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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13971#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 1459 fasta sequence
[TCCAGGAGCAAAATGTACGGAAGCGAGAGCTATTGTTTCTTTCATGGATTACTGCAACACAAATAACAATGTCGATGTTTACAACACTACAGTTACGGTACACAAGTGAGGGAGAAAGAGAGGGGGAGATCCTAAGTGGGAAATGTACAGGATTGAGCTGGTCAGATTTTCTTTTTATCTAATTCGTTTTGCACGAGAGCTTAGCTTAGCCTTGTTCCTTGTAGGGTGTCCAGATCAGCTTGCTAACGTCGACCTCGAGGCCACCCCGGCCGGCGGCCTTGAGGTGGCGGTCGAGAACCTTGGGGTCAGCGCAGATGACGTGCTGACCTTTCCGGTACTGGATCAGGTCCAGACTCTGAAGCGTGCTCAAGATGTCGTCCGCTTTTATTGCCGTCATATCGCTAAGCTCCTTAATGGATATGTTGCTCTTATGTTTCTTTAAAATCTCTAGAAGCACTCTAGTCCAATAACCTCTATAACTGAGCAGACCAAGATCAGAAAGAGGGCGCTCCGGTGTCCCTACTTTACCTTCCTTCTTAGAAAGCTCATAGGAGAAGGCAATCAGGAACTTCCCATATCCTTTTC-TTTGATATGGAGGGAGAGTGAGGATGCAAGCCAAATTGTAAGATTCCTCAGAGTGTTTCTCCTTGGAGAAATACCCCACCATATGACACCCCCGATCATCACATTCACACAGGACGTAGAACAAAAACAAATCAACATCGTAATAAAGTGTCTTGTGATCAAGAAATAGTTTGGCAAGATAACAAAGGTTCTGCCCATAAACTTTGTTCTTC-TTGCCATCAACC-TCAAACATAGA-CAGGGTTCCAC-TTCT-GTATATTTCAT-CACCAGGGGGATGTTTAAGATCACATTTTTTCATGTGCCTCTGAAGCTGTTCCTTGCGCTTCATGAAGTTGAGGCAAAACTCACAGAAGAACAGCTTTGGAGAGTCATTATACTCCGGTGGGAAAGGAGAGAAATACCATGTATCTATCTCATATCTCCCAAGTTCTATCTTCGCTATATTTTTCACCTTTGTGAACTCTTCATGTTCCCGCAAACTAGCAGCATCAAGCTCCTCATGACCTTGCTCCACATGGGTTTCATCAATTTTACGCTTCTGGTGCCGTGTCATCTTCAAGCTTGTTGCCTTATCTTCTACCTTCTCATCAACATCGGTCTCAACAGTCTCAAGATCAAGTTGTTCAAGTTTAACCCACTCATCGAGCCTCCTATT-AACTCGGTGTAGTGGACGTAGTACTCGTAATCGGCGGGGGAGGAGGAGGTGGAGGACTTCCGGCGCTCGATGACCTTGACGGGATGGAGCTTCTGGTCGCGCCACCGGCACATCACGCGCGTGCCCACCTCCAGCGGCAGATGCGACGCCCACGACGCGGACGCGGCGGAGGACCTCAGCCTCCTCTCTACCCCGCCGCCGTTCGAANGNGNNGTTGCACGC]
[+] EMBL CB680837 [TCCAGGAGCAAAATGTACGGAAGCGAGAGCTATTGTTTCTTTCATGGATTACTGCAACACAAATAACAATGTCGATGTTTACAACACTACAGTTACGGTACACAAGTGAGGGAGAAAGAGAGGGGGAGATCCTAAGTGGGAAATGTACAGGATTGAGCTGGTCAGATTTTCTTTTTATCTAATTCGTTTTGCACGAGAGCTTAGCTTAGCCTTGTTCCTTGTAGGGTGTCCAGATCAGCTTGCTAACGTCGACCTCGAGGCCACCCCGGCCGGCGGCCTTGAGGTGGCGGTCGAGAACCTTGGGGTCAGCGCAGATGACGTGCTGACCTTTCCGGTACTGGATCAGGTCCAGACTCTGAAGCGTGCTCAAGATGTCGTCCGCTTTTATTGCCGTCATATCGCTAAGCTCCTTAATGGATATGTTGCTCTTATGTTTCTTTAAAATCTCTAGAAGCACTCTAGTCCAATAACCTCTATAACTGAGCAGACCAAGATCAGAAAGAGGGCGCTCCGGTGTCCCTACTTTACCTTCCTTCTTAGAAAGCTCATAGGAGAAGGCAATCAGGAACTTCCCATATCCTTTTC TTTGATATGGAGGGAGAGTGAGGATGCAAGCCAAATTGTAAGATTCCTCAGAGTGTTTCTCCTTGGAGAAATACCCCACCATATGACACCCCCGATCATCACATTCACACAGGACGTAGAACAAAAACAAATCAACATCGTAATAAAGT ]
[-] EMBL AU090494 [ ttttTAGGGAAGCGAGAGCTATTGTTTCTTTCATGGATTACTGCAACACAAATAACAATGTCGATGTTTACAACACTACAGTTACGGTACACAAGTGAGGGAGAAAGAGAGGGGGAGATCCTAAGTGGGAAATGTACAGGATTGAGCTGGTCAGATTTTCTTTTTATCTAATTCGTTTTGCACGAGAGCTTAGCTTAGCCTTGTTCCTTGTAGGGTGTCCAGATCAGCTTGCTAACGTCGACCTCGAGGCCACCCCGGCCGGCGGCCTTGAGGTGGCGGTCGAGAACCTTGGGGTCAGCGCAGATGACGTGCTGACCTTTCCGGTACTGGATCAGGTCCAGACTCTGAAGCGTGCTCAAGATGTCGTCCGCTTTTATTGCCGTCATATCGCTAAGCTCCTTAATGGATATGTTGCTCTTATGTTTCTTTAAAATCTCTAGAAGCACTCTAGTCCAA ]
[+] EMBL CB653978 [ GCTATTGTTTCTTTCATGGATTACTGCAACACAAATAACAATGTCGATGTTTACAACACTACAGTTACGGTACACAAGTGAGGGAGAAAGAGAGGGGGAGATCCTAAGTGGGAAATGTACAGGATTGAGCTGGTCAGATTTTCTTTTTATCTAATTCGTTTTGCACGAGAGCTTAGCTTAGCCTTGTTCCTTGTAGGGTGTCCAGATCAGCTTGCTAACGTCGACCTCGAGGCCACCCCGGCCGGCGGCCTTGAGGTGGCGGTCGAGAACCTTGGGGTCAGCGCAGATGACGTGCTGACCTTTCCGGTACTGGATCAGGTCCAGACTCTGAAGCGTGCTCAAGATGTCGTCCGCTTTTATTGCCGTCATATCGCTAAGCTCCTTAATGGATATGTTGCTCTTATGTTTCTTTAAAATCTCTAGAAGCACTCTAGTCCAATAACCTCTATAACTGAGCAGACCAAGATCAGAAAGAGGGCGCTCCGGTGTCCCTACTTTACCTTCCTTCTTAGAAAGCTCATAGGAGAAGGCAATCAGGAACTTCCCATATCCTTTTC TTTGATATGGAGGGAGAGTGAGGATGCAAGCCAAATTGTAAGATTCCTCAGAGTGTTTCTCCTTGGAGAAATACCCCACCATATGACACCCCCGATCATCACATTCACACAGGACGTAGAACAAAAACAAATCAACATCGTAATAAAGTGTCTTGTGATCAAGAAATAGTTTGGCAAGATAACAAAGGTTCTGC ]
[+] EMBL CB641572 [ TGTTTCTTTCATGGATTACTGCAACACAAATAACAATGTCGATGTTTACAACACTACAGTTACGGTACACAAGTGAGGGAGAAAGAGAGGGGGAGATCCTAAGTGGGAAATGTACAGGATTGAGCTGGTCAGATTTTCTTTTTATCTAATTCGTTTTGCACGAGAGCTTAGCTTAGCCTTGTTCCTTGTAGGGTGTCCAGATCAGCTTGCTAACGTCGACCTCGAGGCCACCCCGGCCGGCGGCCTTGAGGTGGCGGTCGAGAACCTTGGGGTCAGCGCAGATGACGTGCTGACCTTTCCGGTACTGGATCAGGTCCAGACTCTGAAGCGTGCTCAAGATGTCGTCCGCTTTTATTGCCGTCATATCGCTAAGCTCCTTAATGGATATGTTGCTCTTATGTTTCTTTAAAATCTCTAGAAGCACTCTAGTCCAATAACCTCTATAACTGAGCAGACCAAGATCAGAAAGAGGGCGCTCCGGTGTCCCTACTTTACCTTCCTTCTTAGAAAGCTCATAGGAGAAGGCAATCAGGAACTTCCCATATCCTTTTC TTTGATATGGAGGGAGAGTGAGGATGCAAGCCAAATTGTAAGATTCCTCAGAGTGTTTCTCCTTGGAGAAATACCCCACCATATGACACCCCCGATCATCACATTCACACAGGACGTAGAACAAAAACAAATCAACATCGTAATAAAGTGTCTTGTGATCAAGAAATAGTTTGGCAAGATAACAAAGGTTCTGCCCATAAACTTTGTTCTTC TTGCCATCAACC TCAAACATAGA CAGGGTTCCAC TTCT GTATATTTCAT CACCAG ]
[+] EMBL CB641571 [ GTNCAGATCAGCTTGCTAACGTCGACCTCGAGGCCACCCCGGCCGGCGGCCTTGAGGTGGCGGTCGAGAACCTTGGGGTCAGCGCAGATGACGTGCTGACCTTTCCGGTACTGGATCAGGTCCAGACTCTGAAGCGTGCTCAAGATGTCGTCCGCTTTTATTGCCGTCATATCGCTAAGCTCCTTAATGGATATGTTGCTCTTATGTTTCTTTAAAATCTCTAGAAGCACTCTAGTCCAATAACCTCTATAACTGAGCAGACCAAGATCAGAAAGAGGGCGCTCCGGTGTCCCTACTTTACCTTCCTTCTTAGAAAGCTCATAGGAGAAGGCAATCAGGAACTTCCCATATCCTTTTC TTTGATATGGAGGGAGAGTGAGGATGCAAGCCAAATTGTAAGATTCCTCAGAGTGTTTCTCCTTGGAGAAATACCCCACCATATGACACCCCCGATCATCACATTCACACAGGACGTAGAACAAAAACAAATCAACATCGTAATAAAGTGTCTTGTGATCAAGAAATAGTTTGGCAAGATAACAAAGGTTCTGCCCATAAACTTTGT ]
[+] EMBL CB627676 [ GCCGGCGGCCTTGAGGTGGCGGTCGAGAACCTTGGGGTCAGCGCAGATGACGTGCTGACCTTTCCGGTACTGGATCAGGTCCAGACTCTGAAGCGTGCTCAAGATGTCGTCCGCTTTTATTGCCGTCATATCGCTAAGCTCCTTAATGGATATGTTGCTCTTATGTTTCTTTAAAATCTCTAGAAGCACTCTAGTCCAATAACCTCTATAACTGAGCAGACCAAGATCAGAAAGAGGGCGCTCCGGTGTCCCTACTTTACCTTCCTTCTTAGAAAGCTCATAGGAGAAGGCAATCAGGAACTTCCCATATCCTTTTC TTTGATATGGAGGGAGAGTGAGGATGCAAGCCAAATTGTAAGATTCCTCAGAGTGTTTCTCCTTGGAGAAATACCCCACCATATGACACCCCCGATCATCACATTCACACAGGACGTAGAACAAAAACAAATCAACATCGTAATAAAGTGTCTTGTGATCAAGAAATAGTTTGGCAAGATAACAAAGGTTCTGCCCATAAACTTTGTTCTTC TTGCCATCAACC TCAAACATAGA CAGGGTTCCAC TTCT GTATATTTCAT CACCAGGGGGATGTTTAAGATCACATTTTTTCATGTGCCTCTGAAGCTGTTCCTTGCGCTTCATGAAGTTGAGGCAAAACTCACAGAAGAACAGCTTTGGAGAGTCATTATACTCCGGTGGGAAAGGAGAGAAATACCACGTATCTATCTCATATCTCCCAAGTTCTATCTTCGCTATATTTTTCACCTTTGTGAACTCTTCATGTTCCCGCAAACTAGCAGCATCAAGCTCCTCATGACCTTGCTCCACATGGGTTTCATCAATTTTACGCTTCTGGTG ]
[-] EMBL CB627675 [ tnTAAAATCTCTAGAAGCACTCTAGTCCAATAACCTCTATAACTGAGCAGACCAAGATCAGAAAGAGGGCGCTCCGGTGTCCCTACTTTACCTTCCTTCTTAGAAAGCTCATAGGAGAAGGCAATCAGGAACTTCCCATATCCTTTTC TTTGATATGGAGGGAGAGTGAGGATGCAAGCCAAATTGTAAGATTCCTCAGAGTGTTTCTCCTTGGAGAAATACCCCACCATATGACACCCCCGATCATCACATTCACACAGGACGTAGAACAAAAACAAATCAACATCGTAATAAAGTGTCTTGTGATCAAGAAATAGTTTGGCAAGATAACAAAGGTTCTGCCCATAAACTTTGTTCTTC TTGCCATCAACC TCAAACATAGA CAGGGTTCCAC TTCT GTATATTTCAT CACCAGGGGGATGTTTAAGATCACATTTTTTCATGTGCCTCTGAAGCTGTTCCTTGCGCTTCATGAAGTTGAGGCAAAACTCACAGAAGAACAGCTTTGGAGAGTCATTATACTCCGGTGGGAAAGGAGAGAAATACCACGTATCTATCTCATATCTCCCAAGTTCTATCTTCGCTATATTTTTCACCTTTGTGAACTCTTCATGTTCCCGCAAACTAGCAGCATCAAGCTCCTCATGACCTTGCTCCACATGGGTTTCATCAATTTTACGCTTCTGGTGCCGTGTCATCTTCAAGCTTGTTGCCTTATCTTCTACCTTCTCATCAACATCGGTCTCGACAGT ]
[-] EMBL CB683958 [ CAATCAGGAACTTCCCATAT CTTTTCTTTTGATATGGAGGGAGAGTGAGTATGCAAGCCAAATTGTAAGATTCCTCAGAGTGTTTCTCGTTGGAGAAATACCCCACCATATGACACCCCCGATCATCACATTCACACAGGACGTAGAACAAAAACAAATCAACATCGTAATAAAGTGTCTTGTGATCAAGAAATAGTTTGGCAAGATAACAAAGGTTCTGCCCATAAACTTTGTTCTTC TTGCCATCAACC TCAAACATAGA CAGGGTTCCAC TTCT GTATATTTCAT CACCAGGGGGATGTTTAAGATCACATTTTTTCATGTGCCTCTGAAGCTGTTCCTTGCGCTTCATGAAGTTGAGGCAAAACTCACAGAAGAACAGCTTTGGAGAGTCATTATACTCCGGTGGGAAAGGAGAGAAATACCATGTATCTATCTCATATCTCCCAAGTTCTATCTTCGCTATATTTTTCACCTTTGTGAACTCTTCATGTTCCCGCAAACTAGCAGCATCAAGCTCCTCATGACCTTGCTCCACATGGGTTTCATCAATTTTACGCTTCTGGTGCCGTGTCATCTTCAAGCTTGTTGCCTTATCTTCTACCTTCTCATCAACATCGGTCTCAACAGTCTCAAGATCAAGTTGTTCAAGTTTAACCCACTCATCGAGCCTCCTATTGAACTCGGTGTAGTGGACGTAGTACTCGTAATCGGCGGGGGAGGAGGAGGTGGAGGACTTCCGGCGCTCGATGACCTTGACGGGATGGAGCTTCTGGTCGCGCCACCGGCACATCACGCGCGTGCCCACCTCCAGCGGCAGATGCGACGC ]
[-] EMBL CF306413 [ ACAGGACGTAGAACAAAAACAAATCAACATCGTCATAAAGTGTCTTGTGATCAAGAAATAGTTTGGCAAGATAACAAAGGTTCTGCCCATAAACTTTGTTCTTC TTGCCATCAACC TCAAACATAGA CAGGGTTCCAC TTCT GTATATTTCAT CACCAGGGGGATGTTTAAGATCACATTTTTTCATGTGCCTCTGAAGCTGTTCCTTGCGCTTCATGAAGTTGAGGCAAAACTCACAGAAGAACAGCTTTGGAGAGTCATTATACTCCGGTGGGAAAGGAGAGAAATACCATGTATCTATCTCATATCTCCCAAGTTCTATCTTCGCTATATTTTTCACCTTTGTGAACTCTTCATGTTCCCGCAAACTAGCAGCATCAAGCTCCTCATGACCTTGCTCCACATGGGTTTCATCAATTTTACGCTTCTGGTGCCGTGTCATCTTCAAGCTTGTTGCCTTATCTTCTACCTTCTCATCAACATCGGTCTCAACAGTCTCAAGATCAAGTTGTTCAAGTTTAACCCACTCATCGAGCCTCATATT AACTCGGTGTAGTGGA ]
[+] EMBL AU108105 [ GGTTCTGCCCATAANTTTTGTTCTTCTTTNCCATCACCCTTAAAANATAGACCAGGGTTCNACTTTCTGGTATATTTCATCCACCAGGGGGATGTTTAAGATCACATTTTTTCATGTGCCTCTGAAGCTGTTCCTTGCGCTTCATGAAGTTGAGGCAAAACTCACAGAAGAACAGCTTTGGAGAGTCATTATACTCCGGTGGGAAAGGAGAGAAATACCATGTATCTATCTCATATCTCCCAAGTTCTATCTTCGCTATATTTTTCACCTTTGTGAACTCTTCATGTTCCCGCAAACTAGCAGCATCAAGCTCCTCATGACCTTGCTCCACATGGGTTTCATCAATTTTACGCTTCTGGTGCCGTGTCATCTTCAAGCTTGTTGCCTTATCTTCTACCTTCTCATCAACATCGGTCTCAACAGTCTCAAGATCAAGTTGTTCAAGTTTAACCCACTCATCGAGCCTCCTATTGAACTCGGTGTAGTGGACGTAGTACTCGTAATCGGCGGGGGAGGAGGAGGTGGAGGACTTCCGGCGCTCGATGACCTTGACGGGATGGAGCTTCTGGTCGCGCCACCGGCACATCACGCGCGTGCCCACCTCCAGCGGNAGATGCGACGCCCACGACGCGGACGCGGCGGAGGACCTCAGCCTCCTCTCTACCCCGCCGCCGTTCGAANGNGNNGTTGCACGC]
consensusID : consensus_13971#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 732 fasta sequence
[AACCGCACAACTTCCGATCCAACTCCGACGACGAGATGGGCTCGATGGAGGCGTCCACCGCGCCGGAGAACGGCACCGCCGCCGCCGCGGCGGCCGCGGCCTCGACGGCGTGCAACGGCGCGGGCGGCGGTTCTTTTTATCTAATTCNTTTTGCACGAGAGCTTAACTTAACCTTGTTCCTTGTAGGGTGTCCAGATCAGCTTGCTAACGTCGACCTCGAGGCCACCCCGGCCGGCGGCCTTGAGGTGGCGGTCGAGAACCTTGGGGTCAGCGCAGATGACGTGCTGACCTTTCCGGTACTGGATCAGGTCCAGACTCTGAAGCGTGCTCAAGATGTCGTCCGCTTTTATTGCCGTCATATCGCTAAGCTCCTTAATGGATATGTTGCTCTTATGTTTCTTTAAAATCTCTAGAAGCACTCTAGTCCAATAACCTCTATAACTGAGCAGACCAAGATCAGAAAGAGGGCGCTCCGGTGTCCCTACTTTACCTTCCTTCTTAGAAAGCTCATAGGAGAAGGCAATCAGGAACTTCCCATATCCTTTTCTTTGATATGGAGGGAGAGTGAGGATGCAAGCCAAATTGTAAGATTCCTCAGAGTGTTTCTCCTTGGAGAAATACCCCACCATATGACACCCCCGATCATCACATTCACACAGGACGTAGAACAAAAACAAATCAACATCGTAATAAAGTGTCTTGTGATCAAGAAATAGTTTGGCAAGATAACCA]
[+] EMBL CB653977 [AACCGCACAACTTCCGATCCAACTCCGACGACGAGATGGGCTCGATGGAGGCGTCCACCGCGCCGGAGAACGGCACCGCCGCCGCCGCGGCGGCCGCGGCCTCGACGGCGTGCAACGGCGCGGGCGGCGGTTCTTTTTATCTAATTCNTTTTGCACGAGAGCTTAACTTAACCTTGTTCCTTGTAGGGTGTCCAGATCAGCTTGCTAACGTCGACCTCGAGGCCACCCCGGCCGGCGGCCTTGAGGTGGCGGTCGAGAACCTTGGGGTCAGCGCAGATGACGTGCTGACCTTTCCGGTACTGGATCAGGTCCAGACTCTGAAGCGTGCTCAAGATGTCGTCCGCTTTTATTGCCGTCATATCGCTAAGCTCCTTAATGGATATGTTGCTCTTATGTTTCTTTAAAATCTCTAGAAGCACTCTAGTCCAATAACCTCTATAACTGAGCAGACCAAGATCAGAAAGAGGGCGCTCCGGTGTCCCTACTTTACCTTCCTTCTTAGAAAGCTCATAGGAGAAGGCAATCAGGAACTTCCCATATCCTTTTCTTTGATATGGAGGGAGAGTGAGGATGCAAGCCAAATTGTAAGATTCCTCAGAGTGTTTCTCCTTGGAGAAATACCCCACCATATGACACCCCCGATCATCACATTCACACAGGACGTAGAACAAAAACAAATCAACATCGTAATAAAGTGTCTTGTGATCAAGAAATAGTTTGGCAAGATAACCA]
[-] EMBL AU058160 [ GACCTCGA GCCACCCCG C GC GCCTTGACGT GCNG CGAG ACCTT GGGTCAGCGCAGATGACGTGCTGACCTTTCCGGTACTGGATCAGGTCCAGACTCTGAAGCGTGCTCAAGATGTCGTCCGCTTTTATTGCCGTCATATCGCTAAGCTCCTTAATGGATATGTTGCTCTTATGTTTCTTTAAAATCTCTAGAAGCACTCTAGTCCAATAACCTCTATAACTGAGCAGACCAAGATCAGAAAGAGGGCGCTCCGGTGTCCCTACTTTACCTTCCTTCTTAGAAAGCTCATAGGAGAAGGCAATCAGGAACTTCCCATATCCTTTTCTTTGATATGGAGGGAGAGTGAGGATGCAAGCCAAATTGTAAGATTCCTCAGAGTGTTTCTC ]
consensusID : consensus_13971#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 265 fasta sequence
[ATACGGTACGTAACGGCATGACAGGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGGGAAGCGAAAAAAATTGTTTCTTTCATGGATTACTGCAACACAAATAACAAT-ATCAAAGTTTACAACACTACAGTTACGGTACACAAGTGAGGGAGAAAGAGAGGGGGAGATCCTAAGTGGGAAATGTACAGGATTGAGCTGGTCAGATTTTCTTTTTATCTAATTCGTTTTGCACGAAAGCTTAACTTAACCTTGTTCCTTGTAG]
[-] EMBL CF332116 [ATACGGTACGTAACGGCATGACAGGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGGGAAGCGAAAAAAATTGTTTCTTTCATGGATTACTGCAACACAAATAACAAT ATCAAAGTTTACAACACTACAGTTACGGTACACAAGTGAGGGAGAAAGAGAGGGGGAGATCCTAAGTGGGAAATGTACAGGATTGAGCTGGTCAGATTTTCTTTTTATCTAATTCGTTTT ]
[+] EMBL CF332115 [ TTTTTTTTTTTTTTTTTTTAGGGAAGCGAGAGCTATTGTTTCTTTCATGGATTACTGCAACACAAATAACAATGGTCGATGTTTACAACACTACAGTTACGGTACACAAGTGAGGGAAAAAGAGAGGGGGAGATCCTAAGTGGGAAATGTACAGGATTGAGCTGGTCAAATTTTCTTTTTATCTAATTCGTTTTGCACGAAAGCTTAACTTAACCTTGTTCCTTGTAG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_13971#0 TCCAGGAGCAAAATGTACGGAAGCG-AGAGCTATTGTTTCTTTCATGGATTACTGCAACA 59
consensus_13971#1 --------------------AACCGCACAACTTCCGATCCAACTCCG----ACGACGAGA 36
consensus_13971#2 ------------------------------------------------------------
consensus_13971#0 CAAATAACAATGTCGATGTTTACAACACTACAGTTACGGTACACAAGTGAGGGAGAAAGA 119
consensus_13971#1 TGGGCT-CGATGGAGGCGTCCACCGCGCCGGAGA-ACGGCAC-----CGCCGCCGCCGCG 89
consensus_13971#2 ------------------------------------------------------------
consensus_13971#0 GAGGGGGAGATCCTAAGTGGGAAATGTACAGGATTGAGCTGGTCAGATTTTCTTTTTATC 179
consensus_13971#1 GCGGCCGCGGCCTCGAC-----GGCGTGCAA---CGGCGCGGGCGGCGGTTCTTTTTATC 141
consensus_13971#2 ----------ATACGGT------ACGTAACGGCATGACAGGGGTTTTTTTTTTTTTTTTT 44
** * ** ** ***** *
consensus_13971#0 TAATTCGTTTTGCACGAGAGCTTAGCTTAGCCTTGTTCCTTGTAGGGTGTCCAGATCAGC 239
consensus_13971#1 TAATTCNTTTTGCACGAGAGCTTAACTTAACCTTGTTCCTTGTAGGGTGTCCAGATCAGC 201
consensus_13971#2 TTTTTTTTTTTTTAGGGAAGCGAAA---AAAATTGTTTCTTTCATGGATTACTG--CAAC 99
* ** **** * * *** * * ***** *** * ** * * * ** *
consensus_13971#0 TTGCTAACGTCGACCTCGAGGCCACCCCGGCCGGCGGCCTTGAGGTGGCGGTCGAGAACC 299
consensus_13971#1 TTGCTAACGTCGACCTCGAGGCCACCCCGGCCGGCGGCCTTGAGGTGGCGGTCGAGAACC 261
consensus_13971#2 --ACAAATAACAATATCAAAGTTT---------ACAACACTACAGTTACGGTACACAAGT 148
* ** * * ** * * * * * ** **** * **
consensus_13971#0 TTGGG-GTCAGCGCAGATGACGTGCTGACCTTTCCGGTACTGGATCAGGTCCAGACTCTG 358
consensus_13971#1 TTGGG-GTCAGCGCAGATGACGTGCTGACCTTTCCGGTACTGGATCAGGTCCAGACTCTG 320
consensus_13971#2 GAGGGAGAAAGAGAGGGGGAGATCCTAAGTG----GGAAATGTACAGGATTGAGCTGGTC 204
*** * ** * * ** * ** * ** * ** * * * ** *
consensus_13971#0 AAGCGTGCTCAAGATGTCGTCCGCTTTTATTGCCGTCATATCGCTAAGCTCCTTAATGGA 418
consensus_13971#1 AAGCGTGCTCAAGATGTCGTCCGCTTTTATTGCCGTCATATCGCTAAGCTCCTTAATGGA 380
consensus_13971#2 AGATTTTCTTTTTATCTAATTCGTTTTGCACGAAAGCTTAAC-TTAACCTTGTTCCTTGT 263
* * ** ** * * ** *** * * ** * *** ** ** * *
consensus_13971#0 TATGTTGCTCTTATGTTTCTTTAAAATCTCTAGAAGCACTCTAGTCCAATAACCTCTATA 478
consensus_13971#1 TATGTTGCTCTTATGTTTCTTTAAAATCTCTAGAAGCACTCTAGTCCAATAACCTCTATA 440
consensus_13971#2 AG---------------------------------------------------------- 265
consensus_13971#0 ACTGAGCAGACCAAGATCAGAAAGAGGGCGCTCCGGTGTCCCTACTTTACCTTCCTTCTT 538
consensus_13971#1 ACTGAGCAGACCAAGATCAGAAAGAGGGCGCTCCGGTGTCCCTACTTTACCTTCCTTCTT 500
consensus_13971#2 ------------------------------------------------------------
consensus_13971#0 AGAAAGCTCATAGGAGAAGGCAATCAGGAACTTCCCATATCCTTTTCTTTGATATGGAGG 598
consensus_13971#1 AGAAAGCTCATAGGAGAAGGCAATCAGGAACTTCCCATATCCTTTTCTTTGATATGGAGG 560
consensus_13971#2 ------------------------------------------------------------
consensus_13971#0 GAGAGTGAGGATGCAAGCCAAATTGTAAGATTCCTCAGAGTGTTTCTCCTTGGAGAAATA 658
consensus_13971#1 GAGAGTGAGGATGCAAGCCAAATTGTAAGATTCCTCAGAGTGTTTCTCCTTGGAGAAATA 620
consensus_13971#2 ------------------------------------------------------------
consensus_13971#0 CCCCACCATATGACACCCCCGATCATCACATTCACACAGGACGTAGAACAAAAACAAATC 718
consensus_13971#1 CCCCACCATATGACACCCCCGATCATCACATTCACACAGGACGTAGAACAAAAACAAATC 680
consensus_13971#2 ------------------------------------------------------------
consensus_13971#0 AACATCGTAATAAAGTGTCTTGTGATCAAGAAATAGTTTGGCAAGATAACAAAGGTTCTG 778
consensus_13971#1 AACATCGTAATAAAGTGTCTTGTGATCAAGAAATAGTTTGGCAAGATAACCA-------- 732
consensus_13971#2 ------------------------------------------------------------
consensus_13971#0 CCCATAAACTTTGTTCTTCTTGCCATCAACCTCAAACATAGACAGGGTTCCACTTCTGTA 838
consensus_13971#1 ------------------------------------------------------------
consensus_13971#2 ------------------------------------------------------------
consensus_13971#0 TATTTCATCACCAGGGGGATGTTTAAGATCACATTTTTTCATGTGCCTCTGAAGCTGTTC 898
consensus_13971#1 ------------------------------------------------------------
consensus_13971#2 ------------------------------------------------------------
consensus_13971#0 CTTGCGCTTCATGAAGTTGAGGCAAAACTCACAGAAGAACAGCTTTGGAGAGTCATTATA 958
consensus_13971#1 ------------------------------------------------------------
consensus_13971#2 ------------------------------------------------------------
consensus_13971#0 CTCCGGTGGGAAAGGAGAGAAATACCATGTATCTATCTCATATCTCCCAAGTTCTATCTT 1018
consensus_13971#1 ------------------------------------------------------------
consensus_13971#2 ------------------------------------------------------------
consensus_13971#0 CGCTATATTTTTCACCTTTGTGAACTCTTCATGTTCCCGCAAACTAGCAGCATCAAGCTC 1078
consensus_13971#1 ------------------------------------------------------------
consensus_13971#2 ------------------------------------------------------------
consensus_13971#0 CTCATGACCTTGCTCCACATGGGTTTCATCAATTTTACGCTTCTGGTGCCGTGTCATCTT 1138
consensus_13971#1 ------------------------------------------------------------
consensus_13971#2 ------------------------------------------------------------
consensus_13971#0 CAAGCTTGTTGCCTTATCTTCTACCTTCTCATCAACATCGGTCTCAACAGTCTCAAGATC 1198
consensus_13971#1 ------------------------------------------------------------
consensus_13971#2 ------------------------------------------------------------
consensus_13971#0 AAGTTGTTCAAGTTTAACCCACTCATCGAGCCTCCTATTAACTCGGTGTAGTGGACGTAG 1258
consensus_13971#1 ------------------------------------------------------------
consensus_13971#2 ------------------------------------------------------------
consensus_13971#0 TACTCGTAATCGGCGGGGGAGGAGGAGGTGGAGGACTTCCGGCGCTCGATGACCTTGACG 1318
consensus_13971#1 ------------------------------------------------------------
consensus_13971#2 ------------------------------------------------------------
consensus_13971#0 GGATGGAGCTTCTGGTCGCGCCACCGGCACATCACGCGCGTGCCCACCTCCAGCGGCAGA 1378
consensus_13971#1 ------------------------------------------------------------
consensus_13971#2 ------------------------------------------------------------
consensus_13971#0 TGCGACGCCCACGACGCGGACGCGGCGGAGGACCTCAGCCTCCTCTCTACCCCGCCGCCG 1438
consensus_13971#1 ------------------------------------------------------------
consensus_13971#2 ------------------------------------------------------------
consensus_13971#0 TTCGAANGNGNNGTTGCACGC 1459
consensus_13971#1 ---------------------
consensus_13971#2 ---------------------
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||