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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13835#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 2863 fasta sequence
[CCCTCGATTCCCATTTGATCCCACACCTCCACCAACTAGCTGCCACGCTCGCTTTCCCCTGCGACATGCGTGATGTGTGGGCGCTCCACTTGTTAACCATCTCGCGCGCACGCCAGGCTCGGCTCCTCGATCGACGCCATGTCGCTGCGCCGGCTCTGCTTCGTGCTGCCCATGGACGCCGACGAGGTGGTGGTGGTAGCTGGCGCTGCTGGTGAGGAGCAGCCTCGACGACGAGGGATGGCAGCGAGCGGGAGGCTGGCGTCGTACGTCCGCCGCAAGGTCGGCCGCGCGCTGCGGTGCGGGCTCTGCGGCGCCTGGTGCCACCACCGCTCGTCGGGAGTCTGCAGCTTCGAGGACATCGCCGGCGTGGACGCGGTCGGCGCGGGGAAGCTCGGCGGAGGCGCGGGCGGGAGCCCCAGGATCTTCAGCTACTCGGAGCTCTACATCGGGACCAGTGGGTTCAGCGACACGGAGATCCTGGGCAGCGGAGGGTTCGGGCGGGTGTACCGCGCCGTGCTGCCGAGCGACGGCACGACGGTGGCCGTCAAGTGCGTCGCCGGCCGCGGCGACCGGTTCGAGAAGTCCTTCCTGGCGGAGCTGGCGGCGGTGGCGCGGCTGCGGCACCGCAACCTCGTCCGCCTCCGCGGGTGGTGCGTGCAGGACGAGGAGGAGCTGCTGCTGGTGTACGACTACATGCCGAACCGCAGCCTCGACCGCCTCCTCTTCAGACCGGCGGCGGCGGCGGCGCCCGCCGCGTCGGCTCCGGCGCTGAGCTGGGACCGGCGACGCCGCATCGTCTCCGGCCTTGCCGCTGCCCTGTTCTACCTGCACGAGCAGCTCGACACGCAGATCATACACCGGGACGTGAAGACCAGCAACGTCATGCTGGACTCCGAGTACAACGCCCGGCTCGGCGACTTCGGCCTCGCCCGGTGGCTCGAGCACGCCATGTCCGGCGAGGACGCGCCGCCGCCGCAGCTGGAGGTGTCCCCGTCGCCTCATTCCGCGCGGTCGTCGTCGTTTGCTTCCGCGAATTACCAGTTCCGGCTGATGGACACCAGCCGGATAGGCGGCACCATCGGGTACCTTCCGCCGGAGAGCTTCCAGCGCCGGGCCATGGCAACCGCCAAGTCCGACGTGTTCAGCTTCGGGATCGTCCTCCTGGAGGTGGCCACAGGGCGGCGAGCGGTCGACCTCGCGTACCCCGACGACCAAATCTTCATGCTGGATTGGGTGC-GTCGGTTGTCC-GATGAGGGGAAGCTGCTCGAC-GC-CGGCGACC-GCAAGCTGCC-GGAC-GGC-AGCTAC-CC-GCTGTTC-GACATGGGCCGTCTCATACACCTCGGTCTCCTCTGCTCGCTGCACGATCCTAGGTCTCGTCCCAGCATGAAGTGGGTGGTGGAGAACCTCTCCGGCAGCTGCTC-CGGCGACCTGCCACC-GCTTCCGTCCTTCCTAGCTCTCCCA-AAGTACGTCTCTCTCACTTCCCCCTCC-GATTCCGGCACGACGACGAACGCCACGGACAGCACGGTCAC-CTCTGCGTCGAAGCTCTACGGCACGGCGGCCGGGACGACCATTTACCTCACCGCGGAGAACGGCCACCGCTCCAGAGGTGGCTTGGCTGACAACAGCGGCGGCAGCAGCCAGCGATCGACGCGGCCGCTGGTGGTGATCCCCAGCGTCGACACTCCCCGTGAGATATCGTACAAGGAGATCGTCGCGATCACCAACAACTTCTCCGAGTCGCAGATGGTGGCGGAGCTCGACTTCGGGACAGGGTACGAGGGCTTCTTGGACAACGGCTATGGCGGCAATGGCGCCCGCCGCGACCGCGTCCATGTCCTCGTGAAGCGGTTCGGCATGAAGACGTGCCCGGCGCTGCGCGTCCGGTTCGCCAACGAGCTCCGCAACCTCGCGAAGCTGCAGCACCGGAACCTCGTCCAGCTGCGCGGCTGGTGCACGGAGCACGGCGAGATGCTCGTCGTCTACGACTACTCCCCGGGGAACCTCCTGAGCCACCACCTCCTCCGGCGCGATGGCGCAGGCGCCGCCGCCGTCCTCCCGTGGCGCCACCGGTACAGCATCGTCAAGGCCCTCGCGTCCGCAGTCCTGTACCTGCACGAGGAGTGGGACGAGCAGGTCATCCACCGCAACATCACGTCGGCGGCGGTGTTCCTGGACCCCGACCGTAACCCGCGGCTCGGGAGCTTCGCGCTGGCCGAGTTCCTGTCAAGGAACGAGAGCCACGGCGGCGCGGGCGGGCACCACGTTGCCCTGCCCGCCACCAGCTCTGCTGCGCGGGGCATCTTCGGCTACATGTCGCCGGAGTACATGGAGACCGGCGAGGCCACCACCATGGCCGACGTCTACAGCTTCGGCGTGGTGGTGCTGGAGGTGGTGACCGGCGAGATGGCGGTGGACGTGAGGTCGCCGGAGGTCCTTCTTGTCAGGAGAGCGCAGCGGTGGAAGGAGCAGAGCCGCCCCGTCGAGGCCATCGTGGAC-AGACGGCTGGACGGCCAGG-TTGATCGCCCGGAGCTCGAGCGGTTGGTGAGGCTCGGCATGGCGTGCACCCAGTCTGACCCGGCGGCGCGACCGACGATGAGGAAGATAGTGAGCATCATGGATGGCAATGACGAGATCTTGAAGAAATTCGAGCAGAGGAAGCAGCAGAGCAAGGAAGAGTGGGAGACCACAAATGCTGCTGCTCTGTCCTTAGTAAGAAGACTCCATGCTCTTGCGATACACTGAACACAACGTCAATATGTATATATTTTCTCTAATAGAGAAATAAATTCTGTTATTATAGTTGGACACGATATTTTTATATATATTTATTAATTTCGTTCTTCAAAACCGAAAAAAANAAAAAAAAAAA]
[+] EMBL AK073557 [CCCTCGATTCCCATTTGATCCCACACCTCCACCAACTAGCTGCCACGCTCGCTTTCCCCTGCGACATGCGTGATGTGTGGGCGCTCCACTTGTTAACCATCTCGCGCGCACGCCAGGCTCGGCTCCTCGATCGACGCCATGTCGCTGCGCCGGCTCTGCTTCGTGCTGCCCATGGACGCCGACGAGGTGGTGGTGGTAGCTGGCGCTGCTGGTGAGGAGCAGCCTCGACGACGAGGGATGGCAGCGAGCGGGAGGCTGGCGTCGTACGTCCGCCGCAAGGTCGGCCGCGCGCTGCGGTGCGGGCTCTGCGGCGCCTGGTGCCACCACCGCTCGTCGGGAGTCTGCAGCTTCGAGGACATCGCCGGCGTGGACGCGGTCGGCGCGGGGAAGCTCGGCGGAGGCGCGGGCGGGAGCCCCAGGATCTTCAGCTACTCGGAGCTCTACATCGGGACCAGTGGGTTCAGCGACACGGAGATCCTGGGCAGCGGAGGGTTCGGGCGGGTGTACCGCGCCGTGCTGCCGAGCGACGGCACGACGGTGGCCGTCAAGTGCGTCGCCGGCCGCGGCGACCGGTTCGAGAAGTCCTTCCTGGCGGAGCTGGCGGCGGTGGCGCGGCTGCGGCACCGCAACCTCGTCCGCCTCCGCGGGTGGTGCGTGCAGGACGAGGAGGAGCTGCTGCTGGTGTACGACTACATGCCGAACCGCAGCCTCGACCGCCTCCTCTTCAGACCGGCGGCGGCGGCGGCGCCCGCCGCGTCGGCTCCGGCGCTGAGCTGGGACCGGCGACGCCGCATCGTCTCCGGCCTTGCCGCTGCCCTGTTCTACCTGCACGAGCAGCTCGACACGCAGATCATACACCGGGACGTGAAGACCAGCAACGTCATGCTGGACTCCGAGTACAACGCCCGGCTCGGCGACTTCGGCCTCGCCCGGTGGCTCGAGCACGCCATGTCCGGCGAGGACGCGCCGCCGCCGCAGCTGGAGGTGTCCCCGTCGCCTCATTCCGCGCGGTCGTCGTCGTTTGCTTCCGCGAATTACCAGTTCCGGCTGATGGACACCAGCCGGATAGGCGGCACCATCGGGTACCTTCCGCCGGAGAGCTTCCAGCGCCGGGCCATGGCAACCGCCAAGTCCGACGTGTTCAGCTTCGGGATCGTCCTCCTGGAGGTGGCCACAGGGCGGCGAGCGGTCGACCTCGCGTACCCCGACGACCAAATCTTCATGCTGGATTGGGTGC GTCGGTTGTCC GATGAGGGGAAGCTGCTCGAC GC CGGCGACC GCAAGCTGCC GGAC GGC AGCTAC CC GCTGTTC GACATGGGCCGTCTCATACACCTCGGTCTCCTCTGCTCGCTGCACGATCCTAGGTCTCGTCCCAGCATGAAGTGGGTGGTGGAGAACCTCTCCGGCAGCTGCTC CGGCGACCTGCCACC GCTTCCGTCCTTCCTAGCTCTCCCA AAGTACGTCTCTCTCACTTCCCCCTCC GATTCCGGCACGACGACGAACGCCACGGACAGCACGGTCAC CTCTGCGTCGAAGCTCTACGGCACGGCGGCCGGGACGACCATTTACCTCACCGCGGAGAACGGCCACCGCTCCAGAGGTGGCTTGGCTGACAACAGCGGCGGCAGCAGCCAGCGATCGACGCGGCCGCTGGTGGTGATCCCCAGCGTCGACACTCCCCGTGAGATATCGTACAAGGAGATCGTCGCGATCACCAACAACTTCTCCGAGTCGCAGATGGTGGCGGAGCTCGACTTCGGGACAGGGTACGAGGGCTTCTTGGACAACGGCTATGGCGGCAATGGCGCCCGCCGCGACCGCGTCCATGTCCTCGTGAAGCGGTTCGGCATGAAGACGTGCCCGGCGCTGCGCGTCCGGTTCGCCAACGAGCTCCGCAACCTCGCGAAGCTGCAGCACCGGAACCTCGTCCAGCTGCGCGGCTGGTGCACGGAGCACGGCGAGATGCTCGTCGTCTACGACTACTCCCCGGGGAACCTCCTGAGCCACCACCTCCTCCGGCGCGATGGCGCAGGCGCCGCCGCCGTCCTCCCGTGGCGCCACCGGTACAGCATCGTCAAGGCCCTCGCGTCCGCAGTCCTGTACCTGCACGAGGAGTGGGACGAGCAGGTCATCCACCGCAACATCACGTCGGCGGCGGTGTTCCTGGACCCCGACCGTAACCCGCGGCTCGGGAGCTTCGCGCTGGCCGAGTTCCTGTCAAGGAACGAGAGCCACGGCGGCGCGGGCGGGCACCACGTTGCCCTGCCCGCCACCAGCTCTGCTGCGCGGGGCATCTTCGGCTACATGTCGCCGGAGTACATGGAGACCGGCGAGGCCACCACCATGGCCGACGTCTACAGCTTCGGCGTGGTGGTGCTGGAGGTGGTGACCGGCGAGATGGCGGTGGACGTGAGGTCGCCGGAGGTCCTTCTTGTCAGGAGAGCGCAGCGGTGGAAGGAGCAGAGCCGCCCCGTCGAGGCCATCGTGGAC AGACGGCTGGACGGCCAGG TTGATCGCCCGGAGCTCGAGCGGTTGGTGAGGCTCGGCATGGCGTGCACCCAGTCTGACCCGGCGGCGCGACCGACGATGAGGAAGATAGTGAGCATCATGGATGGCAATGACGAGATCTTGAAGAAATTCGAGCAGAGGAAGCAGCAGAGCAAGGAAGAGTGGGAGACCACAAATGCTGCTGCTCTGTCCTTAGTAAGAAGACTCCATGCTCTTGCGATACACTGAACACAACGTCAATATGTATATATTTTCTCTAATAGAGAAATAAATTCTGTTATTATAGTTGGACACGATATTTTTATATATATTTATTAAT ]
[+] EMBL OSS12095A [ CTAGCTGCCACGCTCGCTTTCCCCTGCGACATGCGTGATGTGTGGGCGCTCCACTTGTTAACCATCTCGCGCGCACGNCAGGCTCGGCTCCTCGATCGACGCCATGTCGCTGCGACGGCTCTGCTTCGTGCTGCCCATGGACGCCGACGAGGTGGTGGTGGTAGCTGGCGCTGCTGGTGAGGAGCAGNCTCGACGACGAGGGATGGCAGCGAGCGNGAGGCTGNCGTCGTACGTCCGCCGCA ]
[+] EMBL CB630559 [ GCGGCACCGCAACCTCGTCCGCCTCCGCGGGTGGTGCGTGCAGGACGAGGAGGAGCTGCTGCTGGTGTACGACTACATGCCGAACCGCAGCCTCGACCGCCTCCTCTTCAGACCGGCGGCGGCGGCGGCGCCCGCCGCGTCGGCTCCGGCGCTGAGCTGGGACCGGCGACGCCGCATCGTCTCCGGCCTTGCCGCTGCCCTGTTCTACCTGCACGAGCAGCTCGACACGCAGATCATACACCGGGACGTGAAGACCAGCAACGTCATGCTGGACTCCGAGTACAACGCCCGGGTCGGCGACTTCGGCCTCGCCCGGTGGCTCGAGCACGCCATGTCCGGGGAGGACGCGCCGCCGCCGCAGCTGGAGGTGTCCCCGTCGCCTCGTTCCGCGCGGACGTCGTCATTTGCTTCCGCGAATTACCAGTTCCGGCTGATGGACACCAGCCGGATATGCGGAACCATCGGGTACCTTCCGCCGGAGAGCTTCCAGCGCCGGGCCATGGCAACCGCCAAGTCATACGTGTTCAACTTCAGGATCGTCCTCCTGGAGGTGGCCACAGGGCGGCGAGCGGTCGACCTCTCGTACCCCGACGACCAAATCTTCATGCTGGATTGGGTGC GTCGGTTGTCC GATGAGGGGAAGCTGCTCGAC GC CGGCGACC GCAAGCTGCC GGAC GGC AGCTAC CC GCTGTTC GACATGGGCCGTCTCATACACCTCGGACTCCTCTGCTCGCT ]
[+] EMBL CB630557 [ GCGGCACCTCAACCTCGTCCGCCTCCGCGGGTGGTGCGTGCAGGACGAGGAGGAGCTGCTGCTGGTGTACGACTACATGCCGAACCGCAGCCTCGACCGCCTCCTCTTCAGACCGGCGGCGGCGGCGGCGCCCGCCGCGTCGGCTCCGGCGCTGAGCTGGGACCGGCGACGCCGCATCGTCTCCGGCCTTGCCGCTGCCCTGTTCTACCTGCACGAGCAGCTCGACACGCAGATCATACACCGGGACGTGAAGACCAGCAACGTCATGCTGGACTCCGAGTACAACGCCCGGCTCGGCGACTTCGGCCTCGCCCGGTGGCTCGAGCACGCCATGTCCGGCGAGGACGCGCCGCCGCCGCAGCTGGAGGTGTCCCCGTCGCCTCGTTCCGCGCGGTCGTCGTCATTTGCTTCCGCGAATTACCAGTTCCGGCTGATGGACACCAGCCGGATATGCGGCACCATCGGGTACCTTCCGCCGGAGAGCTTCCAGCGCCGGGCCATGGCAACCGCCAAGTCCGACGTGTTCAGCTTCAGGATCGTCCTCCTGGAGGTGGCCACAGGGCGGCGAGCGGTCGACCTCGCGTACCCCGACGACCAAATCTTCATGCTGGATTGGGTGC GTCGGTTGTCC GATGAGGGGAAGCTGCTCGAC GC CGGCGACC GCTAGCTGCC GGAC GGC AGCTAC CC GCTGTTC a ]
[+] EMBL CB636408 [ GCTCCGGCGCTGAGCTGGGACCGGCGACGCCGCATCGTCTCCGGCCTTGCCGCTGCCCTGTTCTACCTGCACGAGCAGCTCGACACGCAGATCATACACCGGGACGTGAAGACCAGCAACGTCATGCTGGACTCCGAGTACAACGCCCGGCTCGGCGACTTCGGCCTCGCCCGGTGGCTCGAGCACGCCATGTCCGGCGAGGACGCGCCGCCGCCGCAGCTGGAGGTGTCCCCGTCGCCTCATTCCGCGCGGTCGTCGTCGTTTGCTTCCGCGAATTACCAGTTCCGGCTGATGGACACCAGCCGGATAGGCGGCACCATCGGGTACCTTCCGCCGGAGAGCTTCCAGCGCCGGGCCATGGCAACCGCCAAGTCCGACGTGTTCAGCTTCGGGATCGTCCTCCTGGAGGTGGCCACAGGGCGGCGAGCGGTCGACCTCGCGTTCCCCGACGACCAAATCTTCATGCTGGATTGG ]
[+] EMBL BI808901 [ CTTCATGCTGGATTGGTTGCAGTCAGTTGTCCAGATGAGGGGAAGCTGCTCGACAGCACGGCGACCAGCAAGCTGCCAGGACAGGCAAGCTACACCAGCTGTTCAGACATGGGCCGTCTCATACACCTCGGTCTCCTCTGCTCGCTGCACGATCCTAGGTCTCGTCCCAGCATGAAGTGGGTGGTGGAGAACCTCTCCGGCAGCTGCTCACGGCGACCTGCCACCAGCTTCCGTCCTTCCTAGCTCTCCCACAAGTACGTCTCTCTCACTTCCCCCTCCAGATTCCGGCACGACGACGAACGCCACGGACAGCACGGTCACACT TGCGTCGAAGCT TACGGCACGGCGGCCGGGACGACCATTTACCTCACCGCGGAGAACGGCCACCGCTCCAGAGGTGGCTTGGCTGACAACAGCGGC GCAGCAGCCAGCGATCGAC ]
[+] EMBL CB653995 [ CCGTCCTTCCTAGCTCTCCCA AAGTACGTCTCTCTCACTTCCCCCTCC GATTCCGGCACGACGACGAACGCCACGGACAGCACGGTCAC CTCTGCGTCGAAGCTCTACGGCACGGCGGCCGGGACGACCATTTACCTCACCGCGGAGAACGGCCACCGCTCCAGAGGTGGCTTGGCTGACAACAGCGGCGGCAGCAGCCAGCGATCGACGCGGCCGCTGGTGGTGATCCCCAGCGTCGACACTCCCCGTGAGATATCGTACAAGGAGATCGTCGCGATCACCAACAACTTCTCCGAGTCGCAGATGGTGGCGGAGCTCGACTTCGGGACAGGGTACGAGGGCTTCTTGGACAACGGCTATGGCGGCAATGGCGCCCGCCGCGACCGCGTCCATGTCCTCGTGAAGCGGTTCGGCATGAAGACGTGCCCGGCGCTGCGCGTCCGGTTCGCCAACGAGCTCCGCAACCTCGCGAAGCTGCAGCACCGGAACCTCGTCCAGCTGCGCGGCTGGTGCCCGGAGCACGGCGAGATGCTCGTCGTCTACGACTACTCCCCGGGGAACCTCCTGAGCCACCACCTCCTCCGGCGCGATGGCGCAGGCGCCGCCGCCGTCCCTCCGTGGCGCCACCG ]
[+] EMBL BI810564 [ CCACGGACAGCACGGTCAC CTCTGCGTCGAAGCTCTACGGCACGGCGGCCGGGACGACCATTTACCTCACCGCGGAGAACGGCCACCGCTCCAGAGGTGGCTTGGCTGACAACAGCGGCGGCAGCAGCCA ]
[-] EMBL CB653996 [ CGGTACAGCATCGTCAAGGCCCTCGCGTCCGCAGTCCTGTACCTGCACGAGGAGTGGGACGAGCAGGTCATCCACCGCAACATCACGTCGGCGGCGGTGTTCCTGGACCCCGACCGTAACCCGCGGCTCGGGAGCTTCGCGCTGGCCGAGTTCCTGTCAAGGAACGAGAGCCACGGCGGCGCGGGCGGGCACCACGTTGCCCTGCCCGCCACCAGCTCTGCTGCGCGGGGCATCTTCGGCTACATGTCGCCGGAGTACATGGAGACCGGCGAGGCCACCACCATGGCCGACGTCTACAGCTTCGGCGTGGTGGTGCTGGAGGTGGTGACCGGCGAGATGGCGGTGGACGTGAGGTCGCCGGAGGTCCTTCTTGTCAGGAGAGCGCAGCGGTGGAAGGAGCAGAGCCGCCCCGTCGAGGCCATCGTGGAC AGACGGCTGGACGGCCAGG TTGATCGCCCGGAGCTCGAGCGGTTGGTGAGGCTCGGCATGGCGTGCACCCAGTCTGACCCGGCGGCGCGACCGACGATGAGGAAGATAGTGAGCATCATGGATGGCAATGACGAGATCTTGAAGAAATTCGAGCAGAGGAAGCAGCAGAGCAAGGAAGAGTGGGAGACCACAAATGCTGCTGCTCTGTCCTTAGTAAAAAGACTCCATGCTCTTGCGATACACTGAACACAACGTCAATAT AAGGTATTTTCTCTAATAGAGAAA ]
[-] EMBL CB630560 [ CCACCGCAACATCACGTCGGCGGCGGTGTTCCTGGACCCCGACCGTAACCCGCGGCTCGGGAGCTTCGCGCTGGCCGAGTTCCTGTCAAGGAACGAGAGCCACGGCGGCGCGGGCGGGCACCACGTTGCCCTGCCCGCCACCAGCTCTGCTGCGCGGGGCATCTTCGGCTACATGTCGCCGGAGTACATGGAGACCGGCGAGGCCACCGCCATGGCCGACGTCTACAGCTTCGGCGTGGTGGTGCTGGAGGTGGTGACCGGCGAGATGGCGGTGGACGTGAGGTCGCCGGAGGTCCTTCTTGTCAGGAGAGCGCAGCGGTGGAAGGAGCAGAGCCGCCCCGTCGAGGCCATCGTGGAC AGACGGCTGGACGGCCAGG TTGATCGCCCGGAGCTCGAGCGGTTGGTGAGGCTCGGCATGGCGTGCACCCAGTCTGACCCGGCGGCGCGACCGACGATGAGGAAGATAGTGAGCATCATGGATGGCAATGACGAGATCTTGAAGAAATTCGAGCAGAGGAAGCAGCAGAGCAAGGAAGAGTGGGAGACCAGAAATGCTGCTGCTCTGTCCTTAGTAAGAAGACTCCATGCTCTTGGGATACACTGAACACAACGTCAATATGTATATATTTTCTCTAATAGAGAAATAAATTCTGTTATTATAGTTGGACGGGATATTTTTATATATATTTATTAATTTCGTTC ]
[-] EMBL CB630558 [ AGAGCCACGGCGGCGCGGGCGGGCACCACGTTGCCCTGCCCGCCACCAGCTCTGCTGCGCGGGGCATCTTCGGCTACATGTCGCCGGAGTACATGGAGACCGGCGAGGCCACCGCCATGGCCGACGTCTACAGCTTCGGCGTGGTGGTGCTGGAGGTGGTGACCGGCGAGATGGCGGTGGACGTGAGGTCGCCGGAGGTCCTTCTTGTCAGGAGAGCGCAGCGGTGGAAGGAGCAGAGCCGCCCCGTCGAGGCCATCGTGGAC AGACGGCTGGACGGCCAGG TTGATCGCCCGGAGCTCGAGCGGTTGGTGAGGCTCGGCATGGCGTGCACCCAGTCTGACCCGGCGGCGCGACCGACGATGAGGAAGATAGTGAGCATCATGGATGGCAATGACGAGATCTTGAAGAAATTCGAGCAGAGGAAGCAGCAGAGCAAGGAAGAGTGGGAGACCAGAAATGCTGCTGCTCTGTCCTTAGTAAGAAGACTCCATGCTCTTGCGATACACTGAACACAACGTCAATATGTATATATTTTCTCTAATAGAGAAATAAATTCTGTTATTATAGTTGGGCACGATATTTTTATATATATTTATTAATTTCGTT ]
[-] EMBL CB636409 [ TGGTGGTGCTGAAGGTGGTGACCGGCGAGATGGCGGTGGACGTGAGGTCGCCGGAGGTCCTTCTTGTCAGGAGAGCGCAGCGGTGGAAGGAGCAGAGCCGCCCCGTCGAGGCCATCGTGGAC AGACGGCTGGACGGCCAGG TTGATCGCCCGGAGCTCGAGCGGTTGGTGAGGCTCGGCATGGCGTGCACCCAGTCTGACCCGGCGGCGCGACCGACGATGAGGAAGATAGTGAGCATCATGGATGGCAATGACGAGATCTTGAAGAAATTCGAGCAGAGGAAGCAGCAGAGCAAGGAAGAGTGGGAGACCACAAATGCTGCTGCTCTGTCCTTAGTAAGAAGACTCCATGCTCTTGCGATACACTGAACACAACGTCAATATGTATATATTTTCTCTAATAGAGAAATAAATTCTGTTATTATAGTTGGACACGATATTTTTATATATATTTATTAATT ]
[+] EMBL C99141 [ GGCCATCGTGGACAAAACGGCTGGACGGCCAGGTTTGATCGCCCGGAGCTCGAGCGGTTGGTAAGGCTCGGCATGGCGTGCACCCAGTCTGACCCGGCGGCGCGACCGACGATGAGGAAGATAGTGAGCATCATGGATGGCAATGACGAGATCTTGAAGAAATTCGAGCAGAGGAAGCAGCAGAGCAAGGAAGAGTGGGAGNCCACAAATGCTGCTGCTCTGTCCTTAGTAAGAAGACTCCATGCTCTTGCGATACACTGAACACAACGTCAATATGTATATATTTTCTCTAATAGAGAAATAAATTCTGTTATTATAGTTGGACACGATATTTTTATATATATTTATTAATTTCGTTCTTCAAAACCGAAAAAAANAAAAAAAAAAA]
consensusID : consensus_13835#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 499 fasta sequence
[TCGGCCTGGTGGTTCTGGAGGTGTTGNACCGGCGAGATGCGGTGGACGTGAGTCGCCGGAGGTCCTTCTTGTCAGGAGAGCCCNCGATGGAAGGACAGACCGCCCCGTCGAGGCCCATCGTGGACAGACGGCTGGACGGCCAGGTTGNTCTGCCCGGAGCTCGAGCGGTTGGTGAGGCTCGGCATGGCGTGCGACCCCGTCTTGAGCCCGGCGGCGGCGGTACCGACGATGAGGTAAGATNGTGAGCATCATGGATGGCACATGACGAGATTCTTGATAGAAATTCGAGCAGAGGAAGCAGCAGAGCAAGGAAGAGTGGGAGACCACCACAATGCTGCTGCTCTGTCCTTAGTATAGAAGACTCCCANGCTCTTGCGATACCACTGAACCACAACGTCAATATGTATATATTTTNTCTAATAGAGAAATAAATTNTGTTATTATAGTTGGACNCGANATTTTTATATATATTTATTAATTTCGTTTTTCAAAAAAAAAA]
[+] EMBL BM419205 [TCGGCCTGGTGGTTCTGGAGGTGTTGNACCGGCGAGATGCGGTGGACGTGAGTCGCCGGAGGTCCTTCTTGTCAGGAGAGCCCNCGATGGAAGGACAGACCGCCCCGTCGAGGCCCATCGTGGACAGACGGCTGGACGGCCAGGTTGNTCTGCCCGGAGCTCGAGCGGTTGGTGAGGCTCGGCATGGCGTGCGACCCCGTCTTGAGCCCGGCGGCGGCGGTACCGACGATGAGGTAAGATNGTGAGCATCATGGATGGCACATGACGAGATTCTTGATAGAAATTCGAGCAGAGGAAGCAGCAGAGCAAGGAAGAGTGGGAGACCACCACAATGCTGCTGCTCTGTCCTTAGTATAGAAGACTCCCANGCTCTTGCGATACCACTGAACCACAACGTCAATATGTATATATTTTNTCTAATAGAGAAATAAATTNTGTTATTATAGTTGGACNCGANATTTTTATATATATTTATTAATTTCGTTTTTCAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_13835#0 CCCTCGATTCCCATTTGATCCCACACCTCCACCAACTAGCTGCCACGCTCGCTTTCCCCT 60
consensus_13835#1 ------------------------------------------------------------
consensus_13835#0 GCGACATGCGTGATGTGTGGGCGCTCCACTTGTTAACCATCTCGCGCGCACGCCAGGCTC 120
consensus_13835#1 ------------------------------------------------------------
consensus_13835#0 GGCTCCTCGATCGACGCCATGTCGCTGCGCCGGCTCTGCTTCGTGCTGCCCATGGACGCC 180
consensus_13835#1 ------------------------------------------------------------
consensus_13835#0 GACGAGGTGGTGGTGGTAGCTGGCGCTGCTGGTGAGGAGCAGCCTCGACGACGAGGGATG 240
consensus_13835#1 ------------------------------------------------------------
consensus_13835#0 GCAGCGAGCGGGAGGCTGGCGTCGTACGTCCGCCGCAAGGTCGGCCGCGCGCTGCGGTGC 300
consensus_13835#1 ------------------------------------------------------------
consensus_13835#0 GGGCTCTGCGGCGCCTGGTGCCACCACCGCTCGTCGGGAGTCTGCAGCTTCGAGGACATC 360
consensus_13835#1 ------------------------------------------------------------
consensus_13835#0 GCCGGCGTGGACGCGGTCGGCGCGGGGAAGCTCGGCGGAGGCGCGGGCGGGAGCCCCAGG 420
consensus_13835#1 ------------------------------------------------------------
consensus_13835#0 ATCTTCAGCTACTCGGAGCTCTACATCGGGACCAGTGGGTTCAGCGACACGGAGATCCTG 480
consensus_13835#1 ------------------------------------------------------------
consensus_13835#0 GGCAGCGGAGGGTTCGGGCGGGTGTACCGCGCCGTGCTGCCGAGCGACGGCACGACGGTG 540
consensus_13835#1 ------------------------------------------------------------
consensus_13835#0 GCCGTCAAGTGCGTCGCCGGCCGCGGCGACCGGTTCGAGAAGTCCTTCCTGGCGGAGCTG 600
consensus_13835#1 ------------------------------------------------------------
consensus_13835#0 GCGGCGGTGGCGCGGCTGCGGCACCGCAACCTCGTCCGCCTCCGCGGGTGGTGCGTGCAG 660
consensus_13835#1 ------------------------------------------------------------
consensus_13835#0 GACGAGGAGGAGCTGCTGCTGGTGTACGACTACATGCCGAACCGCAGCCTCGACCGCCTC 720
consensus_13835#1 ------------------------------------------------------------
consensus_13835#0 CTCTTCAGACCGGCGGCGGCGGCGGCGCCCGCCGCGTCGGCTCCGGCGCTGAGCTGGGAC 780
consensus_13835#1 ------------------------------------------------------------
consensus_13835#0 CGGCGACGCCGCATCGTCTCCGGCCTTGCCGCTGCCCTGTTCTACCTGCACGAGCAGCTC 840
consensus_13835#1 ------------------------------------------------------------
consensus_13835#0 GACACGCAGATCATACACCGGGACGTGAAGACCAGCAACGTCATGCTGGACTCCGAGTAC 900
consensus_13835#1 ------------------------------------------------------------
consensus_13835#0 AACGCCCGGCTCGGCGACTTCGGCCTCGCCCGGTGGCTCGAGCACGCCATGTCCGGCGAG 960
consensus_13835#1 ------------------------------------------------------------
consensus_13835#0 GACGCGCCGCCGCCGCAGCTGGAGGTGTCCCCGTCGCCTCATTCCGCGCGGTCGTCGTCG 1020
consensus_13835#1 ------------------------------------------------------------
consensus_13835#0 TTTGCTTCCGCGAATTACCAGTTCCGGCTGATGGACACCAGCCGGATAGGCGGCACCATC 1080
consensus_13835#1 ------------------------------------------------------------
consensus_13835#0 GGGTACCTTCCGCCGGAGAGCTTCCAGCGCCGGGCCATGGCAACCGCCAAGTCCGACGTG 1140
consensus_13835#1 ------------------------------------------------------------
consensus_13835#0 TTCAGCTTCGGGATCGTCCTCCTGGAGGTGGCCACAGGGCGGCGAGCGGTCGACCTCGCG 1200
consensus_13835#1 ------------------------------------------------------------
consensus_13835#0 TACCCCGACGACCAAATCTTCATGCTGGATTGGGTGCGTCGGTTGTCCGATGAGGGGAAG 1260
consensus_13835#1 ------------------------------------------------------------
consensus_13835#0 CTGCTCGACGCCGGCGACCGCAAGCTGCCGGACGGCAGCTACCCGCTGTTCGACATGGGC 1320
consensus_13835#1 ------------------------------------------------------------
consensus_13835#0 CGTCTCATACACCTCGGTCTCCTCTGCTCGCTGCACGATCCTAGGTCTCGTCCCAGCATG 1380
consensus_13835#1 ------------------------------------------------------------
consensus_13835#0 AAGTGGGTGGTGGAGAACCTCTCCGGCAGCTGCTCCGGCGACCTGCCACCGCTTCCGTCC 1440
consensus_13835#1 ------------------------------------------------------------
consensus_13835#0 TTCCTAGCTCTCCCAAAGTACGTCTCTCTCACTTCCCCCTCCGATTCCGGCACGACGACG 1500
consensus_13835#1 ------------------------------------------------------------
consensus_13835#0 AACGCCACGGACAGCACGGTCACCTCTGCGTCGAAGCTCTACGGCACGGCGGCCGGGACG 1560
consensus_13835#1 ------------------------------------------------------------
consensus_13835#0 ACCATTTACCTCACCGCGGAGAACGGCCACCGCTCCAGAGGTGGCTTGGCTGACAACAGC 1620
consensus_13835#1 ------------------------------------------------------------
consensus_13835#0 GGCGGCAGCAGCCAGCGATCGACGCGGCCGCTGGTGGTGATCCCCAGCGTCGACACTCCC 1680
consensus_13835#1 ------------------------------------------------------------
consensus_13835#0 CGTGAGATATCGTACAAGGAGATCGTCGCGATCACCAACAACTTCTCCGAGTCGCAGATG 1740
consensus_13835#1 ------------------------------------------------------------
consensus_13835#0 GTGGCGGAGCTCGACTTCGGGACAGGGTACGAGGGCTTCTTGGACAACGGCTATGGCGGC 1800
consensus_13835#1 ------------------------------------------------------------
consensus_13835#0 AATGGCGCCCGCCGCGACCGCGTCCATGTCCTCGTGAAGCGGTTCGGCATGAAGACGTGC 1860
consensus_13835#1 ------------------------------------------------------------
consensus_13835#0 CCGGCGCTGCGCGTCCGGTTCGCCAACGAGCTCCGCAACCTCGCGAAGCTGCAGCACCGG 1920
consensus_13835#1 ------------------------------------------------------------
consensus_13835#0 AACCTCGTCCAGCTGCGCGGCTGGTGCACGGAGCACGGCGAGATGCTCGTCGTCTACGAC 1980
consensus_13835#1 ------------------------------------------------------------
consensus_13835#0 TACTCCCCGGGGAACCTCCTGAGCCACCACCTCCTCCGGCGCGATGGCGCAGGCGCCGCC 2040
consensus_13835#1 ------------------------------------------------------------
consensus_13835#0 GCCGTCCTCCCGTGGCGCCACCGGTACAGCATCGTCAAGGCCCTCGCGTCCGCAGTCCTG 2100
consensus_13835#1 ------------------------------------------------------------
consensus_13835#0 TACCTGCACGAGGAGTGGGACGAGCAGGTCATCCACCGCAACATCACGTCGGCGGCGGTG 2160
consensus_13835#1 ------------------------------------------------------------
consensus_13835#0 TTCCTGGACCCCGACCGTAACCCGCGGCTCGGGAGCTTCGCGCTGGCCGAGTTCCTGTCA 2220
consensus_13835#1 ------------------------------------------------------------
consensus_13835#0 AGGAACGAGAGCCACGGCGGCGCGGGCGGGCACCACGTTGCCCTGCCCGCCACCAGCTCT 2280
consensus_13835#1 ------------------------------------------------------------
consensus_13835#0 GCTGCGCGGGGCATCTTCGGCTACATGTCGCCGGAGTACATGGAGACCGGCGAGGCCACC 2340
consensus_13835#1 ------------------------------------------------------------
consensus_13835#0 ACCATGGCCGACGTCTACAGCTTCGGCGTGGTGGTGCTGGAGGTGGTGA-CCGGCGAGAT 2399
consensus_13835#1 ----------------------TCGGCCTGGTGGTTCTGGAGGTGTTGNACCGGCGAGAT 38
***** ******* ********* ** **********
consensus_13835#0 GGCGGTGGACGTGAGGTCGCCGGAGGTCCTTCTTGTCAGGAGAGCGCAGCGGTGGAAGGA 2459
consensus_13835#1 G-CGGTGGACGTGAG-TCGCCGGAGGTCCTTCTTGTCAGGAGAGC-CCNCGATGGAAGGA 95
* ************* ***************************** * ** ********
consensus_13835#0 GCAGAGCCGCCCCGTCGAGGCC-ATCGTGGACAGACGGCTGGACGGCCAGGTTGATC-GC 2517
consensus_13835#1 -CAGA-CCGCCCCGTCGAGGCCCATCGTGGACAGACGGCTGGACGGCCAGGTTGNTCTGC 153
**** **************** ******************************* ** **
consensus_13835#0 CCGGAGCTCGAGCGGTTGGTGAGGCTCGGCATGGCGTGC-ACCCAGTCT--GACCCGGCG 2574
consensus_13835#1 CCGGAGCTCGAGCGGTTGGTGAGGCTCGGCATGGCGTGCGACCCCGTCTTGAGCCCGGCG 213
*************************************** **** **** *******
consensus_13835#0 GCG-CG--ACCGACGATGAGG-AAGATAGTGAGCATCATGGATGGCA-ATGACGAGAT-C 2628
consensus_13835#1 GCGGCGGTACCGACGATGAGGTAAGATNGTGAGCATCATGGATGGCACATGACGAGATTC 273
*** ** ************* ***** ******************* ********** *
consensus_13835#0 TTGA-AGAAATTCGAGCAGAGGAAGCAGCAGAGCAAGGAAGAGTGGGAGACCACAA--AT 2685
consensus_13835#1 TTGATAGAAATTCGAGCAGAGGAAGCAGCAGAGCAAGGAAGAGTGGGAGACCACCACAAT 333
**** ************************************************* * **
consensus_13835#0 GCTGCTGCTCTGTCCTTAGTA-AGAAGACTCC-ATGCTCTTGCGATAC-ACTGAAC-ACA 2741
consensus_13835#1 GCTGCTGCTCTGTCCTTAGTATAGAAGACTCCCANGCTCTTGCGATACCACTGAACCACA 393
********************* ********** * ************* ******* ***
consensus_13835#0 ACGTCAATATGTATATATTTTCTCTAATAGAGAAATAAATTCTGTTATTATAGTTGGACA 2801
consensus_13835#1 ACGTCAATATGTATATATTTTNTCTAATAGAGAAATAAATTNTGTTATTATAGTTGGACN 453
********************* ******************* *****************
consensus_13835#0 CGATATTTTTATATATATTTATTAATTTCGTTCTTCAAAACCGAAAAAAANAAAAAAAAA 2861
consensus_13835#1 CGANATTTTTATATATATTTATTAATTTCGTTTTTCAAAAAAAAAA-------------- 499
*** **************************** ******* ***
consensus_13835#0 AA 2863
consensus_13835#1 --
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||