These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14024#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 2002 fasta sequence [TTCAGCTACCGCGACCGGCTGCCGGGCGCCGTCGGCAACTTCATGCTGGACGTGAACGGGCAGATGCGGCGGCGGCAGTGGAGCGAGACGGCGGGGAAGTGGATCCTCTTCTGCTCGTTGCCCCACGACGCGTGCGACGTGTACGGCTCGTGCGGGCCCTTTGGAGTCTGCAGCAACGCCACCAACCCGGAGTGCCGGTGCCCCGCCGGCTTCGAGCCGCGGTCGTCGGAGGAGTGGAGGCTGGAGAACGCCGCCGGAGGCTGCGTGAGGCGGCACCCTCTCGAGTGTCACGGAGACGGGTTCCTGGCGCTGCCGTACACCGTGCGGCTCCCGAATGGCTCCGTGGAGGCGCCGGCCGGAGCTGGGAACGACAAGGCGTGCGCGCACACCTGCCTGGTCGACTGCTCCTGCACGGCCTACGTTCACGACGGAGCGAAGTGCCTCGTGTGGAACGGCGAGCTCGTCAACATGAAAGCCTACGCGGCTAATGAGAATGGCCAAGGCGATCCTGGCCTCGCCGGAGCGGTGCTTCACCTCCGTGTCGCCCACTCGGAGGTTCCGGCGTCGTCGACGGAGCACTCGTGGAAGAAATCGATGGTAATCCTTGGAAGCGTCGTTGCGGCGGTGGTGCTGCTCTTGGCGAGCCTCGTCACCGTGGTGGCGGTGGCGGCGGTGTTGCGGATGCGGCGTAGGAGGGGCAAGGTGACGGCGGTGCAGGGGTCGCTGCTGCTGCTCGACTACCATGCCGTGAAGACCGCGACGAGGGACTTCTCGGAGAAGCTCGGGAGCGGGAGCTTCGGCACGGTGTTCAAAGGCGCGCTGCCGGACGGGACGCCCGTGGCCGTCAAGAAGCTCGACGGTCTCCGGCAAGGCGAGAAGCAATTCAGAACGGAGGTGGTGACGCTCGGCATGATCCAGCACGTCAACCTCGTCCGACTCCGTGGCTTCTGCTGCGAGGGAAACAAGAGGGCGCTCGTGTACGACTACATGGCCAATGGCTCGCTGGACTCGCACCTGTTCGTCATGAGCGGCTCCAGCTCCGGCCCCGACTCCAAGCAGGTGACCCTGACTTGGAGCCAACGGTACAACGTCGCGGTTGGTGTGGCACGGGGCTTGGCTTACCTGCACGAGAAGTGCAGGGAGTGCATCATACACTGCGACGTCAAGCCGGAGAACATCCTCCTCGATCAGGAGATGGCGGCGAGGCTCGCGGACTTCGGCATGGCCAAGCTCGTCGGCCGCGACTTCAGCAGCGTCCTGACCACCATGCGGGGCACGGTGGGATACCTCGCGCCGGAGTGGCTAGCCGGCACGCC-GGTCA-CCGCAAAAGCCGACGTGTACAGCTTCGGGCTCCTGCTCTTCGAGCTCGTCTCGGGCCGGCGGAACAGCACCGCGCCGTCGTCGTCGTCGGAGGGCGGCCCTGGGATTTACTTCCCGGTTCATGCCGTGGTCAAGCTAAACGAAGGCGACGTGGCCGGGCTGGTCGACGAGAGGGTGGCCAAGGATGCCGACCCGAAGGAGGTTGAGAGACTCTGCAAGGTCGCGGGCTGGTGCATTCAAGACGAGGAAGGCGACCGGCCGACCATGGGGCTCGTCGTGCAGCAGCTCGAAGGCATCG-CCAACGTAATGTTGCCGCCGATCCC-TTCTCGGCTTCATATCCTGGCGATTGAGAACGAATGGGTCAGAGGTGTTCCAGAGGATGAGCGCTGCTCAAAGAGCGGTAGTAAACCAGAAACAGAAGCAATAGAAGAAATGTAGAACTGAAAAGAATCTGGGAGCACCCTACAGCTGAAGTGAAGATGCAGCGTCAGATATGAAAATGTAGTTGTAATGTCAGCATAGTTGATATTTCCCGTGTGGATGTATAGCCAGTACTGTACTGCAACTGTTCTGTAAATTCCTTAAATTCCGGAAACAGGATCAGACAAGTACCTTCTCTCGTTTTGTTCCCATCTAATTCTGGTCCATCCTTGCTGACAGCTGCACCTTTATTGAAGAAATC] [+] EMBL AK060765 [TTCAGCTACCGCGACCGGCTGCCGGGCGCCGTCGGCAACTTCATGCTGGACGTGAACGGGCAGATGCGGCGGCGGCAGTGGAGCGAGACGGCGGGGAAGTGGATCCTCTTCTGCTCGTTGCCCCACGACGCGTGCGACGTGTACGGCTCGTGCGGGCCCTTTGGAGTCTGCAGCAACGCCACCAACCCGGAGTGCCGGTGCCCCGCCGGTTTCGAGCCGCGGTCGTCGGAGGAGTGGAGGCTGGAGAACGCCGCCGGAGGCTGCGTGAGGCGGCACCCTCTCGAGTGTCACGGAGACGGGTTCCTGGCGCTGCCGTACACCGTGCGGCTCCCGAATGGCTCCGTGGAGGCGCCGGCCGGAGCTGGGAACGACAAGGCGTGCGCGCACACCTGCCTGGTCGACTGCTCCTGCACGGCCTACGTTCACGACGGAGCGAAGTGCCTCGTGTGGAACGGCGAGCTCGTCAACATGAAAGCCTACGCGGCTAATGAGAATGGCCAAGGCGATCCTGGCCTCGCCGGAGCGGTGCTTCACCTCCGTGTCGCCCACTCGGAGGTTCCGGCGTCGTCGACGGAGCACTCGTGGAAGAAATCGATGGTAATCCTTGGAAGCGTCGTTGCGGCGGTGGTGCTGCTCTTGGCGAGCCTCGTCACCGTGGTGGCGGTGGCGGCGGTGTTGCGGATGCGGCGTAGGAGGGGCAAGGTGACGGCGGTGCAGGGGTCGCTGCTGCTGCTCGACTACCATGCCGTGAAGACCGCGACGAGGGACTTCTCGGAGAAGCTCGGGAGCGGGAGCTTCGGCACGGTGTTCAAAGGCGCGCTGCCGGACGGGACGCCCGTGGCCGTCAAGAAGCTCGACGGTCTCCGGCAAGGCGAGAAGCAATTCAGAACGGAGGTGGTGACGCTCGGCATGATCCAGCACGTCAACCTCGTCCGACTCCGTGGCTTCTGCTGCGAGGGAAACAAGAGGGCGCTCGTGTACGACTACATGGCCAATGGCTCGCTGGACTCGCACCTGTTCGTCATGAGCGGCTCCAGCTCCGGCCCCGACTCCAAGCAGGTGACCCTGACTTGGAGCCAACGGTACAACGTCGCGGTTGGTGTGGCACGGGGCTTGGCTTACCTGCACGAGAAGTGCAGGGAGTGCATCATACACTGCGACGTCAAGCCGGAGAACATCCTCCTCGATCAGGAGATGGCGGCGAGGCTCGCGGACTTCGGCATGGCCAAGCTCGTCGGCCGCGACTTCAGCAGCGTCCTGACCACCATGCGGGGCACAGTGGGATACCTCGCGCCGGAGTGGCTAGCCGGCACGCC GGTCA CCGCAAAAGCCGACGTGTACAGCTTCGGGCTCCTGCTCTTCGAGCTCGTCTCGGGCCGGCGGAACAGCACCGCGCCGTCGTCGTCGTCGGAGGGCGGCCCTGGGATTTACTTCCCGGTTCATGCCGTGGTCAAGCTAAACGAAGGCGACGTGGCCGGGCTGGTCGACGAGAGGGTGGCCAAGGATGCCGACCCGAAGGAGGTTGAGAGACTCTGCAAGGTCGCGGGCTGGTGCATTCAAGACGAGGAAGGCGACCGGCCGACCATGGGGCTCGTCGTGCAGCAGCTCGAAGGCATCG CCAACGTAATGTTGCCGCCGATCCC TTCTCGGCTTCATATCCTGGCGATTGAGAACGAATGGGTCAGAGGTGTTCCAGAGGATGAGCGCTGCTCAAAGAGCGGTAGTAAACCAGAAACAGAAGCAATAGAAGAAATGTAGAACTGAAAAGAATCTGGGAGCACCCTACAGCTGAAGTGAAGATGCAGCGTCAGATATGAAAATGTAGTTGTAATGTCAGCATAGTTGATATTTCCCGTGTGGATGTATAGCCAGTACTGTACTGCAACTGTTCTGTAAATTCCTTAAATTCCGGAAACAGGATCAGACAAGTACCTTCTCTCGTTTTGTTCCCATCTAATTCTGGTCCATCCTTGCTGACAGCTGCACCTTTATTGAAGAAATC] [+] EMBL AK098866 [TTCAGCTACCGCGACCGGCTGCCGGGCGCCGTCGGCAACTTCATGCTGGACGTGAACGGGCAGATGCGGCGGCGGCAGTGGAGCGAGACGGCGGGGAAGTGGATCCTCTTCTGCTCGTTGCCCCACGACGCGTGCGACGTGTACGGCTCGTGCGGGCCCTTTGGAGTCTGCAGCAACGCCACCAACCCGGAGTGCCGGTGCCCCGCCGGCTTCGAGCCGCGGTCGTCGGAGGAGTGGAGGCTGGAGAACGCCGCCGGAGGCTGCGTGAGGCGGCACCCTCTCGAGTGTCACGGAGACGGGTTCCTGGCGCTGCCGTACACCGTGCGGCTCCCGAATGGCTCCGTGGAGGCGCCGGCCGGAGCTGGGAACGACAAGGCGTGCGCGCACACCTGCCTGGTCGACTGCTCCTGCACGGCCTACGTTCACGACGGAGCGAAGTGCCTCGTGTGGAACGGCGAGCTCGTCAACATGAAAGCCTACGCGGCTAATGAGAATGGCCAAGGCGATCCTGGCCTCGCCGGAGCGGTGCTTCACCTCCGTGTCGCCCACTCGGAGGTTCCGGCGTCGTCGACGGAGCACTCGTGGAAGAAATCGATGGTAATCCTTGGAAGCGTCGTTGCGGCGGTGGTGCTGCTCTTGGCGAGCCTCGTCACCGTGGTGGCGGTGGCGGCGGTGTTGCGGATGCGGCGTAGGAGGGGCAAGGTGACGGCGGTGCAGGGGTCGCTGCTGCTGCTCGACTACCATGCCGTGAAGACCGCGACGAGGGACTTCTCGGAGAAGCTCGGGAGCGGGAGCTTCGGCACGGTGTTCAAAGGCGCGCTGCCGGACGGGACGCCCGTGGCCGTCAAGAAGCTCGACGGTCTCCGGCAAGGCGAGAAGCAATTCAGAACGGAGGTGGTGACGCTCGGCATGATCCAGCACGTCAACCTCGTCCGACTCCGTGGCTTCTGCTGCGAGGGAAACAAGAGGGCGCTCGTGTACGACTACATGGCCAATGGCTCGCTGGACTCGCACCTGTTCGTCATGAGCGGCTCCAGCTCCGGCCCCGACTCCAAGCAGGTGACCCTGACTTGGAGCCAACGGTACAACGTCGCGGTTGGTGTGGCACGGGGCTTGGCTTACCTGCACGAGAAGTGCAGGGAGTGCATCATACACTGCGACGTCAAGCCGGAGAACATCCTCCTCGATCAGGAGATGGCGGCGAGGCTCGCGGACTTCGGCATGGCCAAGCTCGTCGGCCGCGACTTCAGCAGCGTCCTGACCACCATGCGGGGCACGGTGGGATACCTCGCGCCGGAGTGGCTAGCCGGCACGCC GGTCA CCGCAAAAGCCGACGTGTACAGCTTCGGGCTCCTGCTCTTCGAGCTCGTCTCGGGCCGGCGGAACAGCACCGCGCCGTCGTCGTCGTCGGAGGGCGGCCCTGGGATTTACTTCCCGGTTCATGCCGTGGTCAAGCTAAACGAAGGCGACGTGGCCGGGCTGGTCGACGAGAGGGTGGCCAAGGATGCCGACCCGAAGGAGGTTGAGAGACTCTGCAAGGTCGCGGGCTGGTGCATTCAAGACGAGGAAGGCGACCGGCCGACCATGGGGCTCGTCGTGCAGCAGCTCGAAGGCATCG CCAACGTAATGTTGCCGCCGATCCC TTCTCGGCTTCATATCCTGGCGATTGAGAACGAATGGGTCAGAGGTGTTCCAGGGGATGAGCGCTGCTCAAAGAGCGGTAGTAAACCAGAAACAGAAGCAATAGAAGAAATGTAGAACTGAAAAGAATCTGGGAGCACCCTACAGCTGAAGTGAAGATGCAGCGTCAGATATGAAAATGTAGTTGTAATGTCAGCATAGTTGATATTTCCCGTGTGGATGTATAGCCAGTACTGTACTGCAACTGTTCTGTAGATTCCTTAAATTCCGGAAACAGGATCAGACAAGTACCTTCTCTCG ] [+] EMBL AK098871 [TTCAGCTACCGCGACCGGCTGCCGGGCGCCGTCGGCAACTTCATGCTGGACGTGAACGGGCAGATGCGGCGGCGGCAGTGGAGCGAGACGGCGGGGAAGTGGATCCTCTTCTGCTCGTTGCCCCACGACGCGTGCGACGTGTACGGCTCGTGCGGGCCCTTTGGAGTCTGCAGCAACGCCACCAACCCGGAGTGCCGGTGCCCCGCCGGCTTCGAGCCGCGGTCGTCGGAGGAGTGGAGGCTGGAGAACGCCGCCGGAGGCTGCGTGAGGCGGCACCCTCTCGAGTGTCACGGAGACGGGTTCCTGGCGCTGCCGTACACCGTGCGGCTCCCGAATGGCTCCGTGGAGGCGCCGGCCGGAGCTGGGAACGACAAGGCGTGCGCGCACACCTGCCTGGTCGACTGCTCCTGCACGGCCTACGTTCACGACGGAGCGAAGTGCCTCGTGTGGAACGGCGAGCTCGTCAACATGAAAGCCTACGCGGCTAATGAGAATGGCCAAGGCGATCCTGGCCTCGCCGGAGCGGTGCTTCACCTCCGTGTCGCCCACTCGGAGGTTCCGGCGTCGTCGACGGAGCACTCGTGGAAGAAATCGATGGTAATCCTTGGAAGCGTCGTTGCGGCGGTGGTGCTGCTCTTGGCGAGCCTCGTCACCGTGGTGGCGGTGGCGGCGGTGTTGCGGATGCGGCGTAGGAGGGGCAAGGTGACGGCGGTGCAGGGGTCGCTGCTGCTGCTCGACTACCATGCCGTGAAGACCGCGACGAGGGACTTCTCGGAGAAGCTCGGGAGCGGGAGCTTCGGCACGGTGTTCAAAGGCGCGCTGCCGGACGGGACGCCCGTGGCCGTCAAGAAGCTCGACGGTCTCCGGCAAGGCGAGAAGCAATTCAGAACGGAGGTGGTGACGCTCGGCATGATCCAGCACGTCAACCTCGTCGGACTCCGTGGCTTCTGCTGCGAGGGAAACAAGAGGGCGCTCGTGTACGACTACATGGCCAATGGCTCGCTGGACTCGCACCTGTTCGTCATGAGCGGCTCCAGCTCCGGCCCCGACTCCAAGCAGGTGACCCTGACTTGGAGCCAACGGTACAACGTCGCGGTTGGTGTGGCACGGGGCTTGGCTTACCTGCACGAGAAGTGCAGGGAGTGCATCATACACTGCGACGTCAAGCCGGAGAACATCCTCCTCGATCAGGAGATGGCGGCGAGGCTCGCGGACTTCGGCATGGCCAAGCTCGTCGGCCGCGACTTCAGCAGCGTCCTGACCACCATGCGGGGCACGGTGGGATACCTCGCGCCGGAGTGGCTAGCCGGCACGCC GGTCA CCGCAAAAGCCGACGTGTACAGCTTCGGGCTCCTGCTCTTCGAGCTCGTCTCGGGCCGGCGGAACAGCACCGCGCCGTCGTCGTCGTCGGAGGGCGGCCCTGGGATTTACTTCCCGGTTCATGCCGTGGTCAAGCTAAACGAAGGCGACGTGGCCGGGCTGGTCGACGAGAGGGTGGCCAAGGATGCCGACCCGAAGGAGGTTGAGAGACTCTGCAAGGTCGCGGGCTGGTGCATTCAAGACGAGGAAGGCGACCGGCCGACCATGGGGCTCGTCGTGCAGCAGCTCGAAGGCATCG CCAACGTAATGTTGCCGCCGATCCC TTCTCGGCTTCATATCCTGGCGATTGAGAACGAATGGGTCAGAGGTGTTCCAGAGGATGAGCGCTGCTCAAAGAGCGGTAGTAAACCAGAAACAGAAGCAATAGAAGAAATGTAGAACTGAAAAGAATCTGGGAGCACCCTACAGCTGAAGTGAAGATGCAGCGTCAGATATGAAAATGTAGTTGTAATGTCAGCATAGTTGATATTTCCCGTGTGGATGTATAGCCAGTACTGTACTGCAACTGTTCTGTAAATTCCTTAAATTCCGGAAACAGGATCAGACAAGTACCT ] [-] EMBL AK067131 [ TCAGCTACCGCGACCGGCTGCCGGGCGCCGTCGGCAACTTCATGCTGGACGTGAACGGGCAGATGCGGCGGCGGCAGTGGAGCGAGACGGCGGGGAAGTGGATCCTCTTCTGCTCGTTGCCCCACGACGCGTGCGACGTGTACGGCTCGTGCGGGCCCTTTGGAGTCTGCAGCAACGCCACCAACCCGGAGTGCCGGTGCCCCGCCGGCTTCGAGCCGCGGTCGTCGGAGGAGTGGAGGCTGGAGAACGCCGCCGGAGGCTGCGTGAGGCGGCACCCTCTCGAGTGTCACGGAGACGGGTTCCTGGCGCTGCCGTACACCGTGCGGCTCCCGAATGGCTCCGTGGAGGCGCCGGCCGGAGCTGGGAACGACAAGGCGTGCGCGCACACCTGCCTGGTCGACTGCTCCTGCACGGCCTACGTTCACGACGGAGCGAAGTGCCTCGTGTGGAACGGCGAGCTCGTCAACATGAAAGCCTACGCGGCTAATGAGAACGGCCAAGGCGATCCTGGCCTCGCCGGAGCGGTGCTTCACCTCCGTGTCGCCCACTCGGAGGTTCCGGCGTCGTCGACGGAGCACTCGTGGAAGAAATCGATGGTAATCCTTGGAAGCGTCGTTGCGGCGGTGATGCTGCTCTTGGCGAGCCTCGTCACCGTGGTGGCGGTGGCGGCGGTGTTGCGGATGCGGCGTAGGAGGGGCAAGGTGACGGCGGTGCAGGGGTCGCTGCTGCTGCTCGACTACCATGCCGTGAAGACCGCGACGAGGGACTTCTCGGAGAAGCTCGGGAGCGGGAGCTTCGGCACGGTGTTCAAAGGCGCGCTGCCGGACGGGACGCCCGTGGCCGTCAAGAAGCTCGACGGTCTCCGGCAAGGCGAGAAGCAATTCAGAACGGAGGTGGTGACGCTCGGCATGATCCAGCACGTCAACCTCGTCCGACTCCGTGGCTTCTGCTGCGAGGGAAACAAGAGGGCGCTCGTGTACGACTACATGGCCAATGGCTCGCTGGACTCGCACCTGTTCGTCATGAGCGGCTCCAGCTCCGGCCCCGACTCCAAGCAGGTGACCCTGACTTGGAGCCAACGGTACAACGTCGCGGTTGGTGTGGCACGGGGCTTGGCTTACCTGCACGAGAAGTGCAGGGAGTGCATCATACACTGCGACGTCAAGCCGGAGAACATCCTCCTCGATCAGGAGATGGCGGCGAGGCTCGCGGACTTCGGCATGGCCAAGCTCGTCGGCCGCGACTTCAGCAGCGTCCTGACCACCATGCGGGGCACGGTGGGATACCTCGCGCCGGAGTGGCTAGCCGGCACGCC GGTCA CCGCAAAAGCCGACGTGTACAGCTTCGGGCTCCTGCTCTTCGAGCTCGTCTCGGGCCGGCGGAACAGCACCGCGCCGTCGTCGTCGTCGGAGGGCGGCCCTGGGATTTACTTCCCGGTTCATGCCGTGGTCAAGCTAAACGAAGGCGACGTGGCCGGGCTGGTCGACGAGAGGGTGGCCAAGGATGCCGACCCGAAGGAGGTTGAGAGACTCTGCAAGGTCGCGGGCTGGTGCATTCAAGACGAGGAAGGCGACCGGCCGACCATGGGGCTCGTCGTGCAGCAGCTCGAAGGCATC ] [+] EMBL CB647951 [ GTCAACACGAAAGCCTACGCGGCTAATGAGAATGGCCAAGGCGATCCTGGCCTCGCCGGAGCGGTGCTTCACCTCCGTGTCGCCCACTCGGAGGTTCCGGCGTCGTCGACGGAGCACTCGTGGAAGAAATCGATGGTAATCCTTGGAAGCGTCGTTGCGGCGGTGGTGCTGCTCTTGGCGAGCCTCGTCACCGTGGTGGCGGTGGCGGCGGTGTTGCGGATGCGGCGTAGGAGGGGCAAGGTGACGGCGGTGCAGGGGTCGCTGCTGCTGCTCGACTACCATGCCGTGAAGACCGCGACGAGGGACTTCTCGGAGAAGCTCGGGAGCGGGAGCTTCGGCACGGTGTTCAAAGGCGCGCTGCCGGACGGGACGCCCGTGGCCGTCAAGAAGCTCGACGGTCTCCGGCAAGGCGAGAAGCAATTCAGAACGGAGGTGGTGACGCTCGGCATGATCCAGCACGTCAACCTCGTCCGACTCCGTGGCTTCTGCTGCGAGGGAAACAAGAGGGCGCTCGTGTACGACTACATGGCCAATGGCTCGCTGGACTCGCACCTGTTCGTCATGAGCGGCTCCAGCTCCGGCCCCGACTCCAAGCAGGTGACCCTGACTTGGAGCCAACGGTACAACGTCGCGGTTGGTGTGGCACGGGGCTTGGCTTACCTGCACGAGAAGTGCAGGGAGTGCATCATACACTGCGACGTCAAGCCGGAGAACATC ] [+] EMBL CB655448 [ AGGTGCCTGCGGTGCAGGGGTCGCTGCTGCTGCTCGACTACCATGCCGTGAAGACCGCGACGAGGGACTTCTCGGAGAAGCTCGGGAGCGGGAGCTTCGGCACGGTGTTCAAAGGCGCGCTGCCGGACGGGACGCCCGTGGCCGTCAAGAAGCTCGACGGTCTCCGGCAAGGCGAGAAGCAATTCAGAACGGAGGTGGTGACGCTCGGCATGATCCAGCACGTCAACCTCGTCCGACTCCGTGGCTTCTGCTGCGAGGGAAACAAGAGGGCGCTCGTGTACGACTACATGGCCAATGGCTCGCTGGACTCGCACCTGTTCGTCATGAGCGGCTCCAGCTCCGGCCCCGACTCCAAGCAGGTGACCCTGACTTGGAGCCAACGGTACAACGTCGCGGTTGGTGTGGCACGGGGCTTGGCTTACCTGCACGAGAAGTGCAGGGAGTGCATCATACACTGCGACGTCAAGCCGGAGAACATCCTCCTCGATCAGGAGATGGCGGCGAGGCTCGCGGACTTCGGCATGGCCAAGCTCGTCGGCCGCGACTTCAGCAGCGTCCTGACCACCATGCGGGGCACGGTGGGATACCTCGCGCCGGAGTGGCTAGCCGGCACGCC GGTCACCCGCAAAAGCCGA ] [+] EMBL AU065674 [ ACTCGCACCTGTTCGTCATGAGCGGCTCCAGCTCCGGCCCCGACTCCAAGCAGGTGACCCTGACTTGGAGCCAACGGTACAACGTCGCGGTTGGTGTGGCACGGGGCTTGGCTTACCTGCACGAGAAGTGCAGGGAGTGCATCATACACTGCGACGTCAAGCCGGAGAACATCCTCCTCGATCAGGAGATGGCGGCGAGGCTCGCGGACTTCGGCATGGCCAAGCTCGTCGGCCGCGACTTCAGCAGCGTCCTGACCACCATGCGGGGCACGGTGGGATACCTCGCGCCGGAGTGGCTAACCGGCACGCCGGGTCA CCGCAAAA CCGACGTGTAnaanttt ] [-] EMBL CB647952 [ ACATCCTCCTCGATCAGGAGATGGCGGCGAGGCTCGCGGACTTCGGCATGGCCAAGCTCGTCGGCCGCGACTTCAGCAGCGTCCTGACCACCATGCGGGGCACGGTGGGATACCTCGCGCCGGAGTGGCTAGCCGGCACGCC GGTCA CCGCAAAAGCCGACGTGTACAGCTTCGGGCTCCTGCTCTTCGAGCTCGTCTCGGGCCGGCGGAACAGCACCGCGCCGTCGTCGTCGTCGGAGGGCGGCCCTGGGATTTACTTCCCGGTTCATGCCGTGGTCAAGCTAAACGAAGGCGACGTGGCCGGGCTGGTCGACGAGAGGGTGGCCAAGGATGCCGACCCGAAGGAGGTTGAGAGACTCTGCAAGGTCGCGGGCTGGTGCATTCAAGACGAGGAAGGCGACCGGCCGACCATGGGGCTCGTCGTGCAGCAGCTCGAAGGCATCG CCAACGTAATGTTGCCGCCGATCCC TTCTCGGCTTCATATCCTGGCGATTGAGAACGAATGGGTCAGAGGTGTTCCAGAGGATGAGCGCTGCTCAAAGAGCGGTAGTAAACCAGAAACAGAAGCAATAGAAGAAATGTAGAACTGAAAAGAATCTGGGAGCACCCTACAGCTGAAGTGAAGATGCAGCGTCAGATATGAAAATGTAGTTGTAATGTCAGCATAGTTGATATTTCCCGTGTGGATGTATAGCCAGTACTGTACTGCAACTGTTCTGTAAATTCCTTAAGTTCCGGAAACAGGATCAGACAAGTACCTTCTC ] [-] EMBL CB655449 [ GCGGGGCACGGTGGGATACCTCGCGCCGGAGTGGCTAGCCGGCACGCC GGTCA CCGCAAAAGCCGACGTGTACAGCTTCGGGCTCCTGCTCTTCGAGCTCGTCTCGGGCCGGCGGAACAGCACCGCGCCGTCGTCGTCGTCGGAGGGCGGCCCTGGGATTTACTTCCCGGTTCATGCCGTGGTCAAGCTAAACGAAGGCGACGTGGCCGGGCTGGTCGACGAGAGGGTGGCCAAGGATGCCGACCCGAAGGAGGTTGAGAGACTCTGCAAGGTCGCGGGCTGGTGCATTCAAGACGAGGAAGGCGACCGGCCGACCATGGGGCTCGTCGTGCAGCAGCTCGAAGGCATCG CCAACGTAATGTTGCCGCCGATCCC TTCTCGGCTTCATATCCTGGCGATTGAGAACGAATGGGTCAGAGGTGTTCCAGAGGATGAGCGCTGCTCAAAGAGCGGTAGTAAACCAGAAACAGAAGCAATAGAAGAAATGTAGAACTGAAAAGAATCTGGGAGCACCCTACAGCTGAAGTGAAGATGCAGCGTCAGATATGAAAATGTAGTTGTAATGTCAGCATAGGTGATATTTCCCGTGTGGATGTATAGCCAGTACTGTACTGCAACTGTTCTGTAAATTCCTTGAATTCTGAAAGCAGGATCATACAAGCAC ] [+] EMBL C22635 [ TCGCCCAACGTAATGTTGCCGCCGATCCCTTTTTCGGCTTCATATCCTGGCGATTGAGAACGAATGGGTCAGAGGTGTTCCAGAGGATGAGCGCTGCTCAAAGAGCGGTAGTAAACCAGAAACAGAAGCAATAGAAGAAATGTAGAACTGAAAAGAATCTGGGAGCACCCTACAGCTGAAGTGAAGATGCAGCGTCAGATATGAAAATGTAGTTGTAATGTCAGCATAGTTGATATTTCCCGTGTGGATGTATAGCCAGTACTGTACTGCAACTGTTCTGTAAATTCCTTAAATTCCGGAAACAGGATCAGACAAGTACNTTCTCTCGTTTTG ] consensusID : consensus_14024#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 745 fasta sequence [GCTCGTCGGCCGCGACTTCAGCAGCGTCCTGACCACCATGGGGGGCACGGTGGGATACCTCGCGCCGGAGTGGCTAGCCGGCACGCCGGTCACCGCAAAAGCCGACGTGTACAGCTTCGGGCTCCTGCTCTTCGAGCTCGTCTCGGGCCGGCGGAACAGCACCGCGCCGTCGTCCTCGTCGGAGGGCGGCCCTGGGATTTACTTCCCGGTTCATGCCGTGGTC-AAG-C-TAAA-CGAA-GGCGACGTGGCCGGGCTGGTCGACGAGAGGGTGGCCAAGGATGCCGACCCGAAGGAGGTTGAGAGACTCTGCAAGGTCGCGGGCTGGTGCATTCAAGACGAGGAAGGCGACCGGCCGACCATGGGGCTCGTCGTGCAGCAGCTCGAAGGCATCGCCAACGTAATGTTGCCGCCGATCCCTTCTCGGCTTCATATCCTGGCGATTGAGAACGAATGGGTCAGAGGTGTTCCA-GAGGATGAGCGCTGCTCAAAGAGCGGTAGTAAACCAGAAACAGAAGCAATAGAAGAAATGTAGAACTGAAAAGAATCTGGGAGCACCCTACAGCTGAAGTGAAGATGCAGCGTCAGATATGAAAATGTAGTTGTAATGTCAGCATAGTTGATATTTCCCGTGTGGATGTATAGCCAGTACTGTACTGCAACTGTTCTGTAAATTCCTTAAATTCCGGAAACAGGATCAGACAAGTACCTTCTCTCGTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] [-] EMBL CB674586 [GCTCGTCGGCCGCGACTTCAGCAGCGTCCTGACCACCATGGGGGGCACGGTGGGATACCTCGCGCCGGAGTGGCTAGCCGGCACGCCGGTCACCGCAAAAGCCGACGTGTACAGCTTCGGGCTCCTGCTCTTCGAGCTCGTCTCGGGCCGGCGGAACAGCACCGCGCCGTCGTCCTCGTCGGAGGGCGGCCCTGGGATTTACTTCCCGGTTCATGCCGTGGTC AAG C TAAA CGAA GGCGACGTGGCCGGGCTGGTCGACGAGAGGGTGGCCAAGGATGCCGACCCGAAGGAGGTTGAGAGACTCTGCAAGGTCGCGGGCTGGTGCATTCAAGACGAGGAAGGCGACCGGCCGACCATGGGGCTCGTCGTGCAGCAGCTCGAAGGCATCGCCAACGTAATGTTGCCGCCGATCCCTTCTCGGCTTCATATCCTGGCGATTGAGAACGAATGGGTCAGAGGTGTTCCA GAGGATGAGCGCTGCTCAAAGAGCGGTAGTAAACCAGAAACAGAAGCAATAGAAGAAATGTAGAACTGAAAAGAATCTGGGAGCACCCTACAGCTGAAGTGAAGATGCAGCGTCAGATATGAAAATGTAGTTGTAATGTCAGCATAGTTGATATTTCCCGTGTGGATGTATAGCCAGTACTGTACTGCAACTGTTCTGTAAATTCCTTAAATTCCGGAAACGGGATCAGACAAGTACCTTCTCTCGTTTTAAAAAAAAggg ] [+] EMBL AU030341 [ nCCNGCACGCCGTTCACCGCAAAAGCCGACGTGTACAGCTTCGGGCTCCT NTCTTCGAGCTCGTCTCGGGCCGGCGGAACAGCACCGCGCCGTCGTCGTCGTCGGAGGGCGGCCCTGGGATTTACTTCCCGGTTCATGCCGTGGTC AAG C TAAA CGAA GGCGACNTGGCCGGGCTGGTCGACGAGAGGGTGGCCAAGGATGCCGACCCGAAGGAGGTTGAGAGACTCTGCAAGGTCGCGGGCTGGTGCATTCAAGACGAGGAAGGCGACCGGCCGACCATGGGGCTCGTCGTGCAGCAGCTCGAAGGCATCGCCAACGTAATGTTGCCGCCGATCCCTTCTCGGCTTCATATCCTGGCGATTGAGAACGAATGGGTCAGAGGTGTTCCA GAGGATGAGCGCTGCTCAAAGAGCGGTAGTAAACCAGAAACAGAAGCAATAGAAGCAATGTAGAACTGAAAAGAATCTGGGAGCNCCCTACAGCTGAAGTGAAGATGCAGCGTCAGATATGAAAATGTAGTTGTAATGTCAGCATAGTTGATATTTCCCGTGTGGATGTATAGCCNGTNCTGTACTGCAACTGTTCTGTAAATTCCTTAAATTCCGGAAACAGGATCAGANAAGTNCCTTNTNTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL BI808347 [ GTTCAT CC TGTTCAAAGTCTTAAACCGAAGGGCGAC T GCC GGCTGGTCGACGAGA GGT GCCAAGGAT CCGACCCGAAGGAGGTTGAGAGACTCTGCAAGGTC CGGGCTGGT CATTCAAGACGAGGAAGGCGACC GCCGACCAT GGGCTCTTCGTGCAGCAGCTCGAAGGCATCGCCGACGTAATGTTGCC CCGATCCCTTCTCGGCTTCATATCCTGGCGATTGAGAACGAATGGGTCAGAGGTGTTCCACGAGGATGAGC CTGCTCAAAGA CGGTAGTAAACCAGAAACAGAAGC ATAGAAGAAATGTAGAACTGAAAAGAATCTGGGAGCACCCTACAGCTGAAGTGAAGATGCAGCGTCAGATATGAAAATGTAGTTGTAATGTCAGCATAGTTGATATTTCCCGTGTGGATGTATAGCCAGTACTGTACGGCAACTGTTCTGTAAATTCCTTAAATTCTGGAAACAGGATCAGACAAGTACCTTCTCTCGTTTTGTTCCAAAAAAAAAA ] [+] EMBL BI809988 [ TCGACGAGAGGGTGCCCAAGGAT CCGACCCGAAGGA GTTGAGAGACTCTGCAA GTC CGGGCTGGTGCATTCAAGACGAGGAAGGCGACCGGCCGACCATGGGGCTCGTCGTGCA CAGCTCGAAGGCATCGCCGACGTAATGTTGCC CCGATCCCTTCTCGGCTTCATATCCTGGCGATTGAGAACGAATGGGTCAGAGGTGTTCCA GAGGATGAGCGCTGCTCAAAGAGCGGTAGTAAACCAGAAACAGAAGCCATAGAAGAAATGTAGAACTGAAAAGAATCTGGGAGCACCCTACAGCTGAAGTGAAGATGCAGCGTCAGATATGAAAATGTAGTTGTAATGTCAGCATAGTTGATATTTCCCGTGTGGATGTATAGCCAGTACTGTACGGCAACTGTTCTGTAAATTCCTTAAATTCTGGAAACAGGATCAGACAAGTACCTTCTCTCGTTTAAAAAAAAAA ] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_14024#0 TTCAGCTACCGCGACCGGCTGCCGGGCGCCGTCGGCAACTTCATGCTGGACGTGAACGGG 60 consensus_14024#1 ------------------------------------------------------------ consensus_14024#0 CAGATGCGGCGGCGGCAGTGGAGCGAGACGGCGGGGAAGTGGATCCTCTTCTGCTCGTTG 120 consensus_14024#1 ------------------------------------------------------------ consensus_14024#0 CCCCACGACGCGTGCGACGTGTACGGCTCGTGCGGGCCCTTTGGAGTCTGCAGCAACGCC 180 consensus_14024#1 ------------------------------------------------------------ consensus_14024#0 ACCAACCCGGAGTGCCGGTGCCCCGCCGGCTTCGAGCCGCGGTCGTCGGAGGAGTGGAGG 240 consensus_14024#1 ------------------------------------------------------------ consensus_14024#0 CTGGAGAACGCCGCCGGAGGCTGCGTGAGGCGGCACCCTCTCGAGTGTCACGGAGACGGG 300 consensus_14024#1 ------------------------------------------------------------ consensus_14024#0 TTCCTGGCGCTGCCGTACACCGTGCGGCTCCCGAATGGCTCCGTGGAGGCGCCGGCCGGA 360 consensus_14024#1 ------------------------------------------------------------ consensus_14024#0 GCTGGGAACGACAAGGCGTGCGCGCACACCTGCCTGGTCGACTGCTCCTGCACGGCCTAC 420 consensus_14024#1 ------------------------------------------------------------ consensus_14024#0 GTTCACGACGGAGCGAAGTGCCTCGTGTGGAACGGCGAGCTCGTCAACATGAAAGCCTAC 480 consensus_14024#1 ------------------------------------------------------------ consensus_14024#0 GCGGCTAATGAGAATGGCCAAGGCGATCCTGGCCTCGCCGGAGCGGTGCTTCACCTCCGT 540 consensus_14024#1 ------------------------------------------------------------ consensus_14024#0 GTCGCCCACTCGGAGGTTCCGGCGTCGTCGACGGAGCACTCGTGGAAGAAATCGATGGTA 600 consensus_14024#1 ------------------------------------------------------------ consensus_14024#0 ATCCTTGGAAGCGTCGTTGCGGCGGTGGTGCTGCTCTTGGCGAGCCTCGTCACCGTGGTG 660 consensus_14024#1 ------------------------------------------------------------ consensus_14024#0 GCGGTGGCGGCGGTGTTGCGGATGCGGCGTAGGAGGGGCAAGGTGACGGCGGTGCAGGGG 720 consensus_14024#1 ------------------------------------------------------------ consensus_14024#0 TCGCTGCTGCTGCTCGACTACCATGCCGTGAAGACCGCGACGAGGGACTTCTCGGAGAAG 780 consensus_14024#1 ------------------------------------------------------------ consensus_14024#0 CTCGGGAGCGGGAGCTTCGGCACGGTGTTCAAAGGCGCGCTGCCGGACGGGACGCCCGTG 840 consensus_14024#1 ------------------------------------------------------------ consensus_14024#0 GCCGTCAAGAAGCTCGACGGTCTCCGGCAAGGCGAGAAGCAATTCAGAACGGAGGTGGTG 900 consensus_14024#1 ------------------------------------------------------------ consensus_14024#0 ACGCTCGGCATGATCCAGCACGTCAACCTCGTCCGACTCCGTGGCTTCTGCTGCGAGGGA 960 consensus_14024#1 ------------------------------------------------------------ consensus_14024#0 AACAAGAGGGCGCTCGTGTACGACTACATGGCCAATGGCTCGCTGGACTCGCACCTGTTC 1020 consensus_14024#1 ------------------------------------------------------------ consensus_14024#0 GTCATGAGCGGCTCCAGCTCCGGCCCCGACTCCAAGCAGGTGACCCTGACTTGGAGCCAA 1080 consensus_14024#1 ------------------------------------------------------------ consensus_14024#0 CGGTACAACGTCGCGGTTGGTGTGGCACGGGGCTTGGCTTACCTGCACGAGAAGTGCAGG 1140 consensus_14024#1 ------------------------------------------------------------ consensus_14024#0 GAGTGCATCATACACTGCGACGTCAAGCCGGAGAACATCCTCCTCGATCAGGAGATGGCG 1200 consensus_14024#1 ------------------------------------------------------------ consensus_14024#0 GCGAGGCTCGCGGACTTCGGCATGGCCAAGCTCGTCGGCCGCGACTTCAGCAGCGTCCTG 1260 consensus_14024#1 -----------------------------GCTCGTCGGCCGCGACTTCAGCAGCGTCCTG 31 ******************************* consensus_14024#0 ACCACCATGCGGGGCACGGTGGGATACCTCGCGCCGGAGTGGCTAGCCGGCACGCCGGTC 1320 consensus_14024#1 ACCACCATGGGGGGCACGGTGGGATACCTCGCGCCGGAGTGGCTAGCCGGCACGCCGGTC 91 ********* ************************************************** consensus_14024#0 ACCGCAAAAGCCGACGTGTACAGCTTCGGGCTCCTGCTCTTCGAGCTCGTCTCGGGCCGG 1380 consensus_14024#1 ACCGCAAAAGCCGACGTGTACAGCTTCGGGCTCCTGCTCTTCGAGCTCGTCTCGGGCCGG 151 ************************************************************ consensus_14024#0 CGGAACAGCACCGCGCCGTCGTCGTCGTCGGAGGGCGGCCCTGGGATTTACTTCCCGGTT 1440 consensus_14024#1 CGGAACAGCACCGCGCCGTCGTCCTCGTCGGAGGGCGGCCCTGGGATTTACTTCCCGGTT 211 *********************** ************************************ consensus_14024#0 CATGCCGTGGTCAAGCTAAACGAAGGCGACGTGGCCGGGCTGGTCGACGAGAGGGTGGCC 1500 consensus_14024#1 CATGCCGTGGTCAAGCTAAACGAAGGCGACGTGGCCGGGCTGGTCGACGAGAGGGTGGCC 271 ************************************************************ consensus_14024#0 AAGGATGCCGACCCGAAGGAGGTTGAGAGACTCTGCAAGGTCGCGGGCTGGTGCATTCAA 1560 consensus_14024#1 AAGGATGCCGACCCGAAGGAGGTTGAGAGACTCTGCAAGGTCGCGGGCTGGTGCATTCAA 331 ************************************************************ consensus_14024#0 GACGAGGAAGGCGACCGGCCGACCATGGGGCTCGTCGTGCAGCAGCTCGAAGGCATCGCC 1620 consensus_14024#1 GACGAGGAAGGCGACCGGCCGACCATGGGGCTCGTCGTGCAGCAGCTCGAAGGCATCGCC 391 ************************************************************ consensus_14024#0 AACGTAATGTTGCCGCCGATCCCTTCTCGGCTTCATATCCTGGCGATTGAGAACGAATGG 1680 consensus_14024#1 AACGTAATGTTGCCGCCGATCCCTTCTCGGCTTCATATCCTGGCGATTGAGAACGAATGG 451 ************************************************************ consensus_14024#0 GTCAGAGGTGTTCCAGAGGATGAGCGCTGCTCAAAGAGCGGTAGTAAACCAGAAACAGAA 1740 consensus_14024#1 GTCAGAGGTGTTCCAGAGGATGAGCGCTGCTCAAAGAGCGGTAGTAAACCAGAAACAGAA 511 ************************************************************ consensus_14024#0 GCAATAGAAGAAATGTAGAACTGAAAAGAATCTGGGAGCACCCTACAGCTGAAGTGAAGA 1800 consensus_14024#1 GCAATAGAAGAAATGTAGAACTGAAAAGAATCTGGGAGCACCCTACAGCTGAAGTGAAGA 571 ************************************************************ consensus_14024#0 TGCAGCGTCAGATATGAAAATGTAGTTGTAATGTCAGCATAGTTGATATTTCCCGTGTGG 1860 consensus_14024#1 TGCAGCGTCAGATATGAAAATGTAGTTGTAATGTCAGCATAGTTGATATTTCCCGTGTGG 631 ************************************************************ consensus_14024#0 ATGTATAGCCAGTACTGTACTGCAACTGTTCTGTAAATTCCTTAAATTCCGGAAACAGGA 1920 consensus_14024#1 ATGTATAGCCAGTACTGTACTGCAACTGTTCTGTAAATTCCTTAAATTCCGGAAACAGGA 691 ************************************************************ consensus_14024#0 TCAGACAAGTACCTTCTCTCGTTTTGTTCCCATCTAATTCTGGTCCATCCTTGCTGACAG 1980 consensus_14024#1 TCAGACAAGTACCTTCTCTCGTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAA------ 745 ************************* * ** * consensus_14024#0 CTGCACCTTTATTGAAGAAATC 2002 consensus_14024#1 ---------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||