cluster # 13949

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Oryza sativa
cluster # 13949 cluster # 13949 Sequences # 14 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_13949#0 length = 1811 sequences # 12

consensus_13949#1 length = 821 sequences # 1
consensus_13949#2 length = 457 sequences # 1

consensusID : consensus_13949#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 12
consensus length = 1811
fasta sequence

                              [GCACTCCCTCTCCCACCACCACTCCACACCTGACACCACGCGGGCTGCCTCCATCGTCATCGATCCATCTCCGTATCTCTCACCGACCCCAAATCGCACAGCTCCAGCTCCTCCTCGATCCCCGTCGCGATCGGCGAGATGGCCACGGCGATCCCGCAGCGGCAGCTCTTCGTCGCCGGCGAGTGGCGCGCCCCCGCGCTCGGCCGCCGCCTCCCCGTCGTCAACCCCGCCACCGAGTCCCCCATCGGCGAGATCCCGGCGGGCACGGCGGAGGACGTGGACGCGGCGGTGGCGGCGGCGCGGGAGGCGCTGAAGAGGAACCGGGGCCGCGACTGGGCGCGCGCGCCGGGCGCCGTCCGGGCCAAGTACCTCCGCGCAATCGCGGCCAAGATAATCGAGAGGAAATCTGAGCTGGCTAGACTAGAGACGCTTGATTGTGGGAAGCCTCTTGATGAAGCAGCATGGGACATGGACGATGTTGCTGGATGCTTTGAGTACTTTGCAGATCTTGCAGAATCCTTGGACAAAAGGCAAAATGCACCTGTCTCTCTTCCAATGGAAAACTTTAAATGCTATCTTCGGAAAGAGCCTATCGGTGTAGTTGGGTTGATCACACCTTGGAACTATCCTCTCCTGATGGCAACATGGAAGGTAGCTCCTGCCCTGGCTGCTGGCTGTACAGCTGTACTAAAACCATCTGAATTGGCTTCCGTGACTTGTTTGGAGCTTGCTGATGTGTGTAAAGAGGTTGGTCTTCCTTCAGGTGTGCTAAACATAGTGACTGGATTAGGTTCTGAAGCCGGTGCTCCTTTGTCATCACACCCTGGTGTAGACAAGGTTGCATTTACTGGGAGTTATGAAACTGGTAAAAAGATTATGGCTTCAGCTGCTCCTATGGTTAAGCCTGTTTCACTGGAACTTGGTGGAAAAAGTCCTATAGTGGTGTTTGATGATGTTGATGTTGAAAAAGCTGTTGAGTGGACTCTCTTTGGTTGCTTTTGGACCAATGGCCA-GATTTGCAGTGCAACATCGCGTCTTATTCTTCATAAAAAAATCGCTAAAGAATTTCAAGAAAGGATGGTTGCATGGGCCAAAAATATTAAGGTGTCAGATCCACTTGAAGAGGGTTGCAGGCTTGGGCCCGTTGTTAGTGAAGGACA-GTATGAGAAGATTAAGCAATTTGTA-TCTACCGCCAAAAGCCAAGGTGCTACCATTCTGACT-GGTGGGG-TTAGACCCAAGCATCTGGAGAAAGGTTTCTATA-TTGAACCCACAATCATTACTGATGTCGATACATCAATGCAAATTTGGAGGGAAGAAGTTTTTGGTCCAGTGCTCTGTGTGAAAGAATTTAGCACTGAAGAAGAAGCCA-TTGAATTGGCCAACGATACTCATTATGGTCTGGCTGGTGCTGTGCTTTCCGGTGACCGCG-AGCGATGCCAGAGATTAACTGAGGAGATCGATGCCGG-AATTATCTGGGTGAACTGCT-CGCAACCCTGCTTCTGCCAAGCTCCAT-GGGGCGGGAACAAGCG-CAGCGGCTTTGGACGCGAGCTCGGAGAAGGGGGCATTGACAACTACCTAAGCGTCAAGCAAGTGACGGAGTACGCCTCCGATGAGCCGTGGGGATGGTACAAATCCCCTTCCAAGCTGTAATGTAATATGCGCATACGCATGACACGCCCATCTGTTCTGATCGTTTGGAATAAGAGGCCATAGTATGACGGGATGGACTTTGTGCATATCGATGTTTGATTTGCCATGTGCTGAGCCTGGAAATAAAAAAGGTTATAGTTGGAGACTAAAAAAAAAAAAAA]

[+] EMBL AK071221             [GCACTCCCTCTCCCACCACCACTCCACACCTGACACCACGCGGGCTGCCTCCATCGTCATCGATCCATCTCCGTATCTCTCACCGACCCCAAATCGCACAGCTCCAGCTCCTCCTCGATCCCCGTCGCGATCGGCGAGATGGCCACGGCGATCCCGCAGCGGCAGCTCTTCGTCGCCGGCGAGTGGCGCGCCCCCGCGCTCGGCCGCCGCCTCCCCGTCGTCAACCCCGCCACCGAGTCCCCCATCGGCGAGATCCCGGCGGGCACGGCGGAGGACGTGGACGCGGCGGTGGCGGCGGCGCGGGAGGCGCTGAAGAGGAACCGGGGCCGCGACTGGGCGCGCGCGCCGGGCGCCGTCCGGGCCAAGTACCTCCGCGCAATCGCGGCCAAGATAATCGAGAGGAAATCTGAGCTGGCTAGACTAGAGACGCTTGATTGTGGGAAGCCTCTTGATGAAGCAGCATGGGACATGGACGATGTTGCTGGATGCTTTGAGTACTTTGCAGATCTTGCAGAATCCTTGGACAAAAGGCAAAATGCACCTGTCTCTCTTCCAATGGAAAACTTTAAATGCTATCTTCGGAAAGAGCCTATCGGTGTAGTTGGGTTGATCACACCTTGGAACTATCCTCTCCTGATGGCAACATGGAAGGTAGCTCCTGCCCTGGCTGCTGGCTGTACAGCTGTACTAAAACCATCTGAATTGGCTTCCGTGACTTGTTTGGAGCTTGCTGATGTGTGTAAAGAGGTTGGTCTTCCTTCAGGTGTGCTAAACATAGTGACTGGATTAGGTTCTGAAGCCGGTGCTCCTTTGTCATCACACCCTGGTGTAGACAAGGTTGCATTTACTGGGAGTTATGAAACTGGTAAAAAGATTATGGCTTCAGCTGCTCCTATGGTTAAGCCTGTTTCACTGGAACTTGGTGGAAAAAGTCCTATAGTGGTGTTTGATGATGTTGATGTTGAAAAAGCTGTTGAGTGGACTCTCTTTGGTTGCTTTTGGACCAATGGCCATGATTTGCAGTGCAACATCGCGTCTTATTCTTCATAAAAAAATCGCTAAAGAATTTCAAGAAAGGATGGTTGCATGGGCCAAAAATATTAAGGTGTCAGATCCACTTGAAGAGGGTTGCAGGCTTGGGCCCGTTGTTAGTGAAGGACA GTATGAGAAGATTAAGCAATTTGTA TCTACCGCCAAAAGCCAAGGTGCTACCATTCTGACT GGTGGGG TTAGACCCAAGCATCTGGAGAAAGGTTTCTATA TTGAACCCACAATCATTACTGATGTCGATACATCAATGCAAATTTGGAGGGAAGAAGTTTTTGGTCCAGTGCTCTGTGTGAAAGAATTTAGCACTGAAGAAGAAGCCA TTGAATTGGCCAACGATACTCATTATGGTCTGGCTGGTGCTGTGCTTTCCGGTGACCGCG AGCGATGCCAGAGATTAACTGAGGAGATCGATGCCGG AATTATCTGGGTGAACTGCT CGCAACCCTGCTTCTGCCAAGCTCCAT GGGGCGGGAACAAGCG CAGCGGCTTTGGACGCGAGCTCGGAGAAGGGGGCATTGACAACTACCTAAGCGTCAAGCAAGTGACGGAGTACGCCTCCGATGAGCCGTGGGGATGGTACAAATCCCCTTCCAAGCTGTAATGTAATATGCGCATACGCATGACACGCCCATCTGTTCTGATCGTTTGGAATAAGAGGCCATAGTATGACGGGATGGACTTTGTGCATATCGATGTTTGATTTGCCATGTGCTGAGCCTGGAAATAAAAAAGGTTATA                        ]
[+] EMBL CB655655             [                CACCACTCCACACCTGACACCACGCGGGCTGCCTCCATCGTCATCGATCCATCTCCGTATCTCTCACCGACCCCAAATCGCACAGCTCCAGCTCCTCCTCGATCCCCGTCGCGATCGGCGAGATGGCCACGGCGATCCCGCAGCGGCAGCTCTTCGTCGCCGGCGAGTGGCGCGCCCCCGCGCTCGGCCGCCGCCTCCCCGTCGTCAACCCCGCCACCGAGTCCCCCATCGGCGAGATCCCGGCGGGCACGGCGGAGGACGTGGACGCGGCGGTGGCGGCGGCGCGGGAGGCGCTGAAGAGGAACCGGGGCCGCGACTGGGCGCGCGCGCCGGGCGCCGTCCGGGCCAAGTACCTCCGCGCAATCGCGGCCAAGATAATCGAGAGGAAATCTGAGCTGGCTAGACTAGAGACGCTTGATTGTGGGAAGCCTCTTGATGAAGCAGCATGGGACATGGACGATGTTGCTGGATGCTTTGAGTACTTTGCAGATCTTGCAGAATCCTTGGACAAAAGGCAAAATGCACCTGTCTCTCTTCCAATGGAAAACTTTAAATGCTATCTTCGGAAAGAGCCTATCGGTGTAGTTGGGTTGATCACACCTTGGAACTATCCTCTCCTGATGGCAACATGGAAGGTAGCTCCTGCCCTGGCTGCTGGCTGTACAGCTGTACTANAACCATCTGAATTGGCTTCCGTGACTTGTTTGGAGCTTGCTGATGTGTGTAAAGAGGTTGGTCTTCCTTCAGGTGTGCTAAACATAGTGACTGGATTAGGTTCTGAAGCCGGTGCTCCTTTGTCATCACACCCTGGTGTAGACAAGtt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CB649658             [                                                                                                              CTCCTCGATCCCCGTCGCGATCGGCGAGATGGCCACGGCGATCCCGCAGCGGCAGCTCTTCGTCGCCGGCGAGTGGCGCGCCCCCGCGCTCGGCCGCCGCCTCCCCGTCGTCAACCCCGCCACCGAGTCCCCCATCGGCGAGATCCCGGCGGGCACGGCGGAGGACGTGGACGCGGCGGTGGCGGCGGCGCGGGAGGCGCTGAAGAGGAACCGGGGCCGCGACTGGGCGCGCGCGCCGGGCGCCGTCCGGGCCAAGTACCTCCGCGCAATCGCGGCCAAGATAATCGAGAGGAAATCTGAGCTGGCTAGACTAGAGACGCTTGATTGTGGGAAGCCTCTTGATGAAGCAGCATGGGACATGGACGATGTTGCTGGATGCTTTGAGTACTTTGCAGATCTTGCAGAATCCTTGGACAAAAGGCAAAATGCACCTGTCTCTCTTCCAATGGAAAACTTTAAATGCTATCTTCGGAAAGAGCCTATCGGTGTAGTTGGGTTGATCACACCTTGGAACTATCCTCTCCTGATGGCAACATGGAAGGTAGCTCCTGCCCTGGCTGCTGGCTGTACAGCTGTACTAAAACCATCTGAATTGGCTTCCGTGACTTGTTTGGAGCTTGCTGATGTGTGTAAAGAGGTTGGTCTTCCTTCAGGTGTGCTAAACATAGTGACTGGATTAGGTTCTGAAGCCGGTGCTCCTTTGTCATCACACCCTGGTGTAGACAAGGTTGCATTTACTGGGAGTTATGANACTGGTAAAAAGATTATGGCTTCAGCTGCTCCTATGGTTAAGCCTGTTTCACTGGAACTTGGTGG AAAAGTCCTATAGTGGTGTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AB096083             [                                                                                                                                                   GCGATCCCGCAGCGGCAGCTCTTCGTCGCCGGCGAGTGGCGCGCCCCCGCGCTCGGCCGCCGCCTCCCCGTCGTCAACCCCGCCACCGAGTCCCCCATCGGCGAGATCCCGGCGGGCACGGCGGAGGACGTGGACGCGGCGGTGGCGGCGGCGCGGGAGGCGCTGAAGAGGAACCGGGGCCGCGACTGGGCGCGCGCGCCGGGCGCCGTCCGGGCCAAGTACCTCCGCGCAATCGCGGCCAAGATAATCGAGAGGAAATCTGAGCTGGCTAGACTAGAGACGCTTGATTGTGGGAAGCCTCTTGATGAAGCAGCATGGGACATGGACGATGTTGCTGGATGCTTTGAGTACTTTGCAGATCTTGCAGAATCCTTGGACAAAAGGCAAAATGCACCTGTCTCTCTTCCAATGGAAAACTTTAAATGCTATCTTCGGAAAGAGCCTATCGGTGTAGTTGGGTTGATCACACCTTGGAACTATCCTCTCCTGATGGCAACATGGAAGGTAGCTCCTGCCCTGGCTGCTGGCTGTACAGCTGTACTAAAACCATCTGAATTGGCTTCCGTGACTTGTTTGGAGCTTGCTGATGTGTGTAAAGAGGTTGGTCTTCCTTCAGGTGTGCTAAACATAGTGACTGGATTAGGTTCTGAAGCCGGTGCTCCTTTGTCATCACACCCTGGTGTAGACAAGGTTGCATTTACTGGGAGTTATGAAACTGGTAAAAAGATTATGGCTTCAGCTGCTCCTATGGTTAAGCCTGTTTCACTGGAACTTGGTGGAAAAAGTCCTATAGTGGTGTTTGATGATGTTGATGTTGAAAAAGCTGTTGAGTGGACTCTCTTTGGTTGCTTTTGGACCAATGGCCA GATTTGCAGTGCAACATCGCGTCTTATTCTTCATAAAAAAATCGCTAAAGAATTTCAAGAAAGGATGGTTGCATGGGCCAAAAATATTAAGGTGTCAGATCCACTTGAAGAGGGTTGCAGGCTTGGGCCCGTTGTTAGTGAAGGACA GTATGAGAAGATTAAGCAATTTGTA TCTACCGCCAAAAGCCAAGGTGCTACCATTCTGACT GGTGGGG TTAGACCCAAGCATCTGGAGAAAGGTTTCTATA TTGAACCCACAATCATTACTGATGTCGATACATCAATGCAAATTTGGAGGGAAGAAGTTTTTGGTCCAGTGCTCTGTGTGAAAGAATTTAGCACTGAAGAAGAAGCCA TTGAATTGGCCAACGATACTCATTATGGTCTGGCTGGTGCTGTGCTTTCCGGTGACCGCG AGCGATGCCAGAGATTAACTGAGGAGATCGATGCCGG AATTATCTGGGTGAACTGCT CGCAACCCTGCTTCTGCCAAGCTCCAT GGGGCGGGAACAAGCG CAGCGGCTTTGGACGCGAGCTCGGAGAAGGGGGCATTGACAACTACCTAAGCGTCAAGCAAGTGACGGAGTACGCCTCCGATGAGCCGTGGGGATGGTACAAATCCCCTTC                                                                                                                                                                           ]
[+] EMBL AK060461             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TTTGAGTACTTTGCAGATCTTGCAGAATCCTTGGACAAAAGGCAAAATGCACCTGTCTCTCTTCCAATGGAAAACTTTAAATGCTATCTTCGGAAAGAGCCTATCGGTGTAGTTGGGTTGATCACACCTTGGAACTATCCTCTCCTGATGGCAACATGGAAGGTAGCTCCTGCCCTGGCTGCTGGCTGTACAGCTGTACTAAAACCATCTGAATTGGCTTCCGTGACTTGTTTGGAGCTTGCTGATGTGTGTAAAGAGGTTGGTCTTCCTTCAGGTGTGCTAAACATAGTGACTGGATTAGGTTCTGAAGCCGGTGCTCCTTTGTCATCACACCCTGGTGTAGACAAGGTTGCATTTACTGGGAGTTATGAAACTGGTAAAAAGATTATGGCTTCAGCTGCTCCTATGGTTAAGCCTGTTTCACTGGAACTTGGTGGAAAAAGTCCTATAGTGGTGTTTGATGATGTTGATGTTGAAAAAGCTGTTGAGTGGACTCTCTTTGGTTGCTTTTGGACCAATGGCCA GATTTGCAGCGCAACATCGCGTCTTATTCTTCATAAAAAAATCGCTAAAGAATTTCAAGAAAGGATGGTTGCATGGGCCAAAAATATTAAGGTGTCAGATCCACTTGAAGAGGGTTGCAGGCTTGGGCCCGTTGTTAGTGAAGGACA GTATGAGAAGATTAAGCAATTTGTA TCTACCGCCAAAAGCCAAGGTGCTACCATTCTGACT GGTGGGG TTAGACCCAAGCATCTGGAGAAAGGTTTCTATA TTGAACCCACAATCATTACTGATGTCGATACATCAATGCAAATTTGGAGGGAAGAAGTTTTTGGTCCAGTGCTCTGTGTGAAAGAATTTAGCACTGAAGAAGAAGCCA TTGAATTGGCCAACGATACTCATTATGGTCTGGCTGGTGCTGTGCTTTCCGGTGACCGCG AGCGATGCCAGAGATTAACTGAGGAGATCGATGCCGG AATTATCTGGGTGAACTGCT CGCAACCCTGCTTCTGCCAAGCTCCAT GGGGCGGGAACAAGCG CAGCGGCTTTGGACGCGAGCTCGGAGAAGGGGGCATTGACAACTACCTAAGCGTCAAGCAAGTGACGGAGTACGCCTCCGATGAGCCGTGGGGATGGTACAAATCCCCTTCCAAGCTGTAATGTAATATGCGCATACGCATGACACGCCCATCTGTTCTGATCGTTTGGAATAAGAGGCCATAGTATGACGGGATGGACTTTGTGCATATCGATGTTTGATTTGCCATGTGCTGAGCCTGGAAATAAAAAAGGTTATA                        ]
[+] EMBL CF329625             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TCTTCCTTCAGGTGTGCTAAACATAGTGACTGGATTAGGTTCTGAAGCCGGTGCTCCTTTGTCATCACACCCTGGTGTAGACAAGGTTGCATTTACTGGGAGTTATGAAACTGGTAAAAAGATTATGGCTTCAGCTGCTCCTATGGTTAAGCCTGTTTCACTGGAACTTGGTGGAAAAAGTCCTATAGTGGTGTTTGATGATGTTGATGTTGAAAAAGCTGTTGAGTGGACTCTCTTTGGTTGCTTTTGGACCAATGGCCA GATTTGCAGTGCAACATCGCGTCTTATTCTTCATAAAAAAATCGCTAAAGAATTTCAAGAAAGGATGGTTGCATGGGCCAAAAATATTAAGGTGTCAGATCCACTTGAAGAGGGTTGCAGGCTTGGGCCCGTTGTTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CF311479             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CCTTTGTCATCACACCCTGGTGTAGACAAGGTTGCATTTACTGGGAGTTATGAAACTGGTAAAAAGATTATGGCTTCAGCTGCTCCTATGGTTAAGCCTGTTTCACTGGAACTTGGTGGAAAAAGTCCTATAGTGGTGTTTGATGATGTTGATGTTGAAAAAGCTGTTGAGTGGACTCTCTTTGGTTGCTTTTGGACCAATGGCCA GATTTGCAGTGCAACATCGCGTCTTATTCTTCATAAAAAAATCGCTAAAGAATTTCAAGAAAGGATGGTTGCATGGGCCAAAAATATTAAGGTGTCAGATCCACTTGAAGAGGGTTGCAGGCTTGGGCCCGTTGTTAGTGAAGGACA GTATGAGAAGATTAAGCAATTTGTA TCTACCGCCAAAAGCCAAGGTGCTACCATTCTGACTGGGTGGGG TTAGACCCAAGCATCTGGAGAAAGGTTTCTATA TTGAACCCACAATCATTACTGATGTCGATACATCAATGCAAATTTGGAGGGAAGAAGTTTTTGGTCCAGTGCTCTGTGTGAAAGAATTTAGCACTGAAGAAGAAGCCA TTGAATTGGCCAACGATACTCATTAT                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CB655656             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TGCAGTGCAACATCGCGTCTTATTCTTCATAAAAAAATCGCTAAAGAATTTCAAGAAAGGATGGTTGCATGGGCCAAAAATATTAAGGTGTCAGATCCACTTGAAGAGGGTTGCAGGCTTGGGCCCGTTGTTAGTGAAGGACA GTATGAGAAGATTAAGCAATTTGTA TCTACCGCCAAAAGCCAAGGTGCTACCATTCTGACT GGTGGGG TTAGACCCAAGCATCTGGAGAAAGGTTTCTATA TTGAACCCACAATCATTACTGATGTCGATACATCAATGCAAATTTGGAGGGAAGAAGTTTTTGGTCCAGTGCTCTGTGTGAAAGAATTTAGCACTGAAGAAGAAGCCA TTGAATTGGCCAACGATACTCATTATGGTCTGGCTGGTGCTGTGCTTTCCGGTGACCGCG AGCGATGCCAGAGATTAACTGAGGAGATCGATGCCGG AATTATCTGGGTGAACTGCT CGCAACCCTGCTTCTGCCAAGCTCCAT GGGGCGGGAACAAGCG CAGCGGCTTTGGACGCGAGCTCGGAGAAGGGGGCATTGACAACTACCTAAGCGTCAAGCAAGTGACGGAGTACGCCTCCGATGAGCCGTGGGGATGGTACAAATCCCCTTCCAAGCTGTAATGTAATATGCGCATACGCATGACACGCCCATCTGTTCTGATCGTTTGGAATAAGAGGCCATAGTATGACGGGATGGACTTTGTGCATATCGATGTTTGATTTGCCATGTGGGGAGCCTGGAAATAAAAAAGGTTATAGTTGGAGA  AAAAAAgga     ]
[+] EMBL BM037922             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 AAAGGATGG TCCATGGCCCAAAA    TAAGG GTCAGAT CAC TGAAGAGGG TCCA GCT   GCC  TTGTTTATTAAGGACATGTAT AG AGATTA  CAATTGGTATTCNACCCCCCTAAACCCAGGTGCTACCATTCTGACT GGTGGGGTTTAGACCCAAGCATCTGGAGAAAGGTTTCTATAGTTGAACCCAC ATCATTACTGATGTCGATACATCAATGC AATTTGGAGGGAAGAAGTTTTTGGTCCAGTGCTCTGTGTGAAAGAATTTAGCACTGAAGAAGAAGCCACTTGAATT GCCAACGATACTCATTATGGTCT GCTGGTGCTGTGCTTTCCGGTGACCGCG AGCGATGCCAGAGATTAACTGAGGAGATCGATGCCGG AATTATCTGGGTGAACTGCT CGCAACCCTGCTTCTGCCAAGCTCCAT GGGGCGGGAACAAGCGCCAGCGGCTTTGGACGCGAGCTCGGAGAAGGGGGCATTGACAACTACCTAAGCGTCAAGCAAGTGACGGAGTACGCCTCCGATGAGCCGTGGGGATGGTACAAATCCCCTTCCCAGCTGTAATGTAATATGCGCATACGCATGACACGCCCATCTGTTCTGATCGTTTGGAATAAGAGGCCATAGTATGACGGGATGGACTTTGTGCATATCGATGTTTGATTTGCCATGTGCTGAGCCTGGAAATAAAAAAGGTTATAGTTGGAGACTAAAAAAAA      ]
[+] EMBL OSC110               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CATGGGCCAAAAATATTAAGGTGTCAGATCCACTTGAAGAGGGTTGCAGGCTTGGGCCCGTTGTTAGTGAAGGACA GTATGAGAAGATTAAGCAATTTGTA TCTACCGCCAAAAGCCAAGGTGCTACCATTCTGACT GGTGGGG TTAGACCCAAGCATCTGGAGAAAGGTTTCTATA TTGANCCCACAATCATTACTGATGTCGATACATCAATGCAAATTTGGAGGGAAGAAGTTTTTGGTCCAGTGCTCTGTGTGAAAGANTTTAGCACTGAAGAAGAAGCCA TTGANTTGGCCAACGATACTCATTATGGTCTGGCTGGTGCTGTGCTTTCCGGTGACCGCGAAGCGATGCCAGAGATTAACTGAGGAGATCGATGCCGG AATTATCTGGGTGACCTGCT CG AANCCTGCTTCTGCCAAGCTCCATGGGGGCGGGGAC                                                                                                                                                                                                                                                                                                ]
[-] EMBL CF311480             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TGTCGATACATCAATGCAAATTTGGAGGGAAGAAGTTTTTGGTCCAGTGCTCTGTGTGAAAGAATTTAGCACTGAAGAAGAAGCCA TTGAATTGGCCAACGATACTCATTATGGTCTGGCTGGTGCTGTGCTTTCCGGTGACCGCG AGCGATGCCAGAGATTAACTGAGGAGATCGATGCCGG AATTATCTGGGTGAACTGCT CGCAACCCTGCTTCTGCCAAGCTCCAT GGGGCGGGAACAAGCG CAGCGGCTTTGGACGCGAGCTCGGAGAAGGGGGCATTGACAACTACCTAAGCGTCAAGCAAGTGACGGAGTACGCCTCCGATGAGCCGTGGGGATGGTACAAATCCCCTTCCAAGCTGTAATGTAATATGCGCATACGCATGACACGCCCATCTGTTCTGATCGTTTGGAATAAGAGGCCATAGTATGACGGGATGGACTTTGTGCATATCGATGTTTGATTTGCCATGTGCTGAGCCTGGAAATAAAAAAGGTTATAGTTGGAGACTAAAAAAAAAAAAAA]
[+] EMBL C98989               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TGCCGGAAATTATCTGGGTGAACTGCTCCGCAACCCTGCTTCTGCCAAGCTCCAT GGGGCGGGAACAAGCG CANCGGCTTTGGACGCGAGCTCGNAGAAGGGGGCATTGACAACTACCTAAGCGTCAAGCAAGTGACGGAGTACGCCTCCGATGAGCCGTGGGGATGGTACAAATCCCCTTCCAAGCTGTAATGTAATATGCGCATACGCATGACACGCCCATCTGTTCTGATCGTTTGGAATAAGAGGCCATAGTATGACGGGATGGACTTTGTGCATATCGATGTTTGATTTGCCATGTGCTGAGCCTGGAAATAAAAAAGGTTATAGTTGGAGACTAAAAA         ]




>consensus_13949#0
GCACTCCCTCTCCCACCACCACTCCACACCTGACACCACGCGGGCTGCCTCCATCGTCAT
CGATCCATCTCCGTATCTCTCACCGACCCCAAATCGCACAGCTCCAGCTCCTCCTCGATC
CCCGTCGCGATCGGCGAGATGGCCACGGCGATCCCGCAGCGGCAGCTCTTCGTCGCCGGC
GAGTGGCGCGCCCCCGCGCTCGGCCGCCGCCTCCCCGTCGTCAACCCCGCCACCGAGTCC
CCCATCGGCGAGATCCCGGCGGGCACGGCGGAGGACGTGGACGCGGCGGTGGCGGCGGCG
CGGGAGGCGCTGAAGAGGAACCGGGGCCGCGACTGGGCGCGCGCGCCGGGCGCCGTCCGG
GCCAAGTACCTCCGCGCAATCGCGGCCAAGATAATCGAGAGGAAATCTGAGCTGGCTAGA
CTAGAGACGCTTGATTGTGGGAAGCCTCTTGATGAAGCAGCATGGGACATGGACGATGTT
GCTGGATGCTTTGAGTACTTTGCAGATCTTGCAGAATCCTTGGACAAAAGGCAAAATGCA
CCTGTCTCTCTTCCAATGGAAAACTTTAAATGCTATCTTCGGAAAGAGCCTATCGGTGTA
GTTGGGTTGATCACACCTTGGAACTATCCTCTCCTGATGGCAACATGGAAGGTAGCTCCT
GCCCTGGCTGCTGGCTGTACAGCTGTACTAAAACCATCTGAATTGGCTTCCGTGACTTGT
TTGGAGCTTGCTGATGTGTGTAAAGAGGTTGGTCTTCCTTCAGGTGTGCTAAACATAGTG
ACTGGATTAGGTTCTGAAGCCGGTGCTCCTTTGTCATCACACCCTGGTGTAGACAAGGTT
GCATTTACTGGGAGTTATGAAACTGGTAAAAAGATTATGGCTTCAGCTGCTCCTATGGTT
AAGCCTGTTTCACTGGAACTTGGTGGAAAAAGTCCTATAGTGGTGTTTGATGATGTTGAT
GTTGAAAAAGCTGTTGAGTGGACTCTCTTTGGTTGCTTTTGGACCAATGGCCAGATTTGC
AGTGCAACATCGCGTCTTATTCTTCATAAAAAAATCGCTAAAGAATTTCAAGAAAGGATG
GTTGCATGGGCCAAAAATATTAAGGTGTCAGATCCACTTGAAGAGGGTTGCAGGCTTGGG
CCCGTTGTTAGTGAAGGACAGTATGAGAAGATTAAGCAATTTGTATCTACCGCCAAAAGC
CAAGGTGCTACCATTCTGACTGGTGGGGTTAGACCCAAGCATCTGGAGAAAGGTTTCTAT
ATTGAACCCACAATCATTACTGATGTCGATACATCAATGCAAATTTGGAGGGAAGAAGTT
TTTGGTCCAGTGCTCTGTGTGAAAGAATTTAGCACTGAAGAAGAAGCCATTGAATTGGCC
AACGATACTCATTATGGTCTGGCTGGTGCTGTGCTTTCCGGTGACCGCGAGCGATGCCAG
AGATTAACTGAGGAGATCGATGCCGGAATTATCTGGGTGAACTGCTCGCAACCCTGCTTC
TGCCAAGCTCCATGGGGCGGGAACAAGCGCAGCGGCTTTGGACGCGAGCTCGGAGAAGGG
GGCATTGACAACTACCTAAGCGTCAAGCAAGTGACGGAGTACGCCTCCGATGAGCCGTGG
GGATGGTACAAATCCCCTTCCAAGCTGTAATGTAATATGCGCATACGCATGACACGCCCA
TCTGTTCTGATCGTTTGGAATAAGAGGCCATAGTATGACGGGATGGACTTTGTGCATATC
GATGTTTGATTTGCCATGTGCTGAGCCTGGAAATAAAAAAGGTTATAGTTGGAGACTAAA
AAAAAAAAAAA

consensusID : consensus_13949#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 821
fasta sequence

                              [AGGATGGTTGCATGGGCCAAAAATATTAAGGTGTCAGATCCACTTGAAGAGGGTTGCAGGCTTGGGCCCGTTGTTAGTGAAGGACAGTATGAGAAGATTAAGCAATTTGTATCTACCGCCAAAAGCCAAGGTGCTACCATTCTGACTGGTGGGGTTAGACCCAAGCATCTGGAGAAAGGTTTCTATATTGAACCCACAATCATTACTGATGTCGATACATCAATGCAAATTTGGAGGGAAGAAGTTTTTGGTCCAGTGCTCTGTGTGAAAGAATTTAGCACTGAAGAAGAAGCCATTGAATTGGCCAACGATACTCATTATGGTCTGGCTGGTGCTGTGCTTTCCGGTGACCGCGAGCGATGCCAGAGATTAACTGAGGAGATCGATGCCGGAATTATCTGGGCGAACTGCTCGCAACCCTGCTTCTGCCAAGCTCCATGGGGCGGGAACAAGCGCAGCGGCTTTGGACGCGAGCTCGGAGAAGGGGGCATTGACAACTACCTAAGCGTCAAGCAAGTGACGGAGTACGCCTCCGATGAGCCGTGGGGATGGTACAAATCCCCTTCCAAGCTGTAATGTAATATGCGCATACGCATGACACGCCCATCTGTTCTGATCGTTTGGAATAAGAGGCCATAGTATGTCGGGATGGACTTTGTGCATATCGATGTTTGATTTGCCATGTGCTGAGCCTGGAAATAAAAAAGGTTATAGTTGGAGACTTGTGAGAGTTGTACGACTTGTACTGATGGTTACGCGACAATTTGTGCATGGATAGTTTGTGTGCTTGTACCGGGGTTCTCTCCGTAAACAAAAAAAGG]

[-] EMBL CB649659             [AGGATGGTTGCATGGGCCAAAAATATTAAGGTGTCAGATCCACTTGAAGAGGGTTGCAGGCTTGGGCCCGTTGTTAGTGAAGGACAGTATGAGAAGATTAAGCAATTTGTATCTACCGCCAAAAGCCAAGGTGCTACCATTCTGACTGGTGGGGTTAGACCCAAGCATCTGGAGAAAGGTTTCTATATTGAACCCACAATCATTACTGATGTCGATACATCAATGCAAATTTGGAGGGAAGAAGTTTTTGGTCCAGTGCTCTGTGTGAAAGAATTTAGCACTGAAGAAGAAGCCATTGAATTGGCCAACGATACTCATTATGGTCTGGCTGGTGCTGTGCTTTCCGGTGACCGCGAGCGATGCCAGAGATTAACTGAGGAGATCGATGCCGGAATTATCTGGGCGAACTGCTCGCAACCCTGCTTCTGCCAAGCTCCATGGGGCGGGAACAAGCGCAGCGGCTTTGGACGCGAGCTCGGAGAAGGGGGCATTGACAACTACCTAAGCGTCAAGCAAGTGACGGAGTACGCCTCCGATGAGCCGTGGGGATGGTACAAATCCCCTTCCAAGCTGTAATGTAATATGCGCATACGCATGACACGCCCATCTGTTCTGATCGTTTGGAATAAGAGGCCATAGTATGTCGGGATGGACTTTGTGCATATCGATGTTTGATTTGCCATGTGCTGAGCCTGGAAATAAAAAAGGTTATAGTTGGAGACTTGTGAGAGTTGTACGACTTGTACTGATGGTTACGCGACAATTTGTGCATGGATAGTTTGTGTGCTTGTACCGGGGTTCTCTCCGTAAACAAAAAAAGG]




>consensus_13949#1
AGGATGGTTGCATGGGCCAAAAATATTAAGGTGTCAGATCCACTTGAAGAGGGTTGCAGG
CTTGGGCCCGTTGTTAGTGAAGGACAGTATGAGAAGATTAAGCAATTTGTATCTACCGCC
AAAAGCCAAGGTGCTACCATTCTGACTGGTGGGGTTAGACCCAAGCATCTGGAGAAAGGT
TTCTATATTGAACCCACAATCATTACTGATGTCGATACATCAATGCAAATTTGGAGGGAA
GAAGTTTTTGGTCCAGTGCTCTGTGTGAAAGAATTTAGCACTGAAGAAGAAGCCATTGAA
TTGGCCAACGATACTCATTATGGTCTGGCTGGTGCTGTGCTTTCCGGTGACCGCGAGCGA
TGCCAGAGATTAACTGAGGAGATCGATGCCGGAATTATCTGGGCGAACTGCTCGCAACCC
TGCTTCTGCCAAGCTCCATGGGGCGGGAACAAGCGCAGCGGCTTTGGACGCGAGCTCGGA
GAAGGGGGCATTGACAACTACCTAAGCGTCAAGCAAGTGACGGAGTACGCCTCCGATGAG
CCGTGGGGATGGTACAAATCCCCTTCCAAGCTGTAATGTAATATGCGCATACGCATGACA
CGCCCATCTGTTCTGATCGTTTGGAATAAGAGGCCATAGTATGTCGGGATGGACTTTGTG
CATATCGATGTTTGATTTGCCATGTGCTGAGCCTGGAAATAAAAAAGGTTATAGTTGGAG
ACTTGTGAGAGTTGTACGACTTGTACTGATGGTTACGCGACAATTTGTGCATGGATAGTT
TGTGTGCTTGTACCGGGGTTCTCTCCGTAAACAAAAAAAGG

consensusID : consensus_13949#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 457
fasta sequence

                              [TGGCTGGTGCTGTGCTTTCCGGTGACCGCGAGCGATGCCAGATATTAACTGAGGAGATCGATGCCGGAATTATCTGGGTGAACTGCTCGCAACCCTGCTTTTGCCAAGCTCCATGGGGCGGGAACAAGCGCAGCGGCTTTGGACGCGAGCTCGGAGAAGGGGGCATTGACAACTACCTAAGCGTCAAGCAAGTGACGGAGTACGCCTCCGATGAGCCGTGGGGATGGTACAAATCCCCTTCCAAGCTGTAATGTAATATGCGCATACGCATGACACGCCCATCTGTTCTGATCGTTTGGAATAAGAGGCCATAGTATGACGGGATGGACTTTGTGCATATCGATGTTTGATTTGCCATGTGCTGAGCCTGGAAATAAAAAAGGTTATAGTTGGAGACTTGTGAGAGTTGTACGACTTGTACTGATGGTTACGCGACAATTTGTGCAAAAAAAAAAAA]

[-] EMBL CF329626             [TGGCTGGTGCTGTGCTTTCCGGTGACCGCGAGCGATGCCAGATATTAACTGAGGAGATCGATGCCGGAATTATCTGGGTGAACTGCTCGCAACCCTGCTTTTGCCAAGCTCCATGGGGCGGGAACAAGCGCAGCGGCTTTGGACGCGAGCTCGGAGAAGGGGGCATTGACAACTACCTAAGCGTCAAGCAAGTGACGGAGTACGCCTCCGATGAGCCGTGGGGATGGTACAAATCCCCTTCCAAGCTGTAATGTAATATGCGCATACGCATGACACGCCCATCTGTTCTGATCGTTTGGAATAAGAGGCCATAGTATGACGGGATGGACTTTGTGCATATCGATGTTTGATTTGCCATGTGCTGAGCCTGGAAATAAAAAAGGTTATAGTTGGAGACTTGTGAGAGTTGTACGACTTGTACTGATGGTTACGCGACAATTTGTGCAAAAAAAAAAAA]




>consensus_13949#2
TGGCTGGTGCTGTGCTTTCCGGTGACCGCGAGCGATGCCAGATATTAACTGAGGAGATCG
ATGCCGGAATTATCTGGGTGAACTGCTCGCAACCCTGCTTTTGCCAAGCTCCATGGGGCG
GGAACAAGCGCAGCGGCTTTGGACGCGAGCTCGGAGAAGGGGGCATTGACAACTACCTAA
GCGTCAAGCAAGTGACGGAGTACGCCTCCGATGAGCCGTGGGGATGGTACAAATCCCCTT
CCAAGCTGTAATGTAATATGCGCATACGCATGACACGCCCATCTGTTCTGATCGTTTGGA
ATAAGAGGCCATAGTATGACGGGATGGACTTTGTGCATATCGATGTTTGATTTGCCATGT
GCTGAGCCTGGAAATAAAAAAGGTTATAGTTGGAGACTTGTGAGAGTTGTACGACTTGTA
CTGATGGTTACGCGACAATTTGTGCAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13949#1      ------------------------------------------------------------
consensus_13949#2      ------------------------------------------------------------
consensus_13949#0      GCACTCCCTCTCCCACCACCACTCCACACCTGACACCACGCGGGCTGCCTCCATCGTCAT 60
                                                                                   

consensus_13949#1      ------------------------------------------------------------
consensus_13949#2      ------------------------------------------------------------
consensus_13949#0      CGATCCATCTCCGTATCTCTCACCGACCCCAAATCGCACAGCTCCAGCTCCTCCTCGATC 120
                                                                                   

consensus_13949#1      ------------------------------------------------------------
consensus_13949#2      ------------------------------------------------------------
consensus_13949#0      CCCGTCGCGATCGGCGAGATGGCCACGGCGATCCCGCAGCGGCAGCTCTTCGTCGCCGGC 180
                                                                                   

consensus_13949#1      ------------------------------------------------------------
consensus_13949#2      ------------------------------------------------------------
consensus_13949#0      GAGTGGCGCGCCCCCGCGCTCGGCCGCCGCCTCCCCGTCGTCAACCCCGCCACCGAGTCC 240
                                                                                   

consensus_13949#1      ------------------------------------------------------------
consensus_13949#2      ------------------------------------------------------------
consensus_13949#0      CCCATCGGCGAGATCCCGGCGGGCACGGCGGAGGACGTGGACGCGGCGGTGGCGGCGGCG 300
                                                                                   

consensus_13949#1      ------------------------------------------------------------
consensus_13949#2      ------------------------------------------------------------
consensus_13949#0      CGGGAGGCGCTGAAGAGGAACCGGGGCCGCGACTGGGCGCGCGCGCCGGGCGCCGTCCGG 360
                                                                                   

consensus_13949#1      ------------------------------------------------------------
consensus_13949#2      ------------------------------------------------------------
consensus_13949#0      GCCAAGTACCTCCGCGCAATCGCGGCCAAGATAATCGAGAGGAAATCTGAGCTGGCTAGA 420
                                                                                   

consensus_13949#1      ------------------------------------------------------------
consensus_13949#2      ------------------------------------------------------------
consensus_13949#0      CTAGAGACGCTTGATTGTGGGAAGCCTCTTGATGAAGCAGCATGGGACATGGACGATGTT 480
                                                                                   

consensus_13949#1      ------------------------------------------------------------
consensus_13949#2      ------------------------------------------------------------
consensus_13949#0      GCTGGATGCTTTGAGTACTTTGCAGATCTTGCAGAATCCTTGGACAAAAGGCAAAATGCA 540
                                                                                   

consensus_13949#1      ------------------------------------------------------------
consensus_13949#2      ------------------------------------------------------------
consensus_13949#0      CCTGTCTCTCTTCCAATGGAAAACTTTAAATGCTATCTTCGGAAAGAGCCTATCGGTGTA 600
                                                                                   

consensus_13949#1      ------------------------------------------------------------
consensus_13949#2      ------------------------------------------------------------
consensus_13949#0      GTTGGGTTGATCACACCTTGGAACTATCCTCTCCTGATGGCAACATGGAAGGTAGCTCCT 660
                                                                                   

consensus_13949#1      ------------------------------------------------------------
consensus_13949#2      ------------------------------------------------------------
consensus_13949#0      GCCCTGGCTGCTGGCTGTACAGCTGTACTAAAACCATCTGAATTGGCTTCCGTGACTTGT 720
                                                                                   

consensus_13949#1      ------------------------------------------------------------
consensus_13949#2      ------------------------------------------------------------
consensus_13949#0      TTGGAGCTTGCTGATGTGTGTAAAGAGGTTGGTCTTCCTTCAGGTGTGCTAAACATAGTG 780
                                                                                   

consensus_13949#1      ------------------------------------------------------------
consensus_13949#2      ------------------------------------------------------------
consensus_13949#0      ACTGGATTAGGTTCTGAAGCCGGTGCTCCTTTGTCATCACACCCTGGTGTAGACAAGGTT 840
                                                                                   

consensus_13949#1      ------------------------------------------------------------
consensus_13949#2      ------------------------------------------------------------
consensus_13949#0      GCATTTACTGGGAGTTATGAAACTGGTAAAAAGATTATGGCTTCAGCTGCTCCTATGGTT 900
                                                                                   

consensus_13949#1      ------------------------------------------------------------
consensus_13949#2      ------------------------------------------------------------
consensus_13949#0      AAGCCTGTTTCACTGGAACTTGGTGGAAAAAGTCCTATAGTGGTGTTTGATGATGTTGAT 960
                                                                                   

consensus_13949#1      ------------------------------------------------------------
consensus_13949#2      ------------------------------------------------------------
consensus_13949#0      GTTGAAAAAGCTGTTGAGTGGACTCTCTTTGGTTGCTTTTGGACCAATGGCCAGATTTGC 1020
                                                                                   

consensus_13949#1      ------------------------------------------------------AGGATG 6
consensus_13949#2      ------------------------------------------------------------
consensus_13949#0      AGTGCAACATCGCGTCTTATTCTTCATAAAAAAATCGCTAAAGAATTTCAAGAAAGGATG 1080
                                                                                   

consensus_13949#1      GTTGCATGGGCCAAAAATATTAAGGTGTCAGATCCACTTGAAGAGGGTTGCAGGCTTGGG 66
consensus_13949#2      ------------------------------------------------------------
consensus_13949#0      GTTGCATGGGCCAAAAATATTAAGGTGTCAGATCCACTTGAAGAGGGTTGCAGGCTTGGG 1140
                                                                                   

consensus_13949#1      CCCGTTGTTAGTGAAGGACAGTATGAGAAGATTAAGCAATTTGTATCTACCGCCAAAAGC 126
consensus_13949#2      ------------------------------------------------------------
consensus_13949#0      CCCGTTGTTAGTGAAGGACAGTATGAGAAGATTAAGCAATTTGTATCTACCGCCAAAAGC 1200
                                                                                   

consensus_13949#1      CAAGGTGCTACCATTCTGACTGGTGGGGTTAGACCCAAGCATCTGGAGAAAGGTTTCTAT 186
consensus_13949#2      ------------------------------------------------------------
consensus_13949#0      CAAGGTGCTACCATTCTGACTGGTGGGGTTAGACCCAAGCATCTGGAGAAAGGTTTCTAT 1260
                                                                                   

consensus_13949#1      ATTGAACCCACAATCATTACTGATGTCGATACATCAATGCAAATTTGGAGGGAAGAAGTT 246
consensus_13949#2      ------------------------------------------------------------
consensus_13949#0      ATTGAACCCACAATCATTACTGATGTCGATACATCAATGCAAATTTGGAGGGAAGAAGTT 1320
                                                                                   

consensus_13949#1      TTTGGTCCAGTGCTCTGTGTGAAAGAATTTAGCACTGAAGAAGAAGCCATTGAATTGGCC 306
consensus_13949#2      ------------------------------------------------------------
consensus_13949#0      TTTGGTCCAGTGCTCTGTGTGAAAGAATTTAGCACTGAAGAAGAAGCCATTGAATTGGCC 1380
                                                                                   

consensus_13949#1      AACGATACTCATTATGGTCTGGCTGGTGCTGTGCTTTCCGGTGACCGCGAGCGATGCCAG 366
consensus_13949#2      -------------------TGGCTGGTGCTGTGCTTTCCGGTGACCGCGAGCGATGCCAG 41
consensus_13949#0      AACGATACTCATTATGGTCTGGCTGGTGCTGTGCTTTCCGGTGACCGCGAGCGATGCCAG 1440
                                          *****************************************

consensus_13949#1      AGATTAACTGAGGAGATCGATGCCGGAATTATCTGGGCGAACTGCTCGCAACCCTGCTTC 426
consensus_13949#2      ATATTAACTGAGGAGATCGATGCCGGAATTATCTGGGTGAACTGCTCGCAACCCTGCTTT 101
consensus_13949#0      AGATTAACTGAGGAGATCGATGCCGGAATTATCTGGGTGAACTGCTCGCAACCCTGCTTC 1500
                       * *********************************** ********************* 

consensus_13949#1      TGCCAAGCTCCATGGGGCGGGAACAAGCGCAGCGGCTTTGGACGCGAGCTCGGAGAAGGG 486
consensus_13949#2      TGCCAAGCTCCATGGGGCGGGAACAAGCGCAGCGGCTTTGGACGCGAGCTCGGAGAAGGG 161
consensus_13949#0      TGCCAAGCTCCATGGGGCGGGAACAAGCGCAGCGGCTTTGGACGCGAGCTCGGAGAAGGG 1560
                       ************************************************************

consensus_13949#1      GGCATTGACAACTACCTAAGCGTCAAGCAAGTGACGGAGTACGCCTCCGATGAGCCGTGG 546
consensus_13949#2      GGCATTGACAACTACCTAAGCGTCAAGCAAGTGACGGAGTACGCCTCCGATGAGCCGTGG 221
consensus_13949#0      GGCATTGACAACTACCTAAGCGTCAAGCAAGTGACGGAGTACGCCTCCGATGAGCCGTGG 1620
                       ************************************************************

consensus_13949#1      GGATGGTACAAATCCCCTTCCAAGCTGTAATGTAATATGCGCATACGCATGACACGCCCA 606
consensus_13949#2      GGATGGTACAAATCCCCTTCCAAGCTGTAATGTAATATGCGCATACGCATGACACGCCCA 281
consensus_13949#0      GGATGGTACAAATCCCCTTCCAAGCTGTAATGTAATATGCGCATACGCATGACACGCCCA 1680
                       ************************************************************

consensus_13949#1      TCTGTTCTGATCGTTTGGAATAAGAGGCCATAGTATGTCGGGATGGACTTTGTGCATATC 666
consensus_13949#2      TCTGTTCTGATCGTTTGGAATAAGAGGCCATAGTATGACGGGATGGACTTTGTGCATATC 341
consensus_13949#0      TCTGTTCTGATCGTTTGGAATAAGAGGCCATAGTATGACGGGATGGACTTTGTGCATATC 1740
                       ************************************* **********************

consensus_13949#1      GATGTTTGATTTGCCATGTGCTGAGCCTGGAAATAAAAAAGGTTATAGTTGGAGACTTGT 726
consensus_13949#2      GATGTTTGATTTGCCATGTGCTGAGCCTGGAAATAAAAAAGGTTATAGTTGGAGACTTGT 401
consensus_13949#0      GATGTTTGATTTGCCATGTGCTGAGCCTGGAAATAAAAAAGGTTATAGTTGGAGACTAAA 1800
                       *********************************************************   

consensus_13949#1      GAGAGTTGTACGACTTGTACTGATGGTTACGCGACAATTTGTGCATGGATAGTTTGTGTG 786
consensus_13949#2      GAGAGTTGTACGACTTGTACTGATGGTTACGCGACAATTTGTGCAAAAAAAAAAAA---- 457
consensus_13949#0      AAAAAAAAAAA------------------------------------------------- 1811
                        * *     *                                                  

consensus_13949#1      CTTGTACCGGGGTTCTCTCCGTAAACAAAAAAAGG 821
consensus_13949#2      -----------------------------------
consensus_13949#0      -----------------------------------