cluster # 14008

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Oryza sativa
cluster # 14008 cluster # 14008 Sequences # 14 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_14008#0 length = 1543 sequences # 5
consensus_14008#1 length = 768 sequences # 5

consensus_14008#2 length = 612 sequences # 1
consensus_14008#3 length = 551 sequences # 3

consensusID : consensus_14008#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1543
fasta sequence

                              [CAGCGAGCCGAAGAAGCTTAGCTTTAAGCAGCAGCTAGCAATGGCAGCAGCAAGGGCGTGCTTGGTGGTGGCGCTCCTCCTCCTGGTGGCTCTCTTCTCGCCATCGGAAGCTACTTCGTCTACTTCTTTGCGGCGGCGGCAGGTGCGGAGCCTCCTCAAGCGCCTCAACAAGCCTCCCCTCGCAACCTTTCAGAGCCTAGATGGAGATATCATAGATTGTGTGCACATCTCCAATCAACCTGCATTCGACCATCCTCTTCTCAAGGACCATACAATCCAGATGCGACCTTCTATCCAGCCAAGTGGCCTATATGGAGAAGCAACACGTCCATTCACCCAAACATGGAATCAGAATGGCGAAAAGTGCCCTGACAATACTATACCGATCCGAAGGACCAAGGAGGAGGATGTCATGAGGGCCACCTCTGTTACAACGTTTGGCAAGAAGACG-CACGGCGGGAGCCCTCACCCTCACTCTCACTTGGG--TGGTGTC-ACGGACGG-CCACCACTATGGTGTAGCATATGCG-ACTGGGGATTCCAACTACTACGGAACCAAAGTGACCATCAATGTGTGGCAACCAACGATTGCAACATTCGGTGATTTCAGCTTGTCCCAGCTATGGATCACAGCGGGCTCCTATGAAAACAAGGACCTTAATACCATTGAAGCAGGATGGCAGGTGTACCCAGCTATGTACGGGGATGATAAAACTAGACTCTTCATCTATTGGACTCGTGATGCATATAACACAACGGGATGTTACAATCTAGCGTGCTCAGGGTTCATCCAGACAAACCCGCAGTTCGTCATCGGTGGCAGCTTATCCCCTGTCTCCATCTATGGCAGCACACAATATGAGTATGATTATTTAGTTTGGAAGGACCCAGCGGGGGGCAACTGGTGGTTGCAACTGCAAGGCAATTATGTGGGCTACTGGCCATCATCCATCTTTACCCTCCTGCAGACAGGCGTTGCCGATACTGTGGAATGGGGTGGGGAGGTGTATTCTCCTCAAATTACCGCACCCATGGGCAGTGGACATTTCCCTGAGGAAGGGTTTGGCAAGGCCACCTACAGTAGAGCAATCCAAGTTGTTGATTCCTCCAACCATCTCAAACCACCAAATGGTGTGGGCTTGATAGCCTCGCTGCCCAATTGCTATAATATCATGACTGGTTCCTCCAGTACCACTAGTTGGGGCACTTACATTTACTATGGTGGACCTGGGTGCCCTCAAAACTCCCAAATTGAAGTGATGTAGAGAGAGATCGAGCTCACGATCAAACTACGTACATCACATTAATAATTTACATGTAGTACTACACGATCAACATCGCTCGCTCGCCCAATAATATAGTATTGTTGGATAGGGTCTATACTAGCTAATATTACATGCCGCATGTCAAGCTCTGATTGCTAGTACGTATGTATATGTATACATTTGCATGTATTGGTAAGAGGTTTGAACCAAGCTAGCATTACAAGCTGGCAATAAATGTATTGTCACAGTTTACTGGAAGTTATGTTATGGAATAAAAAAAAA]

[+] EMBL CF276615             [CAGCGAGCCGAAGAAGCTTAGCTTTAAGCAGCAGCTAGCAATGGCAGCAGCAAGGGCGTGCTTGGTGGTGGCGCTCCTCCTCCTGGTGGCTCTCTTCTCGCCATCGGAAGCTACTTCGTCTACTTCTTTGCGGCGGCGGCAGGTGCGGAGCCTCCTCAAGCGCCTCAACAAGCCTCCCCTCGCAACCTTTCAGAGCCTAGATGGAGATATCATAGATTGTGTGCACATCTCCAATCAACCTGCATTCGACCATCCTCTTCTCAAGGACCATACAATCCAGATGCGACCTTCTATCCAGCCAAGTGGCCTATATGGAGAAGCAACACGTCCATTCACCCAAACATGGAATCAGAATGGCGAAAAGTGCCCTGACAATACTATACCGATCCGAAGGACCAAGGAGGAGGATGTCATGAGGGCCACCTCTGTTACAACGTTTGGCAAGAAGACGCCACGGCGGGAGCCCTCACCCTCACTCT ACTTGGGGTTGGTGTCAACGGACGGCCCACCACTATGGTGTAGCATATGCGAACTGGGGATTCCAACTACTACGGAACCAAAGTGACCATCAATGTGTGGCAACCAACGATTGCAACATTCGGTGATTTCAGCTTGTCCCAGCTATGGATCACAGCGGGCTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AK064194             [ AGCGAGCCGAAGAAGCTTAGCTTTAAGCAGCAGCTAGCAATGGCAGCAGCAAGGGCGTGCTTGGTGGTGGCGCTCCTCCTCCTGGTGGCTCTCTTCTCGCCATCGGAAGCTACTTCGTCTACTTCTTTGCGGCGGCGGCAGGTGCGGAGCCTCCTCAAGCGCCTCAACAAGCCTCCCCTCGCAACCTTTCAGAGCCTAGATGGAGATATCATAGATTGTGTGCACATCTCCAATCAACCTGCATTCGACCATCCTCTTCTCAAGGACCATACAATCCAGATGCGACCTTCTATCCAGCCAAGTGGCCTATATGGAGAAGCAACACGTCCATTCACCCAAACATGGAATCAGAATGGCGAAAAGTGCCCTGACAATACTATACCGATCCGAAGGACCAAGGAGGAGGATGTCATGAGGGCCACCTCTGTTACAACGTTTGGCAAGAAGACG CACGGCGGGAGCCCTCACCCTCACTCTCACTTGGG  TGGTGTC ACGGACGG CCACCACTATGGTGTAGCATATGCG ACTGGGGATTCCAACTACTACGGAACCAAAGTGACCATCAATGTGTGGCAACCAACGATTGCAACATTCGGTGATTTCAGCTTGTCCCAGCTATGGATCACAGCGGGCTCCTATGAAAACAAGGACCTTAATACCATTGAAGCAGGATGGCAGGTGTACCCAGCTATGTACGGGGATGATAAAACTAGACTCTTCATCTATTGGACTCGTGATGCATATAACACAACGGGATGTTACAATCTAGCGTGCTCAGGGTTCATCCAGACAAACCCGCAGTTCGTCATCGGTGGCAGCTTATCCCCTGTCTCCATCTATGGCAGCACACAATATGAGTATGATTATTTAGTTTGGAAGGACCCAGCGGGGGGCAACTGGTGGTTGCAACTGCAAGGCAATTATGTGGGCTACTGGCCATCATCCATCTTTACCCTCCTGCAGACAGGCGTTGCCGATACTGTGGAATGGGGTGGGGAGGTGTATTCTCCTCAAATTACCGCACCCATGGGCAGTGGACATTTCCCTGAGGAAGGGTTTGGCAAGGCCACCTACAGTAGAGCAATCCAAGTTGTTGATTCCTCCAACCATCTCAAACCACCAAATGGTGTGGGCTTGATAGCCTCGCTGCCCAATTGCTATAATATCATGACTGGTTCCTCCAGTACCACTAGTTGGGGCACTTACATTTACTATGGTGGACCTGGGTGCCCTCAAAACTCCCAAATTGAAGTGATGTAGAGAGAGATCGAGCTCACGATCAAACTACGTACATCACATTAATAATTTACATGTAGTACTACACGATCAACATCGCTCGCTCGCCCAATAATATAGTATTGTTGGATAGGGTCTATACTAGCTAATATTACATGCCGCATGTCAAGCTCTGATTGCTAGTACGTATGTATATGTATACATTTGCATGTATTGGTAAGAGGTTTGAACCAAGCTAGCATTACAAGCTGGCAATAAATGTATTGTCACAGTTTACTGGAAGTTATGTTATGGAAT         ]
[+] EMBL CA754638             [      GCCGAAGAAGCTTAGCTTTAAGCAGCAGCTAGCAATGGCAGCAGCAAGGGCGTGCTTGGTGGTGGCGCTCCTCCTCCTGGTGGCTCTCTTCTCGCCATCGGAAGCTACTTCGTCTACTTCTTTGCGGCGGCGGCAGGTGCGGAGCCTCCTCAAGCGCCTCAACAAGCCTCCCCTCGCAACCTTTCAGAGCCTAGATGGAGATATCATAGATTGTGTGCACATCTCCNATCAACCTGCATTCGACCATCCTCTTCTCAAGGACCATACAATCCAGATGCGACCTTCTATCCNGCCNAGTGGCCTATATGGAGAAGCAACACGTCCATTCACCCAAACATGGAATCAGAATGGCGAANAGTGCCCTGACNATACTATACCGATCCGAAGGACCAAGGAGGAGGATGTCATGAGGGCCACCTCTGTTACNACGTTTGGGCAGAAGACG CACGGCGGGAGCCCTCACCCTCACTCTCACTTGGG  TGGTGTC ACGGACGG CCACCACTATGGTGTAGCATATGCG ACTGGGGATTCCAACTACTACGGAACCNAAGTGACCATCANTGTGTGGC ACCAACGATTGCAACATTCGGTGA TTCAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CF276616             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TGATTCCTCCAACCATCTCAAACCACCAAATGGTGTGGGCTTGATAGCCTCGCTGCCCAATTGCTATAATATCATGACTGGTTCCTCCAGTACCACTAGTTGGGGCACTTACATTTACTATGGTGGACCTGGGTGCCCTCAAAACTCCCAAATTGAAGTGATGTAGAGAGAGATCGAGCTCACGATCAAACTACGTACATCACATTAATAATTTACATGTAGTACTACACGATCAACATCGCTCGCTCGCCCAATAATATAGTATTGTTGGATAGGGTCTATACTAGCTAATATTACATGCCGCATGTCAAGCTTTGATTGCTAGTACGTATGTATATGTATACATTTGCATGTATTGGTAAGAGGTTTGAACCAAGCTAGCATTACAAGCTGGCAATAAATGTATTGTCACAGTTTACTGGAAGTTATGTTA GGAAAAAAAAAAAA]
[+] EMBL AU089663             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    tGCCCAATAATATAGTATTGTTGGATAGGGTCTATACTAGCTAATATTACATGCCGCATGTCAAGCTCTGATTGCTAGTACGTATGTATATGTATACATTTGCATGTATTGGTAAGAGGTTTGAACCAAGCTAGCATTACAAGCTGGCAATAAATGTATTGTCACAGTTTACTGGAAaa                      ]




>consensus_14008#0
CAGCGAGCCGAAGAAGCTTAGCTTTAAGCAGCAGCTAGCAATGGCAGCAGCAAGGGCGTG
CTTGGTGGTGGCGCTCCTCCTCCTGGTGGCTCTCTTCTCGCCATCGGAAGCTACTTCGTC
TACTTCTTTGCGGCGGCGGCAGGTGCGGAGCCTCCTCAAGCGCCTCAACAAGCCTCCCCT
CGCAACCTTTCAGAGCCTAGATGGAGATATCATAGATTGTGTGCACATCTCCAATCAACC
TGCATTCGACCATCCTCTTCTCAAGGACCATACAATCCAGATGCGACCTTCTATCCAGCC
AAGTGGCCTATATGGAGAAGCAACACGTCCATTCACCCAAACATGGAATCAGAATGGCGA
AAAGTGCCCTGACAATACTATACCGATCCGAAGGACCAAGGAGGAGGATGTCATGAGGGC
CACCTCTGTTACAACGTTTGGCAAGAAGACGCACGGCGGGAGCCCTCACCCTCACTCTCA
CTTGGGTGGTGTCACGGACGGCCACCACTATGGTGTAGCATATGCGACTGGGGATTCCAA
CTACTACGGAACCAAAGTGACCATCAATGTGTGGCAACCAACGATTGCAACATTCGGTGA
TTTCAGCTTGTCCCAGCTATGGATCACAGCGGGCTCCTATGAAAACAAGGACCTTAATAC
CATTGAAGCAGGATGGCAGGTGTACCCAGCTATGTACGGGGATGATAAAACTAGACTCTT
CATCTATTGGACTCGTGATGCATATAACACAACGGGATGTTACAATCTAGCGTGCTCAGG
GTTCATCCAGACAAACCCGCAGTTCGTCATCGGTGGCAGCTTATCCCCTGTCTCCATCTA
TGGCAGCACACAATATGAGTATGATTATTTAGTTTGGAAGGACCCAGCGGGGGGCAACTG
GTGGTTGCAACTGCAAGGCAATTATGTGGGCTACTGGCCATCATCCATCTTTACCCTCCT
GCAGACAGGCGTTGCCGATACTGTGGAATGGGGTGGGGAGGTGTATTCTCCTCAAATTAC
CGCACCCATGGGCAGTGGACATTTCCCTGAGGAAGGGTTTGGCAAGGCCACCTACAGTAG
AGCAATCCAAGTTGTTGATTCCTCCAACCATCTCAAACCACCAAATGGTGTGGGCTTGAT
AGCCTCGCTGCCCAATTGCTATAATATCATGACTGGTTCCTCCAGTACCACTAGTTGGGG
CACTTACATTTACTATGGTGGACCTGGGTGCCCTCAAAACTCCCAAATTGAAGTGATGTA
GAGAGAGATCGAGCTCACGATCAAACTACGTACATCACATTAATAATTTACATGTAGTAC
TACACGATCAACATCGCTCGCTCGCCCAATAATATAGTATTGTTGGATAGGGTCTATACT
AGCTAATATTACATGCCGCATGTCAAGCTCTGATTGCTAGTACGTATGTATATGTATACA
TTTGCATGTATTGGTAAGAGGTTTGAACCAAGCTAGCATTACAAGCTGGCAATAAATGTA
TTGTCACAGTTTACTGGAAGTTATGTTATGGAATAAAAAAAAA

consensusID : consensus_14008#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 768
fasta sequence

                              [TGATGCATATAACGAAACGGGATGTTACAACCTAGCATGCTCAGGATTCATCCAGACAAACCCGCAGTTCGTCATCGGTGGCAGCATATCCCCTGTCTCCACCTATGGTGACACACAATATGAGTACGATTATTTAGTTTGGAAGGACCCAGCGGGGGGCAATTGGTGGTTGCAAGTGCAAGGCAATAATGTGGGCTACTGGCCATCATCCATCTTCACCCTCCTGCAGACAGGCGTTGCCGACAGTGTGGAATGGGGTGGGGAGGTGAATTCGCCTCAAATTACCACACCCATGGGTAGTGGACATTTTCCTGAGGAAGGGTTCGGCAAGGCCACCTACAGCAGAGCAATCCAAGTTGTTGATTCCTCCAACAATCTCAAACCACCAAATGGTGTGGGCTTGATAGCTCCGTTGCCCAGTTGCTATAACGTCATGACTGGTTCCTCCAGTACCACCAGTTGGGGCACTTACATCTACTATGGCGGGCCTGGGTGCCCTCAAAACTCTCAAATTGAAGTGATGTAGAG--AGATCGATCGTGCTCGCCATCAAACTACCTACATCTCCTTAATAATTTACATCTAGTACTACATGCGCCCAATAATAAAGTATTATTAGCTAGGGTCTATACTAGCTAATAGTACATGTCTCATTTCATGCTCTGGTTGCTAGTACGTACGTGTATGTATACATTTGCATGTATATGTAAGAGGTTTGAACCAAGCTAGCAAATAAATGTATTGTTACAGTTTACTAAAAATTAAAAAGA]

[-] EMBL CB657000             [TGATGCATATAACGAAACGGGATGTTACAACCTAGCATGCTCAGGATTCATCCAGACAAACCCGCAGTTTGTCATCGGTGGCAGCATATCCCCTGTCTCCACCTATGGTGACACACAATATGAGTACGATTATTTAGTTTGGAAGGACCCAGCGGGGGGCAATTGGTGGTTGCAAGTGCAAGGCAATAATGTGGGCTACTGGCCATCATCCATTTTCACCCTCCTGCAGACAGGCGTTGCCGACAGTGTGGAATGGGGTGGGGAGGTGAATTCGCCTCAAATTACCACACCCATGGGTAGTGGACATTTTCCTGAGGAAGGGTTCGGCAAGGCCCCCTACAGCAGAGCAATCCAAGTTGTTGATTCCTCCAACAATCTCAAACCACCAAATGGTGTGGGCTTGATAGCTCCGTTGCCCAGTTGCTATAACGTCATGACTGGTTCCTCCAGTACCACCAGTTGGGGCACTTACATTTACTATGGCGGGCCTGGGTGCCCTCAAAACTCTCAAATTGAAGTGATGTAGAG  AGATCGATCGTGCTCGCCATCAAACTACCTACATCTCCTTAATAATTTACATTTAGTACTACATGCGCCCAATAATAAAGTATTATTAGCTAGGGTCTATACTAGCTAATAGTACATGTCTCATTTCATGCTCTGGTTGCTAGTACGTACGTGTATGTATACATTTGCATGTATATGTAAGAGGTTTGAACCAAGCTAGCAAATAAATGTATTGTTA                       ]
[-] EMBL CB655696             [                             ACCTAGCATGCTCAGGATTCATCCAGACAAACCCGCAGTTCGTCATCGGTGGCAGCATATCCCCTGTCTCCACCTATGGTGACACACAATATGAGTACGATTATTTAGTTTGGAAGGACCCAGCGGGGGGCAATTGGTGGTTGCAAGTGCAAGGCAATAATGTGGGCTACTGGCCATCATCCATCTTCACCCTCCTGCAGACAGGCGTTGCCGACAGTGTGGAATGGGGTGGGGAGGTGAATTCGCCTCAAATTACCACACCCATGGGTAGTGGACATTTTCCTGAGGAAGGGTTCGGCAAGGCCACCTACAGCAGAGCAATCCAAGTTGTTGATTCCTCCAACAATCTCAAACCACCAAATGGTGTGGGCTTGATAGCTCCGTTGCCCAGTTGCTATAACGTCATGACTGGTTCCTCCAGTACCACCAGTTGGGGCACTTACATCTACTATGGCGGGCCTGGGTGCCCTCAAAACTCTCAAATTGAAGTGATGTAGAG  AGATCGATCGTGCTCGCCATCAAACTACCTACATCTCCTTAATAATTTACATCTAGTACTACATGCGCCC   AATAAAGTATTATTAGCTAGGGTCTATACTAGCTAATAGTACATGTCTCATTTCATGCTCTGGTTGCTAGTACGTACGTGTATGTATACATTTGCATGTATATGTAAGAGGTTTGAACCAAGCTAGCAAATAAATGTATTGTTACAGTTTCCTAAAAATTAAAAAGA]
[-] EMBL CB659591             [                                           GGATTCATCCAGACAAACCCGCAGTTCGTCATCGGTGGCAGCATATCCCCTGTCTCCACCTATGGTGACACACAATATGAGTACGATTATTTAGTTTGGAAGGACCCAGCGGGGGGCAATTGGTGGTTGCAAGTGCAAGGCAATAATGTGGGCTACTGGCCATCATCCATCTTCACCCTCCTGCAGACAGGCGTTGCCGACAGTGTGGAATGGGGTGGGGAGGTGAATTCGCCTCAAATTACCACACCCATGGGTAGTGGACATTTTCCTGAGGAAGGGTTCGGCAAGGCCACCTACAGCAGAGCAATCCAAGTTGTTGATTCCTCCAACAATCTCAAACCACCAAATGGTGTGGGCTTGATAGCTCCGTTGCCCAGTTGCTATAACGTCATGACTGGTTCCTCCAGTACCACCAGTTGGGGCACTTACATCTACTATGGCGGGCCTGGGTGCCCTCAAAACTCTCAAATTGAAGTGATGTAGAG  AGATCGATCGTGCTCGCCATCAAACTACCTACATCTCCTTAATAATTTACATCTAGTACTACATGCGCCCAATAATAAAGTATTATTAGCTAGGGTCTATACTAGCTAATAGTACATGTCTCATTTCATGCTCTGGTTGCTAGTACGTACGTGTATGTATACATTTGCATGTATATGTAAGAGGTTTGAACCAAGCTAGCAAATAAATGTATTG                          ]
[+] EMBL BI812338             [                                                                                                                                                                                                                                                                                                                                            CCACCTACAGCAGAGCAATCCAAGTTGTTGATTCCTCCAACAATCTCAAACCACCAAATGGTGTGGGCTTGATAGCTCCGTTGCCCAGTTGCTATAACGTCATGACTGGTTCCTCCAGTACCACCAGTTGGGGCACTTACATCTACTATGGCGGGCCTGGGTGCCCTCAAAACTCTCAAATTGAAGTGATGTAGAG  AGATCGATCGTGCTCGCCATCAAACTACCTACATCTCCTTAATAATTTACATCTAGTACTACATGCGCCCAATAATAAAGTATTATTAGCTAGGGTCTATACTAGCTAATAGTACATGTCTCATTTCATGCTCTGGTTGCTAGTACGTACGTGTATGTATACATTTGCATGTATATGTAAGAGGTTTGAACCAAGCTAGCAAATAAATGTATTGTTACAGTTTACTAAAAA         ]
[+] EMBL BI807363             [                                                                                                                                                                                                                                                                                                                                                    AGCAGAGCAATCCAAGTTGTTGATTCCTCCAACAATCTCAAACCACCAAATGGTGTGGGCTTGATAGCTCCGTTGCCCAGTTGCTATAACGTCATGACTGGTTCCTCCAGTACCACCAGTTGGGGCACTTACATCTACTATGGTGGGCCTGGGTGCCCTC AAACTCTCAAATTGAAGTGATGTAGAGACAGATCGATCGAGCTCGCCATCAAACTACCTACATCTCCTTAATAATTTGCATCTAGTACTACATGCGCCCAATAATAAAGTATTATTAGCTGGGGTCTATACTAGCTAATAGTACATGTCTCATTTCATGCTCTGGTTGCTAGTACTTATGTATATGTATACATTTGCATGTATTTGTAAGAGGTTTGAACC AGCTAGCAAATAAATGTATTGTTACAGTTTAAAAAAA          ]




>consensus_14008#1
TGATGCATATAACGAAACGGGATGTTACAACCTAGCATGCTCAGGATTCATCCAGACAAA
CCCGCAGTTCGTCATCGGTGGCAGCATATCCCCTGTCTCCACCTATGGTGACACACAATA
TGAGTACGATTATTTAGTTTGGAAGGACCCAGCGGGGGGCAATTGGTGGTTGCAAGTGCA
AGGCAATAATGTGGGCTACTGGCCATCATCCATCTTCACCCTCCTGCAGACAGGCGTTGC
CGACAGTGTGGAATGGGGTGGGGAGGTGAATTCGCCTCAAATTACCACACCCATGGGTAG
TGGACATTTTCCTGAGGAAGGGTTCGGCAAGGCCACCTACAGCAGAGCAATCCAAGTTGT
TGATTCCTCCAACAATCTCAAACCACCAAATGGTGTGGGCTTGATAGCTCCGTTGCCCAG
TTGCTATAACGTCATGACTGGTTCCTCCAGTACCACCAGTTGGGGCACTTACATCTACTA
TGGCGGGCCTGGGTGCCCTCAAAACTCTCAAATTGAAGTGATGTAGAGAGATCGATCGTG
CTCGCCATCAAACTACCTACATCTCCTTAATAATTTACATCTAGTACTACATGCGCCCAA
TAATAAAGTATTATTAGCTAGGGTCTATACTAGCTAATAGTACATGTCTCATTTCATGCT
CTGGTTGCTAGTACGTACGTGTATGTATACATTTGCATGTATATGTAAGAGGTTTGAACC
AAGCTAGCAAATAAATGTATTGTTACAGTTTACTAAAAATTAAAAAGA

consensusID : consensus_14008#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 612
fasta sequence

                              [TTTGAGACCACGGGGCATTGTGTTCAGTCCAAGCCAATAATGTGGCTACTGCCATCATCCATCTTCACCCTCCTCAGACAGCGTTCCGACAGTGTGGAATGGGGGTGGGGAGGTGGATTCGCCTCAAATTACCACACCCATGGGTAGTGGACATTTTCCTGAGGAAGGGTTCGGCAAGGCCACCTATAGCAGAGCAATCCAAGTTGTTGATTCCTCCAACAATCTCAAACCACCAAATGGTGTGGGCTTGATAGCTCCGTTGCCCAGTTGCTATAACGTCATGACTGGTTCCTCCAGTACCACCAGTTGGGGCACTTACATCTACTATGGTGGGCCTGGGTGCCCTCAAACTCTCAAATTTGAAGTGATGTAGAGACAGATCGATCGAGCTCGCCATCAAACTACCTACATCCCCTTAATAATTTGCATCTAGTACTACATGCGCCCAATAATAAAGTATTTATTAGCTGGGGTCTTATTACTAGCTAATAGTACAATTTCTCCTTTCATGGCTCTGGTTGCTAGTACTTATGTATATGTAAACTTTGCCATGTATTTGTAAGAGTTTTGAACCAGCTACCAATAAATGTATTGTTACGTTTACGGGAAAAA]

[+] EMBL BI806028             [TTTGAGACCACGGGGCATTGTGTTCAGTCCAAGCCAATAATGTGGCTACTGCCATCATCCATCTTCACCCTCCTCAGACAGCGTTCCGACAGTGTGGAATGGGGGTGGGGAGGTGGATTCGCCTCAAATTACCACACCCATGGGTAGTGGACATTTTCCTGAGGAAGGGTTCGGCAAGGCCACCTATAGCAGAGCAATCCAAGTTGTTGATTCCTCCAACAATCTCAAACCACCAAATGGTGTGGGCTTGATAGCTCCGTTGCCCAGTTGCTATAACGTCATGACTGGTTCCTCCAGTACCACCAGTTGGGGCACTTACATCTACTATGGTGGGCCTGGGTGCCCTCAAACTCTCAAATTTGAAGTGATGTAGAGACAGATCGATCGAGCTCGCCATCAAACTACCTACATCCCCTTAATAATTTGCATCTAGTACTACATGCGCCCAATAATAAAGTATTTATTAGCTGGGGTCTTATTACTAGCTAATAGTACAATTTCTCCTTTCATGGCTCTGGTTGCTAGTACTTATGTATATGTAAACTTTGCCATGTATTTGTAAGAGTTTTGAACCAGCTACCAATAAATGTATTGTTACGTTTACGGGAAAAA]




>consensus_14008#2
TTTGAGACCACGGGGCATTGTGTTCAGTCCAAGCCAATAATGTGGCTACTGCCATCATCC
ATCTTCACCCTCCTCAGACAGCGTTCCGACAGTGTGGAATGGGGGTGGGGAGGTGGATTC
GCCTCAAATTACCACACCCATGGGTAGTGGACATTTTCCTGAGGAAGGGTTCGGCAAGGC
CACCTATAGCAGAGCAATCCAAGTTGTTGATTCCTCCAACAATCTCAAACCACCAAATGG
TGTGGGCTTGATAGCTCCGTTGCCCAGTTGCTATAACGTCATGACTGGTTCCTCCAGTAC
CACCAGTTGGGGCACTTACATCTACTATGGTGGGCCTGGGTGCCCTCAAACTCTCAAATT
TGAAGTGATGTAGAGACAGATCGATCGAGCTCGCCATCAAACTACCTACATCCCCTTAAT
AATTTGCATCTAGTACTACATGCGCCCAATAATAAAGTATTTATTAGCTGGGGTCTTATT
ACTAGCTAATAGTACAATTTCTCCTTTCATGGCTCTGGTTGCTAGTACTTATGTATATGT
AAACTTTGCCATGTATTTGTAAGAGTTTTGAACCAGCTACCAATAAATGTATTGTTACGT
TTACGGGAAAAA

consensusID : consensus_14008#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 551
fasta sequence

                              [GGCAGCAGCGAGGACGTGGAGTAGGCGAGGCTTGGTGGCGCTCCTCCTGCTGGCTATGATCTTCCCAAGCTTATTGTCGCCATCGGATGCTACTTCTACTTATTTGAGGCGGCGGCAGGTCCTCAAGCGCCTCAACAAGCCTCCTCTCGCAACCATTCAGAGCCCAGATGGAGATATCATAGACTGTGTGCACATCTCCAGACAGCCTGCATTCGATCATCCTCTCCTCAAGGACCATACAATCCAGATGCAGCCTTCCAGCCAGCCAAGTGGCCTATATGGAGAAGCAACACGTCCATTCACCCAAACATGGAATCAGAACGGCGAAAAGTGCCCTGACAACACTATACCAATCCGAAGGACCAAGGAGGAGGATGTCATGAGGGCCACCTCTCTTACAACGTTTGGCAAGAAGACGCACGACATGAGCTCTCACCCTCACTCTCACTTGGCTGGTGTCACAAGCGGCCACTACTATGGTGTAGCATATGCAACCGGAGATGCCAACTACTACGGAACCAAAGTGACCATCAATGTGTGGCAACCAACGA]

[+] EMBL CB655695             [GGCAGCAGCGAGGACGTGGAGTAGGCGAGGCTTGGTGGCGCTCCTCCTGCTGGCTATGATCTTCCCAAGCTTATTGTCGCCATCGGATGCTACTTCTACTTATTTGAGGCGGCGGCAGGTCCTCAAGCGCCTCAACAAGCCTCCTCTCGCAACCATTCAGAGCCCAGATGGAGATATCATAGACTGTGTGCACATCTCCAGACAGCCTGCATTCGATCATCCTCTCCTCAAGGACCATACAATCCAGATGCAGCCTTCCAGCCAGCCAAGTGGCCTATATGGAGAAGCAACACGTCCATTCACCCAAACATGGAATCAGAACGGCGAAAAGTGCCCTGACAACACTATACCAATCCGAAGGACCAAGGAGGAGGATGTCATGAGGGCCACCTCTCTTACAACGTTTGGCAAGAAGACGCACGACATGAGCTCTCACCCTCACTCTCACTTGGCTGGTGTCACAAGCGGCCACTACTATGGTGTAGCATATGCAACCGGAGATGCCAACTACTACGGAACCAAAGTGACCATCAATGTGTGGCAACCAACGA]
[+] EMBL CB659590             [           GGACGTGGAGTAGGCGAGGCTTGGTGGCGCTCCTCCTGCTGGCTATGATCTTCCCAAGCTTATTGTCGCCATCGGATGCTACTTCTACTTATTTGAGGCGGCGGCAGGTCCTCAAGCGCCTCAACAAGCCTCCTCTCGCAACCATTCAGAGCCCAGATGGAGATATCATAGACTGTGTGCACATCTCCAGACAGCCTGCATTCGATCATCCTCTCCTCAAGGACCATACAATCCAGATGCAGCCTTCCAGCCAGCCAAGTGGCCTATATGGAGAAGCAACACGTCCATTCACCCAAACATGGAATCAGAACGGCGAAAAGTGCCCTGACAACACTATACCAATCCGAAGGACCAAGGAGGAGGATGTCATGAGGGCCACCTCTCTTACAACGTTTGGCAAGAAGACGCACGACATGAGCTCTCACCCTCACTCTCACTTGGCTGGTGTCACAAGCGGCCACTACTATGGTGTAGCATATGCAACCGGAGATGCCAACTACTACGGAACCAAAGTGACCATCAATGTGTGGCAACCAACGA]
[+] EMBL CB656999             [                 GGAGTCGGCGAGGCTTGGTGGCGCTCCTCCTGCTGGCTATGATCTTCCCAAGCTTATTGTCGCCATCGGATGCTACTTCTACTTATTTGAGGCGGCGGCAGGTCCTCAAGCGCCTCAACAAGCCTCCTCTCGCAACCATTCAGAGCCCAGATGGAGATATCATAGACTGTGTGCACATCTCCAGACAGCCTGCATTCGATCATCCTCTCCTCAAGGACCATACAATCCAGATGCAGCCTTCCAGCCAGCCAAGTGGCCTATATGGAGAAGCAACACGTCCATTCACCCAAACATGGAATCAGAACGGCGAAAAGTGCCCTGACAACACTATACCAATCCGAAGGACCAAGGAGGAGGATGTCATGAGGGCCACCTCTCTTACAACGTTTGGCAAGAAGACGCACGACATGAGCTCTCACCCTCACTCTCACTTGGCTGGTGTCACAAGCGGCCACTACTATGGTGTAGCATATGCAACCGGAGATGCCAACTACTACGGAACCAAAGTGACCATCAATGTGTGGCAACCAACGA]




>consensus_14008#3
GGCAGCAGCGAGGACGTGGAGTAGGCGAGGCTTGGTGGCGCTCCTCCTGCTGGCTATGAT
CTTCCCAAGCTTATTGTCGCCATCGGATGCTACTTCTACTTATTTGAGGCGGCGGCAGGT
CCTCAAGCGCCTCAACAAGCCTCCTCTCGCAACCATTCAGAGCCCAGATGGAGATATCAT
AGACTGTGTGCACATCTCCAGACAGCCTGCATTCGATCATCCTCTCCTCAAGGACCATAC
AATCCAGATGCAGCCTTCCAGCCAGCCAAGTGGCCTATATGGAGAAGCAACACGTCCATT
CACCCAAACATGGAATCAGAACGGCGAAAAGTGCCCTGACAACACTATACCAATCCGAAG
GACCAAGGAGGAGGATGTCATGAGGGCCACCTCTCTTACAACGTTTGGCAAGAAGACGCA
CGACATGAGCTCTCACCCTCACTCTCACTTGGCTGGTGTCACAAGCGGCCACTACTATGG
TGTAGCATATGCAACCGGAGATGCCAACTACTACGGAACCAAAGTGACCATCAATGTGTG
GCAACCAACGA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14008#0      ------------------------------------------------------------
consensus_14008#3      ------------------------------------------------------------
consensus_14008#1      TGATGCATATAACGAAACGGGATGTTACAACCTAGCATGCTCAGGATTCATCCAGACAAA 60
consensus_14008#2      ------------------------------------------------------------
                                                                                   

consensus_14008#0      ------------------------------------------------------------
consensus_14008#3      ------------------------------------------------------------
consensus_14008#1      CCCGCAGTTCGTCATCGGTGGCAGCATATCCCCTGTCTCCACCTATGGTGACACACAATA 120
consensus_14008#2      ------------------------------------------------------------
                                                                                   

consensus_14008#0      -----------------------------CAGCGAGCCGAAGAAGCTTAGCTTTAAGCAG 31
consensus_14008#3      -------------------------------------------------------GGCAG 5
consensus_14008#1      TGAGTACGATTATTTAGTTTGGAAGGACCCAGCGGGGGGCAATTGGTGGTTGCAAGTGCA 180
consensus_14008#2      -----------------TTTGAGACCAC-------GGGGCATT--GTGTTC---AGTCCA 31
                                                                                   

consensus_14008#0      CAGCTAGCAATGGCAGCAGCAAGGGCGTGCTTGGTGGTGGCGCTCCTCCTCCTGGTGGCT 91
consensus_14008#3      CAGCGAGGACGTGGAGTAGGCGAGG----CTTGGTGGCGCTCCTCCTGCTGGCTATGATC 61
consensus_14008#1      AGGCAATAATGTGGGCTA--CTGGCCATCATCCATCTTCACCCTCCTGCAGACAGGCGTT 238
consensus_14008#2      AGCCAATAATGTGG-CTA--CTG-CCATCATCCATCTTCACCCTCCT-CAGACAG-CGTT 85
                          * *  *   *    *            *   *       ***** *           

consensus_14008#0      CTC---------TTCTCGCCATCGGAAGCTACTTCGTCTACTTCTT--TGCGGCGGCGGC 140
consensus_14008#3      TTCCCAAGCTTATTGTCGCCATCGGATGCTACTTC---TACTTATT--TGAGGCGGCGGC 116
consensus_14008#1      GCCGACAGTGTGGAATGGGG-TGGGGAGGTGAATTCGCCTCAAATTACCACACCCATGGG 297
consensus_14008#2      -CCGACAGTGTGGAATGGGGGTGGGGAGGTGGATTCGCCTCAAATTACCACACCCATGGG 144
                         *            * *   * **  * *   *      *   **       *   ** 

consensus_14008#0      AGGTGCGGAGCCTCCTCAAGC--GCCTCAACAAGCCTCCCCTCGCAACCTTTCAGAGCCT 198
consensus_14008#3      AGGT---------CCTCAAGC--GCCTCAACAAGCCTCCTCTCGCAACCATTCAGAGCCC 165
consensus_14008#1      TAGTGGACATTTTCCTGAGGAAGGGTTCGGCAAGG--CCACCTACAGCAGAGCA-ATCCA 354
consensus_14008#2      TAGTGGACATTTTCCTGAGGAAGGGTTCGGCAAGG--CCACCTATAGCAGAGCA-ATCCA 201
                         **         *** * *   *  **  ****   ** *    * *    ** * ** 

consensus_14008#0      AGATGGAGATATCATAGATTGTGTGCACATCTCCAATCAACCTGCATTCGACCA-TCCTC 257
consensus_14008#3      AGATGGAGATATCATAGACTGTGTGCACATCTCCAGACAGCCTGCATTCGATCA-TCCTC 224
consensus_14008#1      AGTTGTTGATTCCTCCAACAATCT-CAAACCACCAAATGGTGTGGGCTTGATAGCTCCGT 413
consensus_14008#2      AGTTGTTGATTCCTCCAACAATCT-CAAACCACCAAATGGTGTGGGCTTGATAGCTCCGT 260
                       ** **  ***  *    *   * * ** * * ***       **   * **    ***  

consensus_14008#0      TTCTCAAGGACCATACAATCCAGATGCGACCTTCTAT-----CCAGCCAAGTGGCCTA-- 310
consensus_14008#3      TCCTCAAGGACCATACAATCCAGATGCAGCCTTCCAG-----CCAGCCAAGTGGCCTA-- 277
consensus_14008#1      TGCCCAGTTGCTATAACGTCATGACTGGTTCCTCCAGTACCACCAGTTGGGGCACTTACA 473
consensus_14008#2      TGCCCAGTTGCTATAACGTCATGACTGGTTCCTCCAGTACCACCAGTTGGGGCACTTACA 320
                       * * **    * ***   **  **      * ** *      ****    *   * **  

consensus_14008#0      -----TATGGAGAAGCAACACGTCCATTCA---CCCAAACATGGAAT----CAGAAT--G 356
consensus_14008#3      -----TATGGAGAAGCAACACGTCCATTCA---CCCAAACATGGAAT----CAGAAC--G 323
consensus_14008#1      TCTACTATGGCGGGCCTGGGTGCCCTCAAAACTCTCAAATT-GAAGTGATGTAGAGA--G 530
consensus_14008#2      TCTACTATGGTGGGCCTGGGTGCCCTCAAA-CTCTCAAATTTGAAGTGATGTAGAGACAG 379
                            ***** *   *     * **    *   * ****   * * *     ***    *

consensus_14008#0      GCGAAAAGTGCCC-TGACAATACTATACCGATCCGAAGGACCAAGGAGGAGGATGTCATG 415
consensus_14008#3      GCGAAAAGTGCCC-TGACAACACTATACCAATCCGAAGGACCAAGGAGGAGGATGTCATG 382
consensus_14008#1      ATCGATCGTGCTCGCCATCAAACTACCTACATCTCCTTAAT-AATTTACATCTAGTACTA 589
consensus_14008#2      ATCGATCGAGCTCGCCATCAAACTACCTACATCCCCTTAAT-AATTTGCATCTAGTACTA 438
                           *  * ** *   *  * ****     ***      *  **     *    **  * 

consensus_14008#0      AGGGCCACCTCTGTTACAACGTTTGGCAAGAAGACGCACGGCGGGAGCCCTCACCCTCAC 475
consensus_14008#3      AGGGCCACCTCTCTTACAACGTTTGGCAAGAAGACGCACGACATGAGCTCTCACCCTCAC 442
consensus_14008#1      CATGCGCCCAATAATAAAGTATT-ATTAGCTAGGGTCTA--TACTAGCTAATAG---TAC 643
consensus_14008#2      CATGCGCCCAATAATAAAGTATTTATTAGCTGGGGTCTTATTACTAGCTAATAG---TAC 495
                          **  **  *  ** *   **    *    *   *        ***    *     **

consensus_14008#0      TCTCACTTGGGTGGTGTCACGGACGGCCACCACTATGGTGTA-GCATATGCGACTGGGGA 534
consensus_14008#3      TCTCACTTGGCTGGTGTCACAAGCGGCCACTACTATGGTGTA-GCATATGCAACCGGAGA 501
consensus_14008#1      A-TGTCTCATTTCATG-CTCTGGTTGCTAGTACGTACGTGTATGTATACATTTGCATGTA 701
consensus_14008#2      AATTTCTCCTTTCATGGCTCTGGTTGCTAGTACTTATGTATATGTAAACTTTGCCATGTA 555
                         *  **    *  ** * *     ** *  **    ** ** * * *           *

consensus_14008#0      TTCCAACTACTACGGAACCAAAGTGACCA-TCAATGTGTGGCAACCAACGATTGCAACAT 593
consensus_14008#3      TGCCAACTACTACGGAACCAAAGTGACCA-TCAATGTGTGGCAACCAACGA--------- 551
consensus_14008#1      TATGTAAGAGGTTTGAACCAAGCTAGCAAATAAATGTATTGTTACAGTTTACTAAAAATT 761
consensus_14008#2      TTTGTAAGAGTTTTGAACCA-GCTACCAA-TAAATGTATTGTTAC-GTTTACGGGAAAAA 612
                       *    *  *     ******   *  * * * ***** * *  **     *         

consensus_14008#0      TCGGTGATTTCAGCTTGTCCCAGCTATGGATCACAGCGGGCTCCTATGAAAACAAGGACC 653
consensus_14008#3      ------------------------------------------------------------
consensus_14008#1      AAAAAGA----------------------------------------------------- 768
consensus_14008#2      ------------------------------------------------------------
                                                                                   

consensus_14008#0      TTAATACCATTGAAGCAGGATGGCAGGTGTACCCAGCTATGTACGGGGATGATAAAACTA 713
consensus_14008#3      ------------------------------------------------------------
consensus_14008#1      ------------------------------------------------------------
consensus_14008#2      ------------------------------------------------------------
                                                                                   

consensus_14008#0      GACTCTTCATCTATTGGACTCGTGATGCATATAACACAACGGGATGTTACAATCTAGCGT 773
consensus_14008#3      ------------------------------------------------------------
consensus_14008#1      ------------------------------------------------------------
consensus_14008#2      ------------------------------------------------------------
                                                                                   

consensus_14008#0      GCTCAGGGTTCATCCAGACAAACCCGCAGTTCGTCATCGGTGGCAGCTTATCCCCTGTCT 833
consensus_14008#3      ------------------------------------------------------------
consensus_14008#1      ------------------------------------------------------------
consensus_14008#2      ------------------------------------------------------------
                                                                                   

consensus_14008#0      CCATCTATGGCAGCACACAATATGAGTATGATTATTTAGTTTGGAAGGACCCAGCGGGGG 893
consensus_14008#3      ------------------------------------------------------------
consensus_14008#1      ------------------------------------------------------------
consensus_14008#2      ------------------------------------------------------------
                                                                                   

consensus_14008#0      GCAACTGGTGGTTGCAACTGCAAGGCAATTATGTGGGCTACTGGCCATCATCCATCTTTA 953
consensus_14008#3      ------------------------------------------------------------
consensus_14008#1      ------------------------------------------------------------
consensus_14008#2      ------------------------------------------------------------
                                                                                   

consensus_14008#0      CCCTCCTGCAGACAGGCGTTGCCGATACTGTGGAATGGGGTGGGGAGGTGTATTCTCCTC 1013
consensus_14008#3      ------------------------------------------------------------
consensus_14008#1      ------------------------------------------------------------
consensus_14008#2      ------------------------------------------------------------
                                                                                   

consensus_14008#0      AAATTACCGCACCCATGGGCAGTGGACATTTCCCTGAGGAAGGGTTTGGCAAGGCCACCT 1073
consensus_14008#3      ------------------------------------------------------------
consensus_14008#1      ------------------------------------------------------------
consensus_14008#2      ------------------------------------------------------------
                                                                                   

consensus_14008#0      ACAGTAGAGCAATCCAAGTTGTTGATTCCTCCAACCATCTCAAACCACCAAATGGTGTGG 1133
consensus_14008#3      ------------------------------------------------------------
consensus_14008#1      ------------------------------------------------------------
consensus_14008#2      ------------------------------------------------------------
                                                                                   

consensus_14008#0      GCTTGATAGCCTCGCTGCCCAATTGCTATAATATCATGACTGGTTCCTCCAGTACCACTA 1193
consensus_14008#3      ------------------------------------------------------------
consensus_14008#1      ------------------------------------------------------------
consensus_14008#2      ------------------------------------------------------------
                                                                                   

consensus_14008#0      GTTGGGGCACTTACATTTACTATGGTGGACCTGGGTGCCCTCAAAACTCCCAAATTGAAG 1253
consensus_14008#3      ------------------------------------------------------------
consensus_14008#1      ------------------------------------------------------------
consensus_14008#2      ------------------------------------------------------------
                                                                                   

consensus_14008#0      TGATGTAGAGAGAGATCGAGCTCACGATCAAACTACGTACATCACATTAATAATTTACAT 1313
consensus_14008#3      ------------------------------------------------------------
consensus_14008#1      ------------------------------------------------------------
consensus_14008#2      ------------------------------------------------------------
                                                                                   

consensus_14008#0      GTAGTACTACACGATCAACATCGCTCGCTCGCCCAATAATATAGTATTGTTGGATAGGGT 1373
consensus_14008#3      ------------------------------------------------------------
consensus_14008#1      ------------------------------------------------------------
consensus_14008#2      ------------------------------------------------------------
                                                                                   

consensus_14008#0      CTATACTAGCTAATATTACATGCCGCATGTCAAGCTCTGATTGCTAGTACGTATGTATAT 1433
consensus_14008#3      ------------------------------------------------------------
consensus_14008#1      ------------------------------------------------------------
consensus_14008#2      ------------------------------------------------------------
                                                                                   

consensus_14008#0      GTATACATTTGCATGTATTGGTAAGAGGTTTGAACCAAGCTAGCATTACAAGCTGGCAAT 1493
consensus_14008#3      ------------------------------------------------------------
consensus_14008#1      ------------------------------------------------------------
consensus_14008#2      ------------------------------------------------------------
                                                                                   

consensus_14008#0      AAATGTATTGTCACAGTTTACTGGAAGTTATGTTATGGAATAAAAAAAAA 1543
consensus_14008#3      --------------------------------------------------
consensus_14008#1      --------------------------------------------------
consensus_14008#2      --------------------------------------------------