Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 1380 cluster # 1380       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1380#0 length = 438 sequences # 2  

consensusID : consensus_1380#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 438
fasta sequence
                              [GCTGTACTACCTCATCACTGTNGAGGGAGGTGGGGCTACAGAGCAGGTCATTGATCTTTTGCCATTGTCAAAACAAGTTAAGGATCGATGCGTCGAGGTCATCGACCATGCCATTAGTAGTGTCTTGTTAGCCACTGCCAAGATTGCCATTTTCCAGGGATGCCTGANATGGCTGTTGTTCAAGCTCTTCAAGGTGCATTTTGTGTACACATCAACTGTGTNTGCAATCATCAGTNCACTTCTGCCAATACTCCCCACCATGGTTGTCCTCGATATTTGCCGCNGACAACTGCCCCATGGAANGGAGATATGTGCTCGCTATTGTGGTGACAGTGGTTCATCTCATAATCATGGATTATGGAACTACAGTCATTCAGGAGGGATATACCCGGGGTACAATGGGATATCTCACTGGGCCTTAGCATAATTGGTGGGCAT]

[+] EMBL C73558               [GCTGTACTACCTCATCACTGTNGAGGGAGGTGGGGCTACAGAGCAGGTCATTGATCTTTTGCCATTGTCAAAACAAGTTAAGGATCGATGCGTCGAGGTCATCGACCATGCCATTAGTAGTGTCTTGTTAGCCACTGCCAAGATTGCCATTTTCCAGGGATGCCTGANATGGCTGTTGTTCAAGCTCTTCAAGGTGCATTTTGTGTACACATCAACTGTGTNTGCAATCATCAGTNCACTTCTGCCAATACTCCCCACCATGGTTGTCCTCGATATTTGCCGCNGACAACTGCCCCATGGAAN                                                                                                                                       ]
[+] EMBL OSS3118A             [                                                                                                  TCATCGACCATGCCATTAGTAGTGTCTTGTTAGCCACTGCCAAGATTGCCATTTTCCAGGGATGCCTGACATGGCTGTTGTTCAAGCTCTTCAAGGTGCATTTTGTGTACACATCAACTGTGTTTGCAATCATCAGTGCACTTCTGCCAATACT CCCACCATGGTTGTCCTCGATATTTGCCGCAGACAGCTG CTCATGGAAGGGAGATATGTGCTCGCTATTGTGGTGACAGTGGTTCATCTCATAATCATGGATTATGGAACTACAGTCATTCAGGAGGGATATACCCGGGGTACAATGGGATATCTCACTGGGCCTTAGCATAATTGGTGGGCAT]


>consensus_1380#0 GCTGTACTACCTCATCACTGTNGAGGGAGGTGGGGCTACAGAGCAGGTCATTGATCTTTT GCCATTGTCAAAACAAGTTAAGGATCGATGCGTCGAGGTCATCGACCATGCCATTAGTAG TGTCTTGTTAGCCACTGCCAAGATTGCCATTTTCCAGGGATGCCTGANATGGCTGTTGTT CAAGCTCTTCAAGGTGCATTTTGTGTACACATCAACTGTGTNTGCAATCATCAGTNCACT TCTGCCAATACTCCCCACCATGGTTGTCCTCGATATTTGCCGCNGACAACTGCCCCATGG AANGGAGATATGTGCTCGCTATTGTGGTGACAGTGGTTCATCTCATAATCATGGATTATG GAACTACAGTCATTCAGGAGGGATATACCCGGGGTACAATGGGATATCTCACTGGGCCTT AGCATAATTGGTGGGCAT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)