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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13902#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 1406 fasta sequence
[TTCACTAGACAGCTTAGCTAGCAGGTAGCTGAGAGAGTTCCTTCGATCTCGATCTCTGCACGGCGACGATAAGATAAGCAATGGCAGTCTCGTCGCCGGCGCCGTCGTCTCTGCATGTGCCGATGGCCGCTGCGGCACTATTAGGGATGCTGATGATGATGTCGTCGGCGCCGGAGATGAAGGTGGAGGCGGCCGGCGGGTTGT-CCGTCGGGTTCTACGCCGAATCGTGCCCCAAGGCGGAGGCGA-TCGTCCGGGAC-ACGGTGACCAAGGCGTTCGAGAAGGCGCCCGGCACGCCGGCCGACCTCATCCGCCTCTTCTTCCACGACTGCTTCGTCCGCGGATGTGACGCATCGGTGTTGCTGGAGTCGACACCAGGGAACAAGGCGGAGAGGGACAACAAGGCGAACAACCCTAGCTTGGATGGGTTTGACGTCGTCGATGATGCCAAGGACCTCCTCGAGAAGGAGTGTCCACACACCGTCTCTTGCGCCGACATCCTCTCTCTCGTGGCTCGTGATAGCGCCTACCTTGCTGGTGGGCTCGACTTCGAGATCCCAACAGGTCGTCGTGATGGCTTCGTCTCTAAGGAGGATGAGGTCCTCTCCAACGTCCCTCACCCGGAGTTCGGTGCCAAAGACCTCCTCAAAAACTTCACCGCTAAAGGTTTTACGGCGGAGGAGATGGTGACGCTGTCGGGGGCGCACTCTATCGGCACGTCTCACTGCTCATCGTTCACAAACCGGCTGTACAAGTACTACGGCACGTACGGCACGGACCCGTCGATGCCGGCGGCGTACGCGGCGGACATGAAGAGCAAGTGCCCGCCGGAGACGGCGGCGCAGCAGGACGCGACGATGGTGCAGCTCGACGACGTGACGCCGTTCAAGATGGACAACCAGTACTACAGGAACGTGCTCGCCGGGAACGTCACGTTCGCCTCCGACGTGGCCCTCCTCGACACGCCGGAGACGGCGGCGCTCGTCAGGCTCTACGCCGCCGGCGACCCCGC-AGCCTGGCTCGCCCGCTTCGCCGCCGCGCTGGTCAAGGTCAGCAAGCTCGACGTGCTCACCGGCGGCGAGGGGGAGATCAGGCTCAACTGCTCCAGGATCAACTAATTAACTCAAATTAAATTCGCGTGAAGTTTGTGATTCTCATATATACAAACACTACTGCCCTGTTGCCATGCATGCATGAGGCTCATTTGATTTATTTTTCCTTATATGTTTGTGCATGATTCAATGTACTACTACTACTACAACAACTTTTGTTTATTTTTATTTTCAGTTTCATTTTTTACCTTTTGATGCTGAGTGTGCCAATTGGGCAAAAATAAATTGTGCTTCTGACCATATATATGGGTGAATTTATTCAAGGAGTAAAATGTGTGCTATTCATGTTTTAAAAAA]
[+] EMBL AK120246 [TTCACTAGACAGCTTAGCTAGCAGGTAGCTGAGAGAGTTCCTTCGATCTCGATCTCTGCACGGCGACGATAAGATAAGCAATGGCAGTCTCGTCGCCGGCGCCGTCGTCTCTGCATGTGCCGATGGCCGCTGCGGCACTATTAGGGATGCTGATGATGATGTCGTCGGCGCCGGAGATGAAGGTGGAGGCGGCCGGCGGGTTGT CCGTCGGGTTCTACGCCGAATCGTGCCCCAAGGCGGAGGCGA TCGTCCGGGAC ACGGTGACCAAGGCGTTCGAGAAGGCGCCCGGCACGCCGGCCGACCTCATCCGCCTCTTCTTCCACGACTGCTTCGTCCGCGGATGTGACGCATCGGTGTTGCTGGAGTCGACACCAGGGAACAAGGCGGAGAGGGACAACAAGGCGAACAACCCTAGCTTGGATGGGTTTGACGTCGTCGATGATGCCAAGGACCTCCTCGAGAAGGAGTGTCCACACACCGTCTCTTGCGCCGACATCCTCTCTCTCGTGGCTCGTGATAGCGCCTACCTTGCTGGTGGGCTCGACTTCGAGATCCCAACAGGTCGTCGTGATGGCTTCGTCTCTAAGGAGGATGAGGTCCTCTCCAACGTCCCTCACCCGGAGTTCGGTGCCAAAGACCTCCTCAAAAACTTCACCGCTAAAGGTTTTACGGCGGAGGAGATGGTGACGCTGTCGGGGGCGCACTCTATCGGCACGTCTCACTGCTCATCGTTCACAAACCGGCTGTACAAGTACTACGGCACGTACGGCACGGACCCGTCGATGCCGGCGGCGTACGCGGCGGACATGAAGAGCAAGTGCCCGCCGGAGACGGCGGCGCAGCAGGACGCGACGATGGTGCAGCTCGACGACGTGACGCCGTTCAAGATGGACAACCAGTACTACAGGAACGTGCTCGCCGGGAACGTCACGTTCGCCTCCGACGTGGCCCTCCTCGACACGCCGGAGACGGCGGCGCTCGTCAGGCTCTACGCCGCCGGCGACCCCGC AGCCTGGCTCGCCCGCTTCGCCGCCGCGCTGGTCAAGGTCAGCAAGCTCGACGTGCTCACCGGCGGCGAGGGGGAGATCAGGCTCAACTGCTCCAGGATCAACTAATTAACTCAAATTAAATTCGCGTGAAGTTTGTGATTCTCATATATACAAACACTACTGCCCTGTTGCCATGCATGCATGAGGCTCATTTGATTTATTTTTCCTTATATGTTTGTGCATGATTCAATGTACTACTACTACTACAACAACTTTTGTTTATTTTTATTTTCAGTTTCATTTTTTACCTTTTGATGCTGAGTGTGCCAATTGGGCAAAAATAAATTGTGCTTCTGACCATATATATGGGTGAATTTATTCAAGGAGTAAAATG ]
[+] EMBL AK104300 [ TCACTAGACAGCTTAGCTAGCAGGTAGCTGAGAGAGTTCCTTCGATCTCGATCTCTGCACGGCGACGATAAGATAAGCAATGGCAGTCTCGTCGCCGGCGCCGTCGTCTCTGCATGTGCCGATGGCCGCTGCGGCACTATTAGGGATGCTGATGATGATGTCGTCGGCGCCGGAGATGAAGGTGGAGGCGGCCGGCGGGTTGT CCGTCGGGTTCTACGCCGAATCGTGCCCCAAGGCGGAGGCGA TCGTCCGGGAC ACGGTGACCAAGGCGTTCGAGAAGGCGCCCGGCACGCCGGCCGACCTCATCCGCCTCTTCTTCCACGACTGCTTCGTCCGCGGATGTGACGCATCGGTGTTGCTGGAGTCGACACCAGGGAACAAGGCGGAGAGGGACAACAAGGCGAACAACCCTAGCTTGGATGGGTTTGACGTCGTCGATGATGCCAAGGACCTCCTCGAGAAGGAGTGTCCACACACCGTCTCTTGCGCCGACATCCTCTCTCTCGTGGCTCGTGATAGCGCCTACCTTGCTGGTGGGCTCGACTTCGAGATCCCAACAGGTCGTCGTGATGGCTTCGTCTCTAAGGAGGATGAGGTCCTCTCCAACGTCCCTCACCCGGAGTTCGGTGCCAAAGACCTCCTCAAAAACTTCACCGCTAAAGGTTTTACGGCGGAGGAGATGGTGACGCTGTCGGGGGCGCACTCTATCGGCACGTCTCACTGCTCATCGTTCACAAACCGGCTGTACAAGTACTACGGCACGTACGGCACGGACCCGTCGATGCCGGCGGCGTACGCGGCGGACATGAAGAGCAAGTGCCCGCCGGAGACGGCGGCGCAGCAGGACGCGACGATGGTGCAGCTCGACGACGTGACGCCGTTCAAGATGGACAACCAGTACTACAGGAACGTGCTCGCCGGGAACGTCACGTTCGCCTCCGACGTGGCCCTCCTCGACACGCCGGAGACGGCGGCGCTCGTCAGGCTCTACGCCGCCGGCGACCCCGC AGCCTGGCTCGCCCGCTTCGCCGCCGCGCTGGTCAAGGTCAGCAAGCTCGACGTGCTCACCGGCGGCGAGGGGGAGATCAGGCTCAACTGCTCCAGGATCAACTAATTAACTCAAATTAAATTCGCGTGAAGTTTGTGATTCTCATATATACAAACACTACTGCCCTGTTGCCATGCATGCATGAGGCTCATTTGATTTATTTTTCCTTATATGTTTGTGCATGATTCAATGTACTACTACTACTACAACAACTTTTGTTTATTTTTATTTTCAGTTTCATTTTTTACCTTTTGATGCTGAGTGTGCCAATTGGGCAAAAATAAATTGTGCTTCTGACCATATATATGGGTGAATTTATTCAAGGAGTAAAATGTGTGCTA ]
[+] EMBL AK060998 [ TCACTAGACAGCTTAGCTAGCAGGTAGCTGAGAGAGTTCCTTCGATCTCGATCTCTGCACGGCGACGATAAGATAAGCAATGGCAGTCTCGTCGCCGGCGCCGTCGTCTCTGCATGTGCCGATGGCCGCTGCGGCACTATTAGGGATGCTGATGATGATGTCGTCGGCGCCGGAGATGAAGGTGGAGGCGGCCGGCGGGTTGT CCGTCGGGTTCTACGCCGAATCGTGCCCCAAGGCGGAGGCGA TCGTCCGGGAC ACGGTGACCAAGGCGTTCGAGAAGGCGCCCGGCACGCCGGCCGACCTCATCCGCCTCTTCTTCCACGACTGCTTCGTCCGCGGATGTGACGCATCGGTGTTGCTGGAGTCGACACCAGGGAACAAGGCGGAGAGGGACAACAAGGCGAACAACCCTAGCTTGGATGGGTTTGACGTCGTCGATGATGCCAAGGACCTCCTCGAGAAGGAGTGTCCACACACCGTCTCTTGCGCCGACATCCTCTCTCTCGTGGCTCGTGATAGCGCCTACCTTGCTGGTGGGCTCGACTTCGAGATCCCAACAGGTCGTCGTGATGGCTTCGTCTCTAAGGAGGATGAGGTCCTCTCCAACGTCCCTCACCCGGAGTTCGGTGCCAAAGACCTCCTCAAAAACTTCACCGCTAAAGGTTTTACGGCGGAGGAGATGGTGACGCTGTCGGGGGCGCACTCTATCGGCACGTCTCACTGCTCATCGTTCACAAACCGGCTGTACAAGTACTACGGCACGTACGGCACGGACCCGTCGATGCCGGCGGCGTACGCGGCGGACATGAAGAGCAAGTGCCCGCCGGAGACGGCGGCGCAGCAGGACGCGACGATGGTGCAGCTCGACGACGTGACGCCGTTCAAGATGGACAACCAGTACTACAGGAACGTGCTCGCCGGGAACGTCACGTTCGCCTCCGACGTGGCCCTCCTCGACACGCCGGAGACGGCGGCGCTCGTCAGGCTCTACGCCGCCGGCGACCCCGC AGCCTGGCTCGCCCGCTTCGCCGCCGCGCTGGTCAAGGTCAGCAAGCTCGACGTGCTCACCGGCGGCGAGGGGGAGATCAGGCTCAACTGCTCCAGGATCAACTAATTAACTCAAATTAAATTCGCGTGAAGTTTGTGATTCTCATATATACAAACACTACTGCCCTGTTGCCATGCATGCATGAGGCTCATTTGATTTATTTTTCCTTATATGTTTGTGCATGATTCAATGTACTACTACTACTACAACAACTTTTGTTTATTTTTATTTTCAGTTTCATTTTTTACCTTTTGATGCTGAGTGTGCCAATTGGGCAAAAATAAATTGTGCTTCTGACCATATATATGGGTGAATTTATTCAAGGAGTAAAATGTGTGCTA ]
[+] EMBL AK061553 [ TCACTAGACAGCTTAGCTAGCAGGTAGCTGAGAGAGTTCCTTCGATCTCGATCTCTGCACGGCGACGATAAGATAAGCAATGGCAGTCTCGTCGCCGGCGCCGTCGTCTCTGCATGTGCCGATGGCCGCTGCGGCACTATTAGGGATGCTGATGATGATGTCGTCGGCGCCGGAGATGAAGGTGGAGGCGGCCGGCGGGTTGT CCGTCGGGTTCTACGCCGAATCGTGCCCCAAGGCGGAGGCGA TCGTCCGGGAC ACGGTGACCAAGGCGTTCGAGAAGGCGCCCGGCACGCCGGCCGACCTCATCCGCCTCTTCTTCCACGACTGCTTCGTCCGCGGATGTGACGCATCGGTGTTGCTGGAGTCGACACCAGGGAACAAGGCGGAGAGGGACAACAAGGCGAACAACCCTAGCTTGGATGGGTTTGACGTCGTCGATGATGCCAAGGACCTCCTCGAGAAGGAGTGTCCACACACCGTCTCTTGCGCCGACATCCTCTCTCTCGTGGCTCGTGATAGCGCCTACCTTGCTGGTGGGCTCGACTTCGAGATCCCAACAGGTCGTCGTGATGGCTTCGTCTCTAAGGAGGATGAGGTCCTCTCCAACGTCCCTCACCCGGAGTTCGGTGCCAAAGACCTCCTCAAAAACTTCACCGCTAAAGGTTTTACGGCGGAGGAGATGGTGACGCTGTCGGGGGCGCACTCTATCGGCACGTCTCACTGCTCATCGTTCACAAACCGGCTGTACAAGTACTACGGCACGTACGGCACGGACCCGTCGATGCCGGCGGCGTACGCGGCGGACATGAAGAGCAAGTGCCCGCCGGAGACGGCGGCGCAGCAGGACGCGACGATGGTGCAGCTCGACGACGTGACGCCGTTCAAGATGGACAACCAGTACTACAGGAACGTGCTCGCCGGGAACGTCACGTTCGCCTCCGACGTGGCCCTCCTCGACACGCCGGAGACGGCGGCGCTCGTCAGGCTCTACGCCGCCGGCGACCCCGC AGCCTGGCTCGCCCGCTTCGCCGCCGCGCTGGTCAAGGTCAGCAAGCTCGACGTGCTCACCGGCGGCGAGGGGGAGATCAGGCTCAACTGCTCCAGGATCAACTAATTAACTCAAATTAAATTCGCGTGAAGTTTGTGATTCTCATATATACAAACACTACTGCCCTGTTGCCATGCATGCATGAGGCTCATTTGATTT ]
[+] EMBL AK104219 [ ACTAGACAGCTTAGCTAGCAGGTAGCTGAGAGAGTTCCTTCGATCTCGATCTCTGCACGGCGACGATAAGATAAGCAATGGCAGTCTCGTCGCCGGCGCCGTCGTCTCTGCATGTGCCGATGGCCGCTGCGGCACTATTAGGGATGCTGATGATGATGTCGTCGGCGCCGGAGATGAAGGTGGAGGCGGCCGGCGGGTTGT CCGTCGGGTTCTACGCCGAATCGTGCCCCAAGGCGGAGGCGA TCGTCCGGGAC ACGGTGACCAAGGCGTTCGAGAAGGCGCCCGGCACGCCGGCCGACCTCATCCGCCTCTTCTTCCACGACTGCTTCGTCCGCGGATGTGACGCATCGGTGTTGCTGGAGTCGACACCAGGGAACAAGGCGGAGAGGGACAACAAGGCGAACAACCCTAGCTTGGATGGGTTTGACGTCGTCGATGATGCCAAGGACCTCCTCGAGAAGGAGTGTCCACACACCGTCTCTTGCGCCGACATCCTCTCTCTCGTGGCTCGTGATAGCGCCTACCTTGCTGGTGGGCTCGACTTCGAGATCCCAACAGGTCGTCGTGATGGCTTCGTCTCTAAGGAGGATGAGGTCCTCTCCAACGTCCCTCACCCGGAGTTCGGTGCCAAAGACCTCCTCAAAAACTTCACCGCTAAAGGTTTTACGGCGGAGGAGATGGTGACGCTGTCGGGGGCGCACTCTATCGGCACGTCTCACTGCTCATCGTTCACAAACCGGCTGTACAAGTACTACGGCACGTACGGCACGGACCCGTCGATGCCGGCGGCGTACGCGGCGGACATGAAGAGCAAGTGCCCGCCGGAGACGGCGGCGCAGCAGGACGCGACGATGGTGCAGCTCGACGACGTGACGCCGTTCAAGATGGACAACCAGTACTACAGGAACGTGCTCGCCGGGAACGTCACGTTCGCCTCCGACGTGGCCCTCCTCGACACGCCGGAGACGGCGGCGCTCGTCAGGCTCTACGCCGCCGGCGACCCCGC AGCCTGGCTCGCCCGCTTCGCCGCCGCGCTGGTCAAGGTCAGCAAGCTCGACGTGCTCACCGGCGGCGAGGGGGAGATCAGGCTCAACTGCTCCAGGATCAACTAATTAACTCAAATTAAATTCGCGTGAAGTTTGTGATTCTCATATATACAAACACTACTGCCCTGTTGCCATGCATGCATGAGGCTCATTTGATTTATTTTTCCTTATATGTTTGTGCATGATTCAATGTACTACTACTACTACAACAACTTTTGTTTATTTTTATTTTCAGTTTCATTTTTTACCTTTTGATGCTGAGTGTGCCAATTGGGCAAAAATAAATTGTGCTTCTGACCATATATATGGGTGAATTTATTCAAGGAGTAAAATGTGTGCT ]
[+] EMBL AK106200 [ ACTAGACAGCTTAGCTAGCAGGTAGCTGAGAGAGTTCCTTCGATCTCGATCTCTGCACGGCGACGATAAGATAAGCAATGGCAGTCTCGTCGCCGGCGCCGTCGTCTCTGCATGTGCCGATGGCCGCTGCGGCACTATTAGGGATGCTGATGATGATGTCGTCGGCGCCGGAGATGAAGGTGGAGGCGGCCGGCGGGTTGT CCGTCGGGTTCTACGCCGAATCGTGCCCCAAGGCGGAGGCGA TCGTCCGGGAC ACGGTGACCAAGGCGTTCGAGAAGGCGCCCGGCACGCCGGCCGACCTCATCCGCCTCTTCTTCCACGACTGCTTCGTCCGCGGATGTGACGCATCGGTGTTGCTGGAGTCGACACCAGGGAACAAGGCGGAGAGGGACAACAAGGCGAACAACCCTAGCTTGGATGGGTTTGACGTCGTCGATGATGCCAAGGACCTCCTCGAGAAGGAGTGTCCACACACCGTCTCTTGCGCCGACATCCTCTCTCTCGTGGCTCGTGATAGCGCCTACCTTGCTGGTGGGCTCGACTTCGAGATCCCAACAGGTCGTCGTGATGGCTTCGTCTCTAAGGAGGATGAGGTCCTCTCCAACGTCCCTCACCCGGAGTTCGGTGCCAAAGACCTCCTCAAAAACTTCACCGCTAAAGGTTTTACGGCGGAGGAGATGGTGACGCTGTCGGGGGCGCACTCTATCGGCACGTCTCACTGCTCATCGTTCACAAACCGGCTGTACAAGTACTACGGCACGTACGGCACGGACCCGTCGATGCCGGCGGCGTACGCGGCGGACATGAAGAGCAAGTGCCCGCCGGAGACGGCGGCGCAGCAGGACGCGACGATGGTGCAGCTCGACGACGTGACGCCGTTCAAGATGGACAACCAGTACTACAGGAACGTGCTCGCCGGGAACGTCACGTTCGCCTCCGACGTGGCCCTCCTCGACACGCCGGAGACGGCGGCGCTCGTCAGGCTCTACGCCGCCGGCGACCCCGC AGCCTGGCTCGCCCGCTTCGCCGCCGCGCTGGTCAAGGTCAGCAAGCTCGACGTGCTCACCGGCGGCGAGGGGGAGATCAGGCTCAACTGCTCCAGGATCAACTAATTAACTCAAATTAAATTCGCGTGAAGTTTGTGATTCTCATATATACAAACACTACTGCCCTGTTGCCATGCATGCATGAGGCTCATTTGATTTATTTTTCCTTATATGTTTGTGCATGATTCAATGTACTACTACTACTACAACAACTTTTGTTTATTTTTATTTTCAGTTTCATTTTTTACCTTTTGATGCTGAGTGTGCCAATTGGGCAAAAATAAATTGTGCTTCTGACCATATATATGGGTGAATTTA ]
[+] EMBL AK104641 [ CTTAGCTAGCAGGTAGCTGAGAGAGTTCCTTCGATCTCGATCTCTGCACGGCGACGATAAGATAAGCAATGGCAGTCTCGTCGCCGGCGCCGTCGTCTCTGCATGTGCCGATGGCCGCTGCGGCACTATTAGGGATGCTGATGATGATGTCGTCGGCGCCGGAGATGAAGGTGGAGGCGGCCGGCGGGTTGT CCGTCGGGTTCTACGCCGAATCGTGCCCCAAGGCGGAGGCGA TCGTCCGGGAC ACGGTGACCAAGGCGTTCGAGAAGGCGCCCGGCACGCCGGCCGACCTCATCCGCCTCTTCTTCCACGACTGCTTCGTCCGCGGATGTGACGCATCGGTGTTGCTGGAGTCGACACCAGGGAACAAGGCGGAGAGGGACAACAAGGCGAACAACCCTAGCTTGGATGGGTTTGACGTCGTCGATGATGCCAAGGACCTCCTCGAGAAGGAGTGTCCACACACCGTCTCTTGCGCCGACATCCTCTCTCTCGTGGCTCGTGATAGCGCCTACCTTGCTGGTGGGCTCGACTTCGAGATCCCAACAGGTCGTCGTGATGGCTTCGTCTCTAAGGAGGATGAGGTCCTCTCCAACGTCCCTCACCCGGAGTTCGGTGCCAAAGACCTCCTCAAAAACTTCACCGCTAAAGGTTTTACGGCGGAGGAGATGGTGACGCTGTCGGGGGCGCACTCTATCGGCACGTCTCACTGCTCATCGTTCACAAACCGGCTGTACAAGTACTACGGCACGTACGGCACGGACCCGTCGATGCCGGCGGCGTACGCGGCGGACATGAAGAGCAAGTGCCCGCCGGAGACGGCGGCGCAGCAGGACGCGACGATGGTGCAGCTCGACGACGTGACGCCGTTCAAGATGGACAACCAGTACTACAGGAACGTGCTCGCCGGGAACGTCACGTTCGCCTCCGACGTGGCCCTCCTCGACACGCCGGAGACGGCGGCGCTCGTCAGGCTCTACGCCGCCGGCGACCCCGC AGCCTGGCTCGCCCGCTTCGCCGCCGCGCTGGTCAAGGTCAGCAAGCTCGACGTGCTCACCGGCGGCGAGGGGGAGATCAGGCTCAACTGCTCCAGGATCAACTAATTAACTCAAATTAAATTCGCGTGAAGTTTGTGATTCTCATATATACAAACACTACTGCCCTGTTGCCATGCATGCATGAGGCTCATTTGATTTATTTTTCCTTATATGTTTGTGCATGATTCAATGTACTACTACTACTACAACAACTTTTGTTTATTTTTATTTTCAGT ]
[+] EMBL CF303184 [ TTAGCTAGCAGGTAGCTGAGAGAGTTCCTTCGATCTCGATCTCTGCACGGCGACGATAAGATAAGCAATGGCAGTCTCGTCGCCGGCGCCGTCGTCTCTGCATGTGCCGATGGCCGCTGCGGCACTATTAGGGATGCTGATGATGATGTCGTCGGCGCCGGAGATGAAGGTGGAGGCGGCCGGCGGGTTGT CCGTCGGGTTCTACGCCGAATCGTGCCCCAAGGCGGAGGCGA TCGTCCGGGAC ACGGTGACCAAGGCGTTCGAGAAGGCGCCCGGCACGCCGGCCGACCTCATCCGCCTCTTCTTCCACGACTGCTTCGTCCGCGGATGTGACGCATCGGTGTTGCTGGAGTCGACACCAGGGAACAAGGCGGAGAGGGACAACAAGGCGAACAACCCTAGCTTGGATGGGTTTGACGTCGTCGATGATGCCAAGGACCTCCTCGAGAAGGAGTGTCCACACACCGTCTCCTGCGCCGACATCCTCTCTCTCGTGGCTCGTGATAGCGCCTACCTTGCTGGTGGGCTCGACTTCGAGATCCCAACAGGTCGTCGTGATGGATTCGTCTCTAAGGAGGATGAGGTCCTCTCCAACGTCCCTCAC ]
[+] EMBL OSS3046A [ GCTAGCAGGTAGCTGAGAGAGTTCCTTCGATCTCGATCTCTGCACGGCGACGATAAGATAAGCAATGGCAGTCTCGTCGCCGGCGCCGTCGTCTCTGCATGTGCCGATGGCCGCTGCGGCACTATTAGGGATGCTGATGATGATGTCGTCGGCGCCGGAGATGAAGGTGGAGGCGGCCGGCGGGTTGTNCCGTCGGGTTCTACGCCGAATCGTGCCCAAAGGCGGAGGCGATTCGTCCCGGACAAGGGTGACCAA ]
[+] EMBL AU184492 [ GTCGTCGGCGCCGGAGATGAAGGTGGAGGCGGCCGGCGGGTTGT CCGTCGGGTTCTACGCCGAATCGTGCCCCAAGGCGGAGGCGA TCGTCCGGGAC ACGGTGACCAAGGCGTTCGAGAAGGCGCCCGGCACGCCGGCCGACCTCATCCGCCTCTTCTTCCACGACTGCTTCGTCCGCGGATGTGACGCATCGGTGTTGCTGGAGTCGACACCAGGGAACAAGGCGGAGAGGGACAACAAGGCGAACAACCCTAGCTTGGATGGGTTTGACGTCGTCGATGATGCCAAGGACCTCCTCGAGAAGGAGTGTCCACACACCGTCTCTTGCGCCGACATCCTCTCTCTCGTGGCTCGTGATAGCGCCTACCTTGCTGGTGGGCTCGACTTCGAGATCCCAACAGGTCGTCGTGATGGCTTCGTCTCTAAGGAGGATG ]
[+] EMBL AU174279 [ GGCGGCGCTCGTCAGGCTTTACGCCGCCGGCGACCCCGC AGCCTGGCTCGCCCGCTTCGCCGCCGCGCTGGTCAAGGTCAGCAAGCTCGACGTGCTCACCGGCGGCGAGGGGGAGATCAGGCTCAACTGCTCCAGGATCAACTAATTAACTCAAATTAAATTCGCGTGAAGTTTGTGATTCTCATATATACAAACACTACTGCCCTGTTGCCATGCATGCATGAGGCTCATTTGATTTATTTTTCCTTATATGTTTGTGCATGATTCAATGTACTACTACTACTACAACAACTTTTGTTTATTTTTATTTTCAGTTTCATTTTTTACCTTTTGATGCTGAGTGTGCCAATTGGGCAAAAATAAATTGTGCTTCTGACCATATATATGGGTGAATTTATTCAAGGAGTAAAATGTGTGCTATTCATGTTTTAAAAAA]
[+] EMBL AU184493 [ GCGCTCGTCAGGCTTTACGCCGCCGGCGACCCCGCAAGCCTGGCTCGCCCGCTTCGCCGCCGCGCTGGTCAAGGTCAGCAAGCTCGACGTGCTCACCGGCGGCGAGGGGGAGATCAGGCTCAACTGCTCCAGGATCAACTAATTAACTCAAATTAAATTCGCGTGAAGTTTGTGATTCTCATATATACAAACACTACTGCCCTGTTGCCATGCATGCATGAGGCTCATTTGATTTATTTTTCCTTATATGTTTGTGCATGATTCAATGTACTACTACTACTACAACAACTTTTGTTTATTTTTATTTTCAGTTTCATTTTTTACCTTTTGATGCTGAGTGTGCCAATTGGGCAAAAATAAATTGTGCTTCTGACCATATATATGGGTGAATTTATTCAAGGAGTAAAATGTGTGCTATTCATGTTTTAAAAA ]
consensusID : consensus_13902#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 406 fasta sequence
[CGACCCCGCAGCCTGGCTCGCCCGCTTCGCCGCCGCGCTGGTCAAGGTCAGCAAGCTCGACGTGCTCACCGGCGGCGAGGGGGAGATCAGGCTCAACTGCTCCAGGATCAACTAATTAACTCAAATTAAATTCGCGTGAAGTTTGTGATTCTCATATATACAAACACTACTGCCCTGTTGCCATGCATGCATGAGGCTCATTTGATTTATTTTTCTTTATATGTTTGTGCATGATTCAATGTACTACTACTACAACAACAACTTTTGTTTATTTTTATTTTCAGTTTCATTTTTTACCTTTTGATGCTGAGTGTGCCAATTGGGCAAAAATAAATTGTGCTTCTGACCATATTTATGGGTGAATTTATTCAAGGAGTAAAAAAAAAAAAAAAAAAAAAAAAAACTC]
[-] EMBL CF325941 [CGACCCCGCAGCCTGGCTCGCCCGCTTCGCCGCCGCGCTGGTCAAGGTCAGCAAGCTCGACGTGCTCACCGGCGGCGAGGGGGAGATCAGGCTCAACTGCTCCAGGATCAACTAATTAACTCAAATTAAATTCGCGTGAAGTTTGTGATTCTCATATATACAAACACTACTGCCCTGTTGCCATGCATGCATGAGGCTCATTTGATTTATTTTTCTTTATATGTTTGTGCATGATTCAATGTACTACTACTACAACAACAACTTTTGTTTATTTTTATTTTCAGTTTCATTTTTTACCTTTTGATGCTGAGTGTGCCAATTGGGCAAAAATAAATTGTGCTTCTGACCATATTTATGGGTGAATTTATTCAAGGAGTAAAAAAAAAAAAAAAAAAAAAAAAAACTC]
[-] EMBL CF326284 [ GCAGCCTGGCTCGCCCGCTTCGCCGCCGCGCTGGTCAAGGTCAGCAAGCTCGACGTGCTCACCGGCGGCGAGGGGGAGATCAGGCTCAACTGCTCCAGGATCAACTAATTAACTCAAATTAAATTCGCGTGAAGTTTGTGATTCTCATATATACAAACACTACTGCCCTGTTGCCATGCATGCATGAGGCTCATTTGATTTATTTTTCTTTATATGTTTGTGCATGATTCAATGTACTACTACTACAACAACAACTTTTGTTTAaaaaaaaa ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_13902#0 TTCACTAGACAGCTTAGCTAGCAGGTAGCTGAGAGAGTTCCTTCGATCTCGATCTCTGCA 60
consensus_13902#1 ------------------------------------------------------------
consensus_13902#0 CGGCGACGATAAGATAAGCAATGGCAGTCTCGTCGCCGGCGCCGTCGTCTCTGCATGTGC 120
consensus_13902#1 ------------------------------------------------------------
consensus_13902#0 CGATGGCCGCTGCGGCACTATTAGGGATGCTGATGATGATGTCGTCGGCGCCGGAGATGA 180
consensus_13902#1 ------------------------------------------------------------
consensus_13902#0 AGGTGGAGGCGGCCGGCGGGTTGTCCGTCGGGTTCTACGCCGAATCGTGCCCCAAGGCGG 240
consensus_13902#1 ------------------------------------------------------------
consensus_13902#0 AGGCGATCGTCCGGGACACGGTGACCAAGGCGTTCGAGAAGGCGCCCGGCACGCCGGCCG 300
consensus_13902#1 ------------------------------------------------------------
consensus_13902#0 ACCTCATCCGCCTCTTCTTCCACGACTGCTTCGTCCGCGGATGTGACGCATCGGTGTTGC 360
consensus_13902#1 ------------------------------------------------------------
consensus_13902#0 TGGAGTCGACACCAGGGAACAAGGCGGAGAGGGACAACAAGGCGAACAACCCTAGCTTGG 420
consensus_13902#1 ------------------------------------------------------------
consensus_13902#0 ATGGGTTTGACGTCGTCGATGATGCCAAGGACCTCCTCGAGAAGGAGTGTCCACACACCG 480
consensus_13902#1 ------------------------------------------------------------
consensus_13902#0 TCTCTTGCGCCGACATCCTCTCTCTCGTGGCTCGTGATAGCGCCTACCTTGCTGGTGGGC 540
consensus_13902#1 ------------------------------------------------------------
consensus_13902#0 TCGACTTCGAGATCCCAACAGGTCGTCGTGATGGCTTCGTCTCTAAGGAGGATGAGGTCC 600
consensus_13902#1 ------------------------------------------------------------
consensus_13902#0 TCTCCAACGTCCCTCACCCGGAGTTCGGTGCCAAAGACCTCCTCAAAAACTTCACCGCTA 660
consensus_13902#1 ------------------------------------------------------------
consensus_13902#0 AAGGTTTTACGGCGGAGGAGATGGTGACGCTGTCGGGGGCGCACTCTATCGGCACGTCTC 720
consensus_13902#1 ------------------------------------------------------------
consensus_13902#0 ACTGCTCATCGTTCACAAACCGGCTGTACAAGTACTACGGCACGTACGGCACGGACCCGT 780
consensus_13902#1 ------------------------------------------------------------
consensus_13902#0 CGATGCCGGCGGCGTACGCGGCGGACATGAAGAGCAAGTGCCCGCCGGAGACGGCGGCGC 840
consensus_13902#1 ------------------------------------------------------------
consensus_13902#0 AGCAGGACGCGACGATGGTGCAGCTCGACGACGTGACGCCGTTCAAGATGGACAACCAGT 900
consensus_13902#1 ------------------------------------------------------------
consensus_13902#0 ACTACAGGAACGTGCTCGCCGGGAACGTCACGTTCGCCTCCGACGTGGCCCTCCTCGACA 960
consensus_13902#1 ------------------------------------------------------------
consensus_13902#0 CGCCGGAGACGGCGGCGCTCGTCAGGCTCTACGCCGCCGGCGACCCCGCAGCCTGGCTCG 1020
consensus_13902#1 ----------------------------------------CGACCCCGCAGCCTGGCTCG 20
********************
consensus_13902#0 CCCGCTTCGCCGCCGCGCTGGTCAAGGTCAGCAAGCTCGACGTGCTCACCGGCGGCGAGG 1080
consensus_13902#1 CCCGCTTCGCCGCCGCGCTGGTCAAGGTCAGCAAGCTCGACGTGCTCACCGGCGGCGAGG 80
************************************************************
consensus_13902#0 GGGAGATCAGGCTCAACTGCTCCAGGATCAACTAATTAACTCAAATTAAATTCGCGTGAA 1140
consensus_13902#1 GGGAGATCAGGCTCAACTGCTCCAGGATCAACTAATTAACTCAAATTAAATTCGCGTGAA 140
************************************************************
consensus_13902#0 GTTTGTGATTCTCATATATACAAACACTACTGCCCTGTTGCCATGCATGCATGAGGCTCA 1200
consensus_13902#1 GTTTGTGATTCTCATATATACAAACACTACTGCCCTGTTGCCATGCATGCATGAGGCTCA 200
************************************************************
consensus_13902#0 TTTGATTTATTTTTCCTTATATGTTTGTGCATGATTCAATGTACTACTACTACTACAACA 1260
consensus_13902#1 TTTGATTTATTTTTCTTTATATGTTTGTGCATGATTCAATGTACTACTACTACAACAACA 260
*************** ************************************* ******
consensus_13902#0 ACTTTTGTTTATTTTTATTTTCAGTTTCATTTTTTACCTTTTGATGCTGAGTGTGCCAAT 1320
consensus_13902#1 ACTTTTGTTTATTTTTATTTTCAGTTTCATTTTTTACCTTTTGATGCTGAGTGTGCCAAT 320
************************************************************
consensus_13902#0 TGGGCAAAAATAAATTGTGCTTCTGACCATATATATGGGTGAATTTATTCAAGGAGTAAA 1380
consensus_13902#1 TGGGCAAAAATAAATTGTGCTTCTGACCATATTTATGGGTGAATTTATTCAAGGAGTAAA 380
******************************** ***************************
consensus_13902#0 ATGTGTGCTATTCATGTTTTAAAAAA--- 1406
consensus_13902#1 AAAAAAAAAA---AAAAAAAAAAAAACTC 406
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||