These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13902#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 1406 fasta sequence [TTCACTAGACAGCTTAGCTAGCAGGTAGCTGAGAGAGTTCCTTCGATCTCGATCTCTGCACGGCGACGATAAGATAAGCAATGGCAGTCTCGTCGCCGGCGCCGTCGTCTCTGCATGTGCCGATGGCCGCTGCGGCACTATTAGGGATGCTGATGATGATGTCGTCGGCGCCGGAGATGAAGGTGGAGGCGGCCGGCGGGTTGT-CCGTCGGGTTCTACGCCGAATCGTGCCCCAAGGCGGAGGCGA-TCGTCCGGGAC-ACGGTGACCAAGGCGTTCGAGAAGGCGCCCGGCACGCCGGCCGACCTCATCCGCCTCTTCTTCCACGACTGCTTCGTCCGCGGATGTGACGCATCGGTGTTGCTGGAGTCGACACCAGGGAACAAGGCGGAGAGGGACAACAAGGCGAACAACCCTAGCTTGGATGGGTTTGACGTCGTCGATGATGCCAAGGACCTCCTCGAGAAGGAGTGTCCACACACCGTCTCTTGCGCCGACATCCTCTCTCTCGTGGCTCGTGATAGCGCCTACCTTGCTGGTGGGCTCGACTTCGAGATCCCAACAGGTCGTCGTGATGGCTTCGTCTCTAAGGAGGATGAGGTCCTCTCCAACGTCCCTCACCCGGAGTTCGGTGCCAAAGACCTCCTCAAAAACTTCACCGCTAAAGGTTTTACGGCGGAGGAGATGGTGACGCTGTCGGGGGCGCACTCTATCGGCACGTCTCACTGCTCATCGTTCACAAACCGGCTGTACAAGTACTACGGCACGTACGGCACGGACCCGTCGATGCCGGCGGCGTACGCGGCGGACATGAAGAGCAAGTGCCCGCCGGAGACGGCGGCGCAGCAGGACGCGACGATGGTGCAGCTCGACGACGTGACGCCGTTCAAGATGGACAACCAGTACTACAGGAACGTGCTCGCCGGGAACGTCACGTTCGCCTCCGACGTGGCCCTCCTCGACACGCCGGAGACGGCGGCGCTCGTCAGGCTCTACGCCGCCGGCGACCCCGC-AGCCTGGCTCGCCCGCTTCGCCGCCGCGCTGGTCAAGGTCAGCAAGCTCGACGTGCTCACCGGCGGCGAGGGGGAGATCAGGCTCAACTGCTCCAGGATCAACTAATTAACTCAAATTAAATTCGCGTGAAGTTTGTGATTCTCATATATACAAACACTACTGCCCTGTTGCCATGCATGCATGAGGCTCATTTGATTTATTTTTCCTTATATGTTTGTGCATGATTCAATGTACTACTACTACTACAACAACTTTTGTTTATTTTTATTTTCAGTTTCATTTTTTACCTTTTGATGCTGAGTGTGCCAATTGGGCAAAAATAAATTGTGCTTCTGACCATATATATGGGTGAATTTATTCAAGGAGTAAAATGTGTGCTATTCATGTTTTAAAAAA] [+] EMBL AK120246 [TTCACTAGACAGCTTAGCTAGCAGGTAGCTGAGAGAGTTCCTTCGATCTCGATCTCTGCACGGCGACGATAAGATAAGCAATGGCAGTCTCGTCGCCGGCGCCGTCGTCTCTGCATGTGCCGATGGCCGCTGCGGCACTATTAGGGATGCTGATGATGATGTCGTCGGCGCCGGAGATGAAGGTGGAGGCGGCCGGCGGGTTGT CCGTCGGGTTCTACGCCGAATCGTGCCCCAAGGCGGAGGCGA TCGTCCGGGAC ACGGTGACCAAGGCGTTCGAGAAGGCGCCCGGCACGCCGGCCGACCTCATCCGCCTCTTCTTCCACGACTGCTTCGTCCGCGGATGTGACGCATCGGTGTTGCTGGAGTCGACACCAGGGAACAAGGCGGAGAGGGACAACAAGGCGAACAACCCTAGCTTGGATGGGTTTGACGTCGTCGATGATGCCAAGGACCTCCTCGAGAAGGAGTGTCCACACACCGTCTCTTGCGCCGACATCCTCTCTCTCGTGGCTCGTGATAGCGCCTACCTTGCTGGTGGGCTCGACTTCGAGATCCCAACAGGTCGTCGTGATGGCTTCGTCTCTAAGGAGGATGAGGTCCTCTCCAACGTCCCTCACCCGGAGTTCGGTGCCAAAGACCTCCTCAAAAACTTCACCGCTAAAGGTTTTACGGCGGAGGAGATGGTGACGCTGTCGGGGGCGCACTCTATCGGCACGTCTCACTGCTCATCGTTCACAAACCGGCTGTACAAGTACTACGGCACGTACGGCACGGACCCGTCGATGCCGGCGGCGTACGCGGCGGACATGAAGAGCAAGTGCCCGCCGGAGACGGCGGCGCAGCAGGACGCGACGATGGTGCAGCTCGACGACGTGACGCCGTTCAAGATGGACAACCAGTACTACAGGAACGTGCTCGCCGGGAACGTCACGTTCGCCTCCGACGTGGCCCTCCTCGACACGCCGGAGACGGCGGCGCTCGTCAGGCTCTACGCCGCCGGCGACCCCGC AGCCTGGCTCGCCCGCTTCGCCGCCGCGCTGGTCAAGGTCAGCAAGCTCGACGTGCTCACCGGCGGCGAGGGGGAGATCAGGCTCAACTGCTCCAGGATCAACTAATTAACTCAAATTAAATTCGCGTGAAGTTTGTGATTCTCATATATACAAACACTACTGCCCTGTTGCCATGCATGCATGAGGCTCATTTGATTTATTTTTCCTTATATGTTTGTGCATGATTCAATGTACTACTACTACTACAACAACTTTTGTTTATTTTTATTTTCAGTTTCATTTTTTACCTTTTGATGCTGAGTGTGCCAATTGGGCAAAAATAAATTGTGCTTCTGACCATATATATGGGTGAATTTATTCAAGGAGTAAAATG ] [+] EMBL AK104300 [ TCACTAGACAGCTTAGCTAGCAGGTAGCTGAGAGAGTTCCTTCGATCTCGATCTCTGCACGGCGACGATAAGATAAGCAATGGCAGTCTCGTCGCCGGCGCCGTCGTCTCTGCATGTGCCGATGGCCGCTGCGGCACTATTAGGGATGCTGATGATGATGTCGTCGGCGCCGGAGATGAAGGTGGAGGCGGCCGGCGGGTTGT CCGTCGGGTTCTACGCCGAATCGTGCCCCAAGGCGGAGGCGA TCGTCCGGGAC ACGGTGACCAAGGCGTTCGAGAAGGCGCCCGGCACGCCGGCCGACCTCATCCGCCTCTTCTTCCACGACTGCTTCGTCCGCGGATGTGACGCATCGGTGTTGCTGGAGTCGACACCAGGGAACAAGGCGGAGAGGGACAACAAGGCGAACAACCCTAGCTTGGATGGGTTTGACGTCGTCGATGATGCCAAGGACCTCCTCGAGAAGGAGTGTCCACACACCGTCTCTTGCGCCGACATCCTCTCTCTCGTGGCTCGTGATAGCGCCTACCTTGCTGGTGGGCTCGACTTCGAGATCCCAACAGGTCGTCGTGATGGCTTCGTCTCTAAGGAGGATGAGGTCCTCTCCAACGTCCCTCACCCGGAGTTCGGTGCCAAAGACCTCCTCAAAAACTTCACCGCTAAAGGTTTTACGGCGGAGGAGATGGTGACGCTGTCGGGGGCGCACTCTATCGGCACGTCTCACTGCTCATCGTTCACAAACCGGCTGTACAAGTACTACGGCACGTACGGCACGGACCCGTCGATGCCGGCGGCGTACGCGGCGGACATGAAGAGCAAGTGCCCGCCGGAGACGGCGGCGCAGCAGGACGCGACGATGGTGCAGCTCGACGACGTGACGCCGTTCAAGATGGACAACCAGTACTACAGGAACGTGCTCGCCGGGAACGTCACGTTCGCCTCCGACGTGGCCCTCCTCGACACGCCGGAGACGGCGGCGCTCGTCAGGCTCTACGCCGCCGGCGACCCCGC AGCCTGGCTCGCCCGCTTCGCCGCCGCGCTGGTCAAGGTCAGCAAGCTCGACGTGCTCACCGGCGGCGAGGGGGAGATCAGGCTCAACTGCTCCAGGATCAACTAATTAACTCAAATTAAATTCGCGTGAAGTTTGTGATTCTCATATATACAAACACTACTGCCCTGTTGCCATGCATGCATGAGGCTCATTTGATTTATTTTTCCTTATATGTTTGTGCATGATTCAATGTACTACTACTACTACAACAACTTTTGTTTATTTTTATTTTCAGTTTCATTTTTTACCTTTTGATGCTGAGTGTGCCAATTGGGCAAAAATAAATTGTGCTTCTGACCATATATATGGGTGAATTTATTCAAGGAGTAAAATGTGTGCTA ] [+] EMBL AK060998 [ TCACTAGACAGCTTAGCTAGCAGGTAGCTGAGAGAGTTCCTTCGATCTCGATCTCTGCACGGCGACGATAAGATAAGCAATGGCAGTCTCGTCGCCGGCGCCGTCGTCTCTGCATGTGCCGATGGCCGCTGCGGCACTATTAGGGATGCTGATGATGATGTCGTCGGCGCCGGAGATGAAGGTGGAGGCGGCCGGCGGGTTGT CCGTCGGGTTCTACGCCGAATCGTGCCCCAAGGCGGAGGCGA TCGTCCGGGAC ACGGTGACCAAGGCGTTCGAGAAGGCGCCCGGCACGCCGGCCGACCTCATCCGCCTCTTCTTCCACGACTGCTTCGTCCGCGGATGTGACGCATCGGTGTTGCTGGAGTCGACACCAGGGAACAAGGCGGAGAGGGACAACAAGGCGAACAACCCTAGCTTGGATGGGTTTGACGTCGTCGATGATGCCAAGGACCTCCTCGAGAAGGAGTGTCCACACACCGTCTCTTGCGCCGACATCCTCTCTCTCGTGGCTCGTGATAGCGCCTACCTTGCTGGTGGGCTCGACTTCGAGATCCCAACAGGTCGTCGTGATGGCTTCGTCTCTAAGGAGGATGAGGTCCTCTCCAACGTCCCTCACCCGGAGTTCGGTGCCAAAGACCTCCTCAAAAACTTCACCGCTAAAGGTTTTACGGCGGAGGAGATGGTGACGCTGTCGGGGGCGCACTCTATCGGCACGTCTCACTGCTCATCGTTCACAAACCGGCTGTACAAGTACTACGGCACGTACGGCACGGACCCGTCGATGCCGGCGGCGTACGCGGCGGACATGAAGAGCAAGTGCCCGCCGGAGACGGCGGCGCAGCAGGACGCGACGATGGTGCAGCTCGACGACGTGACGCCGTTCAAGATGGACAACCAGTACTACAGGAACGTGCTCGCCGGGAACGTCACGTTCGCCTCCGACGTGGCCCTCCTCGACACGCCGGAGACGGCGGCGCTCGTCAGGCTCTACGCCGCCGGCGACCCCGC AGCCTGGCTCGCCCGCTTCGCCGCCGCGCTGGTCAAGGTCAGCAAGCTCGACGTGCTCACCGGCGGCGAGGGGGAGATCAGGCTCAACTGCTCCAGGATCAACTAATTAACTCAAATTAAATTCGCGTGAAGTTTGTGATTCTCATATATACAAACACTACTGCCCTGTTGCCATGCATGCATGAGGCTCATTTGATTTATTTTTCCTTATATGTTTGTGCATGATTCAATGTACTACTACTACTACAACAACTTTTGTTTATTTTTATTTTCAGTTTCATTTTTTACCTTTTGATGCTGAGTGTGCCAATTGGGCAAAAATAAATTGTGCTTCTGACCATATATATGGGTGAATTTATTCAAGGAGTAAAATGTGTGCTA ] [+] EMBL AK061553 [ TCACTAGACAGCTTAGCTAGCAGGTAGCTGAGAGAGTTCCTTCGATCTCGATCTCTGCACGGCGACGATAAGATAAGCAATGGCAGTCTCGTCGCCGGCGCCGTCGTCTCTGCATGTGCCGATGGCCGCTGCGGCACTATTAGGGATGCTGATGATGATGTCGTCGGCGCCGGAGATGAAGGTGGAGGCGGCCGGCGGGTTGT CCGTCGGGTTCTACGCCGAATCGTGCCCCAAGGCGGAGGCGA TCGTCCGGGAC ACGGTGACCAAGGCGTTCGAGAAGGCGCCCGGCACGCCGGCCGACCTCATCCGCCTCTTCTTCCACGACTGCTTCGTCCGCGGATGTGACGCATCGGTGTTGCTGGAGTCGACACCAGGGAACAAGGCGGAGAGGGACAACAAGGCGAACAACCCTAGCTTGGATGGGTTTGACGTCGTCGATGATGCCAAGGACCTCCTCGAGAAGGAGTGTCCACACACCGTCTCTTGCGCCGACATCCTCTCTCTCGTGGCTCGTGATAGCGCCTACCTTGCTGGTGGGCTCGACTTCGAGATCCCAACAGGTCGTCGTGATGGCTTCGTCTCTAAGGAGGATGAGGTCCTCTCCAACGTCCCTCACCCGGAGTTCGGTGCCAAAGACCTCCTCAAAAACTTCACCGCTAAAGGTTTTACGGCGGAGGAGATGGTGACGCTGTCGGGGGCGCACTCTATCGGCACGTCTCACTGCTCATCGTTCACAAACCGGCTGTACAAGTACTACGGCACGTACGGCACGGACCCGTCGATGCCGGCGGCGTACGCGGCGGACATGAAGAGCAAGTGCCCGCCGGAGACGGCGGCGCAGCAGGACGCGACGATGGTGCAGCTCGACGACGTGACGCCGTTCAAGATGGACAACCAGTACTACAGGAACGTGCTCGCCGGGAACGTCACGTTCGCCTCCGACGTGGCCCTCCTCGACACGCCGGAGACGGCGGCGCTCGTCAGGCTCTACGCCGCCGGCGACCCCGC AGCCTGGCTCGCCCGCTTCGCCGCCGCGCTGGTCAAGGTCAGCAAGCTCGACGTGCTCACCGGCGGCGAGGGGGAGATCAGGCTCAACTGCTCCAGGATCAACTAATTAACTCAAATTAAATTCGCGTGAAGTTTGTGATTCTCATATATACAAACACTACTGCCCTGTTGCCATGCATGCATGAGGCTCATTTGATTT ] [+] EMBL AK104219 [ ACTAGACAGCTTAGCTAGCAGGTAGCTGAGAGAGTTCCTTCGATCTCGATCTCTGCACGGCGACGATAAGATAAGCAATGGCAGTCTCGTCGCCGGCGCCGTCGTCTCTGCATGTGCCGATGGCCGCTGCGGCACTATTAGGGATGCTGATGATGATGTCGTCGGCGCCGGAGATGAAGGTGGAGGCGGCCGGCGGGTTGT CCGTCGGGTTCTACGCCGAATCGTGCCCCAAGGCGGAGGCGA TCGTCCGGGAC ACGGTGACCAAGGCGTTCGAGAAGGCGCCCGGCACGCCGGCCGACCTCATCCGCCTCTTCTTCCACGACTGCTTCGTCCGCGGATGTGACGCATCGGTGTTGCTGGAGTCGACACCAGGGAACAAGGCGGAGAGGGACAACAAGGCGAACAACCCTAGCTTGGATGGGTTTGACGTCGTCGATGATGCCAAGGACCTCCTCGAGAAGGAGTGTCCACACACCGTCTCTTGCGCCGACATCCTCTCTCTCGTGGCTCGTGATAGCGCCTACCTTGCTGGTGGGCTCGACTTCGAGATCCCAACAGGTCGTCGTGATGGCTTCGTCTCTAAGGAGGATGAGGTCCTCTCCAACGTCCCTCACCCGGAGTTCGGTGCCAAAGACCTCCTCAAAAACTTCACCGCTAAAGGTTTTACGGCGGAGGAGATGGTGACGCTGTCGGGGGCGCACTCTATCGGCACGTCTCACTGCTCATCGTTCACAAACCGGCTGTACAAGTACTACGGCACGTACGGCACGGACCCGTCGATGCCGGCGGCGTACGCGGCGGACATGAAGAGCAAGTGCCCGCCGGAGACGGCGGCGCAGCAGGACGCGACGATGGTGCAGCTCGACGACGTGACGCCGTTCAAGATGGACAACCAGTACTACAGGAACGTGCTCGCCGGGAACGTCACGTTCGCCTCCGACGTGGCCCTCCTCGACACGCCGGAGACGGCGGCGCTCGTCAGGCTCTACGCCGCCGGCGACCCCGC AGCCTGGCTCGCCCGCTTCGCCGCCGCGCTGGTCAAGGTCAGCAAGCTCGACGTGCTCACCGGCGGCGAGGGGGAGATCAGGCTCAACTGCTCCAGGATCAACTAATTAACTCAAATTAAATTCGCGTGAAGTTTGTGATTCTCATATATACAAACACTACTGCCCTGTTGCCATGCATGCATGAGGCTCATTTGATTTATTTTTCCTTATATGTTTGTGCATGATTCAATGTACTACTACTACTACAACAACTTTTGTTTATTTTTATTTTCAGTTTCATTTTTTACCTTTTGATGCTGAGTGTGCCAATTGGGCAAAAATAAATTGTGCTTCTGACCATATATATGGGTGAATTTATTCAAGGAGTAAAATGTGTGCT ] [+] EMBL AK106200 [ ACTAGACAGCTTAGCTAGCAGGTAGCTGAGAGAGTTCCTTCGATCTCGATCTCTGCACGGCGACGATAAGATAAGCAATGGCAGTCTCGTCGCCGGCGCCGTCGTCTCTGCATGTGCCGATGGCCGCTGCGGCACTATTAGGGATGCTGATGATGATGTCGTCGGCGCCGGAGATGAAGGTGGAGGCGGCCGGCGGGTTGT CCGTCGGGTTCTACGCCGAATCGTGCCCCAAGGCGGAGGCGA TCGTCCGGGAC ACGGTGACCAAGGCGTTCGAGAAGGCGCCCGGCACGCCGGCCGACCTCATCCGCCTCTTCTTCCACGACTGCTTCGTCCGCGGATGTGACGCATCGGTGTTGCTGGAGTCGACACCAGGGAACAAGGCGGAGAGGGACAACAAGGCGAACAACCCTAGCTTGGATGGGTTTGACGTCGTCGATGATGCCAAGGACCTCCTCGAGAAGGAGTGTCCACACACCGTCTCTTGCGCCGACATCCTCTCTCTCGTGGCTCGTGATAGCGCCTACCTTGCTGGTGGGCTCGACTTCGAGATCCCAACAGGTCGTCGTGATGGCTTCGTCTCTAAGGAGGATGAGGTCCTCTCCAACGTCCCTCACCCGGAGTTCGGTGCCAAAGACCTCCTCAAAAACTTCACCGCTAAAGGTTTTACGGCGGAGGAGATGGTGACGCTGTCGGGGGCGCACTCTATCGGCACGTCTCACTGCTCATCGTTCACAAACCGGCTGTACAAGTACTACGGCACGTACGGCACGGACCCGTCGATGCCGGCGGCGTACGCGGCGGACATGAAGAGCAAGTGCCCGCCGGAGACGGCGGCGCAGCAGGACGCGACGATGGTGCAGCTCGACGACGTGACGCCGTTCAAGATGGACAACCAGTACTACAGGAACGTGCTCGCCGGGAACGTCACGTTCGCCTCCGACGTGGCCCTCCTCGACACGCCGGAGACGGCGGCGCTCGTCAGGCTCTACGCCGCCGGCGACCCCGC AGCCTGGCTCGCCCGCTTCGCCGCCGCGCTGGTCAAGGTCAGCAAGCTCGACGTGCTCACCGGCGGCGAGGGGGAGATCAGGCTCAACTGCTCCAGGATCAACTAATTAACTCAAATTAAATTCGCGTGAAGTTTGTGATTCTCATATATACAAACACTACTGCCCTGTTGCCATGCATGCATGAGGCTCATTTGATTTATTTTTCCTTATATGTTTGTGCATGATTCAATGTACTACTACTACTACAACAACTTTTGTTTATTTTTATTTTCAGTTTCATTTTTTACCTTTTGATGCTGAGTGTGCCAATTGGGCAAAAATAAATTGTGCTTCTGACCATATATATGGGTGAATTTA ] [+] EMBL AK104641 [ CTTAGCTAGCAGGTAGCTGAGAGAGTTCCTTCGATCTCGATCTCTGCACGGCGACGATAAGATAAGCAATGGCAGTCTCGTCGCCGGCGCCGTCGTCTCTGCATGTGCCGATGGCCGCTGCGGCACTATTAGGGATGCTGATGATGATGTCGTCGGCGCCGGAGATGAAGGTGGAGGCGGCCGGCGGGTTGT CCGTCGGGTTCTACGCCGAATCGTGCCCCAAGGCGGAGGCGA TCGTCCGGGAC ACGGTGACCAAGGCGTTCGAGAAGGCGCCCGGCACGCCGGCCGACCTCATCCGCCTCTTCTTCCACGACTGCTTCGTCCGCGGATGTGACGCATCGGTGTTGCTGGAGTCGACACCAGGGAACAAGGCGGAGAGGGACAACAAGGCGAACAACCCTAGCTTGGATGGGTTTGACGTCGTCGATGATGCCAAGGACCTCCTCGAGAAGGAGTGTCCACACACCGTCTCTTGCGCCGACATCCTCTCTCTCGTGGCTCGTGATAGCGCCTACCTTGCTGGTGGGCTCGACTTCGAGATCCCAACAGGTCGTCGTGATGGCTTCGTCTCTAAGGAGGATGAGGTCCTCTCCAACGTCCCTCACCCGGAGTTCGGTGCCAAAGACCTCCTCAAAAACTTCACCGCTAAAGGTTTTACGGCGGAGGAGATGGTGACGCTGTCGGGGGCGCACTCTATCGGCACGTCTCACTGCTCATCGTTCACAAACCGGCTGTACAAGTACTACGGCACGTACGGCACGGACCCGTCGATGCCGGCGGCGTACGCGGCGGACATGAAGAGCAAGTGCCCGCCGGAGACGGCGGCGCAGCAGGACGCGACGATGGTGCAGCTCGACGACGTGACGCCGTTCAAGATGGACAACCAGTACTACAGGAACGTGCTCGCCGGGAACGTCACGTTCGCCTCCGACGTGGCCCTCCTCGACACGCCGGAGACGGCGGCGCTCGTCAGGCTCTACGCCGCCGGCGACCCCGC AGCCTGGCTCGCCCGCTTCGCCGCCGCGCTGGTCAAGGTCAGCAAGCTCGACGTGCTCACCGGCGGCGAGGGGGAGATCAGGCTCAACTGCTCCAGGATCAACTAATTAACTCAAATTAAATTCGCGTGAAGTTTGTGATTCTCATATATACAAACACTACTGCCCTGTTGCCATGCATGCATGAGGCTCATTTGATTTATTTTTCCTTATATGTTTGTGCATGATTCAATGTACTACTACTACTACAACAACTTTTGTTTATTTTTATTTTCAGT ] [+] EMBL CF303184 [ TTAGCTAGCAGGTAGCTGAGAGAGTTCCTTCGATCTCGATCTCTGCACGGCGACGATAAGATAAGCAATGGCAGTCTCGTCGCCGGCGCCGTCGTCTCTGCATGTGCCGATGGCCGCTGCGGCACTATTAGGGATGCTGATGATGATGTCGTCGGCGCCGGAGATGAAGGTGGAGGCGGCCGGCGGGTTGT CCGTCGGGTTCTACGCCGAATCGTGCCCCAAGGCGGAGGCGA TCGTCCGGGAC ACGGTGACCAAGGCGTTCGAGAAGGCGCCCGGCACGCCGGCCGACCTCATCCGCCTCTTCTTCCACGACTGCTTCGTCCGCGGATGTGACGCATCGGTGTTGCTGGAGTCGACACCAGGGAACAAGGCGGAGAGGGACAACAAGGCGAACAACCCTAGCTTGGATGGGTTTGACGTCGTCGATGATGCCAAGGACCTCCTCGAGAAGGAGTGTCCACACACCGTCTCCTGCGCCGACATCCTCTCTCTCGTGGCTCGTGATAGCGCCTACCTTGCTGGTGGGCTCGACTTCGAGATCCCAACAGGTCGTCGTGATGGATTCGTCTCTAAGGAGGATGAGGTCCTCTCCAACGTCCCTCAC ] [+] EMBL OSS3046A [ GCTAGCAGGTAGCTGAGAGAGTTCCTTCGATCTCGATCTCTGCACGGCGACGATAAGATAAGCAATGGCAGTCTCGTCGCCGGCGCCGTCGTCTCTGCATGTGCCGATGGCCGCTGCGGCACTATTAGGGATGCTGATGATGATGTCGTCGGCGCCGGAGATGAAGGTGGAGGCGGCCGGCGGGTTGTNCCGTCGGGTTCTACGCCGAATCGTGCCCAAAGGCGGAGGCGATTCGTCCCGGACAAGGGTGACCAA ] [+] EMBL AU184492 [ GTCGTCGGCGCCGGAGATGAAGGTGGAGGCGGCCGGCGGGTTGT CCGTCGGGTTCTACGCCGAATCGTGCCCCAAGGCGGAGGCGA TCGTCCGGGAC ACGGTGACCAAGGCGTTCGAGAAGGCGCCCGGCACGCCGGCCGACCTCATCCGCCTCTTCTTCCACGACTGCTTCGTCCGCGGATGTGACGCATCGGTGTTGCTGGAGTCGACACCAGGGAACAAGGCGGAGAGGGACAACAAGGCGAACAACCCTAGCTTGGATGGGTTTGACGTCGTCGATGATGCCAAGGACCTCCTCGAGAAGGAGTGTCCACACACCGTCTCTTGCGCCGACATCCTCTCTCTCGTGGCTCGTGATAGCGCCTACCTTGCTGGTGGGCTCGACTTCGAGATCCCAACAGGTCGTCGTGATGGCTTCGTCTCTAAGGAGGATG ] [+] EMBL AU174279 [ GGCGGCGCTCGTCAGGCTTTACGCCGCCGGCGACCCCGC AGCCTGGCTCGCCCGCTTCGCCGCCGCGCTGGTCAAGGTCAGCAAGCTCGACGTGCTCACCGGCGGCGAGGGGGAGATCAGGCTCAACTGCTCCAGGATCAACTAATTAACTCAAATTAAATTCGCGTGAAGTTTGTGATTCTCATATATACAAACACTACTGCCCTGTTGCCATGCATGCATGAGGCTCATTTGATTTATTTTTCCTTATATGTTTGTGCATGATTCAATGTACTACTACTACTACAACAACTTTTGTTTATTTTTATTTTCAGTTTCATTTTTTACCTTTTGATGCTGAGTGTGCCAATTGGGCAAAAATAAATTGTGCTTCTGACCATATATATGGGTGAATTTATTCAAGGAGTAAAATGTGTGCTATTCATGTTTTAAAAAA] [+] EMBL AU184493 [ GCGCTCGTCAGGCTTTACGCCGCCGGCGACCCCGCAAGCCTGGCTCGCCCGCTTCGCCGCCGCGCTGGTCAAGGTCAGCAAGCTCGACGTGCTCACCGGCGGCGAGGGGGAGATCAGGCTCAACTGCTCCAGGATCAACTAATTAACTCAAATTAAATTCGCGTGAAGTTTGTGATTCTCATATATACAAACACTACTGCCCTGTTGCCATGCATGCATGAGGCTCATTTGATTTATTTTTCCTTATATGTTTGTGCATGATTCAATGTACTACTACTACTACAACAACTTTTGTTTATTTTTATTTTCAGTTTCATTTTTTACCTTTTGATGCTGAGTGTGCCAATTGGGCAAAAATAAATTGTGCTTCTGACCATATATATGGGTGAATTTATTCAAGGAGTAAAATGTGTGCTATTCATGTTTTAAAAA ] consensusID : consensus_13902#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 406 fasta sequence [CGACCCCGCAGCCTGGCTCGCCCGCTTCGCCGCCGCGCTGGTCAAGGTCAGCAAGCTCGACGTGCTCACCGGCGGCGAGGGGGAGATCAGGCTCAACTGCTCCAGGATCAACTAATTAACTCAAATTAAATTCGCGTGAAGTTTGTGATTCTCATATATACAAACACTACTGCCCTGTTGCCATGCATGCATGAGGCTCATTTGATTTATTTTTCTTTATATGTTTGTGCATGATTCAATGTACTACTACTACAACAACAACTTTTGTTTATTTTTATTTTCAGTTTCATTTTTTACCTTTTGATGCTGAGTGTGCCAATTGGGCAAAAATAAATTGTGCTTCTGACCATATTTATGGGTGAATTTATTCAAGGAGTAAAAAAAAAAAAAAAAAAAAAAAAAACTC] [-] EMBL CF325941 [CGACCCCGCAGCCTGGCTCGCCCGCTTCGCCGCCGCGCTGGTCAAGGTCAGCAAGCTCGACGTGCTCACCGGCGGCGAGGGGGAGATCAGGCTCAACTGCTCCAGGATCAACTAATTAACTCAAATTAAATTCGCGTGAAGTTTGTGATTCTCATATATACAAACACTACTGCCCTGTTGCCATGCATGCATGAGGCTCATTTGATTTATTTTTCTTTATATGTTTGTGCATGATTCAATGTACTACTACTACAACAACAACTTTTGTTTATTTTTATTTTCAGTTTCATTTTTTACCTTTTGATGCTGAGTGTGCCAATTGGGCAAAAATAAATTGTGCTTCTGACCATATTTATGGGTGAATTTATTCAAGGAGTAAAAAAAAAAAAAAAAAAAAAAAAAACTC] [-] EMBL CF326284 [ GCAGCCTGGCTCGCCCGCTTCGCCGCCGCGCTGGTCAAGGTCAGCAAGCTCGACGTGCTCACCGGCGGCGAGGGGGAGATCAGGCTCAACTGCTCCAGGATCAACTAATTAACTCAAATTAAATTCGCGTGAAGTTTGTGATTCTCATATATACAAACACTACTGCCCTGTTGCCATGCATGCATGAGGCTCATTTGATTTATTTTTCTTTATATGTTTGTGCATGATTCAATGTACTACTACTACAACAACAACTTTTGTTTAaaaaaaaa ] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_13902#0 TTCACTAGACAGCTTAGCTAGCAGGTAGCTGAGAGAGTTCCTTCGATCTCGATCTCTGCA 60 consensus_13902#1 ------------------------------------------------------------ consensus_13902#0 CGGCGACGATAAGATAAGCAATGGCAGTCTCGTCGCCGGCGCCGTCGTCTCTGCATGTGC 120 consensus_13902#1 ------------------------------------------------------------ consensus_13902#0 CGATGGCCGCTGCGGCACTATTAGGGATGCTGATGATGATGTCGTCGGCGCCGGAGATGA 180 consensus_13902#1 ------------------------------------------------------------ consensus_13902#0 AGGTGGAGGCGGCCGGCGGGTTGTCCGTCGGGTTCTACGCCGAATCGTGCCCCAAGGCGG 240 consensus_13902#1 ------------------------------------------------------------ consensus_13902#0 AGGCGATCGTCCGGGACACGGTGACCAAGGCGTTCGAGAAGGCGCCCGGCACGCCGGCCG 300 consensus_13902#1 ------------------------------------------------------------ consensus_13902#0 ACCTCATCCGCCTCTTCTTCCACGACTGCTTCGTCCGCGGATGTGACGCATCGGTGTTGC 360 consensus_13902#1 ------------------------------------------------------------ consensus_13902#0 TGGAGTCGACACCAGGGAACAAGGCGGAGAGGGACAACAAGGCGAACAACCCTAGCTTGG 420 consensus_13902#1 ------------------------------------------------------------ consensus_13902#0 ATGGGTTTGACGTCGTCGATGATGCCAAGGACCTCCTCGAGAAGGAGTGTCCACACACCG 480 consensus_13902#1 ------------------------------------------------------------ consensus_13902#0 TCTCTTGCGCCGACATCCTCTCTCTCGTGGCTCGTGATAGCGCCTACCTTGCTGGTGGGC 540 consensus_13902#1 ------------------------------------------------------------ consensus_13902#0 TCGACTTCGAGATCCCAACAGGTCGTCGTGATGGCTTCGTCTCTAAGGAGGATGAGGTCC 600 consensus_13902#1 ------------------------------------------------------------ consensus_13902#0 TCTCCAACGTCCCTCACCCGGAGTTCGGTGCCAAAGACCTCCTCAAAAACTTCACCGCTA 660 consensus_13902#1 ------------------------------------------------------------ consensus_13902#0 AAGGTTTTACGGCGGAGGAGATGGTGACGCTGTCGGGGGCGCACTCTATCGGCACGTCTC 720 consensus_13902#1 ------------------------------------------------------------ consensus_13902#0 ACTGCTCATCGTTCACAAACCGGCTGTACAAGTACTACGGCACGTACGGCACGGACCCGT 780 consensus_13902#1 ------------------------------------------------------------ consensus_13902#0 CGATGCCGGCGGCGTACGCGGCGGACATGAAGAGCAAGTGCCCGCCGGAGACGGCGGCGC 840 consensus_13902#1 ------------------------------------------------------------ consensus_13902#0 AGCAGGACGCGACGATGGTGCAGCTCGACGACGTGACGCCGTTCAAGATGGACAACCAGT 900 consensus_13902#1 ------------------------------------------------------------ consensus_13902#0 ACTACAGGAACGTGCTCGCCGGGAACGTCACGTTCGCCTCCGACGTGGCCCTCCTCGACA 960 consensus_13902#1 ------------------------------------------------------------ consensus_13902#0 CGCCGGAGACGGCGGCGCTCGTCAGGCTCTACGCCGCCGGCGACCCCGCAGCCTGGCTCG 1020 consensus_13902#1 ----------------------------------------CGACCCCGCAGCCTGGCTCG 20 ******************** consensus_13902#0 CCCGCTTCGCCGCCGCGCTGGTCAAGGTCAGCAAGCTCGACGTGCTCACCGGCGGCGAGG 1080 consensus_13902#1 CCCGCTTCGCCGCCGCGCTGGTCAAGGTCAGCAAGCTCGACGTGCTCACCGGCGGCGAGG 80 ************************************************************ consensus_13902#0 GGGAGATCAGGCTCAACTGCTCCAGGATCAACTAATTAACTCAAATTAAATTCGCGTGAA 1140 consensus_13902#1 GGGAGATCAGGCTCAACTGCTCCAGGATCAACTAATTAACTCAAATTAAATTCGCGTGAA 140 ************************************************************ consensus_13902#0 GTTTGTGATTCTCATATATACAAACACTACTGCCCTGTTGCCATGCATGCATGAGGCTCA 1200 consensus_13902#1 GTTTGTGATTCTCATATATACAAACACTACTGCCCTGTTGCCATGCATGCATGAGGCTCA 200 ************************************************************ consensus_13902#0 TTTGATTTATTTTTCCTTATATGTTTGTGCATGATTCAATGTACTACTACTACTACAACA 1260 consensus_13902#1 TTTGATTTATTTTTCTTTATATGTTTGTGCATGATTCAATGTACTACTACTACAACAACA 260 *************** ************************************* ****** consensus_13902#0 ACTTTTGTTTATTTTTATTTTCAGTTTCATTTTTTACCTTTTGATGCTGAGTGTGCCAAT 1320 consensus_13902#1 ACTTTTGTTTATTTTTATTTTCAGTTTCATTTTTTACCTTTTGATGCTGAGTGTGCCAAT 320 ************************************************************ consensus_13902#0 TGGGCAAAAATAAATTGTGCTTCTGACCATATATATGGGTGAATTTATTCAAGGAGTAAA 1380 consensus_13902#1 TGGGCAAAAATAAATTGTGCTTCTGACCATATTTATGGGTGAATTTATTCAAGGAGTAAA 380 ******************************** *************************** consensus_13902#0 ATGTGTGCTATTCATGTTTTAAAAAA--- 1406 consensus_13902#1 AAAAAAAAAA---AAAAAAAAAAAAACTC 406 * * * ****** |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||