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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13855#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 1641 fasta sequence
[TTTCTCCTTCACCATTCGCCTCCTCCTCCTCTCGAGGGAGAGAAGAAAAAAGCTAACGCCGCCGCAAGAATCCAAGAAGGAGAAGAGAGAGAATTTGATCTCTTCCTCTCCTTCCCCGAGGCTCTGAGGCGAGGTAGGTTGTCGCGGGATCAATAATGGTGGCCATCGAGGCGGCGGCGGCGGCGGCGGCGGCGGAGAGGGGCCCGATCCGGGCGGTGGCGGAGGCGGAGGCGGAGGCGGAGGCGAAGGTGGTGGATGTGGAGGGGAAGGAGGAGGAGGAGGAGGCGGCCAAGGTGGAGGAGGAGGAGGAGGAGGAGAGGGAGTACAAGAGCGACATGAGGAAGCTGGAGGAGCTCATGTCCAAGCTGAACCCGCGCGCGCAGGAGTTCGTGCCATCGTCGCGCCGCGCGCCGCCGGCGGCGGCGGCGCAG-GCGGCGG-GCGGGCTGTCCGCCGACGCGCCGGTGTTCGTCTCCGCCGCCGAGTACTTCGGCGGGGCCGGCGCCGGAGCCGGGCAGCTGCAGGTGGGCGGCGGCGGCGGG-AGGGACTCCAGCAGCGACGGA-TCCAGCAACGGCGGCGGGCAGCCGCAGAATCGCCGGAGAAGGAGTGGATTCAACCAGGGAAGGAGGAGGACGGGAGGCCGGACACGACGCGCCGATAGGGAGGATAGTGTGCGGAGGACCGTCTATGTCTCTGACATTGATCAGCAAGTGACTGAACAGAAGCTTGCCGAAGTG-TTTTCTAACTGTGGACAAGTGGTAGATTGCCGTATCTGTGGTGATCCACACTCAGTCTTGCGTTTTGCTTTCATTGAATTTGCTGATGATGCCGGTGCAAGGGCCGCACTAACACTAGGAGGAACCATGCTTGGTTACTACCCTGTTAGAGTTTTGCCTTCCAAAACAGCTATTCTGCCTGTGAATCCTAAATTTCTTCCTCGGACGGAAGATGAAAAAGAGAT-GGTCTCAAGGACTGTATATTGTACTAACATAGATAAGAAGGTTACAGAAGAAGATGTAAAGATTTT-CTTTCAGCAGCTTTGTGGGAAGGTTTCTCGGCTGAGGCTCCTTGGTGATTATGTGCACTCGAC-GTGCATTGCATTTGTTGAGTTTGCTCAAGCAGAAAGCGCCATTCTAGCCCTGAACTATAGTGGAATGGTTCTTGGCACACTTCCTATC-AGGGTGAGCCCTTCCAAGACACCCGT-GCGTCCGCGGTCGCCTCGCGTGATGTCAAACTGAGTCCGGGTTGTTCCTGAAGCTTGAGGCTGTCACCAATGGCAGGCAGAGCTTGAAACTCTAGTCATGGCGTTTAGAAATGCTGTCGCTTCGCGGAATCGGTAACTGCCGTTTCTGAGAGTATCATCTCATCATCTCTTAGGTCCAAGTAGAAGGCCGACCTGCTGATGTTCGTCTGTTCAGAGACCCATCTGTAGGTTGGGAGAGGCTACATTTTCGTTTCTTTTGTTCAGTATGCTATGTTCAGTATCCTATAACAGCCTTTGCAGGCAATTCCGACAATAATATCTACGTATTTTCTGTCTCATTCACACTGTTCATGTGAATATGTGATAGTTGAAATTCCATATCTGACGGTGAACTTAGGGTTTTATTTTTCATTACTAGTGAAATTGAAATGATTAATGTG]
[+] EMBL AK069852 [TTTCTCCTTCACCATTCGCCTCCTCCTCCTCTCGAGGGAGAGAAGAAAAAAGCTAACGCCGCCGCAAGAATCCAAGAAGGAGAAGAGAGAGAATTTGATCTCTTCCTCTCCTTCCCCGAGGCTCTGAGGCGAGGTAGGTTGTCGCGGGATCAATAATGGTGGCCATCGAGGCGGCGGCGGCGGCGGCGGCGGCGGAGAGGGGCCCGATCCGGGCGGTGGCGGAGGCGGAGGCGGAGGCGGAGGCGAAGGTGGTGGATGTGGAGGGGAAGGAGGAGGAGGAGGAGGCGGCCAAGGTGGAGGAGGAGGAGGAGGAGGAGAGGGAGTACAAGAGCGACATGAGGAAGCTGGAGGAGCTCATGTCCAAGCTGAACCCGCGCGCGCAGGAGTTCGTGCCATCGTCGCGCCGCGCGCCGCCGGCGGCGGCGGCGCAG GCGGCGG GCGGGCTGTCCGCCGACGCGCCGGTGTTCGTCTCCGCCGCCGAGTACTTCGGCGGGGCCGGCGCCGGAGCCGGGCAGCTGCAGGTGGGCGGCGGCGGCGGG AGGGACTCCAGCAGCGACGGA TCCAGCAACGGCGGCGGGCAGCCGCAGAATCGCCGGAGAAGGAGTGGATTCAACCAGGGAAGGAGGAGGACGGGAGGCCGGACACGACGCGCCGATAGGGAGGATAGTGTGCGGAGGACCGTCTATGTCTCTGACATTGATCAGCAAGTGACTGAACAGAAGCTTGCCGAAGTG TTTTCTAACTGTGGACAAGTGGTAGATTGCCGTATCTGTGGTGATCCACACTCAGTCTTGCGTTTTGCTTTCATTGAATTTGCTGATGATGCCGGTGCAAGGGCCGCACTAACACTAGGAGGAACCATGCTTGGTTACTACCCTGTTAGAGTTTTGCCTTCCAGAACAGCTATTCTGCCTGTGAATCCTAAATTTCTTCCTCGGACGGAAGATGAAAAAGAGAT GGTCTCAAGGACTGTATATTGTACTAACATAGATAAGAAGGTTACAGAAGAAGATGTAAAGATTTT CTTTCAGCAGCTTTGTGGGAAGGTTTCTCGGCTGAGGCTCCTTGGTGATTATGTGCACTCGAC GTGCATTGCATTTGTTGAGTTTGCTCAAGCAGAAAGCGCCATTCTAGCCCTGAACTATAGTGGAATGGTTCTTGGCACACTTCCTATC AGGGTGAGCCCTTCCAAGACACCCGT GCGTCCGCGGTCGCCTCGCGTGATGTCAAACTGAGTCCGGGTTGTTCCTGAAGCTTGAGGCTGTCACCAATGGCAGGCAGAGCTTGAAACTCTAGTCATGGCGTTTAGAAATGCTGTCGCTTCGCGGAATCGGTAACTGCCGTTTCTGAGAGTATCATCTCATCATCTCTTAGGTCCAAGTAGAAGGCCGACCTGCTGATGTTCGTCTGTTCAGAGACCCATCTGTAGGTTGGGAGAGGCTACATTTTCGTTTCTTTTGTTCAGTATGCTATGTTCAGTATCCTATAACAGCCTTTGCAGGCAATTCCGACAATAATATCTACGTATTTTCTGTCTCATTCACACTGTTCATGTGAATATGTGATAGTTGAAATTCCATATCTGACGGTGAACTTAGGGTTTTATTTTTCATTACTAGTGAAATTGAAATGATTAATGTG]
[+] EMBL CB676471 [ AAGGCCCCTTCAAGAATCCAAGAAGGAGAAGAGAGAGAATTTGATCTCTTCCTCTCCTTCCCCGAGGCTCTGAGGCGAGGCCGGTTGTCCCGGGATCAATAATGGTGGCCATCGAGGCGGCGGCGGCGGCGGCGGCGGCGGAGAGGGGCCCGATCCGGGCGGTGGCGGAGGCGGAGGCGGAGGCGGAGGCGAAGGTGGTGGATGTGGAGGGGAAGGAGGAGGAGGAAGAGGCGGCCAAGGTGGAGGACGAGGAGGAGGAGGAGAGGGACTACAAGAGCGACCTGAGGAAGCTGGAGGAGCTCATGTCC ]
[+] EMBL AU064534 [ GGAGAGGGAGTACAAGAGCGACATGAGGAAGCTGGAGGAGCTCATGTCCAAGCTGAACCCGCGCGCGCAGGAGTTCGTGCCATCGTCGCGCCGCGCGCCGCCGG NGCG GTCNAAGNGCGGCGGTGCGGGCTGTCCGCCGACGCGCCGGTGTTCGTCTCCGCCGCCGAGTACTTCGGCGGGGCCGGCGCCGGAGCCGGGCAGCTGCAGGTGGGCTGCGGCGGCGGGAAGGGACTCCAGCAGCGACGGATTCCAGCAACtg ]
[+] EMBL AU095099 [ cCCGGTGTTCGTCTCCGCCGCCGAGTACTTCGGCGAGGCCGGCGCCGGAGCCGGGCAGCTGCAGGTGGGCGGCGGCGGCGGG AGGGACTCCAGCAGCGACGGA TCCAGCAACGGCGGCGGGCAGC NAGAATCGCCGGAGAAGGAGTGGATTCAACCAGGGAAGGAGGAGGACGGGAGGCCGGACACGACGCGCCGATAGGGAGGATAGTGTGCGGAGGACCGTCTATGTCTCTGACATTGATCAGCAAGTGACTGAACAGAAGCTTGCCGAAGTGTTTTTCTAACTGTGGACAAGTGGTAGATTGCCGTATCTGTGGTGATCCACACTCAGTC ]
[+] EMBL CA758682 [ GCGGCGGCGGCGGG AGGGACTCCAGCAGCGACGGA TCCAGCAACGGCGGCGGGCAGCCGCAGAATCGCCGGAGAAGGAGTGGATNCAACCAGGGAAGGAGGAGGACGGGAGGCCGGACACGACGCGCCGATAGGGAGGATAGTGTGCGGAGGACCGTCTATGTCTCTGACATTGATCAGCAAGTGACTGAACAGAAGCCTGCCGAAGTG TTTTCTAACTGTGGACCAGTGGTAGATTGCCGTATCTGTGGTGATCCACACTCAGTCTTGCGTTTTGCTTTCATTGAATTTGCTGATTATGCCGGTGCAAGGGCCGCACTAACACTAGGAAGAACCATGCTTGGTTACTACCCTGTTAGAGTTTTGCCTTCCCAAACAGCTATTCTGCCTGTGAATCCTAAATTTCTTCCTCCGACGGAAGATGAAAAAGAAATGGGTCTC AGGACTGTATATTGTACTAACCTTGATTAGAAGGTTACCGAAGAAGATGTAAAGATTTTCCTTTCACCAGCT ]
[+] EMBL CF311311 [ GGAAGGAGGAGGACGGGAGGCCGGACACGACGCGCCGATAGGGAGGATAGTGTGCGGAGGACCGTCTATGTCTCTGACATTGATCAGCAAGTGACTGAACAGAAGCTTGCCGAAGTG TTTTCTAACTGTGGACAAGTGGTAGATTGCCGTATCTGTGGTGATCCACACTCAGTCTTGCGTTTTGCTTTCATTGAATTTGCTGATGATGCCGGTGCAAGGGCCGCACTAACACTAGGAGGAACCATGCTTGGTTACTACCCTGTTAGAGTTTTGCCTTCCAAAACAGCTATTCTGCCTGTGAATCCTAAATTTCTTCCTCGGACGGAAGATGAAAAAGAGAT GGTCTCAAGGACTGTATATTGTACTAACATAGATAAGAAGGTTACAGAAGAAGATGTAAAGATTTT CTTTCAGCAGCTTTGTGGGAAGGTTTCTCGGCTGAGGCTCCTTGGTGATTATGTGCACTCGAC GTGCATTGCATTTGTTGAGTTTGCTCAAGCAGAAAGCGCCA ]
[-] EMBL CB646013 [ TACCCTGTTAGAGTTTTGCCTTCCAAAACAGCTATTCTGCCTGTGAATCCTAAATTTCTTCCTCGGACGGAAGATGAAAAAGAGAT GGTCTCAAGGACTGTATATTGTACTAACATAGATAAGAAGGTTACAGAAGAAGATGTAAAGATTTT CTTTCAGCAGCTTTGTGGGAAGGTTTTTCGGCTGAGGCTCCTTGGTGATTATGTGCACTCGAC GTGCATTGCATTTGTTGAGTTTGCTCAAGCAGAAAGCGCCATTTTAGCCCTGAACTATAGTGGAATGGTTCTTGGCACACTTCCTATC AGGGTGAGCCCTTCCAAGACACCCGT GCGTCCGCGGTCGCCTCGCGTGATGTCAAACTGAGTCCGGGTTGTTCCTGAAGCTTGAGGCTGTCACCAATGGCAGGCAGAGCTTGAAACTCTAGTCATGGCGTTTAGAAATGCTGTCGCTTCGCGGAATCGGTAACTGCCGTTTTTGAGAGTATCATCTCATCATCTCTTAGGTCCAAGTAGAAGGCCGCCCTGCTGATGTTCGTCTGTTCAGAGACCCATCTGTAGGTTGGGAGAGGCTACATTTTCGTTTCTTTTGTTCAGTATGCTATGTTCAGTATCCTATAACAGCCTTTGCAGGCAATTCCGACAATAATATCTACGTATTTTCTGTCTCATTCACACTGTTCATGTGAATAAAGGGTAGTTG ]
[+] EMBL CF325588 [ AAAAAGAGAT GGTCTCAAGGACTGTATATTGTACTAACATAGATAAGAAGGTTACAGAAGAAGATGTAAAGATTTT CTTTCAGCAGCTTTGTGGGAAGGTTTCTCGGCTGAGGCTCCTTGGTGATTATGTGCACTCGAC GTGCATTGCATTTGTTGAGTTTGCTCAAGCAGAAAGCGCCATTCTAGCCCTGAACTATAGTGGAATGGTTCTTGGCACACTTCCTATC AGGGTGAGCCCTTCCAAGACACCCGT GCGTCCGCGGTCGCCTCGCGTGATGTCAAACTGAGTCCGGGTTGTTCCTGAAGCTTGAGGCTGTCACCAATGGCAGGCAGAGCTTGAAACTCTAGTCATGGCGTTTAGAAATGCTGTCGCTTCGCGGAATCGGTAACTGCCGTTTCTGAGAGTATCATCTCATCATCTCTTAGGTCCAAGTAGAAGGCCGACCTGCTGATGTTCGTCTGTTCAGAGACCCATCTGTAGGTTGGGAGAGGCTACATTTTCGTTTCTTTTGTTCAGTATGCTATGTTCAGTATCCTATAACAGCCTTTG ]
[-] EMBL CB676472 [ AAAGAGAT GGTCTCAAGGACTGTATATTGTGCTAACATAGATAAGAAGGTTACAGAAGAAGATGTAAAGATTTT CTTTCAGCAGCTTTGTGGGAAGGTTTCTCGGCTGAGGCTCCTTGGTGATTATGTGCACTCGAC GTGCATTGCATTTGTTGAGTTTGCTCAAGCAGAAAGCGCCATTTTAGCCCTGAACTATAGTGGAATGGTTCTTGGCACACTTCCTATC AGGGGGAGCCCTTCCAAGACACCCGT GCGTCCGCGGTCGCCTCGCGTGATGTCAAACTGAGTCCGGGTTGTTCCTGAAGCTTGAGGCTGTCACCAATGGCAGGCAGAGCTTGAAACTCTAGTCATGGCGTTTAGAAATGCTGTCGCTTCGCGGAATCGGTAACTGCCGTTTCTGAGAGTATCATCTCATCATCTCTTAGGTCCAAGTAGAAGGCCGACCTGCTGATGTTCGTCTGTTCAGAGACCCATCTGTAGGTTGGGAGAGGCTACATTTTCGTTTCTTTTGTTCAGTATGCTATGTTCAGTATCCTAT ]
[-] EMBL CF311312 [ CTAACATAGATAAGAAGGTTACAGAAGAAGATGTAAAGATTTT CTTTCAGCAGCTTTGTGGGAAGGTTTCTCGGCTGAGGCTCCTTGGTGATTATGTGCACTCGACNGTGCATTGCATTTGTTGAGTTTGCTCAAGCAGAAAGCGCCATTCTAGCCCTGAACTATAGTGGAATGGTTCTTGGCACACTTCCTATCNAGGGTGAGCCCTTCCAAGACACCCGTGGCGTCCGCGGTCGCCTCGCGTGATGTCAAACTGAGTCCGGGTTGTTCCTGAAGCTTGAGGCTGTCACCAATGGCAGGCAGAGCTTGAAACTCTAGTCATGGCGTTTAGAAATGCTGTCGCTTCGCGGAATCGGTAACTGCCGTTTCTGAGAGTATCATCTCATCATCTCTTAGGTCCAAGTAGAAGGCCGACCTGCTGATGTTCGTCTGTTCAGAGACCCATCTGTAGGTTGGGAGAGGCTACATTTTCGTTTCTTTTGTTCAGTATGCTATGTTCAGTATCCTATAACAGCCTTTGCAGGCAATTCCGACAATAATATCTACGTATTTTCTGTCTaaaaaa ]
[+] EMBL C26965 [ TGTAAAGATTTN NTTTCAGCAGCTTTGTGGGAAGGTTTCTCGGCTGAGGCTCCTTGGTGATTATNTGCACTCGAC GTGCATTGCATTTNTTGAGTTTNCTCAAGCAGAAAGCGCCATTCTAGCCCTGAACTATAGTGGAATGGTTCTTGGCACACTTCCTATC AGGGTGAGCCCTTCCAAGACACCCGT GCGTCCGCGGTCGCCTCGCGTNATGTCAAACTGAGTCCGGGTTGTTCCTGAAGCTTGAGGCTGTCACCAATGGCAGGCAGAGCTTGAAACTCTAGTCATGGCGTTTAGAAATNCTGTCGCTTCGCGGAATCGGTAACTGCCGTTTCTNAGAGTATCATCTCATC ]
[+] EMBL AU172855 [ AGCGCCATTCTAGCCCTGAACTATAGTGGAATGGTTCTTGGCACACTTCCTATC AGGGTGAGCCCTTCCAAGACACCCGT GCGTCCGCGGTCGCCTCGCGTGATGTCAAACTGAGTCCGGGTTGTTCCTGAAGCTTGAGGCTGTCACCAATGGCAGGCAGAGCTTGAAACTCTAGTCATGGCGTTTAGAAATGCTGTCGCTTCGCGGAATCGGTAACTGCCGTTTCTGAGAGTATCATCTCATCATCTCTTAGGTCCAAGTAGAAGGCCGACCTGCTGATGTTCGTCTGTTCANAGACCCATCTGTAGGTTGGGAGAGGCTACATTTTCGTTTCTTTTGTTCAGTATGCTATGTTCAGTATCCTATAACAGCCTTTGCAGGCAATTCCGACAATAATATCTACGTATTTTCTGTCTCAaaaaa ]
consensusID : consensus_13855#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 805 fasta sequence
[AGGAGCTCATGTCCAAGCTGAACCCGCGCGCGCAGGAGTTCGTGCCATCGTCGCGCCGCGCGCCGCCGGCGGCGGCGGCGCAGGCGGCGGGCGGGCTGTCCGCCGACGCGCCGGTGTTCGTCTCCGCCGCCGAGTACTTCGGCGGGGCCGGCGCCGGAGCCGGGCAGCTGCAGGTGGGCGGCGGCGGCGGGAGGGACTCCAGCAGCGACGGATCCAGCAACGGCGGCGGGCAGCCGCAGAATCGCCGGAGAAGGAGTGGATTCAACCAGGGAAGGAGGAGGACGGGAGGCCGGACACGACGCGCCGATAGGGAGGATAGTGTGCGGAGGACCGTCTATGTCTCTGACATTGATCAGCAAGTGACTGAACAGAAGCTTGCCGAAGTGTTTTCTAACTGTGGACAAGTAAGTTATGATATTCTTGAGGAGACATGTTACTTTATGTTACTCCCTTGATAATGTGATTTCTTATGCTCGTAATGGTGTGCCTTCCATTTTCATGTGAAACATAACGGATAAAATTGTTATCTGCCCTCTTGGTTTCAGATTTTATGGTTTGCTTGGCACGGTCTTTAAAATAAGTTACTTGACTGCAAACTGATAAATAGCTGCCTTTACCGATTGGCATTCCTGTGGCAAAGTATAAGCTTGTGCTACAATTGAATTCCTCTGCACCATCTGTTTTGAGACGTGAATTGATGCAACCACGAAGATAACTGTTATTTTGAATTATGTGTTTTGTCTCTGTAGTATTTTTGGAAGGTGAAATTAAAACATTTGATGATTCAGTAGTAATTACTTTTTAG]
[+] EMBL CB646012 [AGGAGCTCATGTCCAAGCTGAACCCGCGCGCGCAGGAGTTCGTGCCATCGTCGCGCCGCGCGCCGCCGGCGGCGGCGGCGCAGGCGGCGGGCGGGCTGTCCGCCGACGCGCCGGTGTTCGTCTCCGCCGCCGAGTACTTCGGCGGGGCCGGCGCCGGAGCCGGGCAGCTGCAGGTGGGCGGCGGCGGCGGGAGGGACTCCAGCAGCGACGGATCCAGCAACGGCGGCGGGCAGCCGCAGAATCGCCGGAGAAGGAGTGGATTCAACCAGGGAAGGAGGAGGACGGGAGGCCGGACACGACGCGCCGATAGGGAGGATAGTGTGCGGAGGACCGTCTATGTCTCTGACATTGATCAGCAAGTGACTGAACAGAAGCTTGCCGAAGTGTTTTCTAACTGTGGACAAGTAAGTTATGATATTCTTGAGGAGACATGTTACTTTATGTTACTCCCTTGATAATGTGATTTCTTATGCTCGTAATGGTGTGCCTTCCATTTTCATGTGAAACATAACGGATAAAATTGTTATCTGCCCTCTTGGTTTCAGATTTTATGGTTTGCTTGGCACGGTCTTTAAAATAAGTTACTTGACTGCAAACTGATAAATAGCTGCCTTTACCGATTGGCATTCCTGTGGCAAAGTATAAGCTTGTGCTACAATTGAATTCCTCTGCACCATCTGTTTTGAGACGTGAATTGATGCAACCACGAAGATAACTGTTATTTTGAATTATGTGTTTTGTCTCTGTAGTATTTTTGGAAGGTGAAATTAAAACATTTGATGATTCAGTAGTAATTACTTTTTAG]
consensusID : consensus_13855#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 693 fasta sequence
[TTTCCCTTNCCAAAACAGGTTATTCTCCCTGGTGAANCCAAAATTTCTCCCTCGGACGGAAAGATGNAAAAAGAGATTGGTCTCAAGGACTGTATATTNTACTAACATTGGATTAAGAAGGTTACAGAAGAAGATGTAAAGATTTTTCTTTCAGCAGCTTTGTGGGAAGGTTTCCCGGCTGAGGCNCCTTGGTGATTATGGTGCACTCGACGTGCATTGCATTTGTTGAGTTTGCTCAAGCAGAAAGCGCCATTCTAGCCCTGAACTATAGTGGAATGGTTCTTGGCACACTTCCTATCAGGGTGAGCCCTTCCAAGACACCCGTGCGTCCGCGGTCGCCTCGCGTGATGTCAAACTGAGTCCGGGTTGTTCCTGAAGCTTGAGGCTGTCNCCAATGGCAGGCAGAGCTTGAAACTCTAGTCATGGCGTTTAGAAATGCTNGTCTTCGCGGAATCGGTAACTGCCGTTTCTGAGAGTATCATCTCATCATCTCTTAGGTCCAAGTAGAAGGCCGACCTGCTGATGTTCGTCTGTTCAGAGACCCATCTGTAGGTTGGGAGAGGCTACATTTTCGTTTCTTTTGTTCAGTATGCTATGTTCAGTATCCTATAACANCCTTTGCAGGCAATTCCGACAATAATATCTACGTNTTTTNTGTNTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AU030542 [TTTCCCTTNCCAAAACAGGTTATTCTCCCTGGTGAANCCAAAATTTCTCCCTCGGACGGAAAGATGNAAAAAGAGATTGGTCTCAAGGACTGTATATTNTACTAACATTGGATTAAGAAGGTTACAGAAGAAGATGTAAAGATTTTTCTTTCAGCAGCTTTGTGGGAAGGTTTCCCGGCTGAGGCNCCTTGGTGATTATGGTGCACTCGACGTGCATTGCATTTGTTGAGTTTGCTCAAGCAGAAAGCGCCATTCTAGCCCTGAACTATAGTGGAATGGTTCTTGGCACACTTCCTATCAGGGTGAGCCCTTCCAAGACACCCGTGCGTCCGCGGTCGCCTCGCGTGATGTCAAACTGAGTCCGGGTTGTTCCTGAAGCTTGAGGCTGTCNCCAATGGCAGGCAGAGCTTGAAACTCTAGTCATGGCGTTTAGAAATGCTNGTCTTCGCGGAATCGGTAACTGCCGTTTCTGAGAGTATCATCTCATCATCTCTTAGGTCCAAGTAGAAGGCCGACCTGCTGATGTTCGTCTGTTCAGAGACCCATCTGTAGGTTGGGAGAGGCTACATTTTCGTTTCTTTTGTTCAGTATGCTATGTTCAGTATCCTATAACANCCTTTGCAGGCAATTCCGACAATAATATCTACGTNTTTTNTGTNTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_13855#0 TTTCTCCTTCACCATTCGCCTCCTCCTCCTCTCGAGGGAGAGAAGAAAAAAGCTAACGCC 60
consensus_13855#2 ------------------------------------------------------------
consensus_13855#1 ------------------------------------------------------------
consensus_13855#0 GCCGCAAGAATCCAAGAAGGAGAAGAGAGAGAATTTGATCTCTTCCTCTCCTTCCCCGAG 120
consensus_13855#2 ------------------------------------------------------------
consensus_13855#1 ------------------------------------------------------------
consensus_13855#0 GCTCTGAGGCGAGGTAGGTTGTCGCGGGATCAATAATGGTGGCCATCGAGGCGGCGGCGG 180
consensus_13855#2 ------------------------------------------------------------
consensus_13855#1 ------------------------------------------------------------
consensus_13855#0 CGGCGGCGGCGGCGGAGAGGGGCCCGATCCGGGCGGTGGCGGAGGCGGAGGCGGAGGCGG 240
consensus_13855#2 ------------------------------------------------------------
consensus_13855#1 ------------------------------------------------------------
consensus_13855#0 AGGCGAAGGTGGTGGATGTGGAGGGGAAGGAGGAGGAGGAGGAGGCGGCCAAGGTGGAGG 300
consensus_13855#2 ------------------------------------------------------------
consensus_13855#1 ------------------------------------------------------------
consensus_13855#0 AGGAGGAGGAGGAGGAGAGGGAGTACAAGAGCGACATGAGGAAGCTGGAGGAGCTCATGT 360
consensus_13855#2 ------------------------------------------------------------
consensus_13855#1 ------------------------------------------------------------
consensus_13855#0 CCAAGCTGAACCCGCGCGCGCAGGAGTTCGTGCCATCGTCGCGCCGCGCGCCGCCGGCGG 420
consensus_13855#2 ------------------------------------------------------------
consensus_13855#1 ------------------------------------------------------------
consensus_13855#0 CGGCGGCGCAGGCGGCGGGCGGGCTGTCCGCCGACGCGCCGGTGTTCGTCTCCGCCGCCG 480
consensus_13855#2 ------------------------------------------------------------
consensus_13855#1 ------------------------------------------------------------
consensus_13855#0 AGTACTTCGGCGGGGCCGGCGCCGGAGCCGGGCAGCTGCAGGTGGGCGGCGGCGGCGGGA 540
consensus_13855#2 ------------------------------------------------------------
consensus_13855#1 ------------------------------------------------------------
consensus_13855#0 GGGACTCCAGCAGCGACGGATCCAGCAACGGCGGCGGGCAGCCGCAGAATCGCCGGAGAA 600
consensus_13855#2 ------------------------------------------------------------
consensus_13855#1 ------------------------------------------------------------
consensus_13855#0 GGAGTGGATTCAACCAGGGAAGGAGGAGGACGGGAGGCCGGACACGACGCGCCGATAGGG 660
consensus_13855#2 ------------------------------------------------------------
consensus_13855#1 ------------------------------------------------------------
consensus_13855#0 AGGATAGTGTGCGGAGGACCGTCTATGTCTCTGACATTGATCAGCAAGTGACTGAACAGA 720
consensus_13855#2 ------------------------------------------------------------
consensus_13855#1 ------------------------------------------------------------
consensus_13855#0 AGCTTGCCGAAGTGTTTTCTAACTGTGGACAAGTGGTAGATTGCCGTATCTGTGGTGATC 780
consensus_13855#2 ------------------------------------------------------------
consensus_13855#1 ------------------------------------------------------------
consensus_13855#0 CACACTCAGTCTTGCGTTTTGCTTTCATTGAATTTGCTGATGATGCCGGTGCAAGGGCCG 840
consensus_13855#2 ------------------------------------------------------------
consensus_13855#1 ------------------------------------------------------------
consensus_13855#0 CACTAACACTAGGAGGAACCATGCTTGGTTACTACCCTGTTAGAGTTTTGCCTTCCAAAA 900
consensus_13855#2 ---------------------------------------------TTTCCCTTNCCAAAA 15
consensus_13855#1 --------------------------AGGAGCTCATGTCCAAGCTGAACCCGCGCGCGCA 34
* * *
consensus_13855#0 CAG-CTATTCTGCCTG-TGAATCCTAAATTTCTTCCTCGGACGGAA--GATGAAAAA-GA 955
consensus_13855#2 CAGGTTATTCTCCCTGGTGAANCCAAAATTTCTCCCTCGGACGGAA-AGATGNAAAAAGA 74
consensus_13855#1 GGAGTTCGTGCCATCGTCGCGCCGCGCGCCGCCGGCGGCGGCGGCGCAGGCGGCGGGCGG 94
* * * * * * * * *** * * *
consensus_13855#0 G--AT-GGTCTCAAGGACTGTATATTGTACTAACATAGA----TAAGAAGGTTACAGAAG 1008
consensus_13855#2 G--ATTGGTCTCAAGGACTGTATATTNTACTAACATTGGAT--TAAGAAGGTTACAGAAG 130
consensus_13855#1 GCTGTCCGCCGACGCGCCGGTGTTCGTCTCCGCCGCCGAGTACTTCGGCGGGGCCGGCGC 154
* * * * * * ** * * * * * * ** * *
consensus_13855#0 AAGATGTAAAGATTTT-CTTTCAGCAGCTTTGTGGGAAGGTTTCTCGGCTGAGGCTCCTT 1067
consensus_13855#2 AAGATGTAAAGATTTTTCTTTCAGCAGCTTTGTGGGAAGGTTTCCCGGCTGAGGCNCCTT 190
consensus_13855#1 CGGAGCCGGGCAGCTGCAGGTGGGCGGCGGCGGCGGGAGGGACTCCAGCAGCGACGGATC 214
** * * * ** ** * ** *** * ** * * * *
consensus_13855#0 -GGTGATTATG-TGCAC----------TCGACGTGCATTGCATTTGTTGAGTTTGCTCAA 1115
consensus_13855#2 -GGTGATTATGGTGCAC----------TCGACGTGCATTGCATTTGTTGAGTTTGCTCAA 239
consensus_13855#1 CAGCAACGGCGGCGGGCAGCCGCAGAATCGCCGGAGAAGGAGTGGATTCAACCAGGGAAG 274
* * * * * *** ** * * * ** * * *
consensus_13855#0 GCAGAAAGCGCCATTCTAGCCCTGAA----CTATAGTG-GAATGGTTCTTGGCACACTTC 1170
consensus_13855#2 GCAGAAAGCGCCATTCTAGCCCTGAA----CTATAGTG-GAATGGTTCTTGGCACACTTC 294
consensus_13855#1 GAGGAGGACGGGAGGCCGGACACGACGCGCCGATAGGGAGGATAGTGTGCGGAGGACCGT 334
* ** ** * * * * ** * **** * * ** ** ** **
consensus_13855#0 CTATCAGGGTGAGCCCTTCCAAGACACCCGTGCGTCCGCGGTCGCCTCGCGTGATGTCAA 1230
consensus_13855#2 CTATCAGGGTGAGCCCTTCCAAGACACCCGTGCGTCCGCGGTCGCCTCGCGTGATGTCAA 354
consensus_13855#1 CTATGTCTCTGACATTGATCAGCAAGTGACTGAACAGAAGCTTGCCG-AAGTGTTTTCTA 393
**** *** ** * ** * * *** *** * ** *
consensus_13855#0 ACTGAGTCCGGGT---------TGTTCCTGAAG----------CTTGAGGCTGTCACCAA 1271
consensus_13855#2 ACTGAGTCCGGGT---------TGTTCCTGAAG----------CTTGAGGCTGTCNCCAA 395
consensus_13855#1 ACTGTGGACAAGTAAGTTATGATATTCTTGAGGAGACATGTTACTTTATGTTACTCCCTT 453
**** * * ** * *** *** * *** * * * **
consensus_13855#0 TGGCAGGCAGAGCTTGAAACTC-TAGTCATGGCGTTTAGAAATGCTGTCG---CTTCGCG 1327
consensus_13855#2 TGGCAGGCAGAGCTTGAAACTC-TAGTCATGGCGTTTAGAAATGCTNGT----CTTCGCG 450
consensus_13855#1 GATAATGTGATTTCTTATGCTCGTAATGGTGTGCCTTCCATTTTCATGTGAAACATAACG 513
* * * * *** ** * ** ** * * * * * **
consensus_13855#0 GA----ATCGGTAACTGCC------GTTTCTGAGAGTATCATCT------CATCATCTCT 1371
consensus_13855#2 GA----ATCGGTAACTGCC------GTTTCTGAGAGTATCATCT------CATCATCTCT 494
consensus_13855#1 GATAAAATTGTTATCTGCCCTCTTGGTTTCAGATTTTATGGTTTGCTTGGCACGGTCTTT 573
** ** * ** ***** ***** ** *** * * ** *** *
consensus_13855#0 TAGGTCCA--AGTAGAAGGCCGACCTGCTGATGTTCGTCTGTTCAGA--GACCCATCTGT 1427
consensus_13855#2 TAGGTCCA--AGTAGAAGGCCGACCTGCTGATGTTCGTCTGTTCAGA--GACCCATCTGT 550
consensus_13855#1 AAAATAAGTTACTTGACTGCAAACTGATAAATAGCTGCCTTTACCGATTGGCATTCCTGT 633
* * * * ** ** ** ** * ** * * ** * * ****
consensus_13855#0 AGGTTGGGAGAGGCTACATTTTCGTTTCTTTTGTTCAGTATGCTATGTTCAGTATCCTAT 1487
consensus_13855#2 AGGTTGGGAGAGGCTACATTTTCGTTTCTTTTGTTCAGTATGCTATGTTCAGTATCCTAT 610
consensus_13855#1 GGCAAAGTATAAGCTTGTGCTACAATTGAATTCCTCTGCACCATCTGTTTTGAGACGTGA 693
* * * * *** * * ** ** ** * * * **** * * *
consensus_13855#0 AACAGCCTTTGCAGGCAATT--CCGACAATAATATCTACGTATTTTCTGTCTCATTCACA 1545
consensus_13855#2 AACANCCTTTGCAGGCAATT--CCGACAATAATATCTACGTNTTTTNTGTNTCAAAAAAA 668
consensus_13855#1 ATTGATGCAACCACGAAGATAACTGTTATTTTGAATTATGTGTTTTGTCTCTGTAGTATT 753
* ** * * * * * * * * ** ** **** * * * *
consensus_13855#0 CTGTTCATGTGAATATGTGATAGTTGAAATTCCATATCTGACGGTGAACTTAGGGTTTTA 1605
consensus_13855#2 A----AAAAAAAAAAAAAAAAAAAAAAAA------------------------------- 693
consensus_13855#1 TTTGGAAGGTGAAATTAAAACATTTGATGATTCAGTAGTAATTACTTTTTAG-------- 805
* ** * * *
consensus_13855#0 TTTTTCATTACTAGTGAAATTGAAATGATTAATGTG 1641
consensus_13855#2 ------------------------------------
consensus_13855#1 ------------------------------------
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||