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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14013#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 2117 fasta sequence
[TCTTTCTTTCTTCGAGCCACTTGTGTTTTGGCTTAGACGCCACTCTTTCCTCCGTGCCAGCTCTGCGTTAATCATCTTCCTCCTCGCTGTACCAATCTCTTGCTGCGTTTGGGGGGAGCAAAGCGAGCGAGAGGCCGTGATGGCGGCGGCGGCGGCGGCGGTGCTGCACGCGCTGGTGGCGCTCAGCCTCGCCGGCGCGGTCGCGGCGGCAGGAAGAGGCGGGGAGCAGCCGCTGTCGAGGATCGGCATCCACCGGACCACCTTCGCGATCCAGCCGGGTGCCTCCGTCGACGCCTCGCCGCTCCTCCTCGGCCTCGAGGGACAGGACAGAGAATGGGTGACTCTTACCTATAACAACCCCAAGCCATCGAAGGATGATTGGATT-GGGGTGTTCTCTCCTGCTAATTTCAGTGATTCTACTTGTCCATCAGAGAGCCAATGGGTTGAACCACCACTTCTATGTACAGCTCCCATAAAGTTTATATTTGCAAACTACAAGAATCTTGAC-TATGAGAAGACAGG-AAAGGGATCCATGAAGCTTCAGCTAATCAATCAGAGGGAGGATTTTTCATTTGCATTGTTTTCTGGAGGCCTCTCAAATCCAAAGCTCATTGCACACTCAAAGAGAGTAACCTTCACGAACCCAAAGGCCCCTGTGTACCCACGCCTAGCGCAAGGAAAATCCTGGAATGAAATGACAGTGACTTGGACAAGTGGATATGGCACCAATGAGGCTACACCATTTGTCAAATGGGGCCTACAAGGGCAAATCCAAAGCCTTTCTCCTGCAGGCACCCTTACGTTCAGTCGCAGCACTATGTGCGGTCCTCCTGCTAGGACAGTTGGATGGCGCGATCCTGGTTTCATACATACAAGTTTCCTCAAGGATCTGTGGCCTAATTTCAAGTATACATACAGAATTGGGCATCGGCTATCAGATGGCTCTATTATTTGGGGACATGAGTATAGCTTCCAAGCACCTCCTTATCCAGGGGAAGACTCTTTGCAGCGTGTAGTCATTTTTGGAGATATGGGGAAGGCTGAGGCCGATGGTTCAAATGAGTTCAATGACTTCGAGCCTGGTTCACTGAACACGACCTACCAGCTAATTAAAGATTTGAAGAATATTGATATGGTAATACATATTGGGGACATCTGCTATGCCAATGGTTATCTGTCACAATGGGATCAATTTACCGCACAAGTTGAACCCATTGCATCCAGTGTGCCTTACATGGTTGGAAGCGGCAACCATGAAAGAGATTGGCCTGGATCAGGTTCCTTCTATGGGAATTTGGATTCAGGTGGTGAATGCGGTGTACCAGCTCAGAATATGTTCTACGTGCCAGCAGAGAACCGTGAGCAATTCTGGTACTCGATAGACTACGGCATGTTCCGTTTCTGCATAGCCAACACCGAGCTCG-ACTGGAGG-CCAGGCACCGAGCAGTACAAG-TTCATCGAGCACTG-C-TTCTCCTCCG-TCGA-CCGG-CAG-AAACAG-CCGTGGCTCA-TCTTCC-TCG-CCCACCGTGTTCTCGGCTACTCA-TCAGCT-AGC-TTCTACGTCGAGGAGGGCACAA-CCGAGGAGCCCATGGGCAGGGAGAGCCTCCAGCCGCTCTGGCAGAAGTACAAGGTCGACATCGCCATGTACGGCCATGT-CCATGGC-TACGAGAGAACCTGCCCAGTCTACGAGAATGTGTGC-GTGGCGAAGGCGGCGAGCCA-CTACAGCGGCGC-GTTCAC-GGCGAC-GACGCACGTGGTGGTGGGCGGCGGCGGGGCGAGCCTGGCGGACTAC-GCCGGCGT-AC-GGGCGC--GGTGGAGCCACGTCCAGGACCGGGACTACGGGTTCGCCAAGCTGAC-GGCCTTCAACCACACGGCGCTGCTGTTCGAGTACGTCCGGAGCCGCGACGGCAGCGTGCACGACAGCTTCACCGTCTCCCGCGACTACCGCGACAT-CCTCGCCTGCGGC-GTCGACAACTGCCCCACCACCACCCTGGCCTCGTGAGGATCTCGCCGAAGCTCAGGTTGCTTACTGCTGCTGTGCCGTAAGCCAATTTGTACATTGTGACATTGAGAATTTGGGATGCTTGGCTTATCAATCCAATTTGATCTGAGACTGAAAAAAAAAAAAAAAA]
[+] EMBL AK101976 [TCTTTCTTTCTTCGAGCCACTTGTGTTTTGGCTTAGACGCCACTCTTTCCTCCGTGCCAGCTCTGCGTTAATCATCTTCCTCCTCGCTGTACCAATCTCTTGCTGCGTTTGGGGGGAGCAAAGCGAGCGAGAGGCCGTGATGGCGGCGGCGGCGGCGGCGGTGCTGCACGCGCTGGTGGCGCTCAGCCTCGCCGGCGCGGTCGCGGCGGCAGGAAGAGGCGGGGAGCAGCCGCTGTCGAGGATCGGCATCCACCGGACCACCTTCGCGATCCAGCCGGGTGCCTCCGTCGACGCCTCGCCGCTCCTCCTCGGCCTCGAGGGACAGGACAGAGAATGGGTGACTCTTACCTATAACAACCCCAAGCCATCGAAGGATGATTGGATT GGGGTGTTCTCTCCTGCTAATTTCAGTGATTCTACTTGTCCATCAGAGAGCCAATGGGTTGAACCACCACTTCTATGTACAGCTCCCATAAAGTTTATATTTGCAAACTACAAGAATCTTGAC TATGAGAAGACAGG AAAGGGATCCATGAAGCTTCAGCTAATCAATCAGAGGGAGGATTTTTCATTTGCATTGTTTTCTGGAGGCCTCTCAAATCCAAAGCTCATTGCACACTCAAAGAGAGTAACCTTCACGAACCCAAAGGCCCCTGTGTACCCACGCCTAGCGCAAGGAAAATCCTGGAATGAAATGACAGTGACTTGGACAAGTGGATATGGCACCAATGAGGCTACACCATTTGTCAAATGGGGCCTACAAGGGCAAATCCAAAGCCTTTCTCCTGCAGGCACCCTTACGTTCAGTCGCAGCACTATGTGCGGTCCTCCTGCTAGGACAGTTGGATGGCGCGATCCTGGTTTCATACATACAAGTTTCCTCAAGGATCTGTGGCCTAATTTCAAGTATACATACAGAATTGGGCATCGGCTATCAGATGGCTCTATTATTTGGGGACATGAGTATAGCTTCCAAGCACCTCCTTATCCAGGGGAAGACTCTTTGCAGCGTGTAGTCATTTTTGGAGATATGGGGAAGGCTGAGGCCGATGGTTCAAATGAGTTCAATGACTTCGAGCCTGGTTCACTGAACACGACCTACCAGCTAATTAAAGATTTGAAGAATATTGATATGGTAATACATATTGGGGACATCTGCTATGCCAATGGTTATCTGTCACAATGGGATCAATTTACCGCACAAGTTGAACCCATTGCATCCAGTGTGCCTTACATGGTTGGAAGCGGCAACCATGAAAGAGATTGGCCTGGATCAGGTTCCTTCTATGGGAATTTGGATTCAGGTGGTGAATGCGGTGTACCAGCTCAGAATATGTTCTACGTGCCAGCAGAGAACCGTGAGCAATTCTGGTACTCGATAGACTACGGCATGTTCCGTTTCTGCATAGCCAACACCGAGCTCG ACTGGAGG CCAGGCACCGAGCAGTACAAG TTCATCGAGCACTG C TTCTCCTCCG TCGA CCGG CAG AAACAG CCGTGGCTCA TCTTCC TCG CCCACCGTGTTCTCGGCTACTCA TCAGCT AGC TTCTACGTCGAGGAGGGCACAA CCGAGGAGCCCATGGGCAGGGAGAGCCTCCAGCCGCTCTGGCAGAAGTACAAGGTCGACATCGCCATGTACGGCCATGT CCATGGC TACGAGAGAACCTGCCCAGTCTACGAGAATGTGTGC GTGGCGAAGGCGGCGAGCCA CTACAGCGGCGC GTTCAC GGCGAC GACGCACGTGGTGGTGGGCGGCGGCGGGGCGAGCCTGGCGGACTAC GCCGGCGT AC GGGCGC GGTGGAGCCACGTCCAGGACCGGGACTACGGGTTCGCCAAGCTGAC GGCCTTCAACCACACGGCGCTGCTGTTCGAGTACGTCCGGAGCCGCGACGGCAGCGTGCACGACAGCTTCACCGTCTCCCGCGACTACCGCGACAT CCTCGCCTGCGGC GTCGACAACTGCCCCACCACCACCCTGGCCTCGTGAGGATCTCGCCGAGGCTCAGGTTGCTTACTGCTGCTGTGCCGTAAGCCAATTTGTACATTGTGACATTGAGAATTTGGGATGCTTGGC ]
[+] EMBL CA757754 [ TTCTTCGAGCCACTTGTGTTTTGGCTTAGACGCCACTCTTTCCTCCGTGCCAGCTCTGCGTTAATCATCTTCCTCCTCGCTGTACCAATCTCTTGCTTCGTTTGGGGGGAGCAAAGCGAGCGAGAGGCCGTGAT GGCGGCGGCGGCGGCGGTGCTGCACGCGCTGGTGGCGCTCAGCCTCGCCGGCGCGGTCGCGGCGGCAGGAAGAGGCGGGGAGCAGCCGCTGTCGAGGATCGG ]
[+] EMBL AU162276 [ CGTTTGGGGGGAGCAAAGCNNGCGAGAGGCCGTGATGGCGGCGGCGGCGGCGGCGGTGCTGCACGCGCTGGTGGCGCTCAGCCTCGCCGGCGCGGTCGCGGCGGCAGGAAGAGGCGGGGAGCAGCCGCTGTCGAGGATCGGCATCCACCGGACCACCTTCGCGATCCAGCCGGGTGCCTCCGTCGACGCCTCGCCGCTCCTCCTCGGCCTCGAGGGACAGGACAGAGAATGGGTGACTCTTACCTATAACAACCCCAAGCCATCGAAGGATGATTGGATTGGGGGTGTTCTCTCCTGCTAATTTCAGTGATTCTACTTGTCCATCAGAGAGCCAATGGGTTGAACCACCACTTCTATGTACAGCTCCCATAAAGTTTATATTTNCNAACTACAAGAATCTTGACTTTTNAGAAGACAGGNAAAGGG TTCATGAAGCTTCAGNTAAT ]
[+] EMBL CB651497 [ acAGTATGGGTGACTCTTACCTATAACAACCCCAAGCCATCGAAGGATGATTGGATT GGGGTGTTCTCTCCTGCTAATTTCAGTGATTCTACTTGTCCATCAGAGAGCCAATGGGTTGAACCACCACTTCTATGTACAGCTCCCATAAAGTTTATATTTGCAAACTACAAGAATCTTGAC TATGAGAAGACAGG AAAGGGATCCATGAAGCTTCAGCTAATCAATCAGAGGGAGGATTTTTCATTTGCATTGTTTTCTGGAGGCCTCTCAAATCCAAAGCTCATTGCACACTCAAAGAGAGTAACCTTCACGAACCCAAAGGCCCCTGTGTACCCACGCCTAGCGCAAGGAAAATCCTGGAATGAAATGACAGTGACTTGGACAAGTGGATATGGCACCAATGAGGCTACACCATTTGTCAAATGGGGCCTACAAGGGCAAATCCAAAGCCTTTCTCCTGCAGGCACCCTTACGTTCAGTCGCAGCACTATGTGCGGTCCTCCTGCTAGGACAGTTGGATGGCGCGATCCTGGTTTCATACATACAAGTTTCCTCAAGGATCTGTGGCCTAATTTCAAGTATACATACAGAATTGGGCATCGGCTATCAGATGGCTCTATTATTTGGGGACATGAGTATAGCTTCCAAGCACCTCCTTATCCAGGGGAAGACTCTTTGCAGCGTGTAGTCATTTTTGGAGATATGGGGAAGGCTGAGGCCGATGGTTCAAATGAGTTCAATGACTTCGAGCCTGGTTCACTGAACACGACCTACCAGCTAATTAAAGATTTGAAGAATATTGATATGGTAATACATATTGGGGACATCTG ]
[+] EMBL AK063756 [ TACAAGAATCTTGAC TATGAGAAGACAGG AAAGGGATCCATGAAGCTTCAGCTAATCAATCAGAGGGAGGATTTTTCATTTGCATTGTTTTCTGGAGGCCTCTCAAATCCAAAGCTCATTGCACACTCAAAGAGAGTAACCTTCACGAACCCAAAGGCCCCTGTGTACCCACGCCTAGCGCAAGGAAAATCCTGGAATGAAATGACAGTGACTTGGACAAGTGGATATGGCACCAATGAGGCTACACCATTTGTCAAATGGGGCCTACAAGGGCAAATCCAAAGCCTTTCTCCTGCAGGCACCCTTACGTTCAGTCGCAGCACTATGTGCGGTCCTCCTGCTAGGACAGTTGGATGGCGCGATCCTGGTTTCATACATACAAGTTTCCTCAAGGATCTGTGGCCTAATTTCAAGTATACATACAGAATTGGGCATCGGCTATCAGATGGCTCTATTATTTGGGGACATGAGTATAGCTTCCAAGCACCTCCTTATCCAGGGGAAGACTCTTTGCAGCGTGTAGTCATTTTTGGAGATATGGGGAAGGCTGAGGCCGATGGTTCAAATGAGTTCAATGACTTCGAGCCTGGTTCACTGAACACGACCTACCAGCTAATTAAAGATTTGAAGAATATTGATATGGTAATACATATTGGGGACATCTGCTATGCCAATGGTTATCTGTCACAATGGGATCAATTTACCGCACAAGTTGAACCCATTGCATCCAGTGTGCCTTACATGGTTGGAAGCGGCAACCATGAAAGAGATTGGCCTGGATCAGGTTCCTTCTATGGGAATTTGGATTCAGGTGGTGAATGCGGTGTACCAGCTCAGAATATGTTCTACGTGCCAGCAGAGAACCGTGAGCAATTCTGGTACTCGATAGACTACGGCATGTTCCGTTTCTGCATAGCCAACACCGAGCTCG ACTGGAGG CCAGGCACCGAGCAGTACAAG TTCATCGAGCACTG C TTCTCCTCCG TCGA CCGG CAG AAACAG CCGTGGCTCA TCTTCC TCG CCCACCGTGTTCTCGGCTACTCA TCAGCT AGC TTCTACGTCGAGGAGGGCACAA CCGAGGAGCCCATGGGCAGGGAGAGCCTCCAGCCGCTCTGGCAGAAGTACAAGGTCGACATCGCCATGTACGGCCATGT CCATGGC TACGAGAGAACCTGCCCAGTCTACGAGAATGTGTGC GTGGCGAAGGCGGCGAGCCA CTACAGCGGCGC GTTCAC GGCGAC GACGCACGTGGTGGTGGGCGGCGGCGGGGCGAGCCTGGCGGACTAC GCCGGCGT AC GGGCGC GGTGGAGCCACGTCCAGGACCGGGACTACGGGTTCGCCAAGCTGAC GGCCTTCAACCACACGGCGCTGCTGTTCGAGTACGTCCGGAGCCGCGACGGCAGCGTGCACGACAGCTTCACCGTCTCCCGCGACTACCGCGACAT CCTCGCCTGCGGC GTCGACAACTGCCCCACCACCACCCTGGCCTCGTGAGGATCTCGCCGAAGCTCAGGTTGCTTACTGCTGCTGTGCCGTAAGCCAATTTGTACATTGTGACATTGAGAATTTGGGATGCTTGGCTTATCAATCCAATTTGA ]
[+] EMBL C74004 [ ATGAAAGAGATTGGCCTGGATCAGGTTCCTTCTATGGGAATTTGGATTCAGGTGGTGAATGCGGTGTACCAGCTCAGAATATGTTCTACGTGCCAGCAGAGAACCGTGAGCAATTCTGGTACTCGATAGACTACGGCATGTTCCGNTTCTGCATAGCCAACACCGAGCTCG ACTGGAGG CCAGGNACCGAGCAGTACAAG TTCATCGNGC ]
[-] EMBL CB651496 [ TTCTAT GGAATTGGGATTCAGGTGGTGAATGCGGTGTACCAGCTCAGAATATGTTCTACGTGCCAGCAGAGAACCGTGAGCAATTCTGGTACTCGATAGACTACGGCATGTTCCGTTTCTGCATAGCCAACACCGAGCTCG ACTGGAGG CCAGGCACCGAGCAGTACAAG TTCATCGAGCACTG C TTCTCCTCCG TCGA CCGG CAG AAACAG CCGTGGCTCA TCTTCC TCG CCCACCGTGTTCTCGGCTACTCA TCAGCT AGC TTCTACGTCGAGGAGGGCACAA CCGAGGAGCCCATGGGCAGGGAGAGCCTCCAGCCGCTCTGGCAGAAGTACAAGGTCGACATCGCCATGTACGGCCATGT CCATGGC TACGAGAGAACCTGCCCAGTCTACGAGAATGTGTGC GTGGCGAAGGCGGCGAGCCA CTACAGCGGCGC GTTCAC GGCGAC GACGCACGTGGTGGTGGGCGGCGGCGGGGCGAGCCTGGCGGACTAC GCCGGCGT AC GGGCGC GGTGGAGCCACGTCCAGGACCGGGACTACGGGTTCGCCAAGCTGAC GGCCTTCAACCACACGGCGCTGCTGTTCGAGTACGTCCGGAGCCGCGACGGCAGCGTGCACGACAGCTTCACCGTCTCCCGCGACTACCGCGACAT CCTCGCCTGCGGC GTCGACAACTGCCCCACCACCACCCTGGCCTCGTGAGGATCTCGCCGAAGCTCAGGTTGCTTACTGCTGCTGTGCCGTAAGCCAATTTGTACATTGTGACATTGAGAATTTGGGATGCTTGGCTTATCAATCCAATTTG ]
[+] EMBL AU029610 [ actTCGAANTGGAGGCCCAGGCACCGACCATTACAAGTTTCATCGAACCATG CTTTCTCCTCCG TCGACCCGG CAG AAACAN CCTTGGCTCA TCTTCCNTCG CCCACCGTTTTCTCGGNTACTCA TCAGCT AGCTTTNTACGTCGAGGAGGGCACAA CCGAGGAGCCCATGGNCAGGGAGAGCTTCCAGCCGCTNTGGCAGAATTACAAGGTCGACATCGCCATNTACGGCCATGTCCCATGGC TACGAGAGAACCTGCCCAGTCTACGAGAATGTGTNC GTGGCGAAGGCGGCGAGCCA CTACAGCGGCGC GTTCAC GGCGAC GACGCACGTGGTGGTGGGCGGCGGCGGGGCGAGCCTGGCGGACTAC GCCGGCGTAAC GGGCGC GGTGGAGCCACGTCCAGGACCGGGA TACGGGTTCGCCAAGCTGAC GGCCTTCAACCACACGGCGCTGCTGTTCGAGTACGTCCGGAGCCGCGACGGCAGCGTGCACGACAGCTTCACCGTCTCCCGCGACTACCGCGACATNCCT CTGCGGC GTCGACAACTGCCCCACCACCACCCTGGCCTCGTGAGGATCTCGCCGAAGCTCAGGTTGCTTACTGCTGCTGTGCCGTAAGCCAATTTGTACATTGTGACATTGAGAATTTGGGATGCTTGGCTTATCAATCCAATTTGATCTGAGNCTGAAAAAAAAAAAAAAAA]
[+] EMBL AU029309 [ caATCGAGCACTGCC TTATCTTCCGTTCNA CCGGCCAGAAAACAGCCCGTGGCTNATTTTTCC TCGCCCCACCGTGTTCTCGGCTACTCATTCAGCTAAGCTTTCTACGTCGA GAGGNCACAACCCGAGGAGCCCATGGCAAGGGAGAGCCTCAAGCCGCTTTGGCAGAAGTACAAGGTCGA ATCGCCATGTACGG CATGT CCATGGCTTACGAGAGAACCTGCCCAGTCTACGAGAATGTGTGC GTGGCGAAGGCGGCGAGCCA CTACAGCGGCGC GTTCAC GGCGAC GACGCACGTGGTGGTGGGCGGCGGCGGGGCGAGCCTGGCGGACTAC GCCGGCGT AC GGGCGC GGTGGAGCCACGTCCAGGACCGGGACTACGGGTTCGCCAAGCTGAC GGCCTTCAACCACACGGCGCTGCTGTTCGAGTACGTCCGGAGCCGCGACGGCAGCGTGCACGACAGCTTCACCGTCTCCCGCGACTACCGCGACATACCT NTGCGGC GTCGACAACTGCCCCACCACCACCCTGGCCTCGTGAGGATCTCGCCGAAGCTCAGGTTGCTTACTGCTGCTGTGCCGTAAGCCAATTTGTACATTGTGACATTGAGAATTTGGGATGCTTGGCTTATCAATCCAATTTGATCTGAGACTGAAA ]
[+] EMBL BI796808 [ aCCTCCACCCGCT TGGCAGAAGTACAAGGTCGACATCCCCATGTAC GCCATGT CCATGGC TACGAGAGAACCTGCCCAGTCTACGAGAATGTGTGC TGGCGAAGGCGGCGAGCCA CTACAGCGGCGC GTTCAC GGCGAC GACGCACGTGGTGGT GGCGGCGGCGGGGCGAGCCTGGCGGACTAC GCCGGCTT AC GGGC C GGTGGAGCCACGTCCAGGACCGGGACTACGGGTTCGCCAAGCTGAC GGCCTTCAACCACACGGCGCTGCTGTTCGAGTACGTCCGGAGCCGCGACGGCAGCGTGCACGACAGCTTCACCGTCTCCCGCGACTACCGCGACAT CCTCGCCTGCGGC GTCGACAACTGCCCCACCACCACCCTGGCCTCGTGAGGATCTCGCCGAAGCTCAGGTTGCTTACTGCTGCTGTGCCGTAAGCCAATTTGTACATCGTGACATTGAGAATTTGGGATGCTTGGCTTATCAATCC ATTTGATCTGAGACTGAAAAAAA ]
[+] EMBL BI796965 [ cGCCATGT CCATGGC TACGAGAGAACCTGCCCAGTCTACGAGAATGTGTGC GTGGCGAAGGCGGCGAGCCA CTACAGCGGCGC GTTCAC GGCGACAGACGCACGTGGTGGTGGGCGGCGGCGGGGCGAGCCTGGCGGACTAC GCCGGCTT AC GGGCGC GGTGGAGCCACGTCCAGGACCGGGACTACGGGTTCGCCAAGCTGACAGGCCTTCAACCACACGGCGCTGCTGTTCGAGTACGTCCGGAGCCGCGACGGCAGCGTGCACGACAGCTTCACCGTCTCCCGCGACTACCGCGACAT CCTCGCCTGCGGC GTCGACAACTGCCCCACCACCACCCTGGCCTCGTGAGGATCTCGCCGAAGCTCAGGTTGCTTACTGCTGCTGTGCCGTAAGCCAATTTGTACATCGTGACATTGAGAATTTGGGATGCTTGGCTTATCAATCCAATTTGATCTGAGACTGAAAAAA ]
[+] EMBL BI810445 [ acgccCCATGT CCAT GC TACGAGAGAACCTGCACAGTCTACGAGAATGTGTGCTGT GCGAA GCGTCGAGCCACCTACAGCGGCGCAGTTCACTGGCGACAGACGCACGT GT GT GGCCGCGGCGGGGCGAGCCT GCGGACTACAGCCGGCGT ACAGGGCACCAGGTGGAGCCACGTCCAGGACCGGGACTACGGGTTCGCCAAGCTGAC GGCCTTCAACCACACGGCGCTGCTGTTCGAGTACGTCCGGAGCCGCGACGGCAGCGTGCACGACAGCTTCACCGTCTCCCGCGACTACCGCGACAT CCTCGCCTGCGGCAGTCGACAACTGCCCCACCACCACCCTGGCCTCGTGAGGATCTCGCCGAAGCTCAGGTTGCTTACTGCTGCTGTGCCGTAAGCCAATTTGTACATTGTGACATTGAGAATTTGGGATGCTTGGCTTATCAATCCAATTTGATCTGAGACTGAAAAAAAA ]
[+] EMBL BI796131 [ ACCTGCCCAGTCTACGAGAATGTGTGC GTGGCGAA GCGGCGAGCCA CTACA CGGCGC GTTCAC GGCGAC GACGCACGTGGT GT GGC GC GCGGGGCGAGCCT GCGGACTAC GCCGGCTT AC GGGC C GGTGGAGCCACGTCCAGGACCGGGACTACGGGTTCGCCAAGCTGAC GGCCTTCAACCACACGGCGCTGCTGTTCGAGTACGTCCGGAGCCGCGACGGCAGCGTGCACGACAGCTTCACCGTCTCCCGCGACTACCGCGACAT CCTCGCCTGCGGC GTCGACAACTGCCCCACCACCACCCTGGCCTCGTGAGGATCTCGCCGAAGCTCAGGTTGCTTACTGCTGCTGTGCCGTAAGCC ATTTGTACATCGTGACATTGAGAATTTGGGATGCTTGGCTTATCAATCCCATTTGATCTGAGACTGAAAAA ]
consensusID : consensus_14013#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 575 fasta sequence
[CCCNCGTTTTGGNAATTNTTANCNGTTTAAGTTGGGGGGCAAACCGGGGCCCAGGGCAGGNGNCCTCCACCGTTTNGGCAGAAAANAAGTTGAATTNCCAGTACGGCNANTCCATGGTAAGGAGAGACCTGCCANTTTACGAGAATTTTGCGTGGGAAGGCGGGANCAATAACAGGGGNGGTTTCACGGNGAAGACGCANGTTGTTGTTGGGCGGCGGCGGGGCGAGCTGGCGGATAACGCCGGCGTACGGGCGCGGTGGAGCCAGTCCAGGACCGGGACTACGGGTTCGCCAAGCTGACGGCCTTCAACCACACGGCGCTGCTGTTCGAGTACGTCCGGAGCCGCGACGGCAGCGTGCACGACAGCTTCACCGTNTCCCGCGACTACCGCGACATCCTCGCCTGCGGCGTCGACAACTGCCCCACCACCACCCTGGCCTCGTGAGGATNTCGCCGAAGCTCAGGTTGCTTACTGCTGCTGTGCCGTAAGCCAATTTGTACATTGTGACATTGAGAATTTGGGATGCTTGGCTTATCAATCCAATTTGATCTGAGACTGAAAAAAAAAAAAAAAA]
[-] EMBL AA753321 [CCCNCGTTTTGGNAATTNTTANCNGTTTAAGTTGGGGGGCAAACCGGGGCCCAGGGCAGGNGNCCTCCACCGTTTNGGCAGAAAANAAGTTGAATTNCCAGTACGGCNANTCCATGGTAAGGAGAGACCTGCCANTTTACGAGAATTTTGCGTGGGAAGGCGGGANCAATAACAGGGGNGGTTTCACGGNGAAGACGCANGTTGTTGTTGGGCGGCGGCGGGGCGAGCTGGCGGATAACGCCGGCGTACGGGCGCGGTGGAGCCAGTCCAGGACCGGGACTACGGGTTCGCCAAGCTGACGGCCTTCAACCACACGGCGCTGCTGTTCGAGTACGTCCGGAGCCGCGACGGCAGCGTGCACGACAGCTTCACCGTNTCCCGCGACTACCGCGACATCCTCGCCTGCGGCGTCGACAACTGCCCCACCACCACCCTGGCCTCGTGAGGATNTCGCCGAAGCTCAGGTTGCTTACTGCTGCTGTGCCGTAAGCCAATTTGTACATTGTGACATTGAGAATTTGGGATGCTTGGCTTATCAATCCAATTTGATCTGAGACTGAAAAAAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_14013#0 TCTTTCTTTCTTCGAGCCACTTGTGTTTTGGCTTAGACGCCACTCTTTCCTCCGTGCCAG 60
consensus_14013#1 ------------------------------------------------------------
consensus_14013#0 CTCTGCGTTAATCATCTTCCTCCTCGCTGTACCAATCTCTTGCTGCGTTTGGGGGGAGCA 120
consensus_14013#1 ------------------------------------------------------------
consensus_14013#0 AAGCGAGCGAGAGGCCGTGATGGCGGCGGCGGCGGCGGCGGTGCTGCACGCGCTGGTGGC 180
consensus_14013#1 ------------------------------------------------------------
consensus_14013#0 GCTCAGCCTCGCCGGCGCGGTCGCGGCGGCAGGAAGAGGCGGGGAGCAGCCGCTGTCGAG 240
consensus_14013#1 ------------------------------------------------------------
consensus_14013#0 GATCGGCATCCACCGGACCACCTTCGCGATCCAGCCGGGTGCCTCCGTCGACGCCTCGCC 300
consensus_14013#1 ------------------------------------------------------------
consensus_14013#0 GCTCCTCCTCGGCCTCGAGGGACAGGACAGAGAATGGGTGACTCTTACCTATAACAACCC 360
consensus_14013#1 ------------------------------------------------------------
consensus_14013#0 CAAGCCATCGAAGGATGATTGGATTGGGGTGTTCTCTCCTGCTAATTTCAGTGATTCTAC 420
consensus_14013#1 ------------------------------------------------------------
consensus_14013#0 TTGTCCATCAGAGAGCCAATGGGTTGAACCACCACTTCTATGTACAGCTCCCATAAAGTT 480
consensus_14013#1 ------------------------------------------------------------
consensus_14013#0 TATATTTGCAAACTACAAGAATCTTGACTATGAGAAGACAGGAAAGGGATCCATGAAGCT 540
consensus_14013#1 ------------------------------------------------------------
consensus_14013#0 TCAGCTAATCAATCAGAGGGAGGATTTTTCATTTGCATTGTTTTCTGGAGGCCTCTCAAA 600
consensus_14013#1 ------------------------------------------------------------
consensus_14013#0 TCCAAAGCTCATTGCACACTCAAAGAGAGTAACCTTCACGAACCCAAAGGCCCCTGTGTA 660
consensus_14013#1 ------------------------------------------------------------
consensus_14013#0 CCCACGCCTAGCGCAAGGAAAATCCTGGAATGAAATGACAGTGACTTGGACAAGTGGATA 720
consensus_14013#1 ------------------------------------------------------------
consensus_14013#0 TGGCACCAATGAGGCTACACCATTTGTCAAATGGGGCCTACAAGGGCAAATCCAAAGCCT 780
consensus_14013#1 ------------------------------------------------------------
consensus_14013#0 TTCTCCTGCAGGCACCCTTACGTTCAGTCGCAGCACTATGTGCGGTCCTCCTGCTAGGAC 840
consensus_14013#1 ------------------------------------------------------------
consensus_14013#0 AGTTGGATGGCGCGATCCTGGTTTCATACATACAAGTTTCCTCAAGGATCTGTGGCCTAA 900
consensus_14013#1 ------------------------------------------------------------
consensus_14013#0 TTTCAAGTATACATACAGAATTGGGCATCGGCTATCAGATGGCTCTATTATTTGGGGACA 960
consensus_14013#1 ------------------------------------------------------------
consensus_14013#0 TGAGTATAGCTTCCAAGCACCTCCTTATCCAGGGGAAGACTCTTTGCAGCGTGTAGTCAT 1020
consensus_14013#1 ------------------------------------------------------------
consensus_14013#0 TTTTGGAGATATGGGGAAGGCTGAGGCCGATGGTTCAAATGAGTTCAATGACTTCGAGCC 1080
consensus_14013#1 ------------------------------------------------------------
consensus_14013#0 TGGTTCACTGAACACGACCTACCAGCTAATTAAAGATTTGAAGAATATTGATATGGTAAT 1140
consensus_14013#1 ------------------------------------------------------------
consensus_14013#0 ACATATTGGGGACATCTGCTATGCCAATGGTTATCTGTCACAATGGGATCAATTTACCGC 1200
consensus_14013#1 ------------------------------------------------------------
consensus_14013#0 ACAAGTTGAACCCATTGCATCCAGTGTGCCTTACATGGTTGGAAGCGGCAACCATGAAAG 1260
consensus_14013#1 ------------------------------------------------------------
consensus_14013#0 AGATTGGCCTGGATCAGGTTCCTTCTATGGGAATTTGGATTCAGGTGGTGAATGCGGTGT 1320
consensus_14013#1 ------------------------------------------------------------
consensus_14013#0 ACCAGCTCAGAATATGTTCTACGTGCCAGCAGAGAACCGTGAGCAATTCTGGTACTCGAT 1380
consensus_14013#1 ------------------------------------------------------------
consensus_14013#0 AGACTACGGCATGTTCCGTTTCTGCATAGCCAACACCGAGCTCGACTGGAGGCCAGGCAC 1440
consensus_14013#1 ------------------------------------------------------------
consensus_14013#0 CGAGCAGTACAAGTTCATCGAGCACTGCTTCTCCTCCGTCGACCGGCAGAAACAGCCGTG 1500
consensus_14013#1 ------------------------------------------------------------
consensus_14013#0 GCTCATCTTCCTCGCCCACCGTGTTCTCGGCTACTCATCAGCTAGCTTCTACGTCGAGGA 1560
consensus_14013#1 -----------------CCCNCGTTTTGGN--AATTNTTANCNG---TTTAAGTT--GGG 36
** *** * * * * * * * * ** ** **
consensus_14013#0 GGGCACAACCGAGGAGCCCATGGGCAGGGAGAGCCTCCAGCCGCTCTGGCAGAAGTACAA 1620
consensus_14013#1 GGGCA-AACCGGGG--CCCA-GGGCAGGNGN--CCTCCA-CCGTTTNGGCAGAA--AANA 87
***** ***** ** **** ******* ****** *** * ******* * *
consensus_14013#0 GGTCGACATCGCCATGTACGGCCATGTCCATGGCTACGAGAGAACCTGCCCAGTCTACGA 1680
consensus_14013#1 AGTTGA-ATTNCCA-GTACGGCNAN-TCCATGGTAAGGAGAGA-CCTGCC-ANTTTACGA 142
** ** ** *** ******* * ******* * ****** ****** * * *****
consensus_14013#0 GAATGTGTGCGTGGCGAAGGCGGCGAGCCACTACAGCGGCGCGTTCACGGCGACGACGCA 1740
consensus_14013#1 GAATTT-TGCGTGG-GAAGGCGG-GANCAATAACAGGGGNGGTTTCACGGNGAAGACGCA 199
**** * ******* ******** ** * * **** ** * ******* ** ******
consensus_14013#0 CGTGGTGGT-GGGCGGCGGCGGGGCGAGCCTGGCGGACTACGCCGGCGTACGGGCGCGGT 1799
consensus_14013#1 NGTTGTTGTTGGGCGGCGGCGGGGCGAGC-TGGCGGATAACGCCGGCGTACGGGCGCGGT 258
** ** ** ******************* ******* *********************
consensus_14013#0 GGAGCCACGTCCAGGACCGGGACTACGGGTTCGCCAAGCTGACGGCCTTCAACCACACGG 1859
consensus_14013#1 GGAGCCA-GTCCAGGACCGGGACTACGGGTTCGCCAAGCTGACGGCCTTCAACCACACGG 317
******* ****************************************************
consensus_14013#0 CGCTGCTGTTCGAGTACGTCCGGAGCCGCGACGGCAGCGTGCACGACAGCTTCACCGTCT 1919
consensus_14013#1 CGCTGCTGTTCGAGTACGTCCGGAGCCGCGACGGCAGCGTGCACGACAGCTTCACCGTNT 377
********************************************************** *
consensus_14013#0 CCCGCGACTACCGCGACATCCTCGCCTGCGGCGTCGACAACTGCCCCACCACCACCCTGG 1979
consensus_14013#1 CCCGCGACTACCGCGACATCCTCGCCTGCGGCGTCGACAACTGCCCCACCACCACCCTGG 437
************************************************************
consensus_14013#0 CCTCGTGAGGATCTCGCCGAAGCTCAGGTTGCTTACTGCTGCTGTGCCGTAAGCCAATTT 2039
consensus_14013#1 CCTCGTGAGGATNTCGCCGAAGCTCAGGTTGCTTACTGCTGCTGTGCCGTAAGCCAATTT 497
************ ***********************************************
consensus_14013#0 GTACATTGTGACATTGAGAATTTGGGATGCTTGGCTTATCAATCCAATTTGATCTGAGAC 2099
consensus_14013#1 GTACATTGTGACATTGAGAATTTGGGATGCTTGGCTTATCAATCCAATTTGATCTGAGAC 557
************************************************************
consensus_14013#0 TGAAAAAAAAAAAAAAAA 2117
consensus_14013#1 TGAAAAAAAAAAAAAAAA 575
******************
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||