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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14024#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 2002 fasta sequence
[TTCAGCTACCGCGACCGGCTGCCGGGCGCCGTCGGCAACTTCATGCTGGACGTGAACGGGCAGATGCGGCGGCGGCAGTGGAGCGAGACGGCGGGGAAGTGGATCCTCTTCTGCTCGTTGCCCCACGACGCGTGCGACGTGTACGGCTCGTGCGGGCCCTTTGGAGTCTGCAGCAACGCCACCAACCCGGAGTGCCGGTGCCCCGCCGGCTTCGAGCCGCGGTCGTCGGAGGAGTGGAGGCTGGAGAACGCCGCCGGAGGCTGCGTGAGGCGGCACCCTCTCGAGTGTCACGGAGACGGGTTCCTGGCGCTGCCGTACACCGTGCGGCTCCCGAATGGCTCCGTGGAGGCGCCGGCCGGAGCTGGGAACGACAAGGCGTGCGCGCACACCTGCCTGGTCGACTGCTCCTGCACGGCCTACGTTCACGACGGAGCGAAGTGCCTCGTGTGGAACGGCGAGCTCGTCAACATGAAAGCCTACGCGGCTAATGAGAATGGCCAAGGCGATCCTGGCCTCGCCGGAGCGGTGCTTCACCTCCGTGTCGCCCACTCGGAGGTTCCGGCGTCGTCGACGGAGCACTCGTGGAAGAAATCGATGGTAATCCTTGGAAGCGTCGTTGCGGCGGTGGTGCTGCTCTTGGCGAGCCTCGTCACCGTGGTGGCGGTGGCGGCGGTGTTGCGGATGCGGCGTAGGAGGGGCAAGGTGACGGCGGTGCAGGGGTCGCTGCTGCTGCTCGACTACCATGCCGTGAAGACCGCGACGAGGGACTTCTCGGAGAAGCTCGGGAGCGGGAGCTTCGGCACGGTGTTCAAAGGCGCGCTGCCGGACGGGACGCCCGTGGCCGTCAAGAAGCTCGACGGTCTCCGGCAAGGCGAGAAGCAATTCAGAACGGAGGTGGTGACGCTCGGCATGATCCAGCACGTCAACCTCGTCCGACTCCGTGGCTTCTGCTGCGAGGGAAACAAGAGGGCGCTCGTGTACGACTACATGGCCAATGGCTCGCTGGACTCGCACCTGTTCGTCATGAGCGGCTCCAGCTCCGGCCCCGACTCCAAGCAGGTGACCCTGACTTGGAGCCAACGGTACAACGTCGCGGTTGGTGTGGCACGGGGCTTGGCTTACCTGCACGAGAAGTGCAGGGAGTGCATCATACACTGCGACGTCAAGCCGGAGAACATCCTCCTCGATCAGGAGATGGCGGCGAGGCTCGCGGACTTCGGCATGGCCAAGCTCGTCGGCCGCGACTTCAGCAGCGTCCTGACCACCATGCGGGGCACGGTGGGATACCTCGCGCCGGAGTGGCTAGCCGGCACGCC-GGTCA-CCGCAAAAGCCGACGTGTACAGCTTCGGGCTCCTGCTCTTCGAGCTCGTCTCGGGCCGGCGGAACAGCACCGCGCCGTCGTCGTCGTCGGAGGGCGGCCCTGGGATTTACTTCCCGGTTCATGCCGTGGTCAAGCTAAACGAAGGCGACGTGGCCGGGCTGGTCGACGAGAGGGTGGCCAAGGATGCCGACCCGAAGGAGGTTGAGAGACTCTGCAAGGTCGCGGGCTGGTGCATTCAAGACGAGGAAGGCGACCGGCCGACCATGGGGCTCGTCGTGCAGCAGCTCGAAGGCATCG-CCAACGTAATGTTGCCGCCGATCCC-TTCTCGGCTTCATATCCTGGCGATTGAGAACGAATGGGTCAGAGGTGTTCCAGAGGATGAGCGCTGCTCAAAGAGCGGTAGTAAACCAGAAACAGAAGCAATAGAAGAAATGTAGAACTGAAAAGAATCTGGGAGCACCCTACAGCTGAAGTGAAGATGCAGCGTCAGATATGAAAATGTAGTTGTAATGTCAGCATAGTTGATATTTCCCGTGTGGATGTATAGCCAGTACTGTACTGCAACTGTTCTGTAAATTCCTTAAATTCCGGAAACAGGATCAGACAAGTACCTTCTCTCGTTTTGTTCCCATCTAATTCTGGTCCATCCTTGCTGACAGCTGCACCTTTATTGAAGAAATC]
[+] EMBL AK060765 [TTCAGCTACCGCGACCGGCTGCCGGGCGCCGTCGGCAACTTCATGCTGGACGTGAACGGGCAGATGCGGCGGCGGCAGTGGAGCGAGACGGCGGGGAAGTGGATCCTCTTCTGCTCGTTGCCCCACGACGCGTGCGACGTGTACGGCTCGTGCGGGCCCTTTGGAGTCTGCAGCAACGCCACCAACCCGGAGTGCCGGTGCCCCGCCGGTTTCGAGCCGCGGTCGTCGGAGGAGTGGAGGCTGGAGAACGCCGCCGGAGGCTGCGTGAGGCGGCACCCTCTCGAGTGTCACGGAGACGGGTTCCTGGCGCTGCCGTACACCGTGCGGCTCCCGAATGGCTCCGTGGAGGCGCCGGCCGGAGCTGGGAACGACAAGGCGTGCGCGCACACCTGCCTGGTCGACTGCTCCTGCACGGCCTACGTTCACGACGGAGCGAAGTGCCTCGTGTGGAACGGCGAGCTCGTCAACATGAAAGCCTACGCGGCTAATGAGAATGGCCAAGGCGATCCTGGCCTCGCCGGAGCGGTGCTTCACCTCCGTGTCGCCCACTCGGAGGTTCCGGCGTCGTCGACGGAGCACTCGTGGAAGAAATCGATGGTAATCCTTGGAAGCGTCGTTGCGGCGGTGGTGCTGCTCTTGGCGAGCCTCGTCACCGTGGTGGCGGTGGCGGCGGTGTTGCGGATGCGGCGTAGGAGGGGCAAGGTGACGGCGGTGCAGGGGTCGCTGCTGCTGCTCGACTACCATGCCGTGAAGACCGCGACGAGGGACTTCTCGGAGAAGCTCGGGAGCGGGAGCTTCGGCACGGTGTTCAAAGGCGCGCTGCCGGACGGGACGCCCGTGGCCGTCAAGAAGCTCGACGGTCTCCGGCAAGGCGAGAAGCAATTCAGAACGGAGGTGGTGACGCTCGGCATGATCCAGCACGTCAACCTCGTCCGACTCCGTGGCTTCTGCTGCGAGGGAAACAAGAGGGCGCTCGTGTACGACTACATGGCCAATGGCTCGCTGGACTCGCACCTGTTCGTCATGAGCGGCTCCAGCTCCGGCCCCGACTCCAAGCAGGTGACCCTGACTTGGAGCCAACGGTACAACGTCGCGGTTGGTGTGGCACGGGGCTTGGCTTACCTGCACGAGAAGTGCAGGGAGTGCATCATACACTGCGACGTCAAGCCGGAGAACATCCTCCTCGATCAGGAGATGGCGGCGAGGCTCGCGGACTTCGGCATGGCCAAGCTCGTCGGCCGCGACTTCAGCAGCGTCCTGACCACCATGCGGGGCACAGTGGGATACCTCGCGCCGGAGTGGCTAGCCGGCACGCC GGTCA CCGCAAAAGCCGACGTGTACAGCTTCGGGCTCCTGCTCTTCGAGCTCGTCTCGGGCCGGCGGAACAGCACCGCGCCGTCGTCGTCGTCGGAGGGCGGCCCTGGGATTTACTTCCCGGTTCATGCCGTGGTCAAGCTAAACGAAGGCGACGTGGCCGGGCTGGTCGACGAGAGGGTGGCCAAGGATGCCGACCCGAAGGAGGTTGAGAGACTCTGCAAGGTCGCGGGCTGGTGCATTCAAGACGAGGAAGGCGACCGGCCGACCATGGGGCTCGTCGTGCAGCAGCTCGAAGGCATCG CCAACGTAATGTTGCCGCCGATCCC TTCTCGGCTTCATATCCTGGCGATTGAGAACGAATGGGTCAGAGGTGTTCCAGAGGATGAGCGCTGCTCAAAGAGCGGTAGTAAACCAGAAACAGAAGCAATAGAAGAAATGTAGAACTGAAAAGAATCTGGGAGCACCCTACAGCTGAAGTGAAGATGCAGCGTCAGATATGAAAATGTAGTTGTAATGTCAGCATAGTTGATATTTCCCGTGTGGATGTATAGCCAGTACTGTACTGCAACTGTTCTGTAAATTCCTTAAATTCCGGAAACAGGATCAGACAAGTACCTTCTCTCGTTTTGTTCCCATCTAATTCTGGTCCATCCTTGCTGACAGCTGCACCTTTATTGAAGAAATC]
[+] EMBL AK098866 [TTCAGCTACCGCGACCGGCTGCCGGGCGCCGTCGGCAACTTCATGCTGGACGTGAACGGGCAGATGCGGCGGCGGCAGTGGAGCGAGACGGCGGGGAAGTGGATCCTCTTCTGCTCGTTGCCCCACGACGCGTGCGACGTGTACGGCTCGTGCGGGCCCTTTGGAGTCTGCAGCAACGCCACCAACCCGGAGTGCCGGTGCCCCGCCGGCTTCGAGCCGCGGTCGTCGGAGGAGTGGAGGCTGGAGAACGCCGCCGGAGGCTGCGTGAGGCGGCACCCTCTCGAGTGTCACGGAGACGGGTTCCTGGCGCTGCCGTACACCGTGCGGCTCCCGAATGGCTCCGTGGAGGCGCCGGCCGGAGCTGGGAACGACAAGGCGTGCGCGCACACCTGCCTGGTCGACTGCTCCTGCACGGCCTACGTTCACGACGGAGCGAAGTGCCTCGTGTGGAACGGCGAGCTCGTCAACATGAAAGCCTACGCGGCTAATGAGAATGGCCAAGGCGATCCTGGCCTCGCCGGAGCGGTGCTTCACCTCCGTGTCGCCCACTCGGAGGTTCCGGCGTCGTCGACGGAGCACTCGTGGAAGAAATCGATGGTAATCCTTGGAAGCGTCGTTGCGGCGGTGGTGCTGCTCTTGGCGAGCCTCGTCACCGTGGTGGCGGTGGCGGCGGTGTTGCGGATGCGGCGTAGGAGGGGCAAGGTGACGGCGGTGCAGGGGTCGCTGCTGCTGCTCGACTACCATGCCGTGAAGACCGCGACGAGGGACTTCTCGGAGAAGCTCGGGAGCGGGAGCTTCGGCACGGTGTTCAAAGGCGCGCTGCCGGACGGGACGCCCGTGGCCGTCAAGAAGCTCGACGGTCTCCGGCAAGGCGAGAAGCAATTCAGAACGGAGGTGGTGACGCTCGGCATGATCCAGCACGTCAACCTCGTCCGACTCCGTGGCTTCTGCTGCGAGGGAAACAAGAGGGCGCTCGTGTACGACTACATGGCCAATGGCTCGCTGGACTCGCACCTGTTCGTCATGAGCGGCTCCAGCTCCGGCCCCGACTCCAAGCAGGTGACCCTGACTTGGAGCCAACGGTACAACGTCGCGGTTGGTGTGGCACGGGGCTTGGCTTACCTGCACGAGAAGTGCAGGGAGTGCATCATACACTGCGACGTCAAGCCGGAGAACATCCTCCTCGATCAGGAGATGGCGGCGAGGCTCGCGGACTTCGGCATGGCCAAGCTCGTCGGCCGCGACTTCAGCAGCGTCCTGACCACCATGCGGGGCACGGTGGGATACCTCGCGCCGGAGTGGCTAGCCGGCACGCC GGTCA CCGCAAAAGCCGACGTGTACAGCTTCGGGCTCCTGCTCTTCGAGCTCGTCTCGGGCCGGCGGAACAGCACCGCGCCGTCGTCGTCGTCGGAGGGCGGCCCTGGGATTTACTTCCCGGTTCATGCCGTGGTCAAGCTAAACGAAGGCGACGTGGCCGGGCTGGTCGACGAGAGGGTGGCCAAGGATGCCGACCCGAAGGAGGTTGAGAGACTCTGCAAGGTCGCGGGCTGGTGCATTCAAGACGAGGAAGGCGACCGGCCGACCATGGGGCTCGTCGTGCAGCAGCTCGAAGGCATCG CCAACGTAATGTTGCCGCCGATCCC TTCTCGGCTTCATATCCTGGCGATTGAGAACGAATGGGTCAGAGGTGTTCCAGGGGATGAGCGCTGCTCAAAGAGCGGTAGTAAACCAGAAACAGAAGCAATAGAAGAAATGTAGAACTGAAAAGAATCTGGGAGCACCCTACAGCTGAAGTGAAGATGCAGCGTCAGATATGAAAATGTAGTTGTAATGTCAGCATAGTTGATATTTCCCGTGTGGATGTATAGCCAGTACTGTACTGCAACTGTTCTGTAGATTCCTTAAATTCCGGAAACAGGATCAGACAAGTACCTTCTCTCG ]
[+] EMBL AK098871 [TTCAGCTACCGCGACCGGCTGCCGGGCGCCGTCGGCAACTTCATGCTGGACGTGAACGGGCAGATGCGGCGGCGGCAGTGGAGCGAGACGGCGGGGAAGTGGATCCTCTTCTGCTCGTTGCCCCACGACGCGTGCGACGTGTACGGCTCGTGCGGGCCCTTTGGAGTCTGCAGCAACGCCACCAACCCGGAGTGCCGGTGCCCCGCCGGCTTCGAGCCGCGGTCGTCGGAGGAGTGGAGGCTGGAGAACGCCGCCGGAGGCTGCGTGAGGCGGCACCCTCTCGAGTGTCACGGAGACGGGTTCCTGGCGCTGCCGTACACCGTGCGGCTCCCGAATGGCTCCGTGGAGGCGCCGGCCGGAGCTGGGAACGACAAGGCGTGCGCGCACACCTGCCTGGTCGACTGCTCCTGCACGGCCTACGTTCACGACGGAGCGAAGTGCCTCGTGTGGAACGGCGAGCTCGTCAACATGAAAGCCTACGCGGCTAATGAGAATGGCCAAGGCGATCCTGGCCTCGCCGGAGCGGTGCTTCACCTCCGTGTCGCCCACTCGGAGGTTCCGGCGTCGTCGACGGAGCACTCGTGGAAGAAATCGATGGTAATCCTTGGAAGCGTCGTTGCGGCGGTGGTGCTGCTCTTGGCGAGCCTCGTCACCGTGGTGGCGGTGGCGGCGGTGTTGCGGATGCGGCGTAGGAGGGGCAAGGTGACGGCGGTGCAGGGGTCGCTGCTGCTGCTCGACTACCATGCCGTGAAGACCGCGACGAGGGACTTCTCGGAGAAGCTCGGGAGCGGGAGCTTCGGCACGGTGTTCAAAGGCGCGCTGCCGGACGGGACGCCCGTGGCCGTCAAGAAGCTCGACGGTCTCCGGCAAGGCGAGAAGCAATTCAGAACGGAGGTGGTGACGCTCGGCATGATCCAGCACGTCAACCTCGTCGGACTCCGTGGCTTCTGCTGCGAGGGAAACAAGAGGGCGCTCGTGTACGACTACATGGCCAATGGCTCGCTGGACTCGCACCTGTTCGTCATGAGCGGCTCCAGCTCCGGCCCCGACTCCAAGCAGGTGACCCTGACTTGGAGCCAACGGTACAACGTCGCGGTTGGTGTGGCACGGGGCTTGGCTTACCTGCACGAGAAGTGCAGGGAGTGCATCATACACTGCGACGTCAAGCCGGAGAACATCCTCCTCGATCAGGAGATGGCGGCGAGGCTCGCGGACTTCGGCATGGCCAAGCTCGTCGGCCGCGACTTCAGCAGCGTCCTGACCACCATGCGGGGCACGGTGGGATACCTCGCGCCGGAGTGGCTAGCCGGCACGCC GGTCA CCGCAAAAGCCGACGTGTACAGCTTCGGGCTCCTGCTCTTCGAGCTCGTCTCGGGCCGGCGGAACAGCACCGCGCCGTCGTCGTCGTCGGAGGGCGGCCCTGGGATTTACTTCCCGGTTCATGCCGTGGTCAAGCTAAACGAAGGCGACGTGGCCGGGCTGGTCGACGAGAGGGTGGCCAAGGATGCCGACCCGAAGGAGGTTGAGAGACTCTGCAAGGTCGCGGGCTGGTGCATTCAAGACGAGGAAGGCGACCGGCCGACCATGGGGCTCGTCGTGCAGCAGCTCGAAGGCATCG CCAACGTAATGTTGCCGCCGATCCC TTCTCGGCTTCATATCCTGGCGATTGAGAACGAATGGGTCAGAGGTGTTCCAGAGGATGAGCGCTGCTCAAAGAGCGGTAGTAAACCAGAAACAGAAGCAATAGAAGAAATGTAGAACTGAAAAGAATCTGGGAGCACCCTACAGCTGAAGTGAAGATGCAGCGTCAGATATGAAAATGTAGTTGTAATGTCAGCATAGTTGATATTTCCCGTGTGGATGTATAGCCAGTACTGTACTGCAACTGTTCTGTAAATTCCTTAAATTCCGGAAACAGGATCAGACAAGTACCT ]
[-] EMBL AK067131 [ TCAGCTACCGCGACCGGCTGCCGGGCGCCGTCGGCAACTTCATGCTGGACGTGAACGGGCAGATGCGGCGGCGGCAGTGGAGCGAGACGGCGGGGAAGTGGATCCTCTTCTGCTCGTTGCCCCACGACGCGTGCGACGTGTACGGCTCGTGCGGGCCCTTTGGAGTCTGCAGCAACGCCACCAACCCGGAGTGCCGGTGCCCCGCCGGCTTCGAGCCGCGGTCGTCGGAGGAGTGGAGGCTGGAGAACGCCGCCGGAGGCTGCGTGAGGCGGCACCCTCTCGAGTGTCACGGAGACGGGTTCCTGGCGCTGCCGTACACCGTGCGGCTCCCGAATGGCTCCGTGGAGGCGCCGGCCGGAGCTGGGAACGACAAGGCGTGCGCGCACACCTGCCTGGTCGACTGCTCCTGCACGGCCTACGTTCACGACGGAGCGAAGTGCCTCGTGTGGAACGGCGAGCTCGTCAACATGAAAGCCTACGCGGCTAATGAGAACGGCCAAGGCGATCCTGGCCTCGCCGGAGCGGTGCTTCACCTCCGTGTCGCCCACTCGGAGGTTCCGGCGTCGTCGACGGAGCACTCGTGGAAGAAATCGATGGTAATCCTTGGAAGCGTCGTTGCGGCGGTGATGCTGCTCTTGGCGAGCCTCGTCACCGTGGTGGCGGTGGCGGCGGTGTTGCGGATGCGGCGTAGGAGGGGCAAGGTGACGGCGGTGCAGGGGTCGCTGCTGCTGCTCGACTACCATGCCGTGAAGACCGCGACGAGGGACTTCTCGGAGAAGCTCGGGAGCGGGAGCTTCGGCACGGTGTTCAAAGGCGCGCTGCCGGACGGGACGCCCGTGGCCGTCAAGAAGCTCGACGGTCTCCGGCAAGGCGAGAAGCAATTCAGAACGGAGGTGGTGACGCTCGGCATGATCCAGCACGTCAACCTCGTCCGACTCCGTGGCTTCTGCTGCGAGGGAAACAAGAGGGCGCTCGTGTACGACTACATGGCCAATGGCTCGCTGGACTCGCACCTGTTCGTCATGAGCGGCTCCAGCTCCGGCCCCGACTCCAAGCAGGTGACCCTGACTTGGAGCCAACGGTACAACGTCGCGGTTGGTGTGGCACGGGGCTTGGCTTACCTGCACGAGAAGTGCAGGGAGTGCATCATACACTGCGACGTCAAGCCGGAGAACATCCTCCTCGATCAGGAGATGGCGGCGAGGCTCGCGGACTTCGGCATGGCCAAGCTCGTCGGCCGCGACTTCAGCAGCGTCCTGACCACCATGCGGGGCACGGTGGGATACCTCGCGCCGGAGTGGCTAGCCGGCACGCC GGTCA CCGCAAAAGCCGACGTGTACAGCTTCGGGCTCCTGCTCTTCGAGCTCGTCTCGGGCCGGCGGAACAGCACCGCGCCGTCGTCGTCGTCGGAGGGCGGCCCTGGGATTTACTTCCCGGTTCATGCCGTGGTCAAGCTAAACGAAGGCGACGTGGCCGGGCTGGTCGACGAGAGGGTGGCCAAGGATGCCGACCCGAAGGAGGTTGAGAGACTCTGCAAGGTCGCGGGCTGGTGCATTCAAGACGAGGAAGGCGACCGGCCGACCATGGGGCTCGTCGTGCAGCAGCTCGAAGGCATC ]
[+] EMBL CB647951 [ GTCAACACGAAAGCCTACGCGGCTAATGAGAATGGCCAAGGCGATCCTGGCCTCGCCGGAGCGGTGCTTCACCTCCGTGTCGCCCACTCGGAGGTTCCGGCGTCGTCGACGGAGCACTCGTGGAAGAAATCGATGGTAATCCTTGGAAGCGTCGTTGCGGCGGTGGTGCTGCTCTTGGCGAGCCTCGTCACCGTGGTGGCGGTGGCGGCGGTGTTGCGGATGCGGCGTAGGAGGGGCAAGGTGACGGCGGTGCAGGGGTCGCTGCTGCTGCTCGACTACCATGCCGTGAAGACCGCGACGAGGGACTTCTCGGAGAAGCTCGGGAGCGGGAGCTTCGGCACGGTGTTCAAAGGCGCGCTGCCGGACGGGACGCCCGTGGCCGTCAAGAAGCTCGACGGTCTCCGGCAAGGCGAGAAGCAATTCAGAACGGAGGTGGTGACGCTCGGCATGATCCAGCACGTCAACCTCGTCCGACTCCGTGGCTTCTGCTGCGAGGGAAACAAGAGGGCGCTCGTGTACGACTACATGGCCAATGGCTCGCTGGACTCGCACCTGTTCGTCATGAGCGGCTCCAGCTCCGGCCCCGACTCCAAGCAGGTGACCCTGACTTGGAGCCAACGGTACAACGTCGCGGTTGGTGTGGCACGGGGCTTGGCTTACCTGCACGAGAAGTGCAGGGAGTGCATCATACACTGCGACGTCAAGCCGGAGAACATC ]
[+] EMBL CB655448 [ AGGTGCCTGCGGTGCAGGGGTCGCTGCTGCTGCTCGACTACCATGCCGTGAAGACCGCGACGAGGGACTTCTCGGAGAAGCTCGGGAGCGGGAGCTTCGGCACGGTGTTCAAAGGCGCGCTGCCGGACGGGACGCCCGTGGCCGTCAAGAAGCTCGACGGTCTCCGGCAAGGCGAGAAGCAATTCAGAACGGAGGTGGTGACGCTCGGCATGATCCAGCACGTCAACCTCGTCCGACTCCGTGGCTTCTGCTGCGAGGGAAACAAGAGGGCGCTCGTGTACGACTACATGGCCAATGGCTCGCTGGACTCGCACCTGTTCGTCATGAGCGGCTCCAGCTCCGGCCCCGACTCCAAGCAGGTGACCCTGACTTGGAGCCAACGGTACAACGTCGCGGTTGGTGTGGCACGGGGCTTGGCTTACCTGCACGAGAAGTGCAGGGAGTGCATCATACACTGCGACGTCAAGCCGGAGAACATCCTCCTCGATCAGGAGATGGCGGCGAGGCTCGCGGACTTCGGCATGGCCAAGCTCGTCGGCCGCGACTTCAGCAGCGTCCTGACCACCATGCGGGGCACGGTGGGATACCTCGCGCCGGAGTGGCTAGCCGGCACGCC GGTCACCCGCAAAAGCCGA ]
[+] EMBL AU065674 [ ACTCGCACCTGTTCGTCATGAGCGGCTCCAGCTCCGGCCCCGACTCCAAGCAGGTGACCCTGACTTGGAGCCAACGGTACAACGTCGCGGTTGGTGTGGCACGGGGCTTGGCTTACCTGCACGAGAAGTGCAGGGAGTGCATCATACACTGCGACGTCAAGCCGGAGAACATCCTCCTCGATCAGGAGATGGCGGCGAGGCTCGCGGACTTCGGCATGGCCAAGCTCGTCGGCCGCGACTTCAGCAGCGTCCTGACCACCATGCGGGGCACGGTGGGATACCTCGCGCCGGAGTGGCTAACCGGCACGCCGGGTCA CCGCAAAA CCGACGTGTAnaanttt ]
[-] EMBL CB647952 [ ACATCCTCCTCGATCAGGAGATGGCGGCGAGGCTCGCGGACTTCGGCATGGCCAAGCTCGTCGGCCGCGACTTCAGCAGCGTCCTGACCACCATGCGGGGCACGGTGGGATACCTCGCGCCGGAGTGGCTAGCCGGCACGCC GGTCA CCGCAAAAGCCGACGTGTACAGCTTCGGGCTCCTGCTCTTCGAGCTCGTCTCGGGCCGGCGGAACAGCACCGCGCCGTCGTCGTCGTCGGAGGGCGGCCCTGGGATTTACTTCCCGGTTCATGCCGTGGTCAAGCTAAACGAAGGCGACGTGGCCGGGCTGGTCGACGAGAGGGTGGCCAAGGATGCCGACCCGAAGGAGGTTGAGAGACTCTGCAAGGTCGCGGGCTGGTGCATTCAAGACGAGGAAGGCGACCGGCCGACCATGGGGCTCGTCGTGCAGCAGCTCGAAGGCATCG CCAACGTAATGTTGCCGCCGATCCC TTCTCGGCTTCATATCCTGGCGATTGAGAACGAATGGGTCAGAGGTGTTCCAGAGGATGAGCGCTGCTCAAAGAGCGGTAGTAAACCAGAAACAGAAGCAATAGAAGAAATGTAGAACTGAAAAGAATCTGGGAGCACCCTACAGCTGAAGTGAAGATGCAGCGTCAGATATGAAAATGTAGTTGTAATGTCAGCATAGTTGATATTTCCCGTGTGGATGTATAGCCAGTACTGTACTGCAACTGTTCTGTAAATTCCTTAAGTTCCGGAAACAGGATCAGACAAGTACCTTCTC ]
[-] EMBL CB655449 [ GCGGGGCACGGTGGGATACCTCGCGCCGGAGTGGCTAGCCGGCACGCC GGTCA CCGCAAAAGCCGACGTGTACAGCTTCGGGCTCCTGCTCTTCGAGCTCGTCTCGGGCCGGCGGAACAGCACCGCGCCGTCGTCGTCGTCGGAGGGCGGCCCTGGGATTTACTTCCCGGTTCATGCCGTGGTCAAGCTAAACGAAGGCGACGTGGCCGGGCTGGTCGACGAGAGGGTGGCCAAGGATGCCGACCCGAAGGAGGTTGAGAGACTCTGCAAGGTCGCGGGCTGGTGCATTCAAGACGAGGAAGGCGACCGGCCGACCATGGGGCTCGTCGTGCAGCAGCTCGAAGGCATCG CCAACGTAATGTTGCCGCCGATCCC TTCTCGGCTTCATATCCTGGCGATTGAGAACGAATGGGTCAGAGGTGTTCCAGAGGATGAGCGCTGCTCAAAGAGCGGTAGTAAACCAGAAACAGAAGCAATAGAAGAAATGTAGAACTGAAAAGAATCTGGGAGCACCCTACAGCTGAAGTGAAGATGCAGCGTCAGATATGAAAATGTAGTTGTAATGTCAGCATAGGTGATATTTCCCGTGTGGATGTATAGCCAGTACTGTACTGCAACTGTTCTGTAAATTCCTTGAATTCTGAAAGCAGGATCATACAAGCAC ]
[+] EMBL C22635 [ TCGCCCAACGTAATGTTGCCGCCGATCCCTTTTTCGGCTTCATATCCTGGCGATTGAGAACGAATGGGTCAGAGGTGTTCCAGAGGATGAGCGCTGCTCAAAGAGCGGTAGTAAACCAGAAACAGAAGCAATAGAAGAAATGTAGAACTGAAAAGAATCTGGGAGCACCCTACAGCTGAAGTGAAGATGCAGCGTCAGATATGAAAATGTAGTTGTAATGTCAGCATAGTTGATATTTCCCGTGTGGATGTATAGCCAGTACTGTACTGCAACTGTTCTGTAAATTCCTTAAATTCCGGAAACAGGATCAGACAAGTACNTTCTCTCGTTTTG ]
consensusID : consensus_14024#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 745 fasta sequence
[GCTCGTCGGCCGCGACTTCAGCAGCGTCCTGACCACCATGGGGGGCACGGTGGGATACCTCGCGCCGGAGTGGCTAGCCGGCACGCCGGTCACCGCAAAAGCCGACGTGTACAGCTTCGGGCTCCTGCTCTTCGAGCTCGTCTCGGGCCGGCGGAACAGCACCGCGCCGTCGTCCTCGTCGGAGGGCGGCCCTGGGATTTACTTCCCGGTTCATGCCGTGGTC-AAG-C-TAAA-CGAA-GGCGACGTGGCCGGGCTGGTCGACGAGAGGGTGGCCAAGGATGCCGACCCGAAGGAGGTTGAGAGACTCTGCAAGGTCGCGGGCTGGTGCATTCAAGACGAGGAAGGCGACCGGCCGACCATGGGGCTCGTCGTGCAGCAGCTCGAAGGCATCGCCAACGTAATGTTGCCGCCGATCCCTTCTCGGCTTCATATCCTGGCGATTGAGAACGAATGGGTCAGAGGTGTTCCA-GAGGATGAGCGCTGCTCAAAGAGCGGTAGTAAACCAGAAACAGAAGCAATAGAAGAAATGTAGAACTGAAAAGAATCTGGGAGCACCCTACAGCTGAAGTGAAGATGCAGCGTCAGATATGAAAATGTAGTTGTAATGTCAGCATAGTTGATATTTCCCGTGTGGATGTATAGCCAGTACTGTACTGCAACTGTTCTGTAAATTCCTTAAATTCCGGAAACAGGATCAGACAAGTACCTTCTCTCGTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[-] EMBL CB674586 [GCTCGTCGGCCGCGACTTCAGCAGCGTCCTGACCACCATGGGGGGCACGGTGGGATACCTCGCGCCGGAGTGGCTAGCCGGCACGCCGGTCACCGCAAAAGCCGACGTGTACAGCTTCGGGCTCCTGCTCTTCGAGCTCGTCTCGGGCCGGCGGAACAGCACCGCGCCGTCGTCCTCGTCGGAGGGCGGCCCTGGGATTTACTTCCCGGTTCATGCCGTGGTC AAG C TAAA CGAA GGCGACGTGGCCGGGCTGGTCGACGAGAGGGTGGCCAAGGATGCCGACCCGAAGGAGGTTGAGAGACTCTGCAAGGTCGCGGGCTGGTGCATTCAAGACGAGGAAGGCGACCGGCCGACCATGGGGCTCGTCGTGCAGCAGCTCGAAGGCATCGCCAACGTAATGTTGCCGCCGATCCCTTCTCGGCTTCATATCCTGGCGATTGAGAACGAATGGGTCAGAGGTGTTCCA GAGGATGAGCGCTGCTCAAAGAGCGGTAGTAAACCAGAAACAGAAGCAATAGAAGAAATGTAGAACTGAAAAGAATCTGGGAGCACCCTACAGCTGAAGTGAAGATGCAGCGTCAGATATGAAAATGTAGTTGTAATGTCAGCATAGTTGATATTTCCCGTGTGGATGTATAGCCAGTACTGTACTGCAACTGTTCTGTAAATTCCTTAAATTCCGGAAACGGGATCAGACAAGTACCTTCTCTCGTTTTAAAAAAAAggg ]
[+] EMBL AU030341 [ nCCNGCACGCCGTTCACCGCAAAAGCCGACGTGTACAGCTTCGGGCTCCT NTCTTCGAGCTCGTCTCGGGCCGGCGGAACAGCACCGCGCCGTCGTCGTCGTCGGAGGGCGGCCCTGGGATTTACTTCCCGGTTCATGCCGTGGTC AAG C TAAA CGAA GGCGACNTGGCCGGGCTGGTCGACGAGAGGGTGGCCAAGGATGCCGACCCGAAGGAGGTTGAGAGACTCTGCAAGGTCGCGGGCTGGTGCATTCAAGACGAGGAAGGCGACCGGCCGACCATGGGGCTCGTCGTGCAGCAGCTCGAAGGCATCGCCAACGTAATGTTGCCGCCGATCCCTTCTCGGCTTCATATCCTGGCGATTGAGAACGAATGGGTCAGAGGTGTTCCA GAGGATGAGCGCTGCTCAAAGAGCGGTAGTAAACCAGAAACAGAAGCAATAGAAGCAATGTAGAACTGAAAAGAATCTGGGAGCNCCCTACAGCTGAAGTGAAGATGCAGCGTCAGATATGAAAATGTAGTTGTAATGTCAGCATAGTTGATATTTCCCGTGTGGATGTATAGCCNGTNCTGTACTGCAACTGTTCTGTAAATTCCTTAAATTCCGGAAACAGGATCAGANAAGTNCCTTNTNTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL BI808347 [ GTTCAT CC TGTTCAAAGTCTTAAACCGAAGGGCGAC T GCC GGCTGGTCGACGAGA GGT GCCAAGGAT CCGACCCGAAGGAGGTTGAGAGACTCTGCAAGGTC CGGGCTGGT CATTCAAGACGAGGAAGGCGACC GCCGACCAT GGGCTCTTCGTGCAGCAGCTCGAAGGCATCGCCGACGTAATGTTGCC CCGATCCCTTCTCGGCTTCATATCCTGGCGATTGAGAACGAATGGGTCAGAGGTGTTCCACGAGGATGAGC CTGCTCAAAGA CGGTAGTAAACCAGAAACAGAAGC ATAGAAGAAATGTAGAACTGAAAAGAATCTGGGAGCACCCTACAGCTGAAGTGAAGATGCAGCGTCAGATATGAAAATGTAGTTGTAATGTCAGCATAGTTGATATTTCCCGTGTGGATGTATAGCCAGTACTGTACGGCAACTGTTCTGTAAATTCCTTAAATTCTGGAAACAGGATCAGACAAGTACCTTCTCTCGTTTTGTTCCAAAAAAAAAA ]
[+] EMBL BI809988 [ TCGACGAGAGGGTGCCCAAGGAT CCGACCCGAAGGA GTTGAGAGACTCTGCAA GTC CGGGCTGGTGCATTCAAGACGAGGAAGGCGACCGGCCGACCATGGGGCTCGTCGTGCA CAGCTCGAAGGCATCGCCGACGTAATGTTGCC CCGATCCCTTCTCGGCTTCATATCCTGGCGATTGAGAACGAATGGGTCAGAGGTGTTCCA GAGGATGAGCGCTGCTCAAAGAGCGGTAGTAAACCAGAAACAGAAGCCATAGAAGAAATGTAGAACTGAAAAGAATCTGGGAGCACCCTACAGCTGAAGTGAAGATGCAGCGTCAGATATGAAAATGTAGTTGTAATGTCAGCATAGTTGATATTTCCCGTGTGGATGTATAGCCAGTACTGTACGGCAACTGTTCTGTAAATTCCTTAAATTCTGGAAACAGGATCAGACAAGTACCTTCTCTCGTTTAAAAAAAAAA ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_14024#0 TTCAGCTACCGCGACCGGCTGCCGGGCGCCGTCGGCAACTTCATGCTGGACGTGAACGGG 60
consensus_14024#1 ------------------------------------------------------------
consensus_14024#0 CAGATGCGGCGGCGGCAGTGGAGCGAGACGGCGGGGAAGTGGATCCTCTTCTGCTCGTTG 120
consensus_14024#1 ------------------------------------------------------------
consensus_14024#0 CCCCACGACGCGTGCGACGTGTACGGCTCGTGCGGGCCCTTTGGAGTCTGCAGCAACGCC 180
consensus_14024#1 ------------------------------------------------------------
consensus_14024#0 ACCAACCCGGAGTGCCGGTGCCCCGCCGGCTTCGAGCCGCGGTCGTCGGAGGAGTGGAGG 240
consensus_14024#1 ------------------------------------------------------------
consensus_14024#0 CTGGAGAACGCCGCCGGAGGCTGCGTGAGGCGGCACCCTCTCGAGTGTCACGGAGACGGG 300
consensus_14024#1 ------------------------------------------------------------
consensus_14024#0 TTCCTGGCGCTGCCGTACACCGTGCGGCTCCCGAATGGCTCCGTGGAGGCGCCGGCCGGA 360
consensus_14024#1 ------------------------------------------------------------
consensus_14024#0 GCTGGGAACGACAAGGCGTGCGCGCACACCTGCCTGGTCGACTGCTCCTGCACGGCCTAC 420
consensus_14024#1 ------------------------------------------------------------
consensus_14024#0 GTTCACGACGGAGCGAAGTGCCTCGTGTGGAACGGCGAGCTCGTCAACATGAAAGCCTAC 480
consensus_14024#1 ------------------------------------------------------------
consensus_14024#0 GCGGCTAATGAGAATGGCCAAGGCGATCCTGGCCTCGCCGGAGCGGTGCTTCACCTCCGT 540
consensus_14024#1 ------------------------------------------------------------
consensus_14024#0 GTCGCCCACTCGGAGGTTCCGGCGTCGTCGACGGAGCACTCGTGGAAGAAATCGATGGTA 600
consensus_14024#1 ------------------------------------------------------------
consensus_14024#0 ATCCTTGGAAGCGTCGTTGCGGCGGTGGTGCTGCTCTTGGCGAGCCTCGTCACCGTGGTG 660
consensus_14024#1 ------------------------------------------------------------
consensus_14024#0 GCGGTGGCGGCGGTGTTGCGGATGCGGCGTAGGAGGGGCAAGGTGACGGCGGTGCAGGGG 720
consensus_14024#1 ------------------------------------------------------------
consensus_14024#0 TCGCTGCTGCTGCTCGACTACCATGCCGTGAAGACCGCGACGAGGGACTTCTCGGAGAAG 780
consensus_14024#1 ------------------------------------------------------------
consensus_14024#0 CTCGGGAGCGGGAGCTTCGGCACGGTGTTCAAAGGCGCGCTGCCGGACGGGACGCCCGTG 840
consensus_14024#1 ------------------------------------------------------------
consensus_14024#0 GCCGTCAAGAAGCTCGACGGTCTCCGGCAAGGCGAGAAGCAATTCAGAACGGAGGTGGTG 900
consensus_14024#1 ------------------------------------------------------------
consensus_14024#0 ACGCTCGGCATGATCCAGCACGTCAACCTCGTCCGACTCCGTGGCTTCTGCTGCGAGGGA 960
consensus_14024#1 ------------------------------------------------------------
consensus_14024#0 AACAAGAGGGCGCTCGTGTACGACTACATGGCCAATGGCTCGCTGGACTCGCACCTGTTC 1020
consensus_14024#1 ------------------------------------------------------------
consensus_14024#0 GTCATGAGCGGCTCCAGCTCCGGCCCCGACTCCAAGCAGGTGACCCTGACTTGGAGCCAA 1080
consensus_14024#1 ------------------------------------------------------------
consensus_14024#0 CGGTACAACGTCGCGGTTGGTGTGGCACGGGGCTTGGCTTACCTGCACGAGAAGTGCAGG 1140
consensus_14024#1 ------------------------------------------------------------
consensus_14024#0 GAGTGCATCATACACTGCGACGTCAAGCCGGAGAACATCCTCCTCGATCAGGAGATGGCG 1200
consensus_14024#1 ------------------------------------------------------------
consensus_14024#0 GCGAGGCTCGCGGACTTCGGCATGGCCAAGCTCGTCGGCCGCGACTTCAGCAGCGTCCTG 1260
consensus_14024#1 -----------------------------GCTCGTCGGCCGCGACTTCAGCAGCGTCCTG 31
*******************************
consensus_14024#0 ACCACCATGCGGGGCACGGTGGGATACCTCGCGCCGGAGTGGCTAGCCGGCACGCCGGTC 1320
consensus_14024#1 ACCACCATGGGGGGCACGGTGGGATACCTCGCGCCGGAGTGGCTAGCCGGCACGCCGGTC 91
********* **************************************************
consensus_14024#0 ACCGCAAAAGCCGACGTGTACAGCTTCGGGCTCCTGCTCTTCGAGCTCGTCTCGGGCCGG 1380
consensus_14024#1 ACCGCAAAAGCCGACGTGTACAGCTTCGGGCTCCTGCTCTTCGAGCTCGTCTCGGGCCGG 151
************************************************************
consensus_14024#0 CGGAACAGCACCGCGCCGTCGTCGTCGTCGGAGGGCGGCCCTGGGATTTACTTCCCGGTT 1440
consensus_14024#1 CGGAACAGCACCGCGCCGTCGTCCTCGTCGGAGGGCGGCCCTGGGATTTACTTCCCGGTT 211
*********************** ************************************
consensus_14024#0 CATGCCGTGGTCAAGCTAAACGAAGGCGACGTGGCCGGGCTGGTCGACGAGAGGGTGGCC 1500
consensus_14024#1 CATGCCGTGGTCAAGCTAAACGAAGGCGACGTGGCCGGGCTGGTCGACGAGAGGGTGGCC 271
************************************************************
consensus_14024#0 AAGGATGCCGACCCGAAGGAGGTTGAGAGACTCTGCAAGGTCGCGGGCTGGTGCATTCAA 1560
consensus_14024#1 AAGGATGCCGACCCGAAGGAGGTTGAGAGACTCTGCAAGGTCGCGGGCTGGTGCATTCAA 331
************************************************************
consensus_14024#0 GACGAGGAAGGCGACCGGCCGACCATGGGGCTCGTCGTGCAGCAGCTCGAAGGCATCGCC 1620
consensus_14024#1 GACGAGGAAGGCGACCGGCCGACCATGGGGCTCGTCGTGCAGCAGCTCGAAGGCATCGCC 391
************************************************************
consensus_14024#0 AACGTAATGTTGCCGCCGATCCCTTCTCGGCTTCATATCCTGGCGATTGAGAACGAATGG 1680
consensus_14024#1 AACGTAATGTTGCCGCCGATCCCTTCTCGGCTTCATATCCTGGCGATTGAGAACGAATGG 451
************************************************************
consensus_14024#0 GTCAGAGGTGTTCCAGAGGATGAGCGCTGCTCAAAGAGCGGTAGTAAACCAGAAACAGAA 1740
consensus_14024#1 GTCAGAGGTGTTCCAGAGGATGAGCGCTGCTCAAAGAGCGGTAGTAAACCAGAAACAGAA 511
************************************************************
consensus_14024#0 GCAATAGAAGAAATGTAGAACTGAAAAGAATCTGGGAGCACCCTACAGCTGAAGTGAAGA 1800
consensus_14024#1 GCAATAGAAGAAATGTAGAACTGAAAAGAATCTGGGAGCACCCTACAGCTGAAGTGAAGA 571
************************************************************
consensus_14024#0 TGCAGCGTCAGATATGAAAATGTAGTTGTAATGTCAGCATAGTTGATATTTCCCGTGTGG 1860
consensus_14024#1 TGCAGCGTCAGATATGAAAATGTAGTTGTAATGTCAGCATAGTTGATATTTCCCGTGTGG 631
************************************************************
consensus_14024#0 ATGTATAGCCAGTACTGTACTGCAACTGTTCTGTAAATTCCTTAAATTCCGGAAACAGGA 1920
consensus_14024#1 ATGTATAGCCAGTACTGTACTGCAACTGTTCTGTAAATTCCTTAAATTCCGGAAACAGGA 691
************************************************************
consensus_14024#0 TCAGACAAGTACCTTCTCTCGTTTTGTTCCCATCTAATTCTGGTCCATCCTTGCTGACAG 1980
consensus_14024#1 TCAGACAAGTACCTTCTCTCGTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAA------ 745
************************* * ** *
consensus_14024#0 CTGCACCTTTATTGAAGAAATC 2002
consensus_14024#1 ----------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||