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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13836#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 14 consensus length = 1207 fasta sequence
[GAAGGAGTAGATCAGTCCTCGCCTCGGCTCGGCTCCCTCCCACGCTCCAGCTCCGCCTCCAATGGCGCCTATGGCCATCTCCACCCCGCTCGCCCTCCGCGCCTCCCCGACCCGCCTCCTCTCCCGCAGGCGGAGCGGAGCCAAATCAGGCGTGGCTCTCCCAGGTCCACAATTTGTACCACCTGGTATTTCTTCAAAGTTGGACGAGAGGATACATTGTCATTCTTCTCTGAGGAAAAATACAATTGTAGCATCAGAGAATGAAAATCCACCTTTAATGCCTGCCATAATGACTCCTGCTGGTGCTCTTGATCTGGCAACTGTATTGTTGGGGAACCGCATTATCTTCATTGGTCAATATATTAACTCGCAAGTAGCACAGCGTGTAATATCACAGCTTGTCACACTTGCTGCTGTTGATGAAGAGGCTGATATTCTGATCTACCTGAACTGCCCCGGC-GGAAGTCTCTACTCCATCTTAGCAATTTATGATTGCATGTCCTGGATCAAGCCCAAAGTTGGAACAGTGTGCTTT-GGT-GTTGTTGCTAGCCAGGCAGCAATTATACTTGCTGGCGGTGAGAAGGG-AATGCGTTATGCCATGCCAAATGCTAGAGTAATGATTCATCAACCTCAAGGTGTATCAGAGGGTAATGTGGAGGAGGTGAGGCGACAGGTTGGGGAAACCATTTATGCTCGTGATAAAGTTGATAAGATGTTTGCTGCTTTTACTGGGCAAACCTTGGATATGGTACAACAGTGGACAGAGAGGGATCGTTTCATGTCTTCATCTGAAGCCATGGACTTTGGACTAGTTGATGCCCTGCTGGAAACAAGATACTAACAAACAAACACTTAGGCACAGTTTGATTAGCAGAGGCTGGTACAAGGATTGTGAAACTGGAGCTGAAGTTGAGATTTTCGCCGTCCTTCTAGTTCAAGGACTCCAATGACAGGAGGCTGGATCTGCGAGACTTGAATGCATCGCCATCGCTCCTATGAGCAAAACATCTCTGCGTTGAGTGTGATTTTTTGCTCTTCTTTTTTGGATCTGGTTTTACATGCCGCCAGCCTATGGTCTCAATGCATTGGTCCTGCTAATGTTTAGTGTAGACCAGATGATCCTTTAGACAGCAAAACATCAGTTATTACTCCGTAGATTTTCCCATGAGCTGATTCCAGACTGTGTGCAACTTTTGTGTTCCAATTG]
[+] EMBL CF333845 [GAAGGAGTAGAAAAGTCCTCGCCTCGGCTCGGCTCCCTCCCACGCTCCAGCTCCGCCTCCAATGGCGCCTATGGCCATCTCCACCCCGCTCGCCCTCCGCGCCTCCCCGACCCGCCTCCTCTCCCGCAGGCGGAGCGGAGCCAAATCAGGCGTGGCTCTCCCAGGTCCACAATTTGTACCACCTGGTATTTCTTCAAAGTTGGACGAGAGGATACATTGTCATTCTTCTCTGAGGAAAAATACAATTGTAGCATCAGAGAATGAAAATCCACCTTTAATGCCTGCCATAATGACTCCTGCTGGTGCTCTTGATCTGGCAACTGTATTGTTGGGGAACCGCATTATCTTCATTGGTCAATATATTAACTCGCAAGTAGCACAGCGTGTAATATCACAGCTTGTCACACTTGCTGCTGTTGATGAAGAGGCTGATATTCTGATCTACCTGAACTGCCCCGGC GGAAGTCTCTACTCCATCTTAGCAATTTATGATTGCATGTCCTGGATCAAGCCCAAAGTTGGAACAGTGTGCTTT GGT GTTGTTGCTAGCCAGGCAGCAATTATACTTGCTGGCGGTGAGAAGGG AATGCGTTATGCCAT ]
[+] EMBL AK058696 [ tccTCAGTCCTCGCCTCGGCTCGGCTCCCTCCCACGCTCCAGCTCCGCCTCCAATGGCGCCTATGGCCATCTCCACCCCGCTCGCCCTCCGCGCCTCCCCGACCCGCCTCCTCTCCCGCAGGCGGAGCGGAGCCAAATCAGGCGTGGCTCTCCCAGGTCCACAATTTGTACCACCTGGTATTTCTTCAAAGTTGGACGAGAGGATACATTGTCATTCTTCTCTGAGGAAAAATACAATTGTAGCATCAGAGAATGAAAATCCACCTTTAATGCCTGCCATAATGACTCCTGCTGGTGCTCTTGATCTGGCAACTGTATTGTTGGGGAACCGCATTATCTTCATTGGTCAATATATTAACTCGCAAGTAGCACAGCGTGTAATATCACAGCTTGTCACACTTGCTGCTGTTGATGAAGAGGCTGATATTCTGATCTACCTGAACTGCCCCGGC GGAAGTCTCTACTCCATCTTAGCAATTTATGATTGCATGTCCTGGATCAAGCCCAAAGTTGGAACAGTGTGCTTT GGT GTTGTTGCTAGCCAGGCAGCAATTATACTTGCTGGCGGTGAGAAGGG AATGCGTTATGCCATGCCAAATGCTAGAGTAATGATTCATCAACCTCAAGGTGTATCAGAGGGTAATGTGGAGGAGGTGAGGCGACAGGTTGGGGAAACCATTTATGCTCGTGATAAAGTTGATAAGATGTTTGCTGCTTTTACTGGGCAAACCTTGGATATGGTACAACAGTGGACAGAGAGGGATCGTTTCATGTCTTCATCTGAAGCCATGGACTTTGGACTAGTTGATGCCCTGCTGGAAACAAGATACTAACAAACAAACACTTAGGCACAGTTTGATTAGCAGAGGCTGGTACAAGGATTGTGAAACTGGAGCTGAAGTTGAGATTTTCGCCGTCCTTCTAGTTCAAGGACTCCAATGACAGGAGGCTGGATCTGCGAGACTTGAATGCATCGCCATCGCTCCTATGAGCAAAACATCTCTGCGTTGAGTGTGATTTTTTGCTCTTCTTTTTTGGATCTGGTTTTACATGCCGCCAGCCTATGGTCTCAATGCATTGGTCCTGCTAATGTTTAGTGTAGACCAGATGATCCTTTAGACAGCAAAACATCAGTTATTACTCCGTAGATTTTCCCATGAGCTGATTCCAGACTGTGTGCAACTTTTGTGTTCCAATTG]
[+] EMBL CF338516 [ TCAGTCCTCGCCTCGGCTCGGCTCCCTCCCACGCTCCAGCTCCGCCTCCAATGGCGCCTATGGCCATCTCCACCCCGCTCGCCCTCCGCGCCTCCCCGACCCGCCTCCTCTCCCGCAGGCGGAGCGGAGCCAAATCAGGCGTGGCTCTCCCAGGTCCACAATTTGTACCACCTGGTATTTCTTCAAAGTTGGACGAGAGGATACATTGTCATTCTTCTCTGAGGAAAAATACAATTGTAGCATCAGAGAATGAAAATCCACCTTTAATGCCTGCCATAATGACTCCTGCTGGTGCTCTTGATCTGGCAACTGTATTGTTGGGGAACCGCATTATCTTCATTGGTCAATATATTAACTCGCAAGTAGCACAGCGTGTAATATCACAGCTTGTCACACTTGCTGCTGTTGATGAAGAGGCTGATATTCTGATCTACCTGAACTGCCCCGGC GGAAGTCTCTACTCCATCTTAGCAATTTATGATTGCATGTCCTGGATCAAGCCCAAAGTTG ]
[+] EMBL CF339487 [ TCAGTCCTCGCCTCGGCTCGGCTCCCTCCCACGCTCCAGCTCCGCCTCCAATGGCGCCTATGGCCATCTCCACCCCGCTCGCCCTCCGCGCCTCCCCGACCCGCCTCCTCTCCCGCAGGCGGAGCGGAGCCAAATCAGGCGTGGCTCTCCCAGGTCCACAATTTGTACCACCTGGTATTTCTTCAAAGTTGGACGAGAGGATACATTGTCATTCTTCTCTGAGGAAAAATACAATTGTAGCATCAGAGAATGAAAATCCACCTTTAATGCCTGCCATAATGACTCCTGCTGGTGCTCTTGATCTGGCAACTGTATTGTTGGGGAACCGCATTATCTTCATTGGTCAATATATTAACTCGCAAGTAGCACAGCGTGTAATATCACAGCTTGTCACACTTGCTGCTGTTGATGAAGAGGCTGATATTCTGATCTACCTGAACTGCCCCGGC GGAAGTCTCTACTCCATCTTAGCAATTTATGATTGCATGTCCTGGATCAAGCCCAAAGTTGGAACAGTGTGCTTT GGT GTTGTTGCTAGCCAGGCAGCAATTATACTTGCTGGCGGTGAGAAGGG AATGCGTTATGCCATGCCAAATGCTAGAGTAATGATTCATCAACCTC ]
[+] EMBL CF339998 [ TCAGTCCTCGCCTCGGCTCGGCTCCCTCCCACGCTCCAGCTCCGCCTCCAATGGCGCCTATGGCCATCTCCACCCCGCTCGCCCTCCGCGCCTCCCCGACCCGCCTCCTCTCCCGCAGGCGGAGCGGAGCCAAATCAGGCGTGGCTCTCCCAGGTCCACAATTTGTACCACCTGGTATTTCTTCAAAGTTGGACGAGAGGATACATTGTCATTCTTCTCTGAGGAAAAATACAATTGTAGCATCAGAGAATGAAAATCCACCTTTAATGCCTGCCATAATGACTCCTGCTGGTGCTCTTGATCTGGCAACTGTATTGTTGGGGAACCGCATTATCTTCATTGGTCAATATATTAACTCGCAAGTAGCACAGCGTGTAATATCACAGCTTGTCACACTTGCTGCTGTTGATGAAGAGGCTGATATTCTGATCTACCTGAACTGCCCCGGC GGAAGTCTCTACTCCATCTTAGCAATTTATGATTGCATGTCCTGGATCAAGCCCAAAGTTGGAACAGTGTGCTTTGGGT GTTGTTGCTAGCCAGGCAGCAATTATACTTGCTGGCGGTGAGAAGGGAAATGCG TATGCCATGCCAAATGCTAGAGTAATGATT ]
[+] EMBL CF339894 [ TCAGTCCTCGCCTCGGCTCGGCTCCCTCCCACGCTCCAGCTCCGCCTCCAATGGCGCCTATGGCCATCTCCACCCCGCTCGCCCTCCGCGCCTCCCCGACCCGCCTCCTCTCCCGCAGGCGGAGCGGAGCCAAATCAGGCGTGGCTCTCCCAGGTCCACAATTTGTACCACCTGGTATTTCTTCAAAGTTGGACGAGAGGATACATTGTCATTCTTCTCTGAGGAAAAATACAATTGTAGCATCAGAGAATGAAAATCCACCTTTAATGCCTGCCATAATGACTCCTGCTGGTGCTCTTGATCTGGCAACTGTATTGTTGGGGAACCGCATTATCTTCATTGGTCAATATATTAACTCGCAAGTAGCACAGCGTGTAATATCACAGCTTGTCACACTTGCTGCTGTTGATGAAGAGGCTGATATTCTGATCTACCTGAACTGCCCCGGC GGAAGTCTCTACTCCATCTTAGCAATTTATGATTGCATGTCCTGGATCAAGCCCAAAGTTGGAACAGTGTGCTTT GGTGGTTGTTGCTAGCCAGGCAGCAATTATACTTGCTGGCGGTGAGAAGGG AATGCGTTATGCCATGCCAAATGCTAGAGTAATGATT ]
[+] EMBL CF339944 [ TCAGTCCTCGCCTCGGCTCGGCTCCCTCCCACGCTCCAGCTCCGCCTCCAATGGCGCCTATGGCCATCTCCACCCCGCTCGCCCTCCGCGCCTCCCCGACCCGCCTCCTCTCCCGCAGGCGGAGCGGAGCCAAATCAGGCGTGGCTCTCCCAGGTCCACAATTTGTACCACCTGGTATTTCTTCAAAGTTGGACGAGAGGATACATTGTCATTCTTCTCTGAGGAAAAATACAATTGTAGCATCAGAGAATGAAAATCCACCTTTAATGCCTGCCATAATGACTCCTGCTGGTGCTCTTGATCTGGCAACTGTATTGTTGGGGAACCGCATTATCTTCATTGGTCAATATATTAACTCGCAAGTAGCACAGCGTGTAATATCACAGCTTGTCACACTTGCTGCTGTTGATGAAGAGGCTGATATTCTGATCTACCTGAACTGCCCCGGC GGAAGTCTCTACTCCATCTTAGCAATTTATGATTGCATGTCCTGGATCAAGCCCAAAGTTGGAACAGTGTGCTTTGGGT GTTGTTGCTAGCCAGGCAGCAATTATACTTGCTGGCGGTGAGAAGGG AATGCGTTATGCCATGCCAAATGCTAGAGTAATGATT ]
[+] EMBL CF339862 [ TCAGTCCTCGCCTCGGCTCGGCTCCCTCCCACGCTCCAGCTCCGCCTCCAATGGCGCCTATGGCCATCTCCACCCCGCTCGCCCTCCGCGCCTCCCCGACCCGCCTCCTCTCCCGCAGGCGGAGCGGAGCCAAATCAGGCGTGGCTCTCCCAGGTCCACAATTTGTACCACCTGGTATTTCTTCAAAGTTGGACGAGAGGATACATTGTCATTCTTCTCTGAGGAAAAATACAATTGTAGCATCAGAGAATGAAAATCCACCTTTAATGCCTGCCATAATGACTCCTGCTGGTGCTCTTGATCTGGCAACTGTATTGTTGGGGAACCGCATTATCTTCATTGGTCAATATATTAACTCGCAAGTAGCACAGCGTGTAATATCACAGCTTGTCACACTTGCTGCTGTTGATGAAGAGGCTGATATTCTGATCTACCTGAACTGCCCCGGC GGAAGTCTCTACTCCATCTTAGCAATTTATGATTGCATGTCCTGGATCAAGCCCAAAGTTGGAACAGTGTGCTTT GGT GTTGTTGCTAGCCAGGCAGCAATTATACTTGCTGGCGGTGAGAAGGG AATGCGTTATGCCATGCCAAATGCTAGAGTAATGATT ]
[+] EMBL CF338761 [ TCAGTCCTCGCCTCGGCTCGGCTCCCTCCCACGCTCCAGCTCCGCCTCCAATGGCGCCTATGGCCATCTCCACCCCGCTCGCCCTCCGCGCCTCCCCGACCCGCCTCCTCTCCCGCAGGCGGAGCGGAGCCAAATCAGGCGTGGCTCTCCCAGGTCCACAATTTGTACCACCTGGTATTTCTTCAAAGTTGGACGAGAGGATACATTGTCATTCTTCTCTGAGGAAAAATACAATTGTAGCATCAGAGAATGAAAATCCACCTTTAATGCCTGCCATAATGACTCCTGCTGGTGCTCTTGATCTGGCAACTGTATTGTTGGGGAACCGCATTATCTTCATTGGTCAATATATTAACTCGCAAGTAGCACAGCGTGTAATATCACAGCTTGTCACACTTGCTGCTGTTGATGAAGAGGCTGATATTCTGATCTACCTGAACTGCCCCGGC GGAAGTCTCTACTCCATCTTAGCAATTTATGATTGCATGTCCTGGATCAAGCCCAAAGTTGGAACAG ]
[+] EMBL CF339404 [ TCAGTCCTCGCCTCGGCTCGGCTCCCTCCCACGCTCCAGCTCCGCCTCCAATGGCGCCTATGGCCATCTCCACCCCGCTCGCCCTCCGCGCCTCCCCGACCCGCCTCCTCTCCCGCAGGCGGAGCGGAGCCAAATCAGGCGTGGCTCTCCCAGGTCCACAATTTGTACCACCTGGTATTTCTTCAAAGTTGGACGAGAGGATACATTGTCATTCTTCTCTGAGGAAAAATACAATTGTAGCATCAGAGAATGAAAATCCACCTTTAATGCCTGCCATAATGACTCCTGCTGGTGCTCTTGATCTGGCAACTGTATTGTTGGGGAACCGCATTATCTTCATTGGTCAATATATTAACTCGCAAGTAGCACAGCGTGTAATATCACAGCTTGTCACACTTGCTGCTGTTGATGAAGAGGCTGATATTCTGATCTACCTGAACTGCCCCGGCGGGAAGTCTCTACTCCATCTTAGCAATTTATGATTGCATGTCCTGGATCAAGCCCAAAGTTGGAAC ]
[+] EMBL CF338689 [ TCAGTCCTCGCCTCGGCTCGGCTCCCTCCCACGCTCCAGCTCCGCCTCCAATGGCGCCTATGGCCATCTCCACCCCGCTCGCCCTCCGCGCCTCCCCGACCCGCCTCCTCTCCCGCAGGCGGAGCGGAGCCAAATCAGGCGTGGCTCTCCCAGGTCCACAATTTGTACCACCTGGTATTTCTTCAAAGTTGGACGAGAGGATACATTGTCATTCTTCTCTGAGGAAAAATACAATTGTAGCATCAGAGAATGAAAATCCACCTTTAATGCCTGCCATAATGACTCCTGCTGGTGCTCTTGATCTGGCAACTGTATTGTTGGGGAACCGCATTATCTTCATTGGTCAATATATTAACTCGCAAGTAGCACAGCGTGTAATATCACAGCTTGTCACACTTGCTGCTGTTGATGAAGAGGCTGATATTCTGATCTACCTGAACTGCCCCGGC GGAAGTCTCTACTCCATCTTAGCAATTTATGATTGCATGTCCTGGATCAAGCCCAAAGTTGG ]
[+] EMBL CF338474 [ ttAGTCCTCGCCTCGGCTCGGCTCCCTCCCACGCTCCAGCTCCGCCTCCAATGGCGCCTATGGCCATCTCCACCCCGCTCGCCCTCCGCGCCTCCCCGACCCGCCTCCTCTCCCGCAGGCGGAGCGGAGCCAAATCAGGCGTGGCTCTCCCAGGTCCACAATTTGTACCACCTGGTATTTCTTCAAAGTTGGACGAGAGGATACATTGTCATTCTTCTCTGAGGAAAAATACAATTGTAGCA ]
[+] EMBL AK071057 [ GTCCTCGCCTCGGCTCGGCTCCCTCCCACGCTCCAGCTCCGCCTCCAATGGCGCCTATGGCCATCTCCACCCCGCTCGCCCTCCGCGCCTCCCCGACCCGCCTCCTCTCCCGCAGGCGGAGCGGAGCCAAATCAGGCGTGGCTCTCCCAGGTCCACAATTTGTACCACCTGGTATTTCTTCAAAGTTGGACGAGAGGATACATTGTCATTCTTCTCTGAGGAAAAATACAATTGTAGCATCAGAGAATGAAAATCCACCTTTAATGCCTGCCATAATGACTCCTGCTGGTGCTCTTGATCTGGCAACTGTATTGTTGGGGAACCGCATTATCTTCATTGGTCAATATATTAACTCGCAAGTAGCACAGCGTGTAATATCACAGCTTGTCACACTTGCTGCTGTTGATGAAGAGGCTGATATTCTGATCTACCTGAACTGCCCCGGC GGAAGTCTCTACTCCATCTTAGCAATTTATGATTGCATGTCCTGGATCAAGCCCAAAGTTGGAACAGTGTGCTTT GGT GTTGTTGCTAGCCAGGCAGCAATTATACTTGCTGGCGGTGAGAAGGG AATGCGTTATGCCATGCCAAATGCTAGAGTAATGATTCATCAACCTCAAGGTGTATCAGAGGGTAATGTGGAGGAGGTGAGGCGACAGGTTGGGGAAACCATTTATGCTCGTGATAAAGTTGATAAGATGTTTGCTGCTTTTACTGGGCAAACCTTGGATATGGTACAACAGTGGACAGAGAGGGATCGTTTCATGTCTTCATCTGAAGCCATGGACTTTGGACTAGTTGATGCCCTGCTGGAAACAAGATACTAACAAACAAACACTTAGGCACAGTTTGATTAGCAGAGGCTGGTACAAGGATTGTGAAACTGGAGCTGAAGTTGAGATTTTCGCCGTCCTTCTAGTTCAAGGACTCCAATGACAGGAGGCTGGATCTGCGAGACTTGAATGCATCGCCATCGCTCCTATGAGCAAAACATCTCTGCGTTGAGTGTGATTTTTTGCTCTTCTTTTTTGGATCTGGTTTTACATGCCGCCAGCCTATGGTCTCAATGCATTGGTCCTGCTAATGTTTAGTGTAGACCAGATGATCCTTTAGACAGCAAAACATCAGTTATTACTCCGTAGATTTTCCCATGAGCTGATTCCAGACTGTGTGCAACTTTTGTGTTCCAATTG]
[-] EMBL CF335571 [ AAAGTTGGAACAGTGTGCTTT GGT GTTGTTGCTAGCCAGGCAGCAATTATACTTGCTGGCGGTGAGAAGGG AATGCGTTATGCCATGCCAAATGCTAGAGTAATGATTCATCAACCTCAAGGTG ATCAGAGGGTAATGTGGAGGAGGTGAGGCGACAGGTTGGGGAAACCATTTATGCTCGTGATAAAGTTGATAAGATGTTTGCTGCTTTTACTGGGCAAACCTTGGATATGGTACAACAGTGGACAGAGAGGGATCGTTTCATGTCTCCATCTGAAGCCATGGACTTTGGACTAGTTGATGCCCTGCTGGAAACAAGATACTAACAAACAAACACTTAGGCACAGTTTGATTAGCAGAGGCTGGTACAAGGATTGTGAAACTGGAGCTGAAGTTGAGATTTTCGCCGTCCTTCTAGTTCAAGGACTCCAATGACAGGAGGCTGGATCTGCGAGACTTGAATGCATCGCCATCGCTCCTATGAGCAAAACATCTCTGCGTTGAGTGTGATTTTTTGCTCTTCTTTTTTGGATCTGGTTTTACATGCCGCCAGCCTATGGTCTCAATGCATTGGTCCTGCTAATGTTTAGTGTAGACCAGATGATCCTTTAGACAGCAAAACATCAGTTATTACTCCGTAGATTTTCCCATGAGCTGATTCaaaa ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||