cluster # 13919

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Oryza sativa
cluster # 13919 cluster # 13919 Sequences # 14 consensus # 6

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_13919#0 length = 1208 sequences # 9
consensus_13919#1 length = 669 sequences # 1
consensus_13919#2 length = 665 sequences # 1

consensus_13919#3 length = 614 sequences # 1
consensus_13919#4 length = 539 sequences # 1
consensus_13919#5 length = 377 sequences # 1

consensusID : consensus_13919#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1208
fasta sequence

                              [AGACATCGGGGGGTTTTCCAGCCCTAAGCGCCGCCATTCATCGCTGCTGCGTGGTCGTCGTCGTCGCCGCCGCCGTCGTCCGCCATTACAGCCGACTGATCCCTCCTGCTCGGCTCCTTCCTGTAGGACTGAGGAGCAAGCGAATCCGGTGAGCAAGTGCGTCGAGAACCAAGAGGAGAGATGGGGGACACCGAGAGGAGCTCTATACT-GGTCCACATCTTGGTCATCGCCCTC-TGCCTCACCGCATTCGGCTTCGCCATCGCCGCGGAGCGCCGCCGCAGCACGGGCTCAATTGTTACAGACAGCTTCAATTCCACATTTTGTGTTTATGACTCTGATATTGCTAC-T-GGCTATGGTGTTGGTGCATTCCTGTTTCTCCTCTCTGGTCAGTCACTTCTTATGGTAGTTACCAAATGCATGTGTTTTGGCAAGCCACTTGCACCTGGAGGAAGTAGAGCTTGGTCAA-TCATATACTTTGCATCTTCATGGGTCACATTC-ATGATCGCGG-AGTCGTGCCTG-ATAGCTGGAGCAACAAAGAACGCGTACCACACCAGGTATAGGCATATGGT-ATACGT-GGGGAGCTGGACTTGCGAGTCCCTGCGCAAAGGAGTTTTTATCGCGGGAGCGGTCTTCGTGGTGTTCACTATGATTCTGAACGTGTACTTCTACATGTACTACACGAAATCGACAAGCCAGGCTGCCAAAAAGATCAACAAGACTACCCCCAATGTCGGTATGACTGGCTACGCATGACAATTGGATTTCGGTGCATCCTGGGCAGAAGATTAGTTTTTGGATAACTTGGCTACGGTGTCATTGTACTATCAGATGCTTCCGAAGAAGCATGTGGTGCAGGGTTGTGCAGGTTTTGGCCTGTCAGAGCTAATTCTAGTCAGTTTATGGCTGGGTGCCTGGGCCAAGCCCTATATTGCTAGGATGGGAGTGATTCGTTTTTGTTTTGTGCTGGTTAGGGTTAAGCACATCATGTTCTGTTTGTAACTGGTGAAGCTGCCGCCTAGAGCAGCTTGGCAGGCTAGCAATTTGGTGTGTGTTGTAGTCTGTTGTAAGTCGATTGCCTGTATTTTATTTGTGTGCGCTAGAGAAGAGATGAATCTGCTGGTTTCAGTAATTTCCTGGCCAAGGACATCAATTTATTTGCTTTGGGGGATCTGAGCCAATCTATAAAAATCCTATATTAGTGTAAAAAA]

[+] EMBL AU065190             [AGACATCGGGGGGTTTTCCAGCCCTAAGCGCCGCCATTCATCGCTGCTGCGTGGTCGTCGTCGTCGCCGCCGCCGTCGTCCGCCATTACAGCCGACTGATCCCTCCTGCTCGGCTCCTTCCTGTAGGACTGAGGAGCAAGCGAATCCGGTGAGCAAGTGCGTCGAGAACCAAGAGGAGAGATGGGGGACACCGAGAGGAGCTCTATACTAGGTCCACATCTTGGTCATCGCCCTCTTGCCTCACCGCATTCGGCTTCGCCATCGCCGCGGAGC CCGCCGCAGCACGGGCTCAATTGTTACAGACAGCTTCAATTCCACATTTTGTGTTTATGACTCTGATATTGCTAC T GGCTATGGTGTTGGTGCAATCCNGTTTCTCCNCTCTGGggaaa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AU165858             [AGACATCGGGGGGTTTTCCAGCCCTAAGCGCCGCCATTCATCGCTGCTGCGTGGTCGTCGTCGTCGCCGCCGCCGTCGTCCGCCATTACAGCCGACTGATCCCTCCTGCTCGGCTCCTTCCTGTAGGACTGAGGAGCAAGCGAATCCGGTGAGCAAGTGCGTCGAGAACCAAGAGGAGAGATGGGGGACACCGAGAGGAGCTCTATACT GGTCCACATCTTGGTCATCGCCCTC TGCCTCACCGCATTCGGCTTCG CATCGCCGCGGAGC CNGCCGCAGCACGGGCTCAATTGTTACAGACAGCTTCAATTCCACATTTTGTGTTTATGACTCTGATATTGCTACTT GGCTATGGTGTTTGTGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AK072565             [                                 CCATTCATCGCTGCTGCGTGGTCGTCGTCGTCGCCGCCGCCGTCGTCCGCCATTACAGCCGACTGATCCCTCCTGCTCGGCTCCTTCCTGTAGGACTGAGGAGCAAGCGAATCCGGTGAGCAAGTGCGTCGAGAACCAAGAGGAGAGATGGGGGACACCGAGAGGAGCTCTATACT GGTCCACATCTTGGTCATCGCCCTC TGCCTCACCGCATTCGGCTTCGCCATCGCCGCGGAGCGCCGCCGCAGCACGGGCTCAATTGTTACAGACAGCTTCAATTCCACATTTTGTGTTTATGACTCTGATATTGCTAC T GGCTATGGTGTTGGTGCATTCCTGTTTCTCCTCTCTGGTCAGTCACTTCTTATGGTAGTTACCAAATGCATGTGTTTTGGCAAGCCACTTGCACCTGGAGGAAGTAGAGCTTGGTCAA TCATATACTTTGCATCTTCATGGGTCACATTC ATGATCGCGG AGTCGTGCCTG ATAGCTGGAGCAACAAAGAACGCGTACCACACCAGGTATAGGCATATGGT ATACGT GGGGAGCTGGACTTGCGAGTCCCTGCGCAAAGGAGTTTTTATCGCGGGAGCGGTCTTCGTGGTGTTCACTATGATTCTGAACGTGTACTTCTACATGTACTACACGAAATCGACAAGCCAGGCTGCCAAAAAGATCAACAAGACTACCCCCAATGTCGGTATGACTGGCTACGCATGACAATTGGATTTCGGTGCATCCTGGGCAGAAGATTAGTTTTTGGATAACTTGGCTACGGTGTCATTGTACTATCAGATGCTTCCGAAGAAGCATGTGGTGCAGGGTTGTGCAGGTTTTGGCCTGTCAGAGCTAATTCTAGTCAGTTTATGGCTGGGTGCCTGGGCCAAGCCCTATATTGCTAGGATGGGAGTGATTCGTTTTTGTTTTGTGCTGGTTAGGGTTAAGCACATCATGTTCTGTTTGTAACTGGTGAAGCTGCCGCCTAGAGCAGCTTGGCAGGCTAGCAATTTGGTGTGTGTTGTAGTCTGTTGTAAGTCGATTGCCTGTATTTTATTTGTGTGCGCTAGAGAAGAGATGAATCTGCTGGTTTCAGTAATTTCCTGGCCAAGGACATCAATTTATTTGCTTTGGGGGATCTGAGCCAATCTATAAAAATCCTATAT            ]
[+] EMBL CF328395             [                                 CCATTCATCGCTGCTGCGTGGTCGTCGTCGTCGCCGCCGCCGTCGTCCGCCATTACAGCCGACTGATCCCTCCTGCTCGGCTCCTTCCTGTAGGACTGAGGAGCAAGCGAATCCGGTGAGCAAGTGCGTCGAGAACCAAGAGGAGAGATGGGGGACACCGAGAGGAGCTCTATACT GGTCCACATCTTGGTCATCGCCCTC TGCCTCACCGCATTCGGCTTCGCCATCGCCGCGGAGCGCCGCCGCAGCACGGGCTCAATTGTTACAGACAGCTTCAATTCCACATTTTGTGTTTATGACTCTGATATTGCTAC T GGCTATGGTGTTGGTGCATTCCTGTTTCTCCTCTCTGGTCAGTCACTTCTTATGGTAGTTACCAAATGCATGTGTTTTGGCAAGCCACTTGCACCTGGAGGAAGTAGAGCTTGGTCAA TCATATACTNTGCATCTTCATGGGTCACATTC ATGATCGCGG AGTCGTGCCTG ATAGCTGGAGCAACAAAGAACGCGTACCACACCAGGTATAGGCATATGGT ATA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CF308789             [                                 CCATTCATCGCTGCTGCGTGGTCGTCGTCGTCGCCGCCGCCGTCGTCCGCCATTACAGCCGACTGATCCCTCCTGCTCGGCTCCTTCCTGTAGGACTGAGGAGCAAGCGAATCCGGTGAGCAAGTGCGTCGAGAACCAAGAGGAGAGATGGGGGACACCGAGAGGAGCTCTATACT GGTCCACATCTTGGTCATCGCCCTC TGCCTCACCGCATTCGGCTTCGCCATCGCCGCGGAGCGCCGCCGCAGCACGGGCTCAATTGTTACAGACAGCTTCAATTCCACATTTTGTGTTTATGACTCTGATATTGCTAC TGGGCTATGGTGTTGGTGCATTCCTGTTTCTCCTCTCTGGTCAGTCACTTCTTATGGTAGTTACCAAATGCATGTGTTTTGGCAAGCCACTTGCACCTGGAGGAAGTAGAGCTTGGTCAA TCATATACTTTGCATCTTCATGGGTCACATTC ATGATCGCGG AGTCGTGCCTG ATAGCTGGAGCAACAAAGAACGCGTACCACACCAGGTATAGGCATATGGT ATACGTGGGGGAGCTGGACTTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL AK104141             [                                  CATTCATCGCTGCTGCGTGGTCGTCGTCGTCGCCGCCGCCGTCGTCCGCCATTACAGCCGACTGATCCCTCCTGCTCGGCTCCTTCCTGTAGGACTGAGGAGCAAGCGAATCCGGTGAGCAAGTGCGTCGAGAACCAAGAGGAGAGATGGGGGACACCGAGAGGAGCTCTATACT GGTCCACATCTTGGTCATCGCCCTC TGCCTCACCGCATTCGGCTTCGCCATCGCCGCGGAGCGCCGCCGCAGCACGGGCTCAATTGTTACAGACAGCTTCAATTCCACATTTTGTGTTTATGACTCTGATATTGCTAC T GGCTATGGTGTTGGTGCATTCCTGTTTCTCCTCTCTGGTCAGTCACTTCTTATGGTAGTTACCAAATGCATGTGTTTTGGCAAGCCACTTGCACCTGGAGGAAGTAGAGCTTGGTCAA TCATATACTTTGCATCTTCATGGGTCACATTC ATGATCGCGG AGTCGTGCCTG ATAGCTGGAGCAACAAAGAACGCGTACCACACCAGGTATAGGCATATGGT ATACGT GGGGAGCTGGACTTGCGAGTCCCTGCGCAAAGGAGTTTTTATCGCGGGAGCGGTCTTCGTGGTGTTCACTATGATTCTGAACGTGTACTTCTACATGTACTACACGAAATCGACAAGCCAGGCTGCCAAAAAGATCAACAAGACTACCCCCAATGTCGGTATGACTGGCTACGCATGACAATTGGATTTCGGTGCATCCTGGGCAGAAGATTAGTTTTTGGATAACTTGGCTACGGTGTCATTGTACTATCAGATGCTTCCGAAGAAGCATGTGGTGCAGGGTTGTGCAGGTTTTGGCCTGTCAGAGCTAATTCTAGTCAGTTTATGGCTGGGTGCCTGGGCCAAGCCCTATATTGCTAGGATGGGAGTGATTCGTTTTTGTTTTGTGCTGGTTAGGGTTAAGCACATCATGTTCTGTTTGTAACTGGTGAAGCTGCCGCCTAGAGCAGCTTGGCAGGCTAGCAATTTGGTGTGTGTTGTAGTCTGTTGTAAGTCGATTGCCTGTATTTTATTTGTGTGCGCTAGAGAAGAGATGAATCTGC                                                                                           ]
[+] EMBL C97753               [                                        ncntnGCTGCTTGGTCGTNGTCGTNGNCGNCGNCGTAGTCCGCNATTANAGCCGACTNATCCCTCCTGCTCGGNTCCTTCCTGTAGGACTAAGGAGCAAGCAAATCCGGTGAGCAAGTNCGTCGAGAACCAAGAGGAGAGATGGGGGANACCGAGAGGAGCTCTATACT GGTCCACATCTTGGTCATCGCCCTC TGCCTCACCGCATTCGGCTTCG CATCGCCGCGGA  GCCGCCGNAGCACGGGCTCAATTGTNACAGACAGCTTCAATTCCACATTTTGTGTTTATAACTCTNATATTGCTAC T GGCTATGGTGTTGGTGCATTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AU161450             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                       taaaAGCTTGGGCAATTCATATACTTTGCATCTTCATGGGTCACATTCAATGATCNCGGAANTCGTGCCTGAATAGCTGAAGCACCAAAGAACGCGTACCACACCAGGTATAGGCATATGGTAATACGT GGGAAGCT GACTTGCGAGTCCCTGCGCAAAGGAGTTTTTATCGCGGGAGCGGTCTTCGTGGTGTTCACTATGATTCTGAACGTGTACTTCTACATGTACTACACGAAATCGACAAGCCAGGCTGCCAAAAAGATCAACAAGACTACCCCCAATGTCGGTATGACTGGCTACGCATGACAATTGGATTTCGGTGCATCCTGGGCAGAAGATTAGTTTTTGGATAACTTGGCTACGGTGTCATTGTACTATCAGATGCTTCCGAAGAAGCATGTGGTGCAGGGTTGTGCAGGTTTTGGCCTGTCAGAGCTAATTCTAGTCAGTTTATGGCTGGGTGCCTGGGCCAAGCCCTATATTGCTAGGATGGGAGTGATTCGTTTTTGTTTTGTGCTGGTTAGGGTTAAGCACATCATGTTCTGTTTGTAACTGGTGAAGCTGCCGCCTAGAGCAGCTTGGCAGGCTAGCAATTTGGTGTGTGTTGTAGTCTGTTGTAAGTCGATTGCCTGTATTTTATTTGTGTGCGCTAGAGAAGAGATGAATCTGCTGGTTTCAGTAAaaaa                                                                           ]
[+] EMBL AU095173             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TTCGTGGTGTCCACTATGATTCTGAACGTGTACTTCTACATGTACTACACGAAATCGACAAGCCAGGCTGCCAAAAAGATCAACAAGACTACCCCCAATGTCGGTATGACT GCTACGCATGACAATTGGATTTCGGTGCATCCTGGGCAGAAGATTAGTTTTTGGATAACTTGGCTACGGTGTCATTGTACTATCAGATGCTTCCGAAGAAGCATGTGGTGCAGGGTTGTGCAGGTTTTGGCCTGTCAGAGCTAATTCTAGTCNGTTTATGGCTGGGTGCCTGGGCCAAGCCCTATATTGCTAGGATGGGNGTGATTCGTTTTTGTTTTGTGCTGGTTAGGGTTAAGCACATCATGTTCTGTTTGTAACTGGTGAA CTGCCGCCTAGAGCAGCTTGGCAGGCTAGCAATTTGGTGTGTGTTGTAGTCTGTTGTAAGTCGATTGCCTGTATTTTATTTGTGTGCGCTAGAGAAGAGATGAATCTGCTGGTTTCAGTAATTTCCTGGCCAAGGACATCAATTTATTTGCTTTGGGGGATCTGAGCCAATCTATAAAAATCCTATATTAGTGTAAAAAA]




>consensus_13919#0
AGACATCGGGGGGTTTTCCAGCCCTAAGCGCCGCCATTCATCGCTGCTGCGTGGTCGTCG
TCGTCGCCGCCGCCGTCGTCCGCCATTACAGCCGACTGATCCCTCCTGCTCGGCTCCTTC
CTGTAGGACTGAGGAGCAAGCGAATCCGGTGAGCAAGTGCGTCGAGAACCAAGAGGAGAG
ATGGGGGACACCGAGAGGAGCTCTATACTGGTCCACATCTTGGTCATCGCCCTCTGCCTC
ACCGCATTCGGCTTCGCCATCGCCGCGGAGCGCCGCCGCAGCACGGGCTCAATTGTTACA
GACAGCTTCAATTCCACATTTTGTGTTTATGACTCTGATATTGCTACTGGCTATGGTGTT
GGTGCATTCCTGTTTCTCCTCTCTGGTCAGTCACTTCTTATGGTAGTTACCAAATGCATG
TGTTTTGGCAAGCCACTTGCACCTGGAGGAAGTAGAGCTTGGTCAATCATATACTTTGCA
TCTTCATGGGTCACATTCATGATCGCGGAGTCGTGCCTGATAGCTGGAGCAACAAAGAAC
GCGTACCACACCAGGTATAGGCATATGGTATACGTGGGGAGCTGGACTTGCGAGTCCCTG
CGCAAAGGAGTTTTTATCGCGGGAGCGGTCTTCGTGGTGTTCACTATGATTCTGAACGTG
TACTTCTACATGTACTACACGAAATCGACAAGCCAGGCTGCCAAAAAGATCAACAAGACT
ACCCCCAATGTCGGTATGACTGGCTACGCATGACAATTGGATTTCGGTGCATCCTGGGCA
GAAGATTAGTTTTTGGATAACTTGGCTACGGTGTCATTGTACTATCAGATGCTTCCGAAG
AAGCATGTGGTGCAGGGTTGTGCAGGTTTTGGCCTGTCAGAGCTAATTCTAGTCAGTTTA
TGGCTGGGTGCCTGGGCCAAGCCCTATATTGCTAGGATGGGAGTGATTCGTTTTTGTTTT
GTGCTGGTTAGGGTTAAGCACATCATGTTCTGTTTGTAACTGGTGAAGCTGCCGCCTAGA
GCAGCTTGGCAGGCTAGCAATTTGGTGTGTGTTGTAGTCTGTTGTAAGTCGATTGCCTGT
ATTTTATTTGTGTGCGCTAGAGAAGAGATGAATCTGCTGGTTTCAGTAATTTCCTGGCCA
AGGACATCAATTTATTTGCTTTGGGGGATCTGAGCCAATCTATAAAAATCCTATATTAGT
GTAAAAAA

consensusID : consensus_13919#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 669
fasta sequence

                              [CTGATAAGCGGGAGCCCCCAACGAGGGGTTGCCCCTCCAGGTATAGGCATATGGTAACGTGGGGACCTGGACTACGAAGTCTTTGTGCAAAGGAGTTTTTTCCCGGGAGCGGTCCTCGTGGTGTTCCCTATGATTCTGGCCGTGTACTTCTACATGTAACCCCCGAAATCGACAAGGCAGGCTGCCAAAAAGATCAACAAGGCTTCCCCCAATGTCGGTATGACCGGGTACGCATGGCAATTGGGGTTTGGAGTATCCTGGGGCAAAAAATTAGTTTTTGGGTAACTTGGCTACGGGGTCATTGTAAAATAACATGCTTTCCAAGAAGCATGTGGTTCAGGGTTGTCCAGGTTTTGGCCTGTCAGGGCTAATTTTGGTCAGTTTATGGCCGGGTGCCTGGGCCAAGCCCTATAATGTTAGGATGGGAGTGATTCGGTTTTGGTTTGTGCCGGCTAGGGTTAAGCGCATCATGTTCTGTTTGTAACTGGTGAAGCTTCCCCCTAGAGCAACTTGGCAGGCTAGCAATTTGGTGTGTGTTGTAGTCTGTTGTAAGTCTATTGCCTGTATTTTAAAAGGGTGCGCTAGAGAAGAGATGAATTTTCTGGTTTCAGTAATTTCCTGGCCAAGGTCTTCGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[-] EMBL CA762522             [CTGATAAGCGGGAGCCCCCAACGAGGGGTTGCCCCTCCAGGTATAGGCATATGGTAACGTGGGGACCTGGACTACGAAGTCTTTGTGCAAAGGAGTTTTTTCCCGGGAGCGGTCCTCGTGGTGTTCCCTATGATTCTGGCCGTGTACTTCTACATGTAACCCCCGAAATCGACAAGGCAGGCTGCCAAAAAGATCAACAAGGCTTCCCCCAATGTCGGTATGACCGGGTACGCATGGCAATTGGGGTTTGGAGTATCCTGGGGCAAAAAATTAGTTTTTGGGTAACTTGGCTACGGGGTCATTGTAAAATAACATGCTTTCCAAGAAGCATGTGGTTCAGGGTTGTCCAGGTTTTGGCCTGTCAGGGCTAATTTTGGTCAGTTTATGGCCGGGTGCCTGGGCCAAGCCCTATAATGTTAGGATGGGAGTGATTCGGTTTTGGTTTGTGCCGGCTAGGGTTAAGCGCATCATGTTCTGTTTGTAACTGGTGAAGCTTCCCCCTAGAGCAACTTGGCAGGCTAGCAATTTGGTGTGTGTTGTAGTCTGTTGTAAGTCTATTGCCTGTATTTTAAAAGGGTGCGCTAGAGAAGAGATGAATTTTCTGGTTTCAGTAATTTCCTGGCCAAGGTCTTCGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_13919#1
CTGATAAGCGGGAGCCCCCAACGAGGGGTTGCCCCTCCAGGTATAGGCATATGGTAACGT
GGGGACCTGGACTACGAAGTCTTTGTGCAAAGGAGTTTTTTCCCGGGAGCGGTCCTCGTG
GTGTTCCCTATGATTCTGGCCGTGTACTTCTACATGTAACCCCCGAAATCGACAAGGCAG
GCTGCCAAAAAGATCAACAAGGCTTCCCCCAATGTCGGTATGACCGGGTACGCATGGCAA
TTGGGGTTTGGAGTATCCTGGGGCAAAAAATTAGTTTTTGGGTAACTTGGCTACGGGGTC
ATTGTAAAATAACATGCTTTCCAAGAAGCATGTGGTTCAGGGTTGTCCAGGTTTTGGCCT
GTCAGGGCTAATTTTGGTCAGTTTATGGCCGGGTGCCTGGGCCAAGCCCTATAATGTTAG
GATGGGAGTGATTCGGTTTTGGTTTGTGCCGGCTAGGGTTAAGCGCATCATGTTCTGTTT
GTAACTGGTGAAGCTTCCCCCTAGAGCAACTTGGCAGGCTAGCAATTTGGTGTGTGTTGT
AGTCTGTTGTAAGTCTATTGCCTGTATTTTAAAAGGGTGCGCTAGAGAAGAGATGAATTT
TCTGGTTTCAGTAATTTCCTGGCCAAGGTCTTCGGGGAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAA

consensusID : consensus_13919#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 665
fasta sequence

                              [GGTCCCGCCCCCCCCCCAGGTTGCCGGATTCTATAACTTGTTAGGTGGCCGGCCCAAGGGGGATTTTGGGTTTTCCTGGGCAAAAGTTAGTTTNNNNNTTGACTGACGCCGGGTCCTTGACCTTTAAAACCTTCCAAAAACCCTTGGTTCAGGGTTTGCCAGTTTTTGCCCTTTAGAACTAATTTTTTCAGTTTAAGGCTGGGTGCTGGGCCCAAGCCCTATATGCTNGGGATGGAGTGATTCGTTTTTGTTTGTGCTGGTANGGGTTAAGCACATCATGTTCTGTTTGTAACTGGTGAAGCTGCCGCCTAGAGCAGCTGGGCAGGCTAGCAATNTGGTGTGTGTGNTAGTCTGTGTTAAGTCGATTGCCTGTATNTTATTTGTGTGCGCTAGAGAAGAGATGAATCTGCTGGTTTCAGTAGTTTCCTGGCCAAGGACATCAATTTATTTGCTTTGGGGGATCTGAGCCAATCTATAAAAATCCTATATTAGTGTGACCATTAGCTCGGATCGTGTGTAGCCACATCATCAATACTAGGCTGGCTGTTGGATTTCATCTAAATGGCTGAAGAGAAGTGCTTGCAGCCCGACTGTTCCGTCTTCTATTAATGATGTTATTTTCTTTATCTTAGTAATGGTGTTAATTGATGCCTCAAAAAAAAAAA]

[-] EMBL CA761263             [GGTCCCGCCCCCCCCCCAGGTTGCCGGATTCTATAACTTGTTAGGTGGCCGGCCCAAGGGGGATTTTGGGTTTTCCTGGGCAAAAGTTAGTTTNNNNNTTGACTGACGCCGGGTCCTTGACCTTTAAAACCTTCCAAAAACCCTTGGTTCAGGGTTTGCCAGTTTTTGCCCTTTAGAACTAATTTTTTCAGTTTAAGGCTGGGTGCTGGGCCCAAGCCCTATATGCTNGGGATGGAGTGATTCGTTTTTGTTTGTGCTGGTANGGGTTAAGCACATCATGTTCTGTTTGTAACTGGTGAAGCTGCCGCCTAGAGCAGCTGGGCAGGCTAGCAATNTGGTGTGTGTGNTAGTCTGTGTTAAGTCGATTGCCTGTATNTTATTTGTGTGCGCTAGAGAAGAGATGAATCTGCTGGTTTCAGTAGTTTCCTGGCCAAGGACATCAATTTATTTGCTTTGGGGGATCTGAGCCAATCTATAAAAATCCTATATTAGTGTGACCATTAGCTCGGATCGTGTGTAGCCACATCATCAATACTAGGCTGGCTGTTGGATTTCATCTAAATGGCTGAAGAGAAGTGCTTGCAGCCCGACTGTTCCGTCTTCTATTAATGATGTTATTTTCTTTATCTTAGTAATGGTGTTAATTGATGCCTCAAAAAAAAAAA]




>consensus_13919#2
GGTCCCGCCCCCCCCCCAGGTTGCCGGATTCTATAACTTGTTAGGTGGCCGGCCCAAGGG
GGATTTTGGGTTTTCCTGGGCAAAAGTTAGTTTNNNNNTTGACTGACGCCGGGTCCTTGA
CCTTTAAAACCTTCCAAAAACCCTTGGTTCAGGGTTTGCCAGTTTTTGCCCTTTAGAACT
AATTTTTTCAGTTTAAGGCTGGGTGCTGGGCCCAAGCCCTATATGCTNGGGATGGAGTGA
TTCGTTTTTGTTTGTGCTGGTANGGGTTAAGCACATCATGTTCTGTTTGTAACTGGTGAA
GCTGCCGCCTAGAGCAGCTGGGCAGGCTAGCAATNTGGTGTGTGTGNTAGTCTGTGTTAA
GTCGATTGCCTGTATNTTATTTGTGTGCGCTAGAGAAGAGATGAATCTGCTGGTTTCAGT
AGTTTCCTGGCCAAGGACATCAATTTATTTGCTTTGGGGGATCTGAGCCAATCTATAAAA
ATCCTATATTAGTGTGACCATTAGCTCGGATCGTGTGTAGCCACATCATCAATACTAGGC
TGGCTGTTGGATTTCATCTAAATGGCTGAAGAGAAGTGCTTGCAGCCCGACTGTTCCGTC
TTCTATTAATGATGTTATTTTCTTTATCTTAGTAATGGTGTTAATTGATGCCTCAAAAAA
AAAAA

consensusID : consensus_13919#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 614
fasta sequence

                              [CCCTGCGCAAAGGNGTTTNNNTCGCNGGAGCGGTCTTCGTNGTGTTCCACTNTGATNCTGNACGTGTNCTTCTNCNTGTNCTACACGANANCGNCAAGCCNGGCTGCCAANNNGNTCAACAAGACNNCCCCCAATGTCGGTATGNCTGNTNCGCNTGACANTTGNNTTTCGGNGCATCCTGGGCNGNNGNTTNGTTTNTGGNNNACTTGGCTNCGGTGTCNTTGTNCTATCNGATGCNTCCGNAGNNGCNTGTGGTNCAGNGTNGTGCAGNTTTTGGCCTNTCNGNGCTANTTCTNGTCNGTTNNTGGCTGGGTGCCCTGGGCCAAGCCCTNNNTTGCTNGGNTGGGAGTGNTTCGTTTNTGTTTTGTGCTGGTTAGGGTTNAGCACATCNTGTTCTGTTTGTNACTGGTGAAGCTGCCGCCTAGAGCNGCTTGGCAGGCTAGCANTTTGGTGTGTGTTGTAGTCTGTTGTAAGTCGATTGCCTGTATTTTATTTGTGTGCGCTAGAGAAGAGATGAATCTGCTGGTTTCAGTAATNTCCTGGCCAAGGACATCAATTTATTTGCTTTGGGGGATCTGAGCCAATCTATAAAAATCCTATATTAGTGTNAAAAA]

[+] EMBL AU030649             [CCCTGCGCAAAGGNGTTTNNNTCGCNGGAGCGGTCTTCGTNGTGTTCCACTNTGATNCTGNACGTGTNCTTCTNCNTGTNCTACACGANANCGNCAAGCCNGGCTGCCAANNNGNTCAACAAGACNNCCCCCAATGTCGGTATGNCTGNTNCGCNTGACANTTGNNTTTCGGNGCATCCTGGGCNGNNGNTTNGTTTNTGGNNNACTTGGCTNCGGTGTCNTTGTNCTATCNGATGCNTCCGNAGNNGCNTGTGGTNCAGNGTNGTGCAGNTTTTGGCCTNTCNGNGCTANTTCTNGTCNGTTNNTGGCTGGGTGCCCTGGGCCAAGCCCTNNNTTGCTNGGNTGGGAGTGNTTCGTTTNTGTTTTGTGCTGGTTAGGGTTNAGCACATCNTGTTCTGTTTGTNACTGGTGAAGCTGCCGCCTAGAGCNGCTTGGCAGGCTAGCANTTTGGTGTGTGTTGTAGTCTGTTGTAAGTCGATTGCCTGTATTTTATTTGTGTGCGCTAGAGAAGAGATGAATCTGCTGGTTTCAGTAATNTCCTGGCCAAGGACATCAATTTATTTGCTTTGGGGGATCTGAGCCAATCTATAAAAATCCTATATTAGTGTNAAAAA]




>consensus_13919#3
CCCTGCGCAAAGGNGTTTNNNTCGCNGGAGCGGTCTTCGTNGTGTTCCACTNTGATNCTG
NACGTGTNCTTCTNCNTGTNCTACACGANANCGNCAAGCCNGGCTGCCAANNNGNTCAAC
AAGACNNCCCCCAATGTCGGTATGNCTGNTNCGCNTGACANTTGNNTTTCGGNGCATCCT
GGGCNGNNGNTTNGTTTNTGGNNNACTTGGCTNCGGTGTCNTTGTNCTATCNGATGCNTC
CGNAGNNGCNTGTGGTNCAGNGTNGTGCAGNTTTTGGCCTNTCNGNGCTANTTCTNGTCN
GTTNNTGGCTGGGTGCCCTGGGCCAAGCCCTNNNTTGCTNGGNTGGGAGTGNTTCGTTTN
TGTTTTGTGCTGGTTAGGGTTNAGCACATCNTGTTCTGTTTGTNACTGGTGAAGCTGCCG
CCTAGAGCNGCTTGGCAGGCTAGCANTTTGGTGTGTGTTGTAGTCTGTTGTAAGTCGATT
GCCTGTATTTTATTTGTGTGCGCTAGAGAAGAGATGAATCTGCTGGTTTCAGTAATNTCC
TGGCCAAGGACATCAATTTATTTGCTTTGGGGGATCTGAGCCAATCTATAAAAATCCTAT
ATTAGTGTNAAAAA

consensusID : consensus_13919#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 539
fasta sequence

                              [CACTATGATTCTGAACGTGTACTTCTACATGTACTACACGGAATCGACAAGCCAGGCTGCCAAAAAGATCAACAAGACTACCCCCAATGTCGGTATGACTGGCTACGCATGACAATTGGATTTCGGTGCATCCTGGGCAGAAGATTAGTTTTTGGATAACTTGGCTACGGTGTCATTGTACTATCAGATGCTTCCGAAGAAGCATGTGGTGCAGGGTTGTGCAGGTTTTGGCCTGTCAGAGCTAATTCTAGTCAGTTTATGGCTGGGTGCCTGGGCCAAGCCCTACATTGCTAGGATGGGAGTGATTCGTTTTTGTTTTGTGCTGGTTAGGGTTAAGCACATCATGTTCTGTTTGTAACTGGTGAAGCTGCCGCCTAGAGCAGCTTGGCAGGCTAGCAATTTGGTGTGTGTTGTAGTCTGTTGTAAGTCGATTGCCTGTATTTTATTTGTGTGCGCTAGAGAAGAGATGAATCTGCTGGTTTCAGTAATTTCCTGGCCAAGGACATCAATTTATTTGCTTTGGGGGATCAAAAAAAAAA]

[-] EMBL CF308790             [CACTATGATTCTGAACGTGTACTTCTACATGTACTACACGGAATCGACAAGCCAGGCTGCCAAAAAGATCAACAAGACTACCCCCAATGTCGGTATGACTGGCTACGCATGACAATTGGATTTCGGTGCATCCTGGGCAGAAGATTAGTTTTTGGATAACTTGGCTACGGTGTCATTGTACTATCAGATGCTTCCGAAGAAGCATGTGGTGCAGGGTTGTGCAGGTTTTGGCCTGTCAGAGCTAATTCTAGTCAGTTTATGGCTGGGTGCCTGGGCCAAGCCCTACATTGCTAGGATGGGAGTGATTCGTTTTTGTTTTGTGCTGGTTAGGGTTAAGCACATCATGTTCTGTTTGTAACTGGTGAAGCTGCCGCCTAGAGCAGCTTGGCAGGCTAGCAATTTGGTGTGTGTTGTAGTCTGTTGTAAGTCGATTGCCTGTATTTTATTTGTGTGCGCTAGAGAAGAGATGAATCTGCTGGTTTCAGTAATTTCCTGGCCAAGGACATCAATTTATTTGCTTTGGGGGATCAAAAAAAAAA]




>consensus_13919#4
CACTATGATTCTGAACGTGTACTTCTACATGTACTACACGGAATCGACAAGCCAGGCTGC
CAAAAAGATCAACAAGACTACCCCCAATGTCGGTATGACTGGCTACGCATGACAATTGGA
TTTCGGTGCATCCTGGGCAGAAGATTAGTTTTTGGATAACTTGGCTACGGTGTCATTGTA
CTATCAGATGCTTCCGAAGAAGCATGTGGTGCAGGGTTGTGCAGGTTTTGGCCTGTCAGA
GCTAATTCTAGTCAGTTTATGGCTGGGTGCCTGGGCCAAGCCCTACATTGCTAGGATGGG
AGTGATTCGTTTTTGTTTTGTGCTGGTTAGGGTTAAGCACATCATGTTCTGTTTGTAACT
GGTGAAGCTGCCGCCTAGAGCAGCTTGGCAGGCTAGCAATTTGGTGTGTGTTGTAGTCTG
TTGTAAGTCGATTGCCTGTATTTTATTTGTGTGCGCTAGAGAAGAGATGAATCTGCTGGT
TTCAGTAATTTCCTGGCCAAGGACATCAATTTATTTGCTTTGGGGGATCAAAAAAAAAA

consensusID : consensus_13919#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 377
fasta sequence

                              [CCATTCATCGCTGCTGCGTGGTCGTCGTCGCCGCCGCCGTCGTCCGCCATTACAGCCGACTGATCCCTCCTGGTCGGCTCCTTCCTGGTGAGCTACTGCTGCCGGCGGATTCTTTGCTATCTTTCCCCCCATTCACAGCCTCCTCTCCCGTCTCCCCGTGCAGCCATGCTCACTCACTCACCCACTCACTCACCAGTAGGACTGAGGAGCAAGCGAATCCGGTGAGCAAGTGCGTCGAGAACCAAGAGGAGAGATGGGGGACACCGAGAGGAGCTCTATACTGGTCCACATCTTGGTCATCGCCCTCTGCCTCACCGCATTCNGCTTCGCCATCGCCGCGGAGCGCCGCCGCAGCACGGGCTCAATTGTTACAGACA]

[+] EMBL CF328233             [CCATTCATCGCTGCTGCGTGGTCGTCGTCGCCGCCGCCGTCGTCCGCCATTACAGCCGACTGATCCCTCCTGGTCGGCTCCTTCCTGGTGAGCTACTGCTGCCGGCGGATTCTTTGCTATCTTTCCCCCCATTCACAGCCTCCTCTCCCGTCTCCCCGTGCAGCCATGCTCACTCACTCACCCACTCACTCACCAGTAGGACTGAGGAGCAAGCGAATCCGGTGAGCAAGTGCGTCGAGAACCAAGAGGAGAGATGGGGGACACCGAGAGGAGCTCTATACTGGTCCACATCTTGGTCATCGCCCTCTGCCTCACCGCATTCNGCTTCGCCATCGCCGCGGAGCGCCGCCGCAGCACGGGCTCAATTGTTACAGACA]




>consensus_13919#5
CCATTCATCGCTGCTGCGTGGTCGTCGTCGCCGCCGCCGTCGTCCGCCATTACAGCCGAC
TGATCCCTCCTGGTCGGCTCCTTCCTGGTGAGCTACTGCTGCCGGCGGATTCTTTGCTAT
CTTTCCCCCCATTCACAGCCTCCTCTCCCGTCTCCCCGTGCAGCCATGCTCACTCACTCA
CCCACTCACTCACCAGTAGGACTGAGGAGCAAGCGAATCCGGTGAGCAAGTGCGTCGAGA
ACCAAGAGGAGAGATGGGGGACACCGAGAGGAGCTCTATACTGGTCCACATCTTGGTCAT
CGCCCTCTGCCTCACCGCATTCNGCTTCGCCATCGCCGCGGAGCGCCGCCGCAGCACGGG
CTCAATTGTTACAGACA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13919#1      ------------------------------------------------------------
consensus_13919#4      ------------------------------------------------------------
consensus_13919#2      ------------------------------------------------------------
consensus_13919#3      ------------------------------------------------------------
consensus_13919#0      AGACATCGGGGGGTTTTCCAGCCCTAAGCGCCGCCATTCATCGCTGCTGCGTGGTCGTCG 60
consensus_13919#5      ------------------------------------------------------------
                                                                                   

consensus_13919#1      ------------------------------------------------------------
consensus_13919#4      ------------------------------------------------------------
consensus_13919#2      ------------------------------------------------------------
consensus_13919#3      ------------------------------------------------------------
consensus_13919#0      TCGTCGCCGCCGCCGTCGTCCGCCATTACAGCCGACTGATCCCTCCTGCTCGGCTCCTTC 120
consensus_13919#5      ------------------------------------------------------------
                                                                                   

consensus_13919#1      ------------------------------------------------------------
consensus_13919#4      ------------------------------------------------------------
consensus_13919#2      ------------------------------------------------------------
consensus_13919#3      ------------------------------------------------------------
consensus_13919#0      CTGTAGGACTGAGGAGCAAGCGAATCCGGTGAGCAAGTGCGTCGAGAACCAAGAGGAGAG 180
consensus_13919#5      ------------------------------------------------------------
                                                                                   

consensus_13919#1      ------------------------------------------------------------
consensus_13919#4      ------------------------------------------------------------
consensus_13919#2      ------------------------------------------------------------
consensus_13919#3      ------------------------------------------------------------
consensus_13919#0      ATGGGGGACACCGAGAGGAGCTCTATACTGGTCCACATCTTGGTCATCGCCCTCTGCCTC 240
consensus_13919#5      ------------------------------------------------------------
                                                                                   

consensus_13919#1      ------------------------------------------------------------
consensus_13919#4      ------------------------------------------------------------
consensus_13919#2      ------------------------------------------------------------
consensus_13919#3      ------------------------------------------------------------
consensus_13919#0      ACCGCATTCGGCTTCGCCATCGCCGCGGAGCGCCGCCGCAGCACGGGCTCAATTGTTACA 300
consensus_13919#5      ------------------------------------------------------------
                                                                                   

consensus_13919#1      ------------------------------------------------------------
consensus_13919#4      ------------------------------------------------------------
consensus_13919#2      ------------------------------------------------------------
consensus_13919#3      ------------------------------------------------------------
consensus_13919#0      GACAGCTTCAATTCCACATTTTGTGTTTATGACTCTGATATTGCTACTGGCTATGGTGTT 360
consensus_13919#5      ------------------------------------------------------------
                                                                                   

consensus_13919#1      ------------------------------------------------------------
consensus_13919#4      ------------------------------------------------------------
consensus_13919#2      ------------------------------------------------------------
consensus_13919#3      ------------------------------------------------------------
consensus_13919#0      GGTGCATTCCTGTTTCTCCTCTCTGGTCAGTCACTTCTTATGGTAGTTACCAAATGCATG 420
consensus_13919#5      ------------------------------------------------------------
                                                                                   

consensus_13919#1      ------------------------------------------------------------
consensus_13919#4      ------------------------------------------------------------
consensus_13919#2      ------------------------------------------------------------
consensus_13919#3      ------------------------------------------------------------
consensus_13919#0      TGTTTTGGCAAGCCACTTGCACCTGGAGGAAGTAGAGCTTGGTCAATCATATACTTTGCA 480
consensus_13919#5      ------------------------------------------------------------
                                                                                   

consensus_13919#1      ----------------------------------CTGATAAGCGGGAGCCCCCAACGAGG 26
consensus_13919#4      ------------------------------------------------------------
consensus_13919#2      ------------------------------------------------------------
consensus_13919#3      ------------------------------------------------------------
consensus_13919#0      TCTTCATGGGTCACATTCATGATCGCGGAGTCGTGCCTGATAGCTGGAGCAACAAAGAAC 540
consensus_13919#5      ------------------------------------------------------------
                                                                                   

consensus_13919#1      GGTTGCCCCTCCAGGTATAGGCATATGGTA-ACGTGGGGACCTGGACTACGAAGTCTTTG 85
consensus_13919#4      ------------------------------------------------------------
consensus_13919#2      ------------------------------------------------------------
consensus_13919#3      -------------------------------------------------------CCCTG 5
consensus_13919#0      GCGTACCACACCAGGTATAGGCATATGGTATACGTGGGGAGCTGGACTTGCGAGTCCCTG 600
consensus_13919#5      ------------------------------------------------------------
                                                                                   

consensus_13919#1      TGCAAAGGAGTTTTTTCC-CGGGAGCGGTCCTCGTGGTGTTCC-CTATGATTCTGGCCGT 143
consensus_13919#4      -----------------------------------------CA-CTATGATTCTGAACGT 18
consensus_13919#2      ------------------------------------------------------------
consensus_13919#3      CGCAAAGGNGTTTNNNTCGCNGGAGCGGTCTTCGTNGTGTTCCACTNTGATNCTGNACGT 65
consensus_13919#0      CGCAAAGGAGTTTTTATCGCGGGAGCGGTCTTCGTGGTGTTCA-CTATGATTCTGAACGT 659
consensus_13919#5      ------------------------------------------------------------
                                                                                   

consensus_13919#1      GTACTTCTACATGTAACCCCCGAAATCGACAAGGC-AGGCTGCCAAAAAGATCAACAAGG 202
consensus_13919#4      GTACTTCTACATGTACTACACGGAATCGACAAGCC-AGGCTGCCAAAAAGATCAACAAGA 77
consensus_13919#2      ------------------------------GGTCC-CGCCCCCCCCCCAGGTTGCC--GG 27
consensus_13919#3      GTNCTTCTNCNTGTNCTACACGANANCGNCAAGCC-NGGCTGCCAANNNGNTCAACAAGA 124
consensus_13919#0      GTACTTCTACATGTACTACACGAAATCGACAAGCC-AGGCTGCCAAAAAGATCAACAAGA 718
consensus_13919#5      ------------------CCATTCATCGCTGCTGCGTGGTCGTCGTCGCCGCCGCC--GT 40
                                                         *  *     *           *  * 

consensus_13919#1      CTTCCCCCAATGTCGGTATGACCGGGTACGCATGGCAATTGGGGTTTGGAGTATCCTGGG 262
consensus_13919#4      CTACCCCCAATGTCGGTATGACTGGCTACGCATGACAATTGGATTTCGGTGCATCCTGGG 137
consensus_13919#2      ATTCTATAACTTGTTAGGTGGCCGG---CCCAAGGG----GGATTTTGGGTTTTCCTGGG 80
consensus_13919#3      CNNCCCCCAATGTCGGTATGNCTGN-TNCGCNTGACANTTGNNTTTCGGNGCATCCTGGG 183
consensus_13919#0      CTACCCCCAATGTCGGTATGACTGGCTACGCATGACAATTGGATTTCGGTGCATCCTGGG 778
consensus_13919#5      CGTCCGCCATTAC--AGCCGACTGATCCCTCCTGGTCGGCTCCTTCCTGGTGAGCTACTG 98
                          *    * *        * * *    * *  *          *   *     *    *

consensus_13919#1      GCAAAAAATTAGTTTTTGGGTAACTTGGCTACGGGGTCATTGTAAAATAACATGCTTTCC 322
consensus_13919#4      -CAGAAGATTAGTTTTTGGATAACTTGGCTACGGTGTCATTGTACTATCAGATGCTTCCG 196
consensus_13919#2      --CAAAAGTTAGTTTNNNNNTTGACTGAC-GCCGGGTCCTTGACCTTTAAAA--CCTTCC 135
consensus_13919#3      -CNGNNGNTTNGTTTNTGGNNNACTTGGCTNCGGTGTCNTTGTNCTATCNGATGCNTCCG 242
consensus_13919#0      -CAGAAGATTAGTTTTTGGATAACTTGGCTACGGTGTCATTGTACTATCAGATGCTTCCG 837
consensus_13919#5      -CTGCCGGCGGATTCTTTGCTATCTTTCCCCCCAT-TCACAGCCTCCTCTCCCGTCTCCC 156
                                   **           *  *  *    **   *     *        * * 

consensus_13919#1      AAGAAGCATGTGGTTCAGGGTTGTCCAGGTTTTGGCCTGTCAGGGCTAATTTTGGTCAGT 382
consensus_13919#4      AAGAAGCATGTGGTGCAGGGTTGTGCAGGTTTTGGCCTGTCAGAGCTAATTCTAGTCAGT 256
consensus_13919#2      AAAAACCCT-TGGTTCAGGGTTTGCCAGTTTTTGCCCT-TTAGAACTAATTTTT-TCAGT 192
consensus_13919#3      NAGNNGCNTGTGGTNCAGNGTNGTGCAGNTTTTGGCCTNTCNGNGCTANTTCTNGTCNGT 302
consensus_13919#0      AAGAAGCATGTGGTGCAGGGTTGTGCAGGTTTTGGCCTGTCAGAGCTAATTCTAGTCAGT 897
consensus_13919#5      CGTGCAGCCATGCTCACTCACTCACCCACTCACTCACCAGTAGGACTGAGGAGCAAGCGA 216
                                 ** *           *   *      *     *  **           * 

consensus_13919#1      TTATGGCCGGGTGCC-TGGGCCAAGCCCTATAATGTTAGGATGGGAGTGATTCGGTTTTG 441
consensus_13919#4      TTATGGCTGGGTGCC-TGGGCCAAGCCCTACATTGCTAGGATGGGAGTGATTCGTTTTTG 315
consensus_13919#2      TTAAGGCTGGGTGCT-GGGCCCAAGCCCTATA-TGCTNGGGATGGAGTGATTCGTTTTTG 250
consensus_13919#3      TNNTGGCTGGGTGCCCTGGGCCAAGCCCTNNNTTGCTNGGNTGGGAGTGNTTCGTTTNTG 362
consensus_13919#0      TTATGGCTGGGTGCC-TGGGCCAAGCCCTATATTGCTAGGATGGGAGTGATTCGTTTTTG 956
consensus_13919#5      ATCCGG-TGAGCAAGTGCGTCGAGAACCAAGA--GGAGAGATGGGGGACACCGAGAGGAG 273
                           **  * *       * * *   **      *    *   ** *            *

consensus_13919#1      GTTTGTGCCGGCTAGGGTTAAGCGCATCATGTTCTGTTTGTAACTGGTGAAGCTTCCCCC 501
consensus_13919#4      TTTTGTGCTGGTTAGGGTTAAGCACATCATGTTCTGTTTGTAACTGGTGAAGCTGCCGCC 375
consensus_13919#2      -TTTGTGCTGGTANGGGTTAAGCACATCATGTTCTGTTTGTAACTGGTGAAGCTGCCGCC 309
consensus_13919#3      TTTTGTGCTGGTTAGGGTTNAGCACATCNTGTTCTGTTTGTNACTGGTGAAGCTGCCGCC 422
consensus_13919#0      TTTTGTGCTGGTTAGGGTTAAGCACATCATGTTCTGTTTGTAACTGGTGAAGCTGCCGCC 1016
consensus_13919#5      CTCTATACTGGTCCACATCTTGGTCATCGCCCTCTGCCT-CACCGCATTCNGCTTC--GC 330
                        * * * * **      *   *  ****    ****  *    *   *   *** *   *

consensus_13919#1      TAGAGCAACTTGGCAGGCTAGCAATTTGGTGTGTGTTGTAGTCTGTTGTAAGTCTATTGC 561
consensus_13919#4      TAGAGCAGCTTGGCAGGCTAGCAATTTGGTGTGTGTTGTAGTCTGTTGTAAGTCGATTGC 435
consensus_13919#2      TAGAGCAGCTGGGCAGGCTAGCAATNTGGTGTGTGTGNTAGTCTGTGTTAAGTCGATTGC 369
consensus_13919#3      TAGAGCNGCTTGGCAGGCTAGCANTTTGGTGTGTGTTGTAGTCTGTTGTAAGTCGATTGC 482
consensus_13919#0      TAGAGCAGCTTGGCAGGCTAGCAATTTGGTGTGTGTTGTAGTCTGTTGTAAGTCGATTGC 1076
consensus_13919#5      CATCGCCGCGGAGCGCCGCCGCAGCACGGGCTCAATTGTTACAGACA------------- 377
                        *  **  *   **      ***    **  *   *  *                     

consensus_13919#1      CTGTATTTTAAAAGGGTGCGCTAGAGAAGAGATGAATTTTCTGGTTTCAGTAATTTCCTG 621
consensus_13919#4      CTGTATTTTATTTGTGTGCGCTAGAGAAGAGATGAATCTGCTGGTTTCAGTAATTTCCTG 495
consensus_13919#2      CTGTATNTTATTTGTGTGCGCTAGAGAAGAGATGAATCTGCTGGTTTCAGTAGTTTCCTG 429
consensus_13919#3      CTGTATTTTATTTGTGTGCGCTAGAGAAGAGATGAATCTGCTGGTTTCAGTAATNTCCTG 542
consensus_13919#0      CTGTATTTTATTTGTGTGCGCTAGAGAAGAGATGAATCTGCTGGTTTCAGTAATTTCCTG 1136
consensus_13919#5      ------------------------------------------------------------
                                                                                   

consensus_13919#1      GCCAAGGTCTTCGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA------------ 669
consensus_13919#4      GCCAAGGACATCAATTTATTTGCTTTGGGGGATCAAAAAAAAAA---------------- 539
consensus_13919#2      GCCAAGGACATCAATTTATTTGCTTTGGGGGATCTGAGCCAATCTATAAAAATCCTATAT 489
consensus_13919#3      GCCAAGGACATCAATTTATTTGCTTTGGGGGATCTGAGCCAATCTATAAAAATCCTATAT 602
consensus_13919#0      GCCAAGGACATCAATTTATTTGCTTTGGGGGATCTGAGCCAATCTATAAAAATCCTATAT 1196
consensus_13919#5      ------------------------------------------------------------
                                                                                   

consensus_13919#1      ------------------------------------------------------------
consensus_13919#4      ------------------------------------------------------------
consensus_13919#2      TAGTGTGACCATTAGCTCGGATCGTGTGTAGCCACATCATCAATACTAGGCTGGCTGTTG 549
consensus_13919#3      TAGTGTNAAAAA------------------------------------------------ 614
consensus_13919#0      TAGTGTAAAAAA------------------------------------------------ 1208
consensus_13919#5      ------------------------------------------------------------
                                                                                   

consensus_13919#1      ------------------------------------------------------------
consensus_13919#4      ------------------------------------------------------------
consensus_13919#2      GATTTCATCTAAATGGCTGAAGAGAAGTGCTTGCAGCCCGACTGTTCCGTCTTCTATTAA 609
consensus_13919#3      ------------------------------------------------------------
consensus_13919#0      ------------------------------------------------------------
consensus_13919#5      ------------------------------------------------------------
                                                                                   

consensus_13919#1      --------------------------------------------------------
consensus_13919#4      --------------------------------------------------------
consensus_13919#2      TGATGTTATTTTCTTTATCTTAGTAATGGTGTTAATTGATGCCTCAAAAAAAAAAA 665
consensus_13919#3      --------------------------------------------------------
consensus_13919#0      --------------------------------------------------------
consensus_13919#5      --------------------------------------------------------