAGGGAGAGAATGGCGTCAATGAGGAAGCTCATTATTGCTGTGATCCTTTGCATCATATTCATGGCGGTCGAAGTGGTTGGAGGTATCAAAGCAAACAG TTTGGCAATCTTGACTGATGCAGCCCATCTCCTTTCGGATGTTGCGGCCTTTGCCATATCTTTGTTCTCTCTTTGGGCAGCTGGATGGGAAGCTACACCACAGCAGTCATATGGGTTTTTCCGTATAGAAATTCTTGGTGCCCTGGTTTCTATTCAGCTCATATGGCTCCTTGCTGGTATTCTTGTCTATGAAGCTATTGTAAGGCTCATTAATGAAAGTGGTGAGGTCCAGGGCTCCCTCATGTTTGCTGTCTCAGCATTTGGCTTATTTGTTAACATCATAATGGCTGTCTTGCTTGGTCATGACCATGGACATGGACACGGACATGGTCATGGGCATGGACATTCCCATGACCATGATCATGGTGGTTCTGACCATGACCATCACCACCATGAAGATCAAGAGCATGGCCATGTACATCACCACGAAGATGGCCATGGTAATTCAATTACCGTCAATCTCCATCACCATCCAGGCACTGGACACCACCACCATGATGCTGAGGAACCATTGCTCAAGAGTGATGCTGGTTGTGACAGCACCCAATCTGGTGCCAAGGATGCCAAGAAGGCTCGTCGTAATATCAATGTACACAGTGCTTATCTGCATGTGCTTGGGGATTCAATCCAGAGCATCGGTGTGATGATTGGAGGGGCTATCATCTGGTACAAGCCCGAGTGGAAGATTATTGATCTCATCTGCACCCTCATCTTTTCCGTGATCGTACTCTTCACCACAATCAAGATGCTGCGCAACATCCTTGAGGTCCTGATGGAGAGCACGCCCCGCGAGATCGATGCCACCAGCCTTGAGAATGGCCTCCGCGACATGGACGGTGTGGTTGCAGTACATGAGCTGCACATCTGGGCCATAACGGTGGGGAAGGTTCTCCTGGCGTGCCATGTGACAATCACTCAGGACGCAGACGCTGATCAAATGCTGGACAAGGTGATTGGGTACATCAAGTCTGAGTACAACATCAGCCATGT GACCATTCAGATTGAGCGCGAGTAGG CTTGACCGCTTGAGACAGGTAGGTAGTGTTGATGATAGAACGGATCATCTTCATCTCATCTCATGGGACCAACTTATCAGGAACCTGTTTCACTGGTTTTATGCAGTTACTGTTAGCTCTGCAGTGCAAA TCA GATCAGCAGAGTCCAACAATTCCTGCA GGTTCATCTGAATGTTAGCTTCTGATGCTGTTTATTACTATAAGTACGTGTTATTAGTACTATC TTAGTCA ATTAGGTGAGTTGATGTTAA T CAGTTTCGTAGTCGGTTGTATTCACATGGGTGCAGTTTTCAGACAAGTTTTCAGGCACCTGTGAGTACGTCAACCTGCCTTCTGCGTCTGTAGTCTAGCGCCCAGCCG TACTAGTTT TTATGTAAATCTGCACTGGCATGGGAAATAATAACCAAGTTTC ]
[+] EMBL CF297375 [ CCCCGTTCTCTCCTCCCCATCTCCAACGCACGCACGCGCCATCACCACCACCTCGACGCCGGCGGCGACGACCACGGCGACGGCAACGGCGGCGGCGGCAGAGAAGCCCTCCTCATCCCCAAGATGGACAGCCATAACTCAGCACCTCCCCAGATTGCTGAAGTGAGAATGGACATCTCATCATCTACTTCTGTAGCAGCTGGGAACAAAGTTTGCAGAGGTGCTGCTTGTGACTTTTCTGATTCCAGTAATAGCTCAAAAGATGCAAGGGAGAGAATGGCGTCAATGAGGAAGCTCATTATTGCTGTGATCCTTTGCATCATATTCATGGCGGTCGAAGTGGTTGGAGGTATCAAAGCAAACAG TTTGGCAATCTTGACTGATGCAGCCCATCTCCTTTCGGATGTTGCGGCCTTTGCCATATCTTTGTTCTCTCTTTGGGCAGCTGGATGGGAAGCTACACCACAGCAGTCATATGGGTTTTTC ]
[+] EMBL CB643998 [ ATCTCCAACGCACGCACGCGCCATCACCACCACCTCGACGCCGGCGGCGACGACCACGGCGACGGCAACGGCGGCGGCGGCAGAGAAGCCCTCCTCATCCCCAAGATGGACAGCCATAACTCAGCACCTCCCCAGATTGCTGAAGTGAGAATGGACATCTCATCATCTACTTCTGTAGCAGCTGGGAACAAAGTTTGCAGAGGTGCTGCTTGTGACTTTTCTGATTCCAGTAATAGCTCAAAAGATGCAAGGGAGAGAATGGCGTCAATGAGGAAGCTCATTATTGCTGTGATCCTTTGCATCATATTCATGGCGGTCGAAGTGGTTGGAGGTATCAAAGCAAACAG TTTGGCAATCTTGACTGATGCAGCCCATCTCCTTTCGGATGTTGCGGCCTTTGCCATATCTTTGTTCTCTCTTTGGGCAGCTGGATGGGAAGCTACACCACAGCAGTCATATGGGTTTTTCCGTATAGAAATTCTTGGTGCCCTGGTTTCTATTCAGCTCATATGGCTCCTTGCTGGTATTCTTGTCTATGAAGCTATTGTAAGGCTCATTAATGAAAGTGGTGAGGTCCAGGGCTCCCTCATGTTTGCTGTCTCAGCATTTGGCTTATTTGTTAACATCATAATGGCTGTCTTGCTTGGTCATGACCATGGACATGGACACGGACATGGTCATGGGCATGGACATTCCCATGACCATGATCATGGTGGTTCTGACCATGACCATCACCACCATGAAGATNCAGAGCATGGCCATGTACATC ]
[+] EMBL AU070577 [ TCCAACGCACGCACGCGCCATCACCACCACCTCGACGCCGGCGG GACGACCACNGCGACGGCAACGGCGGCGGCGGCAGAGAANCCCTCNTCATCCCCAAGATGGACAGCCATAACTCAGCACNTCCCCAGATTGCTGAAGTNAGAATNGACATCTCATCATCTACTTCTGTAGCAGCTGGGAACAAAGTTTGCAGAGGTGCTGCTTGTGACTTTTCTGATTCCAGTAATAGCTCAAAAGATGCAAGGGAGAGAATGGCGTCAATGAGGAAGCTCATTATTGCTGTGATNCTTTGCATCATATTCATGGCGGTCGAANTGGTTt ]
[+] EMBL AY266290 [ GCCATAACTCAGCACCTCCCCAGATTGCTGAAGTGAGAATGGACATCTCATCATCTACTTCTGTAGCAGCTGGGAACAAAGTTTGCAGAGGTGCTGCTTGTGACTTTTCTGATTCCAGTAATAGCTCAAAAGATGCAAGGGAGAGAATGGCGTCACTGAGGAAGCTCATTATTGCTGTGATCCTTTGCATCATATTCATGGCGGTCGAAGTGGTTGGAGGTATCAAAGCAAACAG TTTGGCAATCTTGACTGATGCAGCCCATCTCCTTTCGGATGTTGCGGCCTTTGCCATATCTTTGTTCTCTCTTTGGGCAGCTGGATGGGAAGCTACACCACAGCAGTCATATGGGTTTTTCCGTATAGAAATTCTTGGTGCCCTGGTTTCTATTCAGCTCATATGGCTCCTTGCTGGTATTCTTGTCTATGAAGCTATTGTAAGGCTCATTAATGAAAGTGGTGAGGTCCAGGGCTCCCTCATGTTTGCTGTCTCAGCATTCGGCTTATTTGTTAACATCATAATGGCTGTCTTGCTTGGTCATGACCATGGACATGGACACGGACATGGTCATGGGCATGGACATTCCCATGACCATGATCATGGTGGTTCCGACCATGACCATCACCACCATGAAGATCAAGAGCATGGCCATGTACATCACCACGAAGATGGCCATGGTAATTCAATTACCGTCAATCTCCATCACCATCCAGGCACTGGACACCACCACCATGATGCTGAGGAACCATTGCTCAAGAGTGATGCTGGTTGTGACAGCACCCAATCTGGTGCCAAGGATGCCAAGAAGGCTCGTCGTAATATCAGTATACACAGTGCTTATCTGCATGTGCTTGGGGATTCAATCCAGAGCATCGGTGTGATGATTGGAGGGGCTATCATCTGGTACAAGCCCGAGTGGAAGATTATTGATCTCATCTGCACCCTCATCTTCTCCGTGATCGTACTCTTCACCACAATCAAGATGCTGCGCAACATCCTTGAGGTCCTGATGGAGAGCACGCCCCGCGAGATCGATGCCACCAGCCTTGAGAATGGCCTCCGCGACATGGACGGTGTGGTTGCAGTACATGAGCTGCACATCTGGGCCATAACGGTGGGGAAGGTTCTCCTGGCGTGCCATGTGACAATCACTCAGGACGCAGACGCTGATCAAATGCTGGACAAGGTGATTGGGTACATCAAGTCTGAGTACAACATCAGCCATGT GACCATTCAGATTGAGCGCGAGTAGG CTTGACCGCTTGAGACAGGTAGGTAGTGTTGATGACAGAACGGATCATCTTCATCTCATCTCATGGGACCAACTTATCAGGAACCTGTTTCACTGGTTTTATGCAGTTACTGTTAGCTCTGCAGTGCAAA TCA GATCAGCAGAGTCCAACAATTCCTGCA GGTTCATCTGAATGTTAGCTTCTGATGCTGTTTATTACTATAAGTACGTGTTATTAGTACTATC TTAGTCA ATTAGGTGAGTTGATGTTAA T CAGTTTCGTAGTCGGTTGTATTCACATGGGTGCAGTTTTCAGACAAGTTTTCAGGCACCTGTGAGTACGTCAACCTGCCTTCTGCGTCTGTAGTCTAGCGCCCAGCCG TACTAGTTT TTATGTAAATCTGCACTGGCATGGGAAATAATAACCAAGTTTCGTT ]
[+] EMBL CB658660 [ GGAACCTCATTATTGCTGAGATCCTTTGCATCATATTCATGGCGGTCCAAGTGGTTGGAGGTATCAAAGCAAACAGATTTGGCAATCTTGACTGATGCAGCCCATCTCCTTTCGGATGTTGCGGCCTTTGCCATATCTTTGTTCTCTCTTTGGGCAGCTGGATGGGAAGCTACACCACAGCAGTCATATGGGTTTTTCCGTATAGAAATTCTTGGTGCCCTGGTTTCTATTCAACTCATATGGCTCCTTGCTGGTATTCTTGTCTATGAAGCTATTGTAAGGCTCATTAATGAAAGTGGTGAGGTCCAAGGCTCCCTCATGTTTGCTGTCTCAGCATTTGGCTTATTTGATAACATCATAATGGCTGTCTTGCTTGGTCATGACCATGGACATGGACACAGACATGGTCATGGGCATGGACATTCCCATGACCATGATCATGGTGGTTCTGACCATGACCATCACCACCATGAATATCAACAGCATGGCCATGTACATCACCACGAACATGGCCATGGTAATTCAATTACCGTCAATCTCCATCACCATCCAGGCACTGGACACCACCACCATGATGCTGAAGAACCATTGCTCAATACTGATGCTGGTTGTGACAGCACCCAATCTGGTGCCAATGATGCCAAGAATGCTCGACGTAATATCAATGTACACAGTGCTTATCTACATGTGCTTGGGGATTCAATCCGGAGCATCTGAGAGATGATTGCATGGGCTATCA ]
[-] EMBL CB658661 [ GAGCATCGGTGTGATGATTGGAGGGGCTATCATCTGGTACAAGCCCGAGTGGAAGATTATTGATCTCATCTGCACCCTCATCTTCTCCGTGATCGTACTCTTCACCACAATCAAGATGCTGCGCAACATCCTTGAGGTCCTGATGGAGAGCACGCCCCGCGAGATCGATGCCACCAGCCTTGAGAATGGCCTCCGCGACATGGACGGTGTGGTTGCAGTACATGAGCTGCACATCTGGGCCATAACGGTGGGGAAGGTTCTCCTGGCGTGCCATGTGACAATCACTCAGGACGCAGACGCTGATCAAATGCTGGACAAGGTGATTGGGTACATCAAGTCTGAGTACAACATCAGCCATGT GACCATTCAGATTGAGCGCGAGTAGG CTTGACCGCTTGAGACAGGTAGGTAGTGTTGATGATAGAACGGATCATCTTCATCTCATCTCATGGGACCAACTTATCAGGAACCTGTTTCACTGGTTTTATGCAGTTACTGTTAGCTCTGCAGTGCAAA TCA GATCAGCAGAGTCCAACAATTCCTGCA GGTTCATCTGAATGTTAGCTTCTGGTGCTGTTTATTACTATAAGTACGTGTTATTAGTACTATC TTAGTCA ATTAGGTGAGTTGATGTTAA T CAGTTTCGTAGTCGGTTGTATTCACATGGGTGCAGTTTTCAGACAAGTTTTCAGGCACCTGTGAGTACGTCAACCTGCCTTCTGCGTCTGTAGTCTAGCGCCCAGCCG TACTAGTTT TTATGTAAATCTGCACTGGCAGGGGAAATAATAACCAAGTTTCGTTTGGCCTTA ]
[-] EMBL CB643999 [ TTGATCTCATCTGCACCCTCATCTTCTCCGTGATCGTACTCTTCACCACAATCAAGATGCTGCGCAACATCCTTGAGGTCCTGATGGAGAGCACGCCCCGCGAGATCGATGCCACCAGCCTTGAGAATGGCCTCCGCGACATGGACGGTGTGGTTGCAGTACATGAGCTGCACATCTGGGCCATAACGGTGGGGAAGGTTCTCCTGGCGTGCCATGTGACAATCACTCAGGACGCAGACGCTGATCAAATGCTGGACAAGGTGATTGGGTACATCAAGTCTGAGTACAACATCAGCCATGT GACCATTCAGATTGAGCGCGAGTAGG CTTGACCGCTTGAGACAGGTAGGTAGTGTTGATGATAGAACGGATCATCTTCATCTCATCTCATGGGACCAACTTATCAGGAACCTGTTTCACTGGTTTTATGCAGTTACTGTTAGCTCTGCAGTGCAAA TCA GATCAGCAGAGTCCAACAATTCCTGCA GGTTCATCTGAATGTTAGCTTCTGATGCTGTTTATTACTATAAGTACGTGTTATTAGTACTATC TTAGTCA ATTAGGTGAGTTGATGTTAA T CAGTTTCGTAGTCGGTTGTATTCACATGGGTGCAGTTTTCAGACAAGTTTTCAGGCACCTGTGAGTACGTCAACCTGCCTTCTGCGTCTGTAGTCTAGCGCCCAGCCG TACTAGTTT TTATGTAAATCTGCACTGGCATGGGAAATAATAACCAAGTTTCGTTTGGCCTTAAAAAAAAAAAAAA]
[+] EMBL AU097415 [ GAGACCACGCCCCGCGAGATCGATGCCACCAGCCTTGAGAATGGCCTCCGCGACATGGACGGTGTGGTTGCAGTACATGAGCTGCACATCTGGGCCATAACGGTGGGGAAGGTTCTCCTGGCGTGCCATGTGACAATCACTCAGGACGCAGACGCTGATCAAATGCTGGACAAGGTGATTGGGTACATCAAGTCTGAGTACAACATCAGCCATGT GACCATTCAGATTGAGCGCGAGTAGG CTTGACCGCTTGAGACAGGTAGGTAGTGTTGATGATAGAACGGATCATCTTCATCTCATCTCATGGGACCAACTTATCAGGAACCTGTTTCACTGGTTTTATGCAGTTACTGTTAGCTCTGCAGTGCAAA TCA GATCAGCAGAGTCCAACAATTCCTGCA GGTTCATCTGAATGTTAGCTTCTGATGCTGTTTATTACTATAAGTACGTGTTATTAGTACTATC TTAGTCA ATTAGGTGAGTTGATGTTAA T CAGTTTCGTAGTCGGTTGTATTCACATGGGTGCAGTTTTCAGACAAGTTTTCAGGCACCTGTGAGTACGTCAACCTGCCTTCTGCGTCTGTAGTCTAGCGCCCAGCCG TACTAGTTT TTATGTAAATCTGCACTGGCATGGGAAATAATAACCAAGTTTCGTTTGGCCTTATAAAAAAA ]
[-] EMBL CF297376 [ GACAAGGTGATTGGGTACATCAAGTCTGAGTACAACATCAGCCATGT ACCATTCAGATTGAGCGCGAGTAGG CTTGACCGCTTGAGACAGGTAGGTAGTGTTGATGATAGAACGGATCATCTTCATCTCATCTCATGGGACCAACTTATCAGGAACCTGTTTCACTGGTTTTATGCAGTTACTGTTAGCTCTGCAGTGCAAA TCA GATCAGCAGAGTCCAACAATTCCTGCA GGTTCATCTGAATGTTAGCTTCTGATGCTGTTTATTACTATAAGTACGTGTTATTAGTACTATC TTAGTCA ATTAGGTGAGTTGATGTTAA T CAGTTTCGTAGTCGGTTGTATTCACGTGGGTGCAGTTTTCAGACAAGTTTTCAGGCACCTGTGAGTACGTCAACCTGCCTTCTGCGTCTGTAGTCTAGCGCCCAGCCG TACTAGTTT TTATGTAAATCTGCACTGGCATGGGAAATAATAACCAAGTTTCGTTTGGCCTTAAAAAAA ]
[+] EMBL AU030725 [ cGATTGGGTACATCAAGTCTGAGTACAACATCAGCCATGT GACCATTCAGATTGAGCGCGAGTAGG CTTGACCGCTTGAGACAGGTAGGTAGTGTTGATGATAGAACGGATCATCTTCATCTCATCTCATGGGACCAACTTATCAGGAACCTGTTTCACTGGTTTTATGCAGTTACTGTTAGCTCTGCAGTGCAAA TCA GATCAGCAGAGTCCAACAATTCCTGCA GGTTCATCTGAATGTTAGCTTCTGATGCTGTTTATTACTATAAGTACGTGTTATTAGTACTATC TTAGTCA ATTAGGTGAGTTGATGTTAA T CAGTTTCGTAGTCGGTTGTATTCACATGGGTGCAGTTTTCAGACAAGTTTTCAGGCACCTGTGAGTACGTCAACCTGCCTTCTGCGTCTGTAGTCTAGCGCCCAGCCG TACTAGTTT TTATGTAAATCTGCACTGGCATGGGAAATAATAACCAAGTTTCGTTTGGCCTTAAAAAAAA ]
[+] EMBL BI809084 [ GTACATCAAGTCTGAGGACAACATCAGCCATGT GACCATTCAGATTGAGCGCGAGTAGG CTTGACCGCTTGAGACAGGTAGGTAGTGTTGATGATAGAACGGATCATCTTCATCTCATCTCATGGGACCAACTTATCAGGAACCTGTTTCACTGGTTTTA CCAGTTACTGTTAGCTCTGCAGTGCAAA TCA GATCAGCAGAGTCCAACAATTCCTGCA GGTTCATCTGAATGTTAGCTTCTGATGCTGTTTATTACTATAAGTACGTGTTATTAGTACTATC TTAGTCA ATTAGGTGAGTTGATGTTAACT CAGTTTCGTAGTCGGTTGTATTCACATGGGTGCAGTTTTCAGACAAGTTTTCAGGCACCTGTGAGTACGTCAACCTGCCTTCTGCGTCTGTAGTCTAGCGCCCAGCCG TACTAGTTT TTATGTAAATCTGCACTGGCATGGGAAATAATAACGAAGTTTCGTTTGGCCTTTATAAAAAAAA ]
[-] EMBL BU672916 [ GTACATCAAGTCTGAGTACAACATCAGCCATGTCGACCATTCAGATTGAGCGCGAGTAGGTCTTGCCCGCTTGAGACAGGTAGGTACTGTTGATGATAGAACGGATCATCGTCATCTCATCTCATGGGACCAACTTATCAGGTACCTGTTTCACGGGTTTTAAGCCGTTCCTGTTAGCTCTGCAGTGCAAACTCACGATCAGCAGAGTCCAACAATTCCTGCACGGTTCATCTGAATGTTAGCTTCTGATGCTGTTTCTTACTATAAGTACGTGTTACTAGTACGATCGTTAGTCATATTAGGTGAGTTGATGTTAA TACACTTTCGTAGTCGGTTGTATTCACATGGGTGCAGTTTTCAGACAAGTTTTCAGGCACCTGTGAGTACGTCAACCTGCCTTGTGCGTCTGTAGTCTAGCGCCCAGCCGCTAGTAGTTTATTATGTAAATCTGCACTGGCATGGGAAATAATAACGAAGTTTCGTTTGCCATTATAAA ]
consensusID : consensus_13796#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 262 fasta sequence
[GTGCATCAGAAGAATAGCAGCTGATGACTGCTGATTATCAACTATAAGTACGTGATTAATAGTACTATCATACTCAATTAGGTGAGTAGATGTTAACCAGTTTCGATAGTCGGTGGAATTAACCATGGGTGCAGTTTTCAGACAAGTTTTCAGGCACCTGTGAGTACGTCAACCTGCCTTCTGCGTCTGTAGTCTAGCGCCCAGCCGTACTAGTTTTTATGTAAATCTGCACTGGCATGGGAAATAATAACGAAGTTTCGTT]
[-] EMBL BU672995 [GTGCATCAGAAGAATAGCAGCTGATGACTGCTGATTATCAACTATAAGTACGTGATTAATAGTACTATCATACTCAATTAGGTGAGTAGATGTTAACCAGTTTCGATAGTCGGTGGAATTAACCATGGGTGCAGTTTTCAGACAAGTTTTCAGGCACCTGTGAGTACGTCAACCTGCCTTCTGCGTCTGTAGTCTAGCGCCCAGCCGTACTAGTTTTTATGTAAATCTGCACTGGCATGGGAAATAATAACGAAGTTTCGTT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_13796#0 CCCCCGTTCTCTCCTCCCCATCTCCAACGCACGCACGCGCCATCACCACCACCTCGACGC 60
consensus_13796#1 ------------------------------------------------------------
consensus_13796#0 CGGCGGCGACGACCACGGCGACGGCAACGGCGGCGGCGGCAGAGAAGCCCTCCTCATCCC 120
consensus_13796#1 ------------------------------------------------------------
consensus_13796#0 CAAGATGGACAGCCATAACTCAGCACCTCCCCAGATTGCTGAAGTGAGAATGGACATCTC 180
consensus_13796#1 ------------------------------------------------------------
consensus_13796#0 ATCATCTACTTCTGTAGCAGCTGGGAACAAAGTTTGCAGAGGTGCTGCTTGTGACTTTTC 240
consensus_13796#1 ------------------------------------------------------------
consensus_13796#0 TGATTCCAGTAATAGCTCAAAAGATGCAAGGGAGAGAATGGCGTCAATGAGGAAGCTCAT 300
consensus_13796#1 ------------------------------------------------------------
consensus_13796#0 TATTGCTGTGATCCTTTGCATCATATTCATGGCGGTCGAAGTGGTTGGAGGTATCAAAGC 360
consensus_13796#1 ------------------------------------------------------------
consensus_13796#0 AAACAGTTTGGCAATCTTGACTGATGCAGCCCATCTCCTTTCGGATGTTGCGGCCTTTGC 420
consensus_13796#1 ------------------------------------------------------------
consensus_13796#0 CATATCTTTGTTCTCTCTTTGGGCAGCTGGATGGGAAGCTACACCACAGCAGTCATATGG 480
consensus_13796#1 ------------------------------------------------------------
consensus_13796#0 GTTTTTCCGTATAGAAATTCTTGGTGCCCTGGTTTCTATTCAGCTCATATGGCTCCTTGC 540
consensus_13796#1 ------------------------------------------------------------
consensus_13796#0 TGGTATTCTTGTCTATGAAGCTATTGTAAGGCTCATTAATGAAAGTGGTGAGGTCCAGGG 600
consensus_13796#1 ------------------------------------------------------------
consensus_13796#0 CTCCCTCATGTTTGCTGTCTCAGCATTTGGCTTATTTGTTAACATCATAATGGCTGTCTT 660
consensus_13796#1 ------------------------------------------------------------
consensus_13796#0 GCTTGGTCATGACCATGGACATGGACACGGACATGGTCATGGGCATGGACATTCCCATGA 720
consensus_13796#1 ------------------------------------------------------------
consensus_13796#0 CCATGATCATGGTGGTTCTGACCATGACCATCACCACCATGAAGATCAAGAGCATGGCCA 780
consensus_13796#1 ------------------------------------------------------------
consensus_13796#0 TGTACATCACCACGAAGATGGCCATGGTAATTCAATTACCGTCAATCTCCATCACCATCC 840
consensus_13796#1 ------------------------------------------------------------
consensus_13796#0 AGGCACTGGACACCACCACCATGATGCTGAGGAACCATTGCTCAAGAGTGATGCTGGTTG 900
consensus_13796#1 ------------------------------------------------------------
consensus_13796#0 TGACAGCACCCAATCTGGTGCCAAGGATGCCAAGAAGGCTCGTCGTAATATCAATGTACA 960
consensus_13796#1 ------------------------------------------------------------
consensus_13796#0 CAGTGCTTATCTGCATGTGCTTGGGGATTCAATCCAGAGCATCGGTGTGATGATTGGAGG 1020
consensus_13796#1 ------------------------------------------------------------
consensus_13796#0 GGCTATCATCTGGTACAAGCCCGAGTGGAAGATTATTGATCTCATCTGCACCCTCATCTT 1080
consensus_13796#1 ------------------------------------------------------------
consensus_13796#0 CTCCGTGATCGTACTCTTCACCACAATCAAGATGCTGCGCAACATCCTTGAGGTCCTGAT 1140
consensus_13796#1 ------------------------------------------------------------
consensus_13796#0 GGAGAGCACGCCCCGCGAGATCGATGCCACCAGCCTTGAGAATGGCCTCCGCGACATGGA 1200
consensus_13796#1 ------------------------------------------------------------
consensus_13796#0 CGGTGTGGTTGCAGTACATGAGCTGCACATCTGGGCCATAACGGTGGGGAAGGTTCTCCT 1260
consensus_13796#1 ------------------------------------------------------------
consensus_13796#0 GGCGTGCCATGTGACAATCACTCAGGACGCAGACGCTGATCAAATGCTGGACAAGGTGAT 1320
consensus_13796#1 ------------------------------------------------------------
consensus_13796#0 TGGGTACATCAAGTCTGAGTACAACATCAGCCATGTGACCATTCAGATTGAGCGCGAGTA 1380
consensus_13796#1 ------------------------------------------------------------
consensus_13796#0 GGCTTGACCGCTTGAGACAGGTAGGTAGTGTTGATGATAGAACGGATCATCTTCATCTCA 1440
consensus_13796#1 ------------------------------------------------------------
consensus_13796#0 TCTCATGGGACCAACTTATCAGGAACCTGTTTCACTGGTTTTATGCAGTTACTGTTAGCT 1500
consensus_13796#1 ------------------------------------------------------------
consensus_13796#0 CTGCAGTGCAAATCAGATCAGCAGAGTCCAACAATTCCTGCAGGTTCATCTGAATGTTAG 1560
consensus_13796#1 -------------------------------------------GTGCATCAGAAGAATAG 17
** **** *** ***
consensus_13796#0 CTTCTGATG-CTGTTTATTA----CTATAAGTACGTG-TTATTAGTACTATCTTAGTCAA 1614
consensus_13796#1 CAGCTGATGACTGCTGATTATCAACTATAAGTACGTGATTAATAGTACTATCATACTCAA 77
* ****** *** * **** ************* *** ********** ** ****
consensus_13796#0 TTAGGTGAGTTGATGTTAATCAGTTTCG-TAGTCGGTTGTATTCAC-ATGGGTGCAGTTT 1672
consensus_13796#1 TTAGGTGAGTAGATGTTAACCAGTTTCGATAGTCGGTGGAATTAACCATGGGTGCAGTTT 137
********** ******** ******** ******** * *** ** *************
consensus_13796#0 TCAGACAAGTTTTCAGGCACCTGTGAGTACGTCAACCTGCCTTCTGCGTCTGTAGTCTAG 1732
consensus_13796#1 TCAGACAAGTTTTCAGGCACCTGTGAGTACGTCAACCTGCCTTCTGCGTCTGTAGTCTAG 197
************************************************************
consensus_13796#0 CGCCCAGCCGTACTAGTTTTTATGTAAATCTGCACTGGCATGGGAAATAATAACCAAGTT 1792
consensus_13796#1 CGCCCAGCCGTACTAGTTTTTATGTAAATCTGCACTGGCATGGGAAATAATAACGAAGTT 257
****************************************************** *****
consensus_13796#0 TCGTTTGGCCTTAAAAAAAAAAAAAA 1818
consensus_13796#1 TCGTT--------------------- 262
*****
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||