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Oryza sativa
cluster # 13957 cluster # 13957       Sequences # 14       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_13957#0 length = 1454 sequences # 10  
 consensus_13957#1 length = 1439 sequences # 4  
consensusID : consensus_13957#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 1454
fasta sequence 
                              [TCTCCTCTATAAAACTCACTCACCCCGCCGGCGAGCTCAAGCTCAAGCTCAGCCTCAGCGATCGACAAGTAAGTAGATCCAAATCCATCCATGGAAGCCACCGGCACACGGCTGACGCGCTCCGCCTCCCTCTCCCCACGCCTCCGCCGCTCCCCCACAGCCTTGTGCGTCTCCCCGCGCAGCAT-GCATCATCATCATCAGC-AGCAGCAGCAGAGCCTCCGCCGCGCCACC-TCCGACGCCGACATC-GCCAGATCCGCGCCCGCGACGGCATCATCGCCGCTGCCCCTCCTCCTCCGCGACATCC-TGGA-GGAGGACG-TGGTCGTGGTGGTGGACGGCGCCGGGCGCGGCAAGGGCAACGACGACGACGACAAGACGTCCGGGCGCGGCGGAGGCGGCGGCGGGCACATGGACATGGGGGAGTACTACCGGCGGGTTCTGAGGGTGGAGCCGGAGAACCCGCTGGTGCTGCGCAACTACGGGAGGTACCTGCAGGAGGTGGAGGGCGACCTGGGCGGCGCGGAGGAGTGCTACGCCAGGGCGCTGCTGGCCTCCCCCGACGACGGCGACCTGCT-CAGCCTCTACGGCCAGCTGCTGTGGGAGACGAGTCAGGACAAGGACCGCGCCGCCGCCTACCTGGAGCGCGCCGTCCAGGCCGCGCCCGATGACTGCTACGTGCTTGGATCGTACGCGAGTTTCCTGTGGGACGCGGAAGAGGATGAAGACGACGAAGCAGAGGATGAGATGAAACCGCCGCTGGTGCCGGCGTCCTGCTAACCCAACCCGGCGTTTGCCTTTGCTTGTGTACATATGAGAGCTTGCTTTTGTCAAAGGCAGATCGAGACACGATCCATCCTGGTGTGCCTGCCTGCCTGCCTGCGCTTGTACAAATTAATTACTAGCACATCGATCCTTGCTCCATCAGTTTGCTTCTTCTGTACATACTCCAGTAGCTAGCGCCTTCTTGATGAT-GGATCGTTGGCTACATCCATCGTCAATACACACACTGATGAACACCAGAGATCAATTCAACTGCAGTGCAAGCCAGGGCGCGCGGCGGCGAGCAGATCGAGCAATTTGGAAGATGCAAATCAGGCCGCCGAGCAGAGCAGAGCAGCTCAGTTCAAGTGCGGACGGACGGCTGGATGATTCATCCACACCGTACCACACTTTGCACATGGATAACCAGACTTGTTGCTTCTTTATGTAACACCTCATAATAAATTCACTCTGCTAATTAATTATACTCGAGTCAAATGCTAGCTACTACTACCTCTTTCAAGCTAGTTTCATTTCATCTCCCTCCTCACTGCCAGGATGTATTCCTTCCTAATTGTATTGTATTGTATACTCCTACAATACAACTTTTGTTTTCTATTTCCATGTCCATCCATTAATACATCCATCCGTTGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU166228             [TCTCCTCTATAAAACTCACTCACCCCGCCGGCGAGCTCAAGCTCAAGCTCAGCCTCAGCGATCGACAAGTAAGTAGATCCAAATCCATCCATGGAAGCCACCGGCACACGGCTGACGCGCTCCGCCTCCCTCTCCCCACGCCTCCGCCGCTCCCCCACAGCCTTGTGCGTCTCCCCGCGCA NATGGCATCATCATCATCAGCAAGCAGCAGCAGAGCCTCCGCCGCGCCACCTTCCGACGCCGACATC GCCAGATCCGCGCCCGCGACGGCATCATCGCCGCTGGCCCTTCTTCTTNGCGACATCCTTGGANGAAGGACGTTGGTCGTGGTNGTTGAa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AU183231             [TCTCCTCTATAAAACTCACTCACCCCGCCGGCGAGCTCAAGCTCAAGCTCAGCCTCAGCGATCGACAAGTAAGTAGATCCAAATCCATCCATGGAAGCCACCGGCACACGGNTGACGCGCTCCGCCTCCCTNTCCCCACGCCTCCGCCGCTCCCCCACAGCCTTGTGCGTCTCCCCGCGCAGCAT GCATCATCATCATCAGC AGCAGCAGCAGAGCCTCCGCCGCGCCACC TCCGACGCCGACATCTGCAAGATCCGCGCCCGCNACGGCATCATNGCCGCTGCCCCTCCTCCTCCGNGACATCC TGGA GGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL AK104125             [                                               CTCAGCCTCAGCGATCGACAAGTAAGTAGATCCAAATCCATCCATGGAAGCCACCGGCACACGGCTGACGCGCTCCGCCTCCCTCTCCCCACGCCTCCGCCGCTCCCCCACAGCCTTGTGCGTCTCCCCGCGCAGCAT GCATCATCATCATCAGC AGCAGCAGCAGAGCCTCCGCCGCGCCACC TCCGACGCCGACATC GCCAGATCCGCGCCCGCGACGGCATCATCGCCGCTGCCCCTCCTCCTCCGCGACATCC TGGA GGAGGACG TGGTCGTGGTGGTGGACGGCGCCGGGCGCGGCAAGGGCAACGACGACGACGACAAGACGTCCGGGCGCGGCGGAGGCGGCGGCGGGCACATGGACATGGGGGAGTACTACCGGCGGGTTCTGAGGGTGGAGCCGGAGAACCCGCTGGTGCTGCGCAACTACGGGAGGTACCTGCAGGAGGTGGAGGGCGACCTGGGCGGCGCGGAGGAGTGCTACGCCAGGGCGCTGCTGGCCTCCCCCGACGACGGCGACCTGCT CAGCCTCTACGGCCAGCTGCTGTGGGAGACGAGTCAGGACAAGGACCGCGCCGCCGCCTACCTGGAGCGCGCCGTCCAGGCCGCGCCCGATGACTGCTACGTGCTTGGATCGTACGCGAGTTTCCTGTGGGACGCGGAAGAGGATGAAGACGACGAAGCAGAGGATGAGATGAAACCGCCGCTGGTGCCGGCGTCCTGCTAACCCAACCCGGCGTTTGCCTTTGCTTGTGTACATATGAGAGCTTGCTTTTGTCAAAGGCAGATCGAGACACGATCCATCCTGGTGTGCCTGCCTGCCTGCCTGCGCTTGTACAAATTAATTACTAGCACATCGATCCTTGCTCCATCAGTTTGCTTCTTCTGTACATACTCCAGTAGCTAGCGCCTTCTTGATGAT GGATCGTTGGCTACATCCATCGTCAATACACACACTGATGAACACCAGAGATCAATTCAACTGCAGTGCAAGCCAGGGCGCGCGGCGGCGAGCAGATCGAGCAATTTGGAAGATGCAAATCAGGCCGCCGAGCAGAGCAGAGCAGCTCAGTTCAAGTGCGGACGGACGGCTGGATGATTCATCCACACCGTACCACACTTTGCACATGGATAACCAGACTTGTTGCTTCTTTATGTAACACCTCATAATAAATTCACTCTG                                                                                                                                                                                                                                ]
[+] EMBL AK099195             [                                                    CCTCAGCGATCGACAAGTAAGTAGATCCAAATCCATCCATGGAAGCCACCGGCACACGGCTGACGCGCTCCGCCTCCCTCTCCCCACGCCTCCGCCGCTCCCCCACAGCCTTGTGCGTCTCCCCGCGCAGCAT GCATCATCATCATCAGC AGCAGCAGCAGAGCCTCCGCCGCGCCACC TCCGACGCCGACATC GCCAGATCCGCGCCCGCGACGGCATCATCGCCGCTGCCCCTCCTCCTCCGCGACATCC TGGA GGAGGACG TGGTCGTGGTGGTGGACGGCGCCGGGCGCGGCAAGGGCAACGACGACGACGACAAGACGTCCGGGCGCGGCGGAGGCGGCGGCGGGCACATGGACATGGGGGAGTACTACCGGCGGGTTCTGAGGGTGGAGCCGGAGAACCCGCTGGTGCTGCGCAACTACGGGAGGTACCTGCAGGAGGTGGAGGGCGACCTGGGCGGCGCGGAGGAGTGCTACGCCAGGGCGCTGCTGGCCTCCCCCGACGACGGCGACCTGCT CAGCCTCTACGGCCAGCTGCTGTGGGAGACGAGTCAGGACAAGGACCGCGCCGCCGCCTACCTGGAGCGCGCCGTCCAGGCCGCGCCCGATGACTGCTACGTGCTTGGATCGTACGCGAGTTTCCTGTGGGACGCGGAAGAGGATGAAGACGACGAAGCAGAGGATGAGATGAAACCGCCGCTGGTGCCGGCGTCCTGCTAACCCAACCCGGCGTTTGCCTTTGCTTGTGTACATATGAGAGCTTGCTTTTGTCAAAGGCAGATCGAGACACGATCCATCCTGGTGTGCCTGCCTGCCTGCCTGCGCTTGTACAAATTAATTACTAGCACATCGATCCTTGCTCCATCAGTTTGCTTCTTCTGTACATACTCCAGTAGCTAGCGCCTTCTTGATGAT GGATCGTTGGCTACATCCATCGTCAATACACACACTGATGAACACCAGAGATCAATTCAACTGCAGTGCAAGCCAGGGCGCGCGGCGGCGAGCAGATCGAGCAATTTGGAAGATGCAAATCAGGCCGCCGAGCAGAGCAGAGCAGCTCAGTTCAAGTGCGGACGGACGGCTGGATGATTCATCCACACCGTACCACACTTTGCACATGGATAACCAGACTTGTTGCTTCTTTATGTAACACCTCATAATAAATTCAC                                                                                                                                                                                                                                    ]
[+] EMBL AK061555             [                                                     CTCAGCGATCGACAAGTAAGTAGATCCAAATCCATCCATGGAAGCCACCGGCACACGGCTGACGCGCTCCGCCTCCCTCTCCCCACGCCTCCGCCGCTCCCCCACAGCCTTGTGCGTCTCCCCGCGCAGCAT GCATCATCATCATCAGC AGCAGCAGCAGAGCCTCCGCCGCGCCACC TCCGACGCCGACATC GCCAGATCCGCGCCCGCGACGGCATCATCGCCGCTGCCCCTCCTCCTCCGCGACATCC TGGA GGAGGACG TGGTCGTGGTGGTGGACGGCGCCGGGCGCGGCAAGGGCAACGACGACGACGACAAGACGTCCGGGCGCGGCGGAGGCGGCGGCGGGCACATGGACATGGGGGAGTACTACCGGCGGGTTCTGAGGGTGGAGCCGGAGAACCCGCTGGTGCTGCGCAACTACGGGAGGTACCTGCAGGAGGTGGAGGGCGACCTGGGCGGCGCGGAGGAGTGCTACGCCAGGGCGCTGCTGGCCTCCCCCGACGACGGCGACCTGCT CAGCCTCTACGGCCAGCTGCTGTGGGAGACGAGTCAGGACAAGGACCGCGCCGCCGCCTACCTGGAGCGCGCCGTCCAGGCCGCGCCCGATGACTGCTACGTGCTTGGATCGTACGCGAGTTTCCTGTGGGACGCGGAAGAGGATGAAGACGACGAAGCAGAGGATGAGATGAAACCGCCGCTGGTGCCGGCGTCCTGCTAACCCAACCCGGCGTTTGCCTTTGCTTGTGTACATATGAGAGCTTGCTTTTGTCAAAGGCAGATCGAGACACGATCCATCCTGGTGTGCCTGCCTGCCTGCCTGCGCTTGTACAAATTAATTACTAGCACATCGATCCTTGCTCCATCAGTTTGCTTCTTCTGTACATACTCCAGTAGCTAGCGCCTTCTTGATGAT GGATCGTTGGCTACATCCATCGTCAATACACACACTGATGAACACCAGAGATCAATTCAACTGCAGTGCAAGCCAGGGCGCGCGGCGGCGAGCAGATCGAGCAATTTGGAAGATGCAAATCAGGCCGCCGAGCAGAGCAGAGCAGCTCAGTTCAAGTGCGGACGGACGGCTGGATGATTCATCCACACCGTACCACACTTTGCACATGGATAACCAGACTTGTTGCTTCTTTATGTAACACCTCATAATAAATTCACTCTGCTAATTAATTATACTCGAGTCAAATGCTAGCTACTACTACCTCTTTCAAGCTAGTTTCATTTCATCTCCCTCCTCACTGCCAGGATGTATTCCTTCCTAATTGTATTGTATTGTATACTCCTACAATACAACTTTTGTTTTCTATTTCCATGTCCATCCATTAATACATCCATCCGTTGGGAcatt                                      ]
[+] EMBL AK104496             [                                                     CTCAGCGATCGACAAGTAAGTAGATCCAAATCCATCCATGGAAGCCACCGGCACACGGCTGACGCGCTCCGCCTCCCTCTCCCCACGCCTCCGCCGCTCCCCCACAGCCTTGTGCGTCTCCCCGCGCAGCAT GCATCATCATCATCAGC AGCAGCAGCAGAGCCTCCGCCGCGCCACC TCCGACGCCGACATC GCCAGATCCGCGCCCGCGACGGCATCATCGCCGCTGCCCCTCCTCCTCCGCGACATCC TGGA GGAGGACG TGGTCGTGGTGGTGGACGGCGCCGGGCGCGGCAAGGGCAACGACGACGACGACAAGACGTCCGGGCGCGGCGGAGGCGGCGGCGGGCACATGGACATGGGGGAGTACTACCGGCGGGTTCTGAGGGTGGAGCCGGAGAACCCGCTGGTGCTGCGCAACTACGGGAGGTACCTGCAGGAGGTGGAGGGCGACCTGGGCGGCGCGGAGGAGTGCTACGCCAGGGCGCTGCTGGCCTCCCCCGACGACGGCGACCTGCT CAGCCTCTACGGCCAGCTGCTGTGGGAGACGAGTCAGGACAAGGACCGCGCCGCCGCCTACCTGGAGCGCGCCGTCCAGGCCGCGCCCGATGACTGCTACGTGCTTGGATCGTACGCGAGTTTCCTGTGGGACGCGGAAGAGGATGAAGACGACGAAGCAGAGGATGAGATGAAACCGCCGCTGGTGCCGGCGTCCTGCTAACCCAACCCGGCGTTTGCCTTTGCTTGTGTACATATGAGAGCTTGCTTTTGTCAAAGGCAGATCGAGACACGATCCATCCTGGTGTGCCTGCCTGCCTGCCTGCGCTTGTACAAATTAATTACTAGCACATCGATCCTTGCTCCATCAGTTTGCTTCTTCTGTACATACTCCAGTAGCTAGCGCCTTCTTGATGAT GGATCGTTGGCTACATCCATCGTCAATACACACACTGATGAACACCAGAGATCAATTCAACTGCAGTGCAAGCCAGGGCGCGCGGCGGCGAGCAGATCGAGCAATTTGGAAGATGCAAATCAGGCCGCCGAGCAGAGCAGAGCAGCTCAGTTCAAGTGCGGACGGACGGCTGGATGATTCATCCACACCGTACCACACTTTGCACATGGATAACCAGACTTGTTGCTTCTTTATGTAACACCTCATAATAAATTCACTCTGCTAATTAATTATACTCGAGTCAAATGCTAGCTACTACTACCTCTTTCAAGCTAGTTTCATTTCATCTCCCTCCTCACTGCCAGGATGTATTCCTTCCTAATTGTATTGTATTGTATACTCCTACAATACAACTTTTGTTTTCTATTTCCATGTCCATCCATTAATACATCCAT                                                   ]
[+] EMBL BE040931             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CGCAACTACGGGAGGTACCTGCAGGAGGTGGAGGGCGACCTGGGCGGCGCGGAGGAGTGCTACGCCAGGGCGCTGCTGGCCTCCCCCGACGACGGCGACCTGCTNCAGCCTCTACGGCCAGCTGCTGTGGGAGACGAGTCAGGACAAGGACCGCGCCGCCGCCTACCTGGAGCGCGCCGTCCAGGCCGCGCCCGATGACTGCTACGTGCTTGGATCGTACGCGAGTTTCCTGTGGGACGCGGAAGAGGATGAAGACGACGAAGCAGAGGATGAGATGAAACCGCCGCTGGTGCCGGCGTCCTGCTAACCCAACCCGGCGTTTGCCTTTGCTTGTGTACATATGAGAGCTTGCTTTTGTCAAAGGCAGATCGAGACACGATCCATCCTGGTG        TGCCTGCCTGCGCTTGTACAAATTAATTACTAGCACATCGATCCTTGCTCCATCAGTTTGCTTCTTTTGTACATACTCCAGTAGCTAGCGCCTTCTTGATGATGGGATCG TGGCTACATCCATCGTCNATACACACACT                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CA999288             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GAGAGCTTGCTTTTGTCAAAGGCAGATCGAGACACGATCCATCCTGGTGTGCCTGCCTGCCTGCCTGCGCTTGTACAAATTAATTACTAGCACATCGATCCTTGCTCCATCAGTTTGCTTCTTCTGTACATACTCCAGTAGCTAGCGCCTTCTTGATGAT GGATCGTTGGCTACATCCATCGTCAATACACACACTGATGAACACCAGAGATCAATTCAACTGCAGTGCAAGCCAGGGCGCGCGGCGGCGAGCAGATCGAGCAATTTGGAAGATGCAAATCAGGCCGCCGAGCAGAGCAGAGCAGCTCAGTTCAAGTGCGGACGGACGGCTGGATGATTCATCCACACCGTACCACACTTTGCACATGGATAACCAGACTTGTTGCTTCTTTATGTAACACCTCATAATAAATTCACTCTGCTAATTAATTATACTCGAGTCAAATGCTAGCTACTACTACCTCTTTCAAGCTAGTTTCATTTCATCTC                                                                                                                                                            ]
[+] EMBL AU174452             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ACATCCATCGTCAATACACACACTGATGAACACCAGAGATCAATTCAACTGCAGTGCAAGCCAGGGCGCGCGGCGGCGAGCAGATCGAGCAATTTGGAAGATGCAAATCAGGCCGCCGAGCAGAGCAGAGCAGCTCAGTTCAAGTGCGGACGGACGGCTGGATGATTCATCCACACCGTACCACACTTTGCACATGGATAACCAGACTTGTTGCTTCTTTATGTAACNCCTCATAATAAATTCACTCTGCTAATTAATTATACTCGAGTCAAATGCTAGCTACTACTACCTCTTTCAAGCTAGTTTCATTTCATCTCCCTCCTCACTGCCAGGATGTATTCCTTCCTAATTGTATTGTATTGNATACTCCTACAATACAACTTTTGTTTTCTATTTCCATGTCCATCCATTAATACATCCATCCGTTGGGAAAAAAAAAAAAAAAAAA                         ]
[+] EMBL AU030537             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GCNCATGGATAACCAGACTTGTTGCTTCTTTATGTAACNCCTCATAATAAATTCACTCTGCTAATTAATTATACTCGNGTCAAATGCTAGCTACTACTACCTCTTTCAAGCTNGTTTCATTTCATCTCCCTCCTCACTNCCAGGATGTATTCCTTCCTAATTGTATTGTATTGTATACTCCTACAATACAACTTTTGTTTTCTATTTCCATGTCCATCNNTTTATNCATCNATCNNTTGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_13957#0
TCTCCTCTATAAAACTCACTCACCCCGCCGGCGAGCTCAAGCTCAAGCTCAGCCTCAGCG
ATCGACAAGTAAGTAGATCCAAATCCATCCATGGAAGCCACCGGCACACGGCTGACGCGC
TCCGCCTCCCTCTCCCCACGCCTCCGCCGCTCCCCCACAGCCTTGTGCGTCTCCCCGCGC
AGCATGCATCATCATCATCAGCAGCAGCAGCAGAGCCTCCGCCGCGCCACCTCCGACGCC
GACATCGCCAGATCCGCGCCCGCGACGGCATCATCGCCGCTGCCCCTCCTCCTCCGCGAC
ATCCTGGAGGAGGACGTGGTCGTGGTGGTGGACGGCGCCGGGCGCGGCAAGGGCAACGAC
GACGACGACAAGACGTCCGGGCGCGGCGGAGGCGGCGGCGGGCACATGGACATGGGGGAG
TACTACCGGCGGGTTCTGAGGGTGGAGCCGGAGAACCCGCTGGTGCTGCGCAACTACGGG
AGGTACCTGCAGGAGGTGGAGGGCGACCTGGGCGGCGCGGAGGAGTGCTACGCCAGGGCG
CTGCTGGCCTCCCCCGACGACGGCGACCTGCTCAGCCTCTACGGCCAGCTGCTGTGGGAG
ACGAGTCAGGACAAGGACCGCGCCGCCGCCTACCTGGAGCGCGCCGTCCAGGCCGCGCCC
GATGACTGCTACGTGCTTGGATCGTACGCGAGTTTCCTGTGGGACGCGGAAGAGGATGAA
GACGACGAAGCAGAGGATGAGATGAAACCGCCGCTGGTGCCGGCGTCCTGCTAACCCAAC
CCGGCGTTTGCCTTTGCTTGTGTACATATGAGAGCTTGCTTTTGTCAAAGGCAGATCGAG
ACACGATCCATCCTGGTGTGCCTGCCTGCCTGCCTGCGCTTGTACAAATTAATTACTAGC
ACATCGATCCTTGCTCCATCAGTTTGCTTCTTCTGTACATACTCCAGTAGCTAGCGCCTT
CTTGATGATGGATCGTTGGCTACATCCATCGTCAATACACACACTGATGAACACCAGAGA
TCAATTCAACTGCAGTGCAAGCCAGGGCGCGCGGCGGCGAGCAGATCGAGCAATTTGGAA
GATGCAAATCAGGCCGCCGAGCAGAGCAGAGCAGCTCAGTTCAAGTGCGGACGGACGGCT
GGATGATTCATCCACACCGTACCACACTTTGCACATGGATAACCAGACTTGTTGCTTCTT
TATGTAACACCTCATAATAAATTCACTCTGCTAATTAATTATACTCGAGTCAAATGCTAG
CTACTACTACCTCTTTCAAGCTAGTTTCATTTCATCTCCCTCCTCACTGCCAGGATGTAT
TCCTTCCTAATTGTATTGTATTGTATACTCCTACAATACAACTTTTGTTTTCTATTTCCA
TGTCCATCCATTAATACATCCATCCGTTGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAA

consensusID : consensus_13957#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1439
fasta sequence 
                              [CTCAGCCTCAGCGATCGACAAGTAAGTAGATCCAAATCCATCCATGGAAGCCACCGGCACACGGCTGACGCGCTCCGCCTCCCTCTCCCCACGCCTCCGCCGCTCCCCCACAGCCTTGTGCGTCTCCCCGCGCAGCATGCATCATCATCATCAGCAGCAGCAGCAGAGCCTCCGCCGCGCCACCTCCGACGCCGACATCGCCAGATCCGCGCCCGCGACGGCATCATCGCCGCTGCCCCTCCTCCTCCGCGACATCCTGGAGGAGGACGTGGTCGTGGTGGTGGACGGCGCCGGGCGCGGCAAGGGCAACGACGACGACGACAAGACGTCCGGGCGCGGCGGAGGCGGCGGCGGGCACATGGACATGGGGGAGTACTACCGGCGGGTTCTGAGGGTGGAGCCGGAGAACCCGCTGGTGCTGCGCAACTACGGGAGGTACCTGCAGGAGGTGGAGGGCGACCTGGGCGGCGCGGAGGAGTGCTACGCCAGGGCGCTGCTGGCCTCCCCCGACGACGGCGACCTGCTCAGCCTCTACGGCCAGCTGCTGTGGGAGACGAGTCAGGACAAGGACCGCGCCGCCGCCTACCTGGAGCGCGCCGTCCAGGCCGCGCCCGATGACTGGTACTAATTATTACTACTAAATTTGCTGATTGATTGATTAAAGACAGAGAATCAAACAATTAACGAAACGGTTGGATTTGATGCGTGCGTGCGTGCGTGCAGCTACGTGCTTGGATCGTACGCGAGTTTCCTGTGGGACGCGGAAGAGGATGAAGACGACGAAGCAGAGGATGAGATGAAACCGCCGCTGGTGCCGGCGTCCTGCTAACCCAACCCGGCGTTTGCCTTTGCTTGTGTACATATGAGAGCTTGCTTTTGTCAAAGGCAGATCGAGACACGATCCATCCTGGTGTGCCTGCCTGCCTGCCTGCGCTTGTACAAATTAATTACTAGCACATCGATCCTTGCTCCATCAGTTTGCTTCTTCTGTACATACTCCAGTAGCTAGCGCCTTCTTGATGATGGATCGTTGGCTACATCCATCGTCAATACACACACTGATGAACACCAGAGATCAATTCAACTGCAGTGCAAGCCAGGGCGCGCGGCGGCGAGCAGATCGAGCAATTTGGAAGATGCAAATCAGGCCGCCGAGCAGAGCAGAGCAGCTCAGTTCAAGTGCGGACGGACGGCTGGATGATTCATCCACACCGTACCACACTTTGCACATGGATGACCAGACTTGTTGCTTCTTTATGTAACACCTCATAATAAATTCACTCTGCTAATTAATTATACTCGAGTCAAATGCTAGCTACTACTACCTCTTTCAAGCTAGTTTCATTTCATCTCCCTCCTCACTGCCAGGATGTATTCCTTCCTAATTGTATTGTATTGTATACTTCTACAATACAACTTTTGTTTTCAAAAAAAAAAAA]

[+] EMBL AK060369             [CTCAGCCTCAGCGATCGACAAGTAAGTAGATCCAAATCCATCCATGGAAGCCACCGGCACACGGCTGACGCGCTCCGCCTCCCTCTCCCCACGCCTCCGCCGCTCCCCCACAGCCTTGTGCGTCTCCCCGCGCAGCATGCATCATCATCATCAGCAGCAGCAGCAGAGCCTCCGCCGCGCCACCTCCGACGCCGACATCGCCAGATCCGCGCCCGCGACGGCATCATCGCCGCTGCCCCTCCTCCTCCGCGACATCCTGGAGGAGGACGTGGTCGTGGTGGTGGACGGCGCCGGGCGCGGCAAGGGCAACGACGACGACGACAAGACGTCCGGGCGCGGCGGAGGCGGCGGCGGGCACATGGACATGGGGGAGTACTACCGGCGGGTTCTGAGGGTGGAGCCGGAGAACCCGCTGGTGCTGCGCAACTACGGGAGGTACCTGCAGGAGGTGGAGGGCGACCTGGGCGGCGCGGAGGAGTGCTACGCCAGGGCGCTGCTGGCCTCCCCCGACGACGGCGACCTGCTCAGCCTCTACGGCCAGCTGCTGTGGGAGACGAGTCAGGACAAGGACCGCGCCGCCGCCTACCTGGAGCGCGCCGTCCAGGCCGCGCCCGATGACTGGTACTAATTATTACTACTAAATTTGCTGATTGATTGATTAAAGACAGAGAATCAAACAATTAACGAAACGGTTGGATTTGATGCGTGCGTGCGTGCGTGCAGCTACGTGCTTGGATCGTACGCGAGTTTCCTGTGGGACGCGGAAGAGGATGAAGACGACGAAGCAGAGGATGAGATGAAACCGCCGCTGGTGCCGGCGTCCTGCTAACCCAACCCGGCGTTTGCCTTTGCTTGTGTACATATGAGAGCTTGCTTTTGTCAAAGGCAGATCGAGACACGATCCATCCTGGTGTGCCTGCCTGCCTGCCTGCGCTTGTACAAATTAATTACTAGCACATCGATCCTTGCTCCATCAGTTTGCTTCTTCTGTACATACTCCAGTAGCTAGCGCCTTCTTGATGATGGATCGTTGGCTACATCCATCGTCAATACACACACTGATGAACACCAGAGATCAATTCAACTGCAGTGCAAGCCAGGGCGCGCGGCGGCGAGCAGATCGAGCAATTTGGAAGATGCAAATCAGGCCGCCGAGCAGAGCAGAGCAGCTCAGTTCAAGTGCGGACGGACGGCTGGATGATTCATCCACACCGTACCACACTTTGCACATGGATGACCAGACTTGTTGCTTCTTTATGTAACACCTCATAATAAATTCACTCTG                                                                                                                                                          ]
[-] EMBL CA759005             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   caacgagccAAGGGGATGAAGACGCCGAAGCAGAGGATGAGATGAACCCGCCCCTGGTGCCGGCGTCCTGCTAACCCAACCCGGCGTTTGCCTTTGCTTGTGTACATATGAGAGCTTGCTTTTGTCAAAGGCAGATCGAGACACGATCCATCCTGGTG        TGCCTGCCTGCGCTTGTACAAATTAATTACTAGCACATCGATCCTTGCTCCATCAGTTTGCTTCTTCTGTACATACTACAGTAGCTAGCGCCTTCTTGATGATGGATCGTTGGCTACATCCATCGTCAATACACACACTGATGAACACCAGAGATCAATTCAACTGCAGTGCAAGCCAGGGCGCGCGGCGGCGAGCAGATCGAGCAAATTGGAAGATGCAAATCAGGGCGCCGAGCAGAGCAGAGCAGCTCAGTTCAAGTGCGGACGGACGGCTGGATGATTCATCCACACCGTACCACACTTTGCACATGGATAACCAGACTTGTTGCTTCTTTATGTGACACCTCATAATAAATTCACTCTGCTAATTAATTATACTCGAGTCAAATGCTAGCTACTACTACCTCTTTCAAGCTAGTTTCATTTCATCTCCCTCCTCACTGCCAGGATGTATTCCTTCCTAATTGTATTGTATTGTATACTTCTACAATACAACTTTTGTTTTCAAAAAAAAAAAA]
[+] EMBL OSC28771             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            cAGAGGATGAAGACGACGAAGCAGAGGATGAGATGAAACCGCCGCTGGTGCCGGCGTCCTGCTAACCCAACCCGGCGTTTGCCTTTGCTTGTGTACATATGAGAGCTTGCTTTTGTCAAAGGCAGATCGAGACACGATCCATCCTGGTGTGCCTNCCTGCCTGCCTGCGCTTGTACAAATTAATTACTAGCACATCGATCCTTGCTCCATCAGTTTGCTTCTTCTGTACATACTCCAGTAGCTAGCGCCTTCTTGATGATGGATCGTTGGCTACATCCATCGTCAATACACACACTGATGAACACCAGAGATCAATTCAACTGCAGTGCAAGCCAGGGCGCGCGGCGGCGAGCAGATCGAGC                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CA999059             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GAGAGCTTGCTTTTGTCAAAGGCAGATCGAGACACGATCCATCCTGGTGTGCCTGCCTGCCTGCCTGCGCTTGTACAAATTAATTACTAGCACATCGATCCTTGCTCCATCAGTTTGCTTCTTCTGTACATACTCCAGTAGCTAGCGCCTTCTTGATGATGGATCGTTGGCTACATCCATCGTCAATACACACACTGATGAACACCAGAGATCAATTCAACTGCAGTGCAAGCCAGGGCGCGCGGCGGCGAGCAGAT                                                                                                                                                                                                                                                                                                                              ]




>consensus_13957#1
CTCAGCCTCAGCGATCGACAAGTAAGTAGATCCAAATCCATCCATGGAAGCCACCGGCAC
ACGGCTGACGCGCTCCGCCTCCCTCTCCCCACGCCTCCGCCGCTCCCCCACAGCCTTGTG
CGTCTCCCCGCGCAGCATGCATCATCATCATCAGCAGCAGCAGCAGAGCCTCCGCCGCGC
CACCTCCGACGCCGACATCGCCAGATCCGCGCCCGCGACGGCATCATCGCCGCTGCCCCT
CCTCCTCCGCGACATCCTGGAGGAGGACGTGGTCGTGGTGGTGGACGGCGCCGGGCGCGG
CAAGGGCAACGACGACGACGACAAGACGTCCGGGCGCGGCGGAGGCGGCGGCGGGCACAT
GGACATGGGGGAGTACTACCGGCGGGTTCTGAGGGTGGAGCCGGAGAACCCGCTGGTGCT
GCGCAACTACGGGAGGTACCTGCAGGAGGTGGAGGGCGACCTGGGCGGCGCGGAGGAGTG
CTACGCCAGGGCGCTGCTGGCCTCCCCCGACGACGGCGACCTGCTCAGCCTCTACGGCCA
GCTGCTGTGGGAGACGAGTCAGGACAAGGACCGCGCCGCCGCCTACCTGGAGCGCGCCGT
CCAGGCCGCGCCCGATGACTGGTACTAATTATTACTACTAAATTTGCTGATTGATTGATT
AAAGACAGAGAATCAAACAATTAACGAAACGGTTGGATTTGATGCGTGCGTGCGTGCGTG
CAGCTACGTGCTTGGATCGTACGCGAGTTTCCTGTGGGACGCGGAAGAGGATGAAGACGA
CGAAGCAGAGGATGAGATGAAACCGCCGCTGGTGCCGGCGTCCTGCTAACCCAACCCGGC
GTTTGCCTTTGCTTGTGTACATATGAGAGCTTGCTTTTGTCAAAGGCAGATCGAGACACG
ATCCATCCTGGTGTGCCTGCCTGCCTGCCTGCGCTTGTACAAATTAATTACTAGCACATC
GATCCTTGCTCCATCAGTTTGCTTCTTCTGTACATACTCCAGTAGCTAGCGCCTTCTTGA
TGATGGATCGTTGGCTACATCCATCGTCAATACACACACTGATGAACACCAGAGATCAAT
TCAACTGCAGTGCAAGCCAGGGCGCGCGGCGGCGAGCAGATCGAGCAATTTGGAAGATGC
AAATCAGGCCGCCGAGCAGAGCAGAGCAGCTCAGTTCAAGTGCGGACGGACGGCTGGATG
ATTCATCCACACCGTACCACACTTTGCACATGGATGACCAGACTTGTTGCTTCTTTATGT
AACACCTCATAATAAATTCACTCTGCTAATTAATTATACTCGAGTCAAATGCTAGCTACT
ACTACCTCTTTCAAGCTAGTTTCATTTCATCTCCCTCCTCACTGCCAGGATGTATTCCTT
CCTAATTGTATTGTATTGTATACTTCTACAATACAACTTTTGTTTTCAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13957#0      TCTCCTCTATAAAACTCACTCACCCCGCCGGCGAGCTCAAGCTCAAGCTCAGCCTCAGCG 60
consensus_13957#1      -----------------------------------------------CTCAGCCTCAGCG 13
                                                                      *************

consensus_13957#0      ATCGACAAGTAAGTAGATCCAAATCCATCCATGGAAGCCACCGGCACACGGCTGACGCGC 120
consensus_13957#1      ATCGACAAGTAAGTAGATCCAAATCCATCCATGGAAGCCACCGGCACACGGCTGACGCGC 73
                       ************************************************************

consensus_13957#0      TCCGCCTCCCTCTCCCCACGCCTCCGCCGCTCCCCCACAGCCTTGTGCGTCTCCCCGCGC 180
consensus_13957#1      TCCGCCTCCCTCTCCCCACGCCTCCGCCGCTCCCCCACAGCCTTGTGCGTCTCCCCGCGC 133
                       ************************************************************

consensus_13957#0      AGCATGCATCATCATCATCAGCAGCAGCAGCAGAGCCTCCGCCGCGCCACCTCCGACGCC 240
consensus_13957#1      AGCATGCATCATCATCATCAGCAGCAGCAGCAGAGCCTCCGCCGCGCCACCTCCGACGCC 193
                       ************************************************************

consensus_13957#0      GACATCGCCAGATCCGCGCCCGCGACGGCATCATCGCCGCTGCCCCTCCTCCTCCGCGAC 300
consensus_13957#1      GACATCGCCAGATCCGCGCCCGCGACGGCATCATCGCCGCTGCCCCTCCTCCTCCGCGAC 253
                       ************************************************************

consensus_13957#0      ATCCTGGAGGAGGACGTGGTCGTGGTGGTGGACGGCGCCGGGCGCGGCAAGGGCAACGAC 360
consensus_13957#1      ATCCTGGAGGAGGACGTGGTCGTGGTGGTGGACGGCGCCGGGCGCGGCAAGGGCAACGAC 313
                       ************************************************************

consensus_13957#0      GACGACGACAAGACGTCCGGGCGCGGCGGAGGCGGCGGCGGGCACATGGACATGGGGGAG 420
consensus_13957#1      GACGACGACAAGACGTCCGGGCGCGGCGGAGGCGGCGGCGGGCACATGGACATGGGGGAG 373
                       ************************************************************

consensus_13957#0      TACTACCGGCGGGTTCTGAGGGTGGAGCCGGAGAACCCGCTGGTGCTGCGCAACTACGGG 480
consensus_13957#1      TACTACCGGCGGGTTCTGAGGGTGGAGCCGGAGAACCCGCTGGTGCTGCGCAACTACGGG 433
                       ************************************************************

consensus_13957#0      AGGTACCTGCAGGAGGTGGAGGGCGACCTGGGCGGCGCGGAGGAGTGCTACGCCAGGGCG 540
consensus_13957#1      AGGTACCTGCAGGAGGTGGAGGGCGACCTGGGCGGCGCGGAGGAGTGCTACGCCAGGGCG 493
                       ************************************************************

consensus_13957#0      CTGCTGGCCTCCCCCGACGACGGCGACCTGCTCAGCCTCTACGGCCAGCTGCTGTGGGAG 600
consensus_13957#1      CTGCTGGCCTCCCCCGACGACGGCGACCTGCTCAGCCTCTACGGCCAGCTGCTGTGGGAG 553
                       ************************************************************

consensus_13957#0      ACGAGTCAGGACAAGGACCGCGCCGCCGCCTACCTGGAGCGCGCCGTCCAGGCCGCGCCC 660
consensus_13957#1      ACGAGTCAGGACAAGGACCGCGCCGCCGCCTACCTGGAGCGCGCCGTCCAGGCCGCGCCC 613
                       ************************************************************

consensus_13957#0      GATGACTG---------------------------------------------------- 668
consensus_13957#1      GATGACTGGTACTAATTATTACTACTAAATTTGCTGATTGATTGATTAAAGACAGAGAAT 673
                       ********                                                    

consensus_13957#0      --------------------------------------------------CTACGTGCTT 678
consensus_13957#1      CAAACAATTAACGAAACGGTTGGATTTGATGCGTGCGTGCGTGCGTGCAGCTACGTGCTT 733
                                                                         **********

consensus_13957#0      GGATCGTACGCGAGTTTCCTGTGGGACGCGGAAGAGGATGAAGACGACGAAGCAGAGGAT 738
consensus_13957#1      GGATCGTACGCGAGTTTCCTGTGGGACGCGGAAGAGGATGAAGACGACGAAGCAGAGGAT 793
                       ************************************************************

consensus_13957#0      GAGATGAAACCGCCGCTGGTGCCGGCGTCCTGCTAACCCAACCCGGCGTTTGCCTTTGCT 798
consensus_13957#1      GAGATGAAACCGCCGCTGGTGCCGGCGTCCTGCTAACCCAACCCGGCGTTTGCCTTTGCT 853
                       ************************************************************

consensus_13957#0      TGTGTACATATGAGAGCTTGCTTTTGTCAAAGGCAGATCGAGACACGATCCATCCTGGTG 858
consensus_13957#1      TGTGTACATATGAGAGCTTGCTTTTGTCAAAGGCAGATCGAGACACGATCCATCCTGGTG 913
                       ************************************************************

consensus_13957#0      TGCCTGCCTGCCTGCCTGCGCTTGTACAAATTAATTACTAGCACATCGATCCTTGCTCCA 918
consensus_13957#1      TGCCTGCCTGCCTGCCTGCGCTTGTACAAATTAATTACTAGCACATCGATCCTTGCTCCA 973
                       ************************************************************

consensus_13957#0      TCAGTTTGCTTCTTCTGTACATACTCCAGTAGCTAGCGCCTTCTTGATGATGGATCGTTG 978
consensus_13957#1      TCAGTTTGCTTCTTCTGTACATACTCCAGTAGCTAGCGCCTTCTTGATGATGGATCGTTG 1033
                       ************************************************************

consensus_13957#0      GCTACATCCATCGTCAATACACACACTGATGAACACCAGAGATCAATTCAACTGCAGTGC 1038
consensus_13957#1      GCTACATCCATCGTCAATACACACACTGATGAACACCAGAGATCAATTCAACTGCAGTGC 1093
                       ************************************************************

consensus_13957#0      AAGCCAGGGCGCGCGGCGGCGAGCAGATCGAGCAATTTGGAAGATGCAAATCAGGCCGCC 1098
consensus_13957#1      AAGCCAGGGCGCGCGGCGGCGAGCAGATCGAGCAATTTGGAAGATGCAAATCAGGCCGCC 1153
                       ************************************************************

consensus_13957#0      GAGCAGAGCAGAGCAGCTCAGTTCAAGTGCGGACGGACGGCTGGATGATTCATCCACACC 1158
consensus_13957#1      GAGCAGAGCAGAGCAGCTCAGTTCAAGTGCGGACGGACGGCTGGATGATTCATCCACACC 1213
                       ************************************************************

consensus_13957#0      GTACCACACTTTGCACATGGATAACCAGACTTGTTGCTTCTTTATGTAACACCTCATAAT 1218
consensus_13957#1      GTACCACACTTTGCACATGGATGACCAGACTTGTTGCTTCTTTATGTAACACCTCATAAT 1273
                       ********************** *************************************

consensus_13957#0      AAATTCACTCTGCTAATTAATTATACTCGAGTCAAATGCTAGCTACTACTACCTCTTTCA 1278
consensus_13957#1      AAATTCACTCTGCTAATTAATTATACTCGAGTCAAATGCTAGCTACTACTACCTCTTTCA 1333
                       ************************************************************

consensus_13957#0      AGCTAGTTTCATTTCATCTCCCTCCTCACTGCCAGGATGTATTCCTTCCTAATTGTATTG 1338
consensus_13957#1      AGCTAGTTTCATTTCATCTCCCTCCTCACTGCCAGGATGTATTCCTTCCTAATTGTATTG 1393
                       ************************************************************

consensus_13957#0      TATTGTATACTCCTACAATACAACTTTTGTTTTCTATTTCCATGTCCATCCATTAATACA 1398
consensus_13957#1      TATTGTATACTTCTACAATACAACTTTTGTTTTCAAAAAAAAAAAA-------------- 1439
                       *********** ********************** *     *                  

consensus_13957#0      TCCATCCGTTGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1454
consensus_13957#1      --------------------------------------------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)