These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13884#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 1382 fasta sequence [GCCGTTGAAGAAGCAACCAATGGCTGGATTAAGGTCATAGCGCTTCCAATCCTCCTCCTCCTTCCTCCGCTCGCCGTCTTCTCGACGACGACCCGCGGCCACCGCCGCGCCGCCC-TCCTCGCCGCCGCCGCCGCCGCCGTC-TCCGCAGAATCTG-ATCG-ATGGC-GCCG-TCG-TCGACG-TCGTCGGA-GGG-TGCCTCCGACGA-GTGG-TTGCCACCCAGCCGGCGGCCGGAGCTGGCGGACGTGGTCCCCGTGACGCAGGACGACGGGCCCCACCCCGTGGTGGC-CATCGCCTACCGGGACGAGTTCCGCGAGGTCATGGACTACTTCCGCGCCCTCTACTTCGCCGGCGAGCGCAGCGTCCGCGCCCTCCACCTCACCGCCGAGGTCATCGACCTTAATCCCGGCAACTACACGGTGTGGCATTTTAGGCGTCTTGTTCTAGAGGCACTGGATGCTGATCTGCGTGAGGAAATGGATTTTGTGGACCGAATTGCTGAATGTAACCCAAAAAATTATCAAATCTGGCATCACAAGAGATGGCTTGCGGAGAAATTAGGACCAGATATTGCAAATAAAGAGCACGAATTTACAAGGAAGATACTTTCTATGGATGCTAAAAATTACCATGCTTGGTCTCATAGGCAGTGGGTTCTTCAAGCACTGGGTGGAT-GGGAGACTGAACTACAGTATTGCAACCAGCTGCTTGAGGAAGACGTCTTCAATAATTCAGCTTGGAATCAGAGATACCTTGTAATAACAAGTTCACCACTTCTTGGAGGCCTTGCAGCAATGCGTGACTCGGAAGTGGATTACACAGTTGGGGCTATTCTGGCTAACCCTCAGAATGAAAGCCCCTGGAGATACCTCAAAGGCCTGTACAAGGGTGAAAATAAC-TTGCTGAT-GGC-TGATGAGCGCATCTCTGATGTTT-GTCTC-AAGGT-CCTGAAACATGATTC-GACCTGC-GTATTTGCTTT-GAGCTTGCTG-CTCGATCTTCTTCAAATTGGTTTACAACC-TTCAGATGAACTCAAAGGAACTATCGAAGCAATAAAGAACTCTGATCCTGAAGCAGATGAAGCAGTAGATGCTGATCTTGCGACTGCAATCTGCTCAATATTGCAGAGATGTGATCCCCTGCGGATAAATTACTGGTCCTGGTACAGGACCACTATTTCTTCTCAAACCTGAAGCATGCAGTGGCCTCCATGAGGTCATAATGGAGATATCTTCTATCTTCGTGTGATTCTGGGCGTTGAGGTGCCTAGCTACATTTGTTATGAACTTTCCTTGGGCATAACTGATCACTGATATTACTC-CAATATTGTGTTCTTGTGCATCGTATGTTATACCAGATATTATATTGGGTTGCAATTCCTTGTGATGTAAAAAAAA] [+] EMBL AU068134 [GCCGTTGAAGAAGCAACCAATGGCTGGATTAAGGTCATAGCGCTTCCAATCCTCCTCCTCCTTCCTCCGCTCGCCGTCTTCTCGACGACGACCCGCGGCCACCGCCG GCCGCCC TCCTCGCCGCCGCCGCCGCCGCCGTC TCCGCAGAATCTG ATCG ATGGC GCCG TCG TCGACG TCGTCGGA GGG TGCCTCCGACGA GTGG TTGCCACCCAGCCGGCGGCCGGAGCTGGCGGACGTGGTCCCCGTGACGCAGGACGACGGGCCCCACNCCGTGGTTGN CATCGCCTACCGGGACGAGTTCCGCGAAGTCATNGACTACTTCCGGGCCCTCTACTTCGCCGGCG ] [+] EMBL AK060892 [ ATTAAGGTCATAGCGCTTCCAATCCTCCTCCTCCTTCCTCCGCTCGCCGTCTTCTCGACGACGACCCGCGGCCACCGCCGCGCCGCCC TCCTCGCCGCCGCCGCCGCCGCCGTC TCCGCAGAATCTG ATCG ATGGC GCCG TCG TCGACG TCGTCGGA GGG TGCCTCCGACGA GTGG TTGCCACCCAGCCGGCGGCCGGAGCTGGCGGACGTGGTCCCCGTGACGCAGGACGACGGGCCCCACCCCGTGGTGGC CATCGCCTACCGGGACGAGTTCCGCGAGGTCATGGACTACTTCCGCGCCCTCTACTTCGCCGGCGAGCGCAGCGTCCGCGCCCTCCACCTCACCGCCGAGGTCATCGACCTTAATCCCGGCAACTACACGGTGTGGCATTTTAGGCGTCTTGTTCTAGAGGCACTGGATGCTGATCTGCGTGAGGAAATGGATTTTGTGGACCGAATTGCTGAATGTAACCCAAAAAATTATCAAATCTGGCATCACAAGAGATGGCTTGCGGAGAAATTAGGACCAGATATTGCAAATAAAGAGCACGAATTTACAAGGAAGATACTTTCTATGGATGCTAAAAATTACCATGCTTGGTCTCATAGGCAGTGGGTTCTTCAAGCACTGGGTGGAT GGGAGACTGAACTACAGTATTGCAACCAGCTGCTTGAGGAAGACGTCTTCAATAATTCAGCTTGGAATCAGAGATACCTTGTAATAACAAGTTCACCACTTCTTGGAGGCCTTGCAGCAATGCGTGACTCGGAAGTGGATTACACAGTTGGGGCTATTCTGGCTAACCCTCAGAATGAAAGCCCCTGGAGATACCTCAAAGGCCTGTACAAGGGTGAAAATAAC TTGCTGAT GGC TGATGAGCGCATCTCTGATGTTT GTCTC AAGGT CCTGAAACATGATTC GACCTGC GTATTTGCTTT GAGCTTGCTG CTCGATCTTCTTCAAATTGGTTTACAACC TTCAGATGAACTCAAAGGAACTATCGAAGCAATAAAGAACTCTGATCCTGAAGCAGATGAAGCAGTAGATGCTGATCTTGCGACTGCAATCTGCTCAATATTGCAGAGATGTGATCCCCTGCGGATAAATTACTGGTCCTGGTACAGGACCACTATTTCTTCTCAAACCTGAAGCATGCAGTGGCCTCCATGAGGTCATAATGGAGATATCTTCTATCTTCGTGTGATTCTGGGCGTTGAGGTGCCTAGCTACATTTGTTATGAACTTTCCTTGGGCATAACTGATCACTGATATTACTC CAATATTGTGTTCTTGTGCATCGTATGTTAT ] [+] EMBL AU161533 [ CGCTTCCAATCCTCCTCCTCCTTCCTCCGCTCGCCGTCTTCTCGACGACGACCCGCGGCCACCGC NGCCGCCCATCCTCGCCGCCGCCGCCGCCGCCGTCATCCG A AATCTGAATCGAATGGCAGCCGNTCGATCGACGATCGTCGGATGGGNTGCCTCCGA GANGTGGATTGCCACCCAGCCGGCGGCCGGAGCTGGCGGACGTGGTCCCCGTGACGCAGGACGACGGG CCCACCCCGT GTGGCACATCGCCTACCGGGACGAGTTCCGCGA GTCATGGACTACTTCCGCGCCCTCTACTTCGCCGGCG ] [+] EMBL CA758813 [ CCTCCTTCCTCCGCTCGCCGTCTTCTCGACGACGACCCGCGGCCACCGCCGCGCCGCCC TCCTCGCCGCCGCCGCCGCCGCCGTC TCCGCAGAATCTG ATCG ATGGC GCCG TCG TCGACG TCGTCGGA GGG TGCCTCCGACGA GTGG TTGCCACCCAGCCGGCGGCCGGAGCTGGCGGACGTGGTCCCCGTGACGCAGGACGACGGGCCCCACCCCGTGGTGGC CATCGCCTACCGGGACGAGTTCCGCGAGGTCATGGACTACTTCCGCGCCCTCTACTTCGCCGGCGAGCGCAGCGTCCGCGCCCTCCACCTCACCGCCGAGGTCATCGACCTTAATCCCGGCAACTACACGGTGTGGCATTTTAGGCGTCTTGTTCTAGAGGCACTGGATGCTGATCTGCGTGAGGAAATGGATTTTGTGGACCGAATTGCTGAATGT ACCCCAAAAATTATCAAATCTGGCATCACAAGAGATGGCTTGCGGAGAAATTAGGACCAGATATTGCAAATAAGGAGCCCGAATTTAC AGGAAGATAC TTCTATGGATGCTAAAAATTA CATGCTTGGTCTCATA GCGGGGGGTTCTTCA ] [+] EMBL OSR18361A [ CCTCCTTCCTCCGCTCGCCGTCTTCTCGACGACGACCCNCGGCCACCGCCG GCCGCCC TCCTCGCCGCCGCCGCCGCCGCCGTC TCCGCAGAATCTG ATCG ATGGC GCCG TCG TCGACG TCGTCGGA GGG TGCCTCCGACGA GTGG TTGCCACCCAGCCGGCGGCCGGAGCTGGNGGACGTGGTCCCCGTGACGNAGGACGACGGGNCCCAC ] [+] EMBL AK098845 [ TCCGCTCGCCGTCTTCTCGACGACGACCCGCGGCCACCGCCGCGCCGCCC TCCTCGCCGCCGCCGCCGCCGCCGTC TCCGCAGAATCTG ATCG ATGGC GCCG TCG TCGACG TCGTCGGA GGG TGCCTCCGACGA GTGG TTGCCACCCAGCCGGCGGCCGGAGCTGGCGGACGTGGTCCCCGTGACGCAGGACGACGGGCCCCACCCCGTGGTGGC CATCGCCTACCGGGACGAGTTCCGCGAGGTCATGGACTACTTCCGCGCCCTCTACTTCGCCGGCGAGCGCAGCGTCCGCGCCCTCCACCTCACCGCCGAGGTCATCGACCTTAATCCCGGCAACTACACGGTGTGGCATTTTAGGCGTCTTGTTCTAGAGGCACTGGATGCTGATCTGCGTGAGGAAATGGATTTTGTGGACCGAATTGCTGAATGTAACCCAAAAAATTATCAAATCTGGCATCACAAGAGATGGCTTGCGGAGAAATTAGGACCAGATATTGCAAATAAAGAGCACGAATTTACAAGGAAGATACTTTCTATGGATGCTAAAAATTACCATGCTTGGTCTCATAGGCAGTGGGTTCTTCAAGCACTGGGTGGAT GGGAGACTGAACTACAGTATTGCAACCAGCTGCTTGAGGAAGACGTCTTCAATAATTCAGCTTGGAATCAGAGATACCTTGTAATAACAAGTTCACCACTTCTTGGAGGCCTTGCAGCAATGCGTGACTCGGAAGTGGATTACACAGTTGGGGCTATTCTGGCTAACCCTCAGAATGAAAGCCCCTGGAGATACCTCAAAGGCCTGTACAAGGGTGAAAATAAC TTGCTGAT GGC TGATGAGCGCATCTCTGATGTTT GTCTC AAGGT CCTGAAACATGATTC GACCTGC GTATTTGCTTT GAGCTTGCTG CTCGATCTTCTTCAAATTGGTTTACAACC TTCAGATGAACTCAAAGGAACTATCGAAGCAATAAAGAACTCTGATCCTGAAGCAGATGAAGCAGTAGATGCTGATCTTGCGACTGCAATCTGCTCAATATTGCAGAGATGTGATCCCCTGCGGATAAATTACTGGTCCTGGTACAGGACCACTATTTCTTCTCAAACCTGAAGCATGCAGTGGCCTCCATGAGGTCATAATGGAGATATCTTCTATCTTCGTGTGATTCTGGGCGTTGAGGTGCCTAGCTACATTTGTTATGAACTTTCCTTGGGCATAACTGATCACTG ] [+] EMBL AK104483 [ CCGCTCGCCGTCTTCTCGACGACGACCCGCGGCCACCGCCGCGCCGCCC TCCTCGCCGCCGCCGCCGCCGCCGTC TCCGCAGAATCTG ATCG ATGGC GCCG TCG TCGACG TCGTCGGA GGG TGCCTCCGACGA GTGG TTGCCACCCAGCCGGCGGCCGGAGCTGGCGGACGTGGTCCCCGTGACGCAGGACGACGGGCCCCACCCCGTGGTGGC CATCGCCTACCGGGACGAGTTCCGCGAGGTCATGGACTACTTCCGCGCCCTCTACTTCGCCGGCGAGCGCAGCGTCCGCGCCCTCCACCTCACCGCCGAGGTCATCGACCTTAATCCCGGCAACTACACGGTGTGGCATTTTAGGCGTCTTGTTCTAGAGGCACTGGATGCTGATCTGCGTGAGGAAATGGATTTTGTGGACCGAATTGCTGAATGTAACCCAAAAAATTATCAAATCTGGCATCACAAGAGATGGCTTGCGGAGAAATTAGGACCAGATATTGCAAATAAAGAGCACGAATTTACAAGGAAGATACTTTCTATGGATGCTAAAAATTACCATGCTTGGTCTCATAGGCAGTGGGTTCTTCAAGCACTGGGTGGAT GGGAGACTGAACTACAGTATTGCAACCAGCTGCTTGAGGAAGACGTCTTCAATAATTCAGCTTGGAATCAGAGATACCTTGTAATAACAAGTTCACCACTTCTTGGAGGCCTTGCAGCAATGCGTGACTCGGAAGTGGATTACACAGTTGGGGCTATTCTGGCTAACCCTCAGAATGAAAGCCCCTGGAGATACCTCAAAGGCCTGTACAAGGGTGAAAATAAC TTGCTGAT GGC TGATGAGCGCATCTCTGATGTTT GTCTC AAGGT CCTGAAACATGATTC GACCTGC GTATTTGCTTT GAGCTTGCTG CTCGATCTTCTTCAAATTGGTTTACAACC TTCAGATGAACTCAAAGGAACTATCGAAGCAATAAAGAACTCTGATCCTGAAGCAGATGAAGCAGTAGATGCTGATCTTGCGACTGCAATCTGCTCAATATTGCAGAGATGTGATCCCCTGCGGATAAATTACTGGTCCTGGTACAGGACCACTATTTCTTCTCAAACCTGAAGCATGCAGTGGCCTCCATGAGGTCATAATGGAGATATCTTCTATCTTCGTGTGATTCTGGGCGTTGAGGTGCCTAGCTACATTTGTTATGAACTTTCCTTGGGCATAACTGATCACTGATATTACTC CAATATTGTGTTCTTGTGCATCGTATGT ] [+] EMBL CF322894 [ GACGACCCGCGGCCACCGCCGCGCCGCCC TCCTCGCCGCCGCCGCCGCCGCCGTC TCC GAATCTG ATCG ATGGC GCCG TCG TCGACG TCGTCGGA GGG TGCCTCCGACGA GTGG TTGCCACCCAGCCGGCGGCCGGAGCTGGCGGACGTGGTCCCCGTGACGCAGGACGACGGGCCCCACCCCGTGGTGGC CATCGCCTACCGGGACGAGTTCCGCGAGGTCATGGACTACTTCCGCGCCCTCTACTTCGCCGGCGAGCGCAGCGTCCGCGCCCTCCACCTCACCGCCGAGGTCATCGACCTTAATCCCGGCAACTACACGGTGTGGCATTTTAGGCGTCTTGTTCTAGAGGCACTGGATGCTGATCTGCGTGAGGAAATGGATTTTGTGGACCGAATTGCTGAATGTAACCCAAAAAATTATCAAATCTGGCATCACAAGAGATGGCTTGCGGAGAAATTAGGACCAGATATTGCAAATAAAGAGCACGAATTTACAAGGAAGATACTTTCTATGGATGCTAAAAATTACCATGC ] [+] EMBL CF324111 [ TCGACG TCGTCGGA GGG TGCCTCCGACGA GTGG TTGCCACCCAGCCGGCGGCCGGAGCTGGCGGACGTGGTCCCCGTGACGCAGGACGACGGGCCCCACCCCGTGGTGGC CATCGCCTACCGGGACGAGTTCCGCGAGGTCATGGACTACTTCCGCGCCCTCTACTTCGCCGGCGAGCGCAGCGTCCGCGCCCTCCACCTCACCGCCGAGGTCATCGACCTTAATCCCGGCAACTACACGGTGTGGCATTTTAGGCGTCTTGTTCTAGAGGCACTGGATGCTGATCTGCGTGAGGAAATGGATTTTGTGGACCGAATTGCTGAATGTAACCCAAAAAATTATCAAATCTGGCATCACAAGAGATGGCTTGCGGAGAAATTAGGACCAGATATTGCAAATAAAGAGCACGAATTTACAAGGAAGATACTTTCTATGGATGCTAAAAATTACCATGCTTGGTCT ATAGGCAGTGGGTTCTTCAAGCACTGGGTGGATGGGGAGACTGAACTACAGTATTGCAACCAGCTGCTTGAGGAAGACGTCTTCAATAATTCAGCTTGGAATCAGAG ] [-] EMBL CB655029 [ ATTACCATGCTGGGTCTCATAGGCAGTGGGTTCTTCAAGCACTGGGTGGAT GGGAGACTGAACTACAGTATTGCAACCAGCTGCTTGAGGAAGACGTCTTCAATAATTCAGCTTGGAATCAGAGATACCTTGTAATAACAAGTTCACCACTTCTTGGAGGCCTTGCAGCAATGCGTGACTCGGAAGTGGATTACACAGTTGGGGCTATTCTGGCTAACCCTCAGAATGAAAGCCCCTGGAGATACCTCAAAGGCCTGTACAAGGGTGAAAATAAC TTGCTGAT GGC TGATGAGCGCATCTCTGATGTTT GTCTC AAGGT CCTGAAACATGATTC GACCTGC GTATTTGCTTT GAGCTTGCTG CTCGATCTTCTTCAAATTGGTTTACAACC TTCAGATGAACTCAAAGGAACTATCGAAGCAATAAAGAACTCTGATCCTGAAGCAGATGAAGCAGTAGATGCTGATCTTGCGACTGCAATCTGCTCAATATTGCAGAGATGTGATCCCCTGCGGATAAATTACTGGTCCTGGTACAGGACCACTATTTCTTCTCAAACCTGAAGCATGCAGTGGCCTCCATGAGGTCATAATGGAGATATCTTCTATCTTCGTGTGATTGGGGGCGTTGAGGTGCCTAGCTACATTTGTTATGAACTTTCCTTGGGCATAACTGATCACTGATATTTCTCAGGGTATTGTCTT ] [+] EMBL AU161534 [ gGAAAATAACTTTGCTGATGGGCTTGATGAGCGCATCTCTGATGTTTGGTCTCAAAGGTCCCTGAAACATGANTCGGACCTGCGGTATTTGCTTTGGAGCTTGCTGNCTCGATCTTCTTCAAATTGGTTTACAACCTTTCAGATGAACTCAAAGGAACTATCGAAGCAATAAAGAACTCTGATCCTGAAGCAGATGAAGCAGTAGATGCTGATCTTGCGACTGCAATCTGCTCAATATTGCAGAGATGTGAT CCCTGCGGATAAATTACT GTCCTGGTACAGGACCACTATTTCTTCTCAAACCTGAAGCATGCAGTGGCCTCCATGAGGTCATAATGGAGATATCTTCTATCTTCGTGTGATTCTGGGCGTTGAGGTGCCTAGCTACATTTGTTATGAACTTTCCTTGGGCATAACTGATCACTGATATTACTC CAATATTGTGTTCTTGTGCATCGTATGTTAaa ] [+] EMBL AU173239 [ CTGC GTATTTGCTTT GAGCTTGCTG CTCGATCTTCTTCAAATTGGTTTACAACC TTCAGATGAACTCAAAGGAACTATCGAAGCAATAAAGAACTCTGATCCTGAAGCAGATGAAGCAGTAGATGCTGATCTTGCGACTGCAATCTGCTCAATATTGCAGAGATGTGATCCCCTGCGGATAAATTACTGGTCCTGGTACAGGACCACTATTTCTTCTCAAACCTGAAGCATGCAGTGGCCTCCATGAGGTCATAATGGAGATATCTTCTATCTTCGTGTGATTCTGGGCGTTGAGGTGCCTAGCTACATTTGTTATGAACTTTCCTTGGGCATAACTGATCACTGATATTACTC CAATATTGTGTTCTTGTGCATCGTATGTTATTCCAGATATTATATTGGGTTGCAATTCCTTGTGATGTAAAAAAAA] consensusID : consensus_13884#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 559 fasta sequence [GACTCCCCTTCGCCGGCGCTGTAGGGGGAAGAGAGACCTGATCCCTTCCACCGCCTACGTGGAGTTCCTCTACTATCCTAGGCCGGCGTGGAGTGATACGTGAGCCGTGAGCGTGGAGATCCATCCATCCCACTGCGGTTTAGGACTGCAGTTAGTGGAGGATTTGATTCGATTTTTGTGTTTTTTTTGTTTGATTTCTCTGGCTGCAGCAGAATCTGATCGATGGCGCCGTCGTCGACGTCGTCGGAGGGTGCCTCCGACGAGTGGTTGCCACCCAGCCGGCGGCCGGAGCTGGCGGACGTGGTCCCCGTGACGCAGGACGACGGGCCCCACCCCGTGGTGGCCATCGCCTACCGGGACGAGTTCCGCGAGGTCATGGACTACTTCCGCGCCCTCTACTTCGCCGGCGAGCGCAGCGTCCGCGCCCTCCACCTCACCGCCGAGGTCATCGACCTTAATCCCGGCAACTACACGGTGTGGCATTTTAGGCGTCTTGTTCTAGAGGCACTGGATGCTGATCTGCGTGAGGAAATGGATTCTGTGGACCGAATTGCTGAAT] [+] EMBL CB655028 [GACTCCCCTTCGCCGGCGCTGTAGGGGGAAGAGAGACCTGATCCCTTCCACCGCCTACGTGGAGTTCCTCTACTATCCTAGGCCGGCGTGGAGTGATACGTGAGCCGTGAGCGTGGAGATCCATCCATCCCACTGCGGTTTAGGACTGCAGTTAGTGGAGGATTTGATTCGATTTTTGTGTTTTTTTTGTTTGATTTCTCTGGCTGCAGCAGAATCTGATCGATGGCGCCGTCGTCGACGTCGTCGGAGGGTGCCTCCGACGAGTGGTTGCCACCCAGCCGGCGGCCGGAGCTGGCGGACGTGGTCCCCGTGACGCAGGACGACGGGCCCCACCCCGTGGTGGCCATCGCCTACCGGGACGAGTTCCGCGAGGTCATGGACTACTTCCGCGCCCTCTACTTCGCCGGCGAGCGCAGCGTCCGCGCCCTCCACCTCACCGCCGAGGTCATCGACCTTAATCCCGGCAACTACACGGTGTGGCATTTTAGGCGTCTTGTTCTAGAGGCACTGGATGCTGATCTGCGTGAGGAAATGGATTCTGTGGACCGAATTGCTGAAT] consensusID : consensus_13884#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 379 fasta sequence [GTTTACCAACCTTCAGATGAACTCAAAGGANCTATCGAAGCAATAAAGAACTCTGATCCTGAAGCAGATGAAGCAGTAGATGCTGATCTTGCGACTGCAATCTGCTCAATATTGCAGAGATGTGATCCCTGCGGATAAATTACTGGTCCTGGTACAGGACCACTATTTCTTCTCAAACCTGAAGCATGCAGTGGCCTCCATGAGGTCATAATGGAGATATCTTCTATCTTCGTGTGATTCTGGGCGTTGAGGTGCCTAGCTACATTTGTTATGAACTTTCCTTGGGCATAACTGATCACTGATATTACTCNAATATTGTGTTCTTGTGCATCGTATGTTATTCCAGATATTATATTGGGTTGCAAAAAAAAAAAAAAAA] [+] EMBL AU068133 [GTTTACCAACCTTCAGATGAACTCAAAGGANCTATCGAAGCAATAAAGAACTCTGATCCTGAAGCAGATGAAGCAGTAGATGCTGATCTTGCGACTGCAATCTGCTCAATATTGCAGAGATGTGATCCCTGCGGATAAATTACTGGTCCTGGTACAGGACCACTATTTCTTCTCAAACCTGAAGCATGCAGTGGCCTCCATGAGGTCATAATGGAGATATCTTCTATCTTCGTGTGATTCTGGGCGTTGAGGTGCCTAGCTACATTTGTTATGAACTTTCCTTGGGCATAACTGATCACTGATATTACTCNAATATTGTGTTCTTGTGCATCGTATGTTATTCCAGATATTATATTGGGTTGCAAAAAAAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_13884#0 GCCGTTGAAGAAGCAACCAATGGCTGGATTAAGGTCATAGCGCTTCCAATCCTCCTCCTC 60 consensus_13884#2 ------------------------------------------------------------ consensus_13884#1 ------------------------------------------------------------ consensus_13884#0 CTTCCTCCGCTCGCCGTCTTCTCGACGACGACCCGCGGCCACCGCCGCGCCGCCCTCCTC 120 consensus_13884#2 ------------------------------------------------------------ consensus_13884#1 ------------------------------------------------------------ consensus_13884#0 GCCGCCGCCGCCGCCGCCGTCTCCGCAGAATCTGATCGATGGCGCCGTCGTCGACGTCGT 180 consensus_13884#2 ------------------------------------------------------------ consensus_13884#1 ------------------------------------------------------------ consensus_13884#0 CGGAGGGTGCCTCCGACGAGTGGTTGCCACCCAGCCGGCGGCCGGAGCTGGCGGACGTGG 240 consensus_13884#2 ------------------------------------------------------------ consensus_13884#1 ------------------------------------------------------------ consensus_13884#0 TCCCCGTGACGCAGGACGACGGGCCCCACCCCGTGGTGGCCATCGCCTACCGGGACGAGT 300 consensus_13884#2 ------------------------------------------------------------ consensus_13884#1 ------------------------------------------------------------ consensus_13884#0 TCCGCGAGGTCATGGACTACTTCCGCGCCCTCTACTTCGCCGGCGAGCGCAGCGTCCGCG 360 consensus_13884#2 ------------------------------------------------------------ consensus_13884#1 ------------------------------------------------------------ consensus_13884#0 CCCTCCACCTCACCGCCGAGGTCATCGACCTTAATCCCGGCAACTACACGGTGTGGCATT 420 consensus_13884#2 ------------------------------------------------------------ consensus_13884#1 ------------------------------------------------------------ consensus_13884#0 TTAGGCGTCTTGTTCTAGAGGCACTGGATGCTGATCTGCGTGAGGAAATGGATTTTGTGG 480 consensus_13884#2 ------------------------------------------------------------ consensus_13884#1 ------------------------------------------------------------ consensus_13884#0 ACCGAATTGCTGAATGTAACCCAAAAAATTATCAAATCTGGCATCACAAGAGATGGCTTG 540 consensus_13884#2 ------------------------------------------------------------ consensus_13884#1 ------------------------------------------------------------ consensus_13884#0 CGGAGAAATTAGGACCAGATATTGCAAATAAAGAGCACGAATTTACAAGGAAGATACTTT 600 consensus_13884#2 ------------------------------------------------------------ consensus_13884#1 ------------------------------------------------------------ consensus_13884#0 CTATGGATGCTAAAAATTACCATGCTTGGTCTCATAGGCAGTGGGTTCTTCAAGCACTGG 660 consensus_13884#2 ------------------------------------------------------------ consensus_13884#1 ------------------------------------------------------------ consensus_13884#0 GTGGATGGGAGACTGAACTACAGTATTGCAACCAGCTGCTTGAGGAAGACGTCTTCAATA 720 consensus_13884#2 ------------------------------------------------------------ consensus_13884#1 ------------------------------------------------------------ consensus_13884#0 ATTCAGCTTGGAATCAGAGATACCTTGTAATAACAAGTTCACCACTTCTTGGAGGCCTTG 780 consensus_13884#2 ------------------------------------------------------------ consensus_13884#1 ------------------------------------------------------------ consensus_13884#0 CAGCAATGCGTGACTCGGAAGTGGATTACACAGTTGGGGCTATTCTGGCTAACCCTCAGA 840 consensus_13884#2 ------------------------------------------------------------ consensus_13884#1 -------------------------------------------------------GACTC 5 consensus_13884#0 ATGAAAGCCCCTGGAGATACCTCAAAGGCCTGTACAAGGGTGAAAATAACTTGCTGATGG 900 consensus_13884#2 ------------------------------------------------------------ consensus_13884#1 CCCTTCGCCGGCGCTGTAGGGGGAAGAGAGACCTGATCCCTTCCACCGCCTACGTGGAGT 65 consensus_13884#0 CTGATGAGCGCATCTCTGATGTTTGTCTCAAGGTCCTGAAACATGATTCGACCTGCGTAT 960 consensus_13884#2 ------------------------------------------------------------ consensus_13884#1 TCCTCTACTATCCTAGGCCGGCGTGGAGTGATACGTGAGCCGTGAGCGTGGAGATCCATC 125 consensus_13884#0 TTGCTTTGAGCTTGCTGCTCGATCTTCTTCAAATTGGTTTA--C-AACCTTCAGATGAAC 1017 consensus_13884#2 ------------------------------------GTTTA--CCAACCTTCAGATGAAC 22 consensus_13884#1 CATCCCACTGCGGTTTAGGACTGCAGTTAGTGGAGGATTTGATTCGATTTTTGTGTTTTT 185 *** * ** * consensus_13884#0 TCAAAGGAACTATCGAAGCAATAAAGAACTCTGATCC-TGAAGCAGATGAAGCAGTAGAT 1076 consensus_13884#2 TCAAAGGANCTATCGAAGCAATAAAGAACTCTGATCC-TGAAGCAGATGAAGCAGTAGAT 81 consensus_13884#1 TTTGTTTGATTTCTCTGGCTGCAGCAGAATCTGATCGATGGCGCCGTCGTCGACGTCGTC 245 * * ** * * ******* ** ** * * * ** * consensus_13884#0 GCTGATCTTGCGACTGCAATCTGCTCAATATTGCAGAGATGTGATCCCCTGCGGATAAAT 1136 consensus_13884#2 GCTGATCTTGCGACTGCAATCTGCTCAATATTGCAGAGATGTGATCCC-TGCGGATAAAT 140 consensus_13884#1 GGAGG----GTGCCTCCGA-CGAGTGGTTGCCACCCAGCCGGCGGCCGGAGCTGGCGGAC 300 * * * * ** * * * * * * ** * ** ** * * consensus_13884#0 -TACTGGTCCTGGTACAGGACCACTATTTCTTCTCAAACCTGAA----GCATGCAGTGGC 1191 consensus_13884#2 -TACTGGTCCTGGTACAGGACCACTATTTCTTCTCAAACCTGAA----GCATGCAGTGGC 195 consensus_13884#1 GTGGTCCCCGTGACGCAGGACGACGGGCCCCACCCCGTGGTGGCCATCGCCTACCGGGAC 360 * * * ** ****** ** * * * ** ** * * * * * consensus_13884#0 ---CTCCATGAGGTCATAATGGAGAT----ATCTTCTATCTTCGTGTGATTCTGGGCGTT 1244 consensus_13884#2 ---CTCCATGAGGTCATAATGGAGAT----ATCTTCTATCTTCGTGTGATTCTGGGCGTT 248 consensus_13884#1 GAGTTCCGCGAGGTCATGGACTACTTCCGCGCCCTCTACTTCGCCGGCGAGCGCAGCGTC 420 *** ******** * * * **** * * * **** consensus_13884#0 GAGGTGCCTAGCTACATTT-----GTTATGAACTTTCCTTGGGCATAACTGATCACTGAT 1299 consensus_13884#2 GAGGTGCCTAGCTACATTT-----GTTATGAACTTTCCTTGGGCATAACTGATCACTGAT 303 consensus_13884#1 CGCGCCCTCCACCTCACCGCCGAGGTCATCGACCTTAATCCCG-GCAACTACACGGTGTG 479 * * * ** ** ** ** ** * * **** * ** consensus_13884#0 ATTACTCCAATATTGTGTTCTTGTG-CATCGTATGTTATACCAGATATTATATTGGGTTG 1358 consensus_13884#2 ATTACTCNAATATTGTGTTCTTGTG-CATCGTATGTTATTCCAGATATTATATTGGGTTG 362 consensus_13884#1 GCATTTTAGGCGTCTTGTTCTAGAGGCACTGGATGCTGATCTGCGTGAGGAAATGGATTC 539 * * ****** * * ** * *** * * * * *** ** consensus_13884#0 CAATTCCTTGTGATGTAAAAAAAA 1382 consensus_13884#2 CAAA-------AAAAAAAAAAAAA 379 consensus_13884#1 TGTGGAC---CGAATTGCTGAAT- 559 * ** |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||