Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 14009 cluster # 14009       Sequences # 14       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_14009#0 length = 1220 sequences # 10  
consensus_14009#1 length = 389 sequences # 4  

consensusID : consensus_14009#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 1220
fasta sequence
                              [ATATTCAGCACATCGCCGGCTCGCCTCTCCGCCGCCGCCGCCGCCGCAGTCGCCGCCGCCTGCCTCTCCTCGCCGCCGTCCGATGCGGGCCCTCCTGCGCGCCGCGTCGGTGCTCCGCCGCGCGGCGGCTCCGGCCCTCGGCGGCGGCCGCGCCGCGCCGCTTCCCCCCAAGAACTTGCCTGCTGTCTGTTTGAATGGGTATTCTACTCTTTTGGCTCCAGCAAATGAAGTGCTGATTCCACAAGAACTTCTATCCAGCAAGACTGTTTGGACTCCAGATCGTGAGCTTGGGCAGTATGAAGACCTAGTAGCCCGAGTAACAAACTTCCACAATGAGGATAAGGGCTTCATGGTTTTAGATGGTGATGTTTTTGATGTTCCAATCAGGAAGGATATTGTTCATAGAGTAGTAAGGTGGCAACTCGCTAAAAGACAGCAGGGAACACACTCAACTAAAACTATCAGTGAAGTGAGCGGCACAGGAAGAAAACCTTACAATCAAAAAGGAACTGGCAGAGCACGACATGGTACACTGCGCGGCCCTCAGTTTCGCGGTGGTGCAACCATGCATGGGCCTAAACCACGAAGTCATGCGATTAAGTTGCAGAAGAAAGTACGGCGTCTGGGACTTAAGATAGCATTATCTGCTCGAACCGCTGAGGGAAAGCTCTTGGTCTTTGATGACCTCGAAGTTCCTAGCCACAAGACAAAAAACATTGTGCAGTACATTGGCCAGATGGAAGGCACAAAGAAGGTTTTGTTGGTAGATGGAGGTGACATTGATAAGAAGTTAAAGCTGGCTACCCAGAATCTTCACTATGTGAATGTTCTTCCATCCATTGGCCTAAATGTATACAGCATCCTTC-AACATGACACTCTTGTAATGACGCGGAATGCTATC-AATAGAATTGTTGAGCGTATGCACACCCCCATCAGCCGCTAGCATGTTGAGATTCGACGTGAACA-CCACTGTTTTGTAGCAGATGTACTTCGACCCCCTAAAGCTTCATGCATGCCAGTTTTCACTTTGCTGGTGTAAGGCATTAGCAACAACACAATTTTCCTTTTCCTTTTTGAAAATGATCTATTTGCTTCTGCTAGTGATTTCAG-TGAACCATGTTGCGTCAGATCCAATACATCAAAGTAGGAAGTGAATTGGTCATCATTTTGGTCATCATGGTGTGCGCTCAGGACTCCAGATTTCTAATAAAGACAGTTCT]

[+] EMBL AK069751             [ATATTCAGCACATCGCCGGCTCGCCTCTCCGCCGCCGCCGCCGCCGCAGTCGCCGCCGCCTGCCTCTCCTCGCCGCCGTCCGATGCGGGCCCTCCTGCGCGCCGCGTCGGTGCTCCGCCGCGCGGCGGCTCCGGCCCTCGGCGGCGGCCGCGCCGCGCCGCTTCCCCCCAAGAACTTGCCTGCTGTCTGTTTGAATGGGTATTCTACTCTTTTGGCTCCAGCAAATGAAGTGCTGATTCCACAAGAACTTCTATCCAGCAAGACTGTTTGGACTCCAGATCGTGAGCTTGGGCAGTATGAAGACCTAGTAGCCCGAGTAACAAACTTCCACAATGAGGATAAGGGCTTCATGGTTTTAGATGGTGATGTTTTTGATGTTCCAATCAGGAAGGATATTGTTCATAGAGTAGTAAGGTGGCAACTCGCTAAAAGACAGCAGGGAACACACTCAACTAAAACTATCAGTGAAGTGAGCGGCACAGGAAGAAAACCTTACAATCAAAAAGGAACTGGCAGAGCACGACATGGTACACTGCGCGGCCCTCAGTTTCGCGGTGGTGCAACCATGCATGGGCCTAAACCACGAAGTCATGCGATTAAGTTGCAGAAGAAAGTACGGCGTCTGGGACTTAAGATAGCATTATCTGCTCGAACCGCTGAGGGAAAGCTCTTGGTCTTTGATGACCTCGAAGTTCCTAGCCACAAGACAAAAAACATTGTGCAGTACATTGGCCAGATGGAAGGCACAAAGAAGGTTTTGTTGGTAGATGGAGGTGACATTGATAAGAAGTTAAAGCTGGCTACCCAGAATCTTCACTATGTGAATGTTCTTCCATCCATTGGCCTAAATGTATACAGCATCCTTC AACATGACACTCTTGAAATGACGCGGAATGCTATC AATAGAATTGTTGAGCGTATGCACACCCCCATCAGCCGCTAGCATGTTGAGATTCGACGTGAACA CCACTGTTTTGTAGCAGATGTACTTCGACCCCCTAAAGCTTCATGCATGCCAGTTTTCACTTTGCTGGTGTAAGGCATTAGCAACAACACAATTTTCCTTTTCCTTTTTGAAAATGATCTATTTGCTTCTGCTAGTGATTTCAG TGAACCATGTTGCGTCAGATCCAATACATC                                                                                ]
[+] EMBL CB652691             [                            CCGCCGCCGCCGCCGCCGCCGTCGCCGCCGCCTGCCTCTCCTCGCCGCCGTCCGATGCGGGCCCTCCTGCGCGCCGCGTCGGTGCTCCGCCGCGCGGCGGCTCCGGCCCTCGGCGGCGGCCGCGCCGCGCCGCTTCCCCCCAAGAACTTGCCTGCTGTCTGTTTGAATGGGTATTCTACTCTTTTGGCTCCAGCAAATGAAGTGCTGATTCCACAAGAACTTCTATCCAGCAAGACTGTTTGGACTCCAGATCGTGAGCTTGGGCAGTATGAAGACCTAGTAGCCCGAGTAACAAACTTCCACAATGAGGATAAGGGCTTCATGGTTTTAGATGGTGATGTTTTTGATGTTCCAATCAGGAAGGATATTGTTCATAGAGTAGTAAGGTGGCAACTCGCTAAAAGACAGCAGGGAACACACTCAACTAAAACTATCAGTGAAGTGAGCGGCACAGGAAGAAAACCTTACAATCAAAAAGGAACTGGCAGAGCACGACATGGTACACTGCGCGGCCCTCAGTTTCGCGGTGGTGCAACCATGCATGGGCCTAAACCACGAAGTCATGCGATTAAGTTGCAGAAGAAAGTACGGCGTCTGGGACTTAAGATAGCATTATCTGCTCGAACCGCTGAGGGAAAGCTCTTGGTCTTTGATGACCTCGAAGTTCCTAGCCACAAGACAAAAAACATTGTGCAGTACATTGGCCAGATGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AU088587             [                                                                                                                                                                CTTCCCCCCAAGAACTTGCCTGCTGTCTGTTTGAATGGGTATTCTACTCTTTTGGCTCCAGCAAATGAAGTGCTGATTCCACAAGAACTTCTATCCAGCAAGACTGTTTGGACTCCAGATCGTGAGCTTGGGCAGTATGAAGACCTAGTAGCCCGAGTAACAAACTTCCACAATGAGGATAAGGGCTTCATGGTTTTAGATGGTGATGTTTTTGATGTTCCAATCAGGAAGGATATTGTTCATAGAGTAGTAAGGTGGCAACTCGCTAAAAGACAGCAGGGAACACACTCAACTAAAACTATCAGTGAAGTGAGCGGCACAGGAAGAAAACCTTACAATCAAAAAGGAACTGGCAGAGCACGACATGGTACACTGCGCGGCCCTCAGTTTCGCGGTGGTGCAACCATGCATGGGCCTAAACCACGAAGTCATGCGATTAAGTTGCAGAAGAAAGTACGGCGTCTGGGACTTAAGATAGCATTATCTGCTCGAACCGCTGAGGGAAAGCTCTTGGTCTTTGATGACCTCGAAGTTCCTAGCCACAAGACAAAAAACATTGTGCAGTACATTGGCCAGATGGAAGGCACAAAGAAGGTTTTGTTGGTAGATGGAGGTGACATTGATAAGAAGTTAAAGCTGGCTACCCAGAATCTTCACTATGTGAATGGTCTTCCATCCATTGGCCTAA                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL OSR25921A            [                                                                                                                                                                                   CTGCTGTCTGTTTGAATGGGTATTCTACTCTTTTGGCTCCAGCAAATGAAGTGCTGATTCCACAAGAACTTCTATCCAGCAAGACTGTTTGGACTCCAGATCGTGAGCTTGGGCAGTATGAAGACCTAGTAGCCCGAGTAACAAACTTCCACAATGAGGATAAGGGCTTCATGGTTTTAGATGGTGATGTTTTTGATGTTCCAATCAGGAAGGATATTGTTCATAGAGTAGTAAGGTGGCAACTCGCTAAAAGACAGCAGGGAACACACTCAACTAAAACTATCAGTGAAGTta                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL OSR14752A            [                                                                                                                                                                                   CTNCTGTCTGTTTGAATGGGTATTCTACTCTTTTGGCTCCAGCAAATGAAGTGCTGATTCCACAAGAACTTCTATCCAGCAAGACTGTTTGGACTCCAGATCGTGAGCTTGGGCAGTATGAAGACCTAGTAGCCCGAGTAACAAACTTCCACAATGAGGATAAGGGCTTCATGGTTTTAGATGGTGATGTTTTTGATGTTCCAATCAGGAAGGATATTGTTCATAGAGTAGTAAGGTGGCAACTCGCTAAANGACAGCAGGGAACACACTCAACTAAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CB652692             [                                                                                                                                                                                                                                                                                                                                                                                                                                         CTAAAAGACAGCAGGGAACACTCTCAACTAAAACTATCAGTGAAGTGAGCGGCACAGGAAGAAAACCTTACAATCAAAAAGGAACTGGCAGAGCACGACATGGTTCATTGCGCGGCCCTCAGTTTCGCGGTGGTGCAACCATGCATGGGCCTATACCACGAAGTCATGCGATTAAGTTGCAGAAGAAAGTACGGCGTCTGGGACTTAAGATAGCATTATCTGCTCGACCCGCTGAGGGAAAGCTCTTGGTCTTTGATGACCTCGAAGTTCTTAGCCACAAGACAAAAAACATTGTGCAGTTCATTGGCCAGATGGAAGGCACAAAGAAGGTTTTGTTGGTAGATGGAGGTGACATTGATAAGAAGTTAAAGCTGGCTACCCAGAATCTTCACTATGTGAATGTTCTTCCATCCATTGGCCTAAATGTATTCAGCATCCTTC AACATGACCCTCTTGTAATGACGCGGAATGCTATC AATAGAATTGTTGAGCGTATGCACACCCCCATCAGCCGATAGCATGTTGAGATTCGACGTGAACA CCACTGTTTTGTAGCAGATGTACTTCGACCCCCTAAAGCTTCATGCATGCCAGTTTTCACTTTGCTGGTGTAAGGCATTAGCAACAACACAATTTTCCTTTTCCTTTTTGAAAATGATCTATTTGCTTGTGGTAGTGATTTCAG TGAACCATGTTGCGTCAGATCCAATACATCA                                                                               ]
[-] EMBL CB618660             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GGTGCAACCATGCATGGGCGTAAACCACGAAGTCATGCGATTAAGTTGCAGAAGAAAGTACGGCGTCTGGGACTTAAGATAGCATTATCTGCTCGAACCGCTGAGGGAAAGCTCTTGGTCTTTGATGACCTCGAAGTTCCTAGCCACAAGACAAAAAACATTGTGCAGTACATTGGCCAGATGGAAGGCACAAAGAAGGTTTTGTTGGTAGATGGAGGTGACATTGATAAGAAGTTAAAGCTGGCTACCCAGAATCTTCACTATGTGAATGTTCTTCCATCCATTGGCCTAAATGTATACAGCATCCTTC AACATGACACTCTTGTAATGACGCGAAATGCTATC AATAGAATTGTTGAGCGTATGCACACCCCCATCAGCCGCTAGCATGTTGAGATTCGACGTGAACA CCACTGTTTTGTAGCAGATGTACTTCGACCCCCTAAAGCTTCATGCATGCCAGTTTTCACTTTGCTGGTGTAAGGCATTAGCAACAACACAATTTTCCTTTTCCTTTTTGAAAATGATCTATTTGCTTCTGCTAGTGATTTCAG TGAACCATGTTACGTCAGATCCAATACATCAAAGTAGGAAGTGAATTGGTCATCATTTTGGTCATCATGGTGTGCGCTCAGGACTCCAGATTTCTAATAAAGACAGTTCT]
[-] EMBL CB640702             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            AGCATTATCTGCTCGAACCGCTGAGGGAAAGCTCTTGGTCTTTGATGACCTCGAAGTTCCTAGCCACAAGACAAAAAACATTGTGCAGTACATTGGCCAGATGGAAGGCACAAAGAAGGTTTTGTTGGTAGATGGAGGTGACATTGATAAGAAGTTAAAGCTGGCTACCCAGAATCTTCACTATGTGAATGTTCTTCCATCCATTGGCCTAAATGTATACAGCATCCTTC AACATGACACTCTTGTAATGACGCGGAATGCTATC AATAGAATTGTTGAGCGTATGCACACCCCCATCAGCCGCTAGCATGTTGAGATTCGACGTGAACAGCGGGTGTTTTGTAGCAGATGTACTTCGACCCCCTAAAGCTTCATGCATGCCAGTTTTCACTTTGCTGGTGTAAGGCATTAGCAACAACACAATTTTCCTTTTCCTTTTTGAAAATGATCTATTTGCTTCTGCTAGTGATTTCAGNTGAACCATGTTGCGTCAGATCCAATACATCA                                                                               ]
[+] EMBL BI799870             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GTACATTGGCCAGATGGAAGGCAC AAGAAGGTTTTGTTGGTAGATGGAGGTGACATTGATAAGAAGTTAAAGCTGGCTACCCAGAATCTTCACTATGTGAATGTTCTTCCATCCATTGGCCTAAATGTATACAGCATCCTTC AACATGACACTCTTGTAATGACGCGGAATGCTATC AATAGAATTGTTGAGCGTATGCACACCCCCATCAGCCGCTAGCATGTTGAGATTCGACGTGAACA CCACTGTTTTGTAGCAGATGTACTTCGACCCCCTAAAGCTTCATGCATGCCAGTTTTCACTTTGCTGGTGTAAGGCATTAGCAACAACAC ATTTTCCTTTTCCTTTTTGAAAATGATCTATTTGCTTCTGCTAGTGATTTCAG TGAACCATGTTGCGTCAGATCCAATACAT                                                                                 ]
[+] EMBL C97228               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GGCCTAAATGTATACAGCATCCTTCAAACATGACACTCTTGTAATGACGCGGAATGCTATCAAATAGAATTGTTGAGCGTATGCACACCCCCATCAGCCGCTAGCATGTTGAGATTCGACGTGAACA CCACTGTTTTGTAGNAGATGTACTTCGACCCCCTAAAGCTTCATGCATGCCAGTTTTCACTTTGCTGGTGTAAGGCATTAGCAACAACACAATTTTCCTTTTCCTTTTTGAAAATGATCTATTTGCTTCTGCTAGTGATTTCAG TGAACCATGTTGCGTCAGATCCAATACATC                                                                                ]


>consensus_14009#0 ATATTCAGCACATCGCCGGCTCGCCTCTCCGCCGCCGCCGCCGCCGCAGTCGCCGCCGCC TGCCTCTCCTCGCCGCCGTCCGATGCGGGCCCTCCTGCGCGCCGCGTCGGTGCTCCGCCG CGCGGCGGCTCCGGCCCTCGGCGGCGGCCGCGCCGCGCCGCTTCCCCCCAAGAACTTGCC TGCTGTCTGTTTGAATGGGTATTCTACTCTTTTGGCTCCAGCAAATGAAGTGCTGATTCC ACAAGAACTTCTATCCAGCAAGACTGTTTGGACTCCAGATCGTGAGCTTGGGCAGTATGA AGACCTAGTAGCCCGAGTAACAAACTTCCACAATGAGGATAAGGGCTTCATGGTTTTAGA TGGTGATGTTTTTGATGTTCCAATCAGGAAGGATATTGTTCATAGAGTAGTAAGGTGGCA ACTCGCTAAAAGACAGCAGGGAACACACTCAACTAAAACTATCAGTGAAGTGAGCGGCAC AGGAAGAAAACCTTACAATCAAAAAGGAACTGGCAGAGCACGACATGGTACACTGCGCGG CCCTCAGTTTCGCGGTGGTGCAACCATGCATGGGCCTAAACCACGAAGTCATGCGATTAA GTTGCAGAAGAAAGTACGGCGTCTGGGACTTAAGATAGCATTATCTGCTCGAACCGCTGA GGGAAAGCTCTTGGTCTTTGATGACCTCGAAGTTCCTAGCCACAAGACAAAAAACATTGT GCAGTACATTGGCCAGATGGAAGGCACAAAGAAGGTTTTGTTGGTAGATGGAGGTGACAT TGATAAGAAGTTAAAGCTGGCTACCCAGAATCTTCACTATGTGAATGTTCTTCCATCCAT TGGCCTAAATGTATACAGCATCCTTCAACATGACACTCTTGTAATGACGCGGAATGCTAT CAATAGAATTGTTGAGCGTATGCACACCCCCATCAGCCGCTAGCATGTTGAGATTCGACG TGAACACCACTGTTTTGTAGCAGATGTACTTCGACCCCCTAAAGCTTCATGCATGCCAGT TTTCACTTTGCTGGTGTAAGGCATTAGCAACAACACAATTTTCCTTTTCCTTTTTGAAAA TGATCTATTTGCTTCTGCTAGTGATTTCAGTGAACCATGTTGCGTCAGATCCAATACATC AAAGTAGGAAGTGAATTGGTCATCATTTTGGTCATCATGGTGTGCGCTCAGGACTCCAGA TTTCTAATAAAGACAGTTCT



consensusID : consensus_14009#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 389
fasta sequence
                              [GGGAATAGCTGCGGCGCGCCGGCCGCTTCCCCACGAGAACTTG-CTGCTGTCTGTTTGAATGGGTATTCTACTCTTTTGGCTCCAGCAAATGAAGTGCTGATTCCACAAGAACTTCTATCCAGCAAGACTGTTTGGACTCCAAATCGTGAGCTTGGGCAGTATGAAGACCTAGTAGCCCGAGTAACAAACTTCCACAATGAGGATAAGGGCTTCATGGTTTTAGATGGTGATGTTTTTGATGTTCCAATCAGGAAGGATATTGTTCATAGAGTAGTAAGGTGGCAACTCGCTAAAAGACAGCAGGGAACACACTCAACTAAAACTATCAGTGAAGTGAGTGGCACAGGAAGAAAACCTTACAAAAAAAAAAAAAAAAAACAGAGCGGCCG]

[+] EMBL CB966189             [GGGAATAGCTGCGGCGCGCCGGCCGC TCCCCACGAGAAC TG CTGCTGTCTG TTGAATGGGTA TCTACTC TTTGGCTCCAGCAAATGAAGTGCTGATTCCACAAGAACTTCTATCCAGCAAGACTGTTTGGACTCCAAATCGTGAGCTTGGGCAGTATGAAGACCTAGTAGCCCGAGTAACAAACTTCCACAATGAGGATAAGGGCTTCATGGTTTTAGATGGTGATGTTTTTGATGTTCCAATCAGGAAGGATATNGTTCATAGAGTAGTAAGGTGGCAACTCGCTAAAAGACAGCAGGGAACACACTCAACTAAAACTATCAGTGAAGTGAGTGGCACAGGAAGAAAACCTTACAAAAAAAAAAAAAAAAAACA         ]
[+] EMBL CB966665             [                       CGCTTCCCCACGAGAACTTG CTGCTGTCTGTTTGAATGGGTATTCTACTCTTTTGGCTCCAGCAAATGAAGTGCTGATTCCACAAGAACTTCTATCCAGCAAGACTGTTTGGACTCCAAATCGTGAGCTTGGGCAGTATGAAGACCTAGTAGCCCGAGTAACAAACTTCCACAATGAGGATAAGGGCTTCATGGTTTTAGATGGTGATGTTTTTGATGTTCCAATCAGGAAGGATATTGTTCATAGAGTAGTAAGGTGGCAACTCGCTAAAAGACAGCAGGGAACACACTCAACTAAAACTATCAGTGAAGTGAGTGGCACAGGAAGAAAACCTTACAAAAAAAAAAAAAAAAAACA         ]
[+] EMBL BI305791             [                         CTTCCCCACCATAACTTGCCTGCTGTCTGTTTGAATGGGTATTCTACTCTTTTGGCTCCAGCAAATGAAGTGCTGATTCCACAAGAACTTCTATCCAGCAAGACTGTTTGGACTCCAAATCGTGAGCTTGGGCAGTATGAAGACCTAGTAGCCCGAGTAACAAACTTCCACAATGAGGATAAGGGCTTCATGGTTTTAGATGGTGATGTTTTTGATGTTCCAATCAGGAAGGATATTGTTCATAGAGTAGTAAGGTGGCAACTCGCTAAAAGACAGCAGGGAACACACTCAACTAAAACTATCAGTGAAGTGAGTGGCACAGGAAGAAAACCTTACAAAAAAAAAAAAAAAAAACAGAGCGGCCG]
[+] EMBL BI306741             [                         CTTCCCCACGAGAACTTGCCTGCTGTCTGTTTGAATGGGTATTCTACTCTTTTGGCTCCAGCAAATGAAGTGCTGATTCCACAAGAACTTCTATCCAGCAAGACTGTTTGGACTCCAAATCGTGAGCTTGGGCAGTATGAAGACCTAGTAGCCCGAGTAACAAACTTCCACAATGAGGATAAGGGCTTCATGGTTTTAGATGGTGATGTTTTTGATGTTCCAATCAGGAAGGATATTGTTCATAGAGTAGTAAGGTGGCAACTCGCTAAAAGACAGCAGGGAACACACTCAACTAAAACTATCAGTGAAGTGAGTGGCACAGGAAGAAAACCTTACAAAAAAAAAAAAAAAAAACAGAGCGGCCG]


>consensus_14009#1 GGGAATAGCTGCGGCGCGCCGGCCGCTTCCCCACGAGAACTTGCTGCTGTCTGTTTGAAT GGGTATTCTACTCTTTTGGCTCCAGCAAATGAAGTGCTGATTCCACAAGAACTTCTATCC AGCAAGACTGTTTGGACTCCAAATCGTGAGCTTGGGCAGTATGAAGACCTAGTAGCCCGA GTAACAAACTTCCACAATGAGGATAAGGGCTTCATGGTTTTAGATGGTGATGTTTTTGAT GTTCCAATCAGGAAGGATATTGTTCATAGAGTAGTAAGGTGGCAACTCGCTAAAAGACAG CAGGGAACACACTCAACTAAAACTATCAGTGAAGTGAGTGGCACAGGAAGAAAACCTTAC AAAAAAAAAAAAAAAAAACAGAGCGGCCG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14009#0      ATATTCAGCACATCGCCGGCTCGCCTCTCCGCCGCCGCCGCCGCCGCAGTCGCCGCCGCC 60
consensus_14009#1      ------------------------------------------------------------
                                                                                   

consensus_14009#0      TGCCTCTCCTCGCCGCCGTCCGATGCGGGCCCTCCTGCGCGCCGCGTCGGTGCTCCGCCG 120
consensus_14009#1      ------------------------------------------------------------
                                                                                   

consensus_14009#0      CGCGGCGGCTCCGGCCCTCGGCGGCGGCCGCGCCGCGCCGCTTCCCCCCAAGAACTTGCC 180
consensus_14009#1      -------------GGGAATAGCTGCGGC-GCGCCG-GCCGCTTCCCCACGAGAACTTGC- 44
                                    *      ** ***** ****** *********** * ********* 

consensus_14009#0      TGCTGTCTGTTTGAATGGGTATTCTACTCTTTTGGCTCCAGCAAATGAAGTGCTGATTCC 240
consensus_14009#1      TGCTGTCTGTTTGAATGGGTATTCTACTCTTTTGGCTCCAGCAAATGAAGTGCTGATTCC 104
                       ************************************************************

consensus_14009#0      ACAAGAACTTCTATCCAGCAAGACTGTTTGGACTCCAGATCGTGAGCTTGGGCAGTATGA 300
consensus_14009#1      ACAAGAACTTCTATCCAGCAAGACTGTTTGGACTCCAAATCGTGAGCTTGGGCAGTATGA 164
                       ************************************* **********************

consensus_14009#0      AGACCTAGTAGCCCGAGTAACAAACTTCCACAATGAGGATAAGGGCTTCATGGTTTTAGA 360
consensus_14009#1      AGACCTAGTAGCCCGAGTAACAAACTTCCACAATGAGGATAAGGGCTTCATGGTTTTAGA 224
                       ************************************************************

consensus_14009#0      TGGTGATGTTTTTGATGTTCCAATCAGGAAGGATATTGTTCATAGAGTAGTAAGGTGGCA 420
consensus_14009#1      TGGTGATGTTTTTGATGTTCCAATCAGGAAGGATATTGTTCATAGAGTAGTAAGGTGGCA 284
                       ************************************************************

consensus_14009#0      ACTCGCTAAAAGACAGCAGGGAACACACTCAACTAAAACTATCAGTGAAGTGAGCGGCAC 480
consensus_14009#1      ACTCGCTAAAAGACAGCAGGGAACACACTCAACTAAAACTATCAGTGAAGTGAGTGGCAC 344
                       ****************************************************** *****

consensus_14009#0      AGGAAGAAAACCTTACAATCAAAAAGGAACTGG-CAGAGCACGACATGGTACACTGCGCG 539
consensus_14009#1      AGGAAGAAAACCTTACAAAAAAAAAAAAAAAAAACAGAGCG-GCCG-------------- 389
                       ******************  *****  **     ******  * *               

consensus_14009#0      GCCCTCAGTTTCGCGGTGGTGCAACCATGCATGGGCCTAAACCACGAAGTCATGCGATTA 599
consensus_14009#1      ------------------------------------------------------------
                                                                                   

consensus_14009#0      AGTTGCAGAAGAAAGTACGGCGTCTGGGACTTAAGATAGCATTATCTGCTCGAACCGCTG 659
consensus_14009#1      ------------------------------------------------------------
                                                                                   

consensus_14009#0      AGGGAAAGCTCTTGGTCTTTGATGACCTCGAAGTTCCTAGCCACAAGACAAAAAACATTG 719
consensus_14009#1      ------------------------------------------------------------
                                                                                   

consensus_14009#0      TGCAGTACATTGGCCAGATGGAAGGCACAAAGAAGGTTTTGTTGGTAGATGGAGGTGACA 779
consensus_14009#1      ------------------------------------------------------------
                                                                                   

consensus_14009#0      TTGATAAGAAGTTAAAGCTGGCTACCCAGAATCTTCACTATGTGAATGTTCTTCCATCCA 839
consensus_14009#1      ------------------------------------------------------------
                                                                                   

consensus_14009#0      TTGGCCTAAATGTATACAGCATCCTTCAACATGACACTCTTGTAATGACGCGGAATGCTA 899
consensus_14009#1      ------------------------------------------------------------
                                                                                   

consensus_14009#0      TCAATAGAATTGTTGAGCGTATGCACACCCCCATCAGCCGCTAGCATGTTGAGATTCGAC 959
consensus_14009#1      ------------------------------------------------------------
                                                                                   

consensus_14009#0      GTGAACACCACTGTTTTGTAGCAGATGTACTTCGACCCCCTAAAGCTTCATGCATGCCAG 1019
consensus_14009#1      ------------------------------------------------------------
                                                                                   

consensus_14009#0      TTTTCACTTTGCTGGTGTAAGGCATTAGCAACAACACAATTTTCCTTTTCCTTTTTGAAA 1079
consensus_14009#1      ------------------------------------------------------------
                                                                                   

consensus_14009#0      ATGATCTATTTGCTTCTGCTAGTGATTTCAGTGAACCATGTTGCGTCAGATCCAATACAT 1139
consensus_14009#1      ------------------------------------------------------------
                                                                                   

consensus_14009#0      CAAAGTAGGAAGTGAATTGGTCATCATTTTGGTCATCATGGTGTGCGCTCAGGACTCCAG 1199
consensus_14009#1      ------------------------------------------------------------
                                                                                   

consensus_14009#0      ATTTCTAATAAAGACAGTTCT 1220
consensus_14009#1      ---------------------
                                            




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)