cluster # 14025

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Oryza sativa
cluster # 14025 cluster # 14025 Sequences # 14 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_14025#0 length = 1842 sequences # 13

consensus_14025#1 length = 789 sequences # 1

consensusID : consensus_14025#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 13
consensus length = 1842
fasta sequence

                              [CGGCAACGTCTTACCAGCTCGGAGCTCTCTCGCTTGCTGCCTCTTCTCTTCTTCCTCCCGCCACCGACACCACCTCCACCAGCAGCTTCGCCTTCGCCGCGTCGGCATCTGCAGTTGCCACTTCGCTTTCTTCCACTCCCTCCTCCTCCTCGCTTACCTCACACTCCTCCCCCCCAATTTCATCCCCCACCCACCACCAGATCCCCCACCACCTGCCGCATTCTCCCCCCCAAGATCCAGATCGCCGGTCACCCCCACGAACTCGCTCGAGATCCAGAGAGAGAGAGAGAGGCAGTTTCTTGGTTGATTTTCGAGGATGAAGAGGAAGACTCGGAACAAGATAATCCTGACGACGCTGCTGGTGTCGGCGGCGGCGATCCTGATCGGCGGGACGGTGGCGCTGATCCTGACGGCGGGGACATGGAAGGTGAAGATGAAGGAGTCGCGCGAGAAGATCTGCGACAAGGGGTGGGAGTGCTCGGGTAGCAAGTACTGCTGCAACGACACCATCACCGACTTCTTCAAGGTGTACCAGTTCGAGAACCTCTTCTCCAAGCGCAACAGCCCCGTCGCCCACGCCGTCGGCTTCTGGGACTACCAGTCCTTCATCACCGCCGCCGCCCTCTTCGAGCCCCTCGGCTTCTGCACCACCGGCGGCAAGCAGATGCAGATGATGGAGCTCTGCGCCTTCCTCGGCCATGTCGGCTCCAAGACCTCATGTGGATTTGGTGTGGCGACCGGCGGGCCGACGGCGTGGGGGCTCTGCTACAACCACGAGATGAGCCCTAAGGAGGATTACTGCGACAAGACGAACCTGCAGTATCCCTGCGTCGAGGGCGCCGAGTACTACGGCCGCGGCGCCATCCCCGTCTTCTGGAACTACAACTATGGCGCGGCGGGCGACGGGATACACGAGGACC-TGCTCCACCACCCGGAGTACCTGGAGCAGAACGCGACGATGGCGTTCATGGCGGCGATGTGGCGGTGGATGACGCCGATGAAGAAGAAGCAGCCGTCGGCGCACGACGTGTTCGTGGGCAACTGGAAGCCCACCAAGAACGACACGCTCGCCAAGCGCCTCCCCGGGTTCGGCGCCACCATGAACGTGCTCTACGGCGACCAGATCTGCGGCAAGGGCTACATCGACGACATGAACGTCATCATCTCGCACTACCAGTACTACCTCGACCTCATGGGCGTCGGCCGCGAGCACTCCGGCGACAACCGCGACTGCGCCGAG-CAGGCCGCCTTCAACCCCTCCTACA-AGAAGCCCGACGATCAGCAGCAACAAAGCTAGAACAGATC-ACCCCCAATTCCCCCCAA-TTCCA-CGGTAAAGAATTCACCCAATGTGTTGTTGTATACATCTTCTTGCTACTGCAATCGCTATTGCCAATGCAAACCAACCA-TTGCCA-TTGCTGTTGCCTCGTGAGCTATACAGATTAACGGATTCTTCATCAGTGTGAGGAGCTGTGGTTTGCATTGGTGTATTTCTGAGTAGCGGATTTTGAGGGAAGTGTCAACTGTGTGTGTGATGCCTATGGGATTTGGGAAATTTGTTGTAGCCCTTGTTGTACCATAGTGTACATTTTCATTCCATTTGATTTTTGTCACATATACATGTTT---AAAGAGGAGGATTCAGGATAAACATACCATGATTTTGATGAAAAAAAAATGTATCTGTTATTGAGGTGTGTGTAGCTGTTTAGCATGCATGCAATAGTTTTCATGCATCAGTGCGTGATAATGCTGTGTGTCATAATTTGGGCTGGGTAAAAATACTCAGTCCTCAGTTACTTCTCGCTATTGATCTTTCAGCTTTGATCAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK103755             [CGGCAACGTCTTACCAGCTCGGAGCTCTCTCGCTTGCTGCCTCTTCTCTTCTTCCTCCCGCCACCGACACCACCTCCACCAGCAGCTTCGCCTTCGCCGCGTCGGCATCTGCAGTTGCCACTTCGCTTTCTTCCACTCCCTCCTCCTCCTCGCTTACCTCACACTCCTCCCCCCCAATTTCATCCCCCACCCACCACCAGATCCCCCACCACCTGCCGCATTCTCCCCCCCAAGATCCAGATCGCCGGTCACCCCCACGAACTCGCTCGAGATCCAGAGAGAGAGAGAGAGGCAGTTTCTTGGTTGATTTTCGAGGATGAAGAGGAAGACTCGGAACAAGATAATCCTGACGACGCTGCTGGTGTCGGCGGCGGCGATCCTGATCGGCGGGACGGTGGCGCTGATCCTGACGGCGGGGACATGGAAGGTGAAGATGAAGGAGTCGCGCGAGAAGATCTGCGACAAGGGGTGGGAGTGCTCGGGTAGCAAGTACTGCTGCAACGACACCATCACCGACTTCTTCAAGGTGTACCAGTTCGAGAACCTCTTCTCCAAGCGCAACAGCCCCGTCGCCCACGCCGTCGGCTTCTGGGACTACCAGTCCTTCATCACCGCCGCCGCCCTCTTCGAGCCCCTCGGCTTCTGCACCACCGGCGGCAAGCAGATGCAGATGATGGAGCTCTGCGCCTTCCTCGGCCATGTCGGCTCCAAGACCTCATGTGGATTTGGTGTGGCGACCGGCGGGCCGACGGCGTGGGGGCTCTGCTACAACCACGAGATGAGCCCTAAGGAGGATTACTGCGACAAGACGAACCTGCAGTATCCCTGCGTCGAGGGCGCCGAGTACTACGGCCGCGGCGCCATCCCCGTCTTCTGGAACTACAACTATGGCGCGGCGGGCGACGGGATACACGAGGACC TGCTCCACCACCCGGAGTACCTGGAGCAGAACGCGACGATGGCGTTCATGGCGGCGATGTGGCGGTGGATGACGCCGATGAAGAAGAAGCAGCCGTCGGCGCACGACGTGTTCGTGGGCAACTGGAAGCCCACCAAGAACGACACGCTCGCCAAGCGCCTCCCCGGGTTCGGCGCCACCATGAACGTGCACTACGGCGACCAGATCTGCGGCAAGGGCTACATCGACGACATGAACGTCATCATCTCGCACTACCAGTACTACCTCGACCTCATGGGCGTCGGCCGCGAGCACTCCGGCGACAACCGCGACTGCGCCGAG CAGGCCGCCTTCAACCCCTCCTACA AGAAGCCCGACGATCAGCAGCAACAAAGCTAGAACAGATC ACCCCCAATTCCCCCCAA TTCCA CGGTAAAGAATTCACCCAATGTGTTGTTGTATACATCTTCTTGCTACTGCAATCGCTATTGCCAATGCAAACCAACCA TTGCCA TTGCTGTTGCCTCGTGAGCTATACAGATTAACGGATTCTTCATCAGTGTGAGGAGCTGTGGTTTGCATTGGTGTATTTCTGAGTAGCGGATTTTGAGGGAAGTGTCAACTGTGTGTGTGATGCCTATGGGATTTGGGAAATTTGTTGTAGCCCTTGTTGTACCATAGTGTACATTTTCATTCCATTTGATTTTTGTCACATATACATGTTT   AAAGAGG                                                                                                                                                                                                                    ]
[+] EMBL AK069564             [                                                                                                                                                                                                                         GCATTCTCCCCCCCAAGATCCAGATCGCCGGTCACCCCCACGAACTCGCTCGAGATCCAGAGAGAGAGAGAGAGGCAGTTTCTTGGTTGATTTTCGAGGATGAAGAGGAAGACTCGGAACAAGATAATCCTGACGACGCTGCTGGTGTCGGCGGCGGCGATCCTGATCGGCGGGACGGTGGCGCTGATCCTGACGGCGGGGACATGGAAGGTGAAGATGAAGGAGTCGCGCGAGAAGATCTGCGACAAGGGGTGGGAGTGCTCGGGTAGCAAGTACTGCTGCAACGACACCATCACCGACTTCTTCAAGGTGTACCAGTTCGAGAACCTCTTCTCCAAGCGCAACAGCCCCGTCGCCCACGCCGTCGGCTTCTGGGACTACCAGTCCTTCATCACCGCCGCCGCCCTCTTCGAGCCCCTCGGCTTCTGCACCACCGGCGGCAAGCAGATGCAGATGATGGAGCTCTGCGCCTTCCTCGGCCATGTCGGCTCCAAGACCTCATGTGGATTTGGTGTGGCGACCGGCGGGCCGACGGCGTGGGGGCTCTGCTACAACCACGAGATGAGCCCTAAGGAGGATTACTGCGACAAGACGAACCTGCAGTATCCCTGCGTCGAGGGCGCCGAGTACTACGGCCGCGGCGCCATCCCCGTCTTCTGGAACTACAACTATGGCGCGGCGGGCGACGGGATACACGAGGACC TGCTCCACCACCCGGAGTACCTGGAGCAGAACGCGACGATGGCGTTCATGGCGGCGATGTGGCGGTGGGTGACGCCGATGAAGAAGAAGCAGCCGTCGGCGCACGACGTGTTCGTGGGCAACTGGAAGCCCACCAAGAACGACACGCTCGCCAAGCGCCTCCCCGGGTTCGGCGCCACCATGAACGTGCTCTACGGCGACCAGATCTGCGGCAAGGGCTACATCGACGACATGAACGTCATCATCTCGCACTACCAGTACTACCTCGACCTCATGGGCGTCGGCCGCGAGCACTCCGGCGACAACCGCGACTGCGCCGAG CAGGCCGCCTTCAACCCCTCCTACA AGAAGCCCGACGATCAGCAGCAACAAAGCTAGAACAGATC ACCCCCAATTCCCCCCAA TTCCA CGGTAAAGAATTCACCCAATGTGTTGTTGTATACATCTTCTTGCTACTGCAATCGCTATTGCCAATGCAAACCAACCA TTGCCA TTGCTGTTGCCTCGTGAGCTATACAGATTAACGGATTCTTCATCAGTGTGAGGAGCTGTGGTTTGCATTGGTGTATTTCTGAGTAGCGGATTTTGAGGGAAGTGTCAACTGTGTGTGTGATGCCTATGGGATTTGGGAAATTTGTTGTAGCCCTTGTTGTACCATAGTGTACATTTTCATTCCATTTGATTTTTGTCACATATACATGTTT   AAAGAGGAGGATTCAGGATAAACATACCAT                                                                                                                                                                                             ]
[+] EMBL C72113               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GGCGGCAAGCAGATGCAGATGATGGAGCTCTGCGCCTTCCTCGGCCATGTCGGCTCCAAGACCTCATGTGGATTTGGTGTGGCGACCGGCGGGCCGACGGCGTGGGGGCTCTGCTACAACCACGAGATGAGCCCTAAGGAGGATTACTGCGACAAGACGAACCTGCAGTATCCCTGCGTCGAGGGCGCCGAGTACTACGGCCGCGGCGCCATCCCCGTCTTCTGGAACTACAACTATGGCGCGGCGGGCGACGGGATACACGAGGACCTTGCTCCACCACCCGGAGTACCTGGAGCAGAACGCGACGATGGCGTTCATGGCGGCGATGTGGCGGTGGATGACGCCNATGAAGAAGAAGCAG CGTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CB680440             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ACCTGGAGCAGAACGCGACGATGGCGTTCATGGCGGCGATGTGGCGGTGGATGACGCCGATGAAGAAGAAGCAGCCGTCGGCGCACGACGTGTTCGTGGGCAACTGGAAGCCCACCAAGAATGACACGCTCGCCAAGCGCCTCCCCGGGTTTGGCGCCACCATGAACGTGCTCTACGGCGACCAGATCTGCGGCAAGGGCTACATCGACGACATGAATGTCATCATCTCGCACTACCAGTACTACCTCGACCTCATGGGCGTCGGCCGCGAGCACTCCGGCGACAACCGCGACTGCGCCGAG CAGGCCGCCTTCAACCCCTCCTACA AGAAGCCCGACGATCAGCAGCAACAAAGCTAGAACAGATC ACCCCCAATTCCCCCCAA TTCCA CGGTAAAGAATTCACCCAATGTGTTGTTGTATACATCTTCTTGCTACTGCAATCGCTATTGCCAATGCAAACCAACCA TTGCCA TTGCTGTTGCCTCGTGAGCTATACAGATTAACGGATTCTTCATCAGTGTGAGGAGCTGTGGTTTGCATTGGTGTATTTTTGAGTAGCGGATTTTGAGGGAAGTGTCAACTGTGTGTGTGATGCCTATGGGATTTGGGAAATTGGGTGTAGCCCTTGTTGTACCATAGTGTACATTTTCATTCCATTTGATTTTTGTCACATATACATGTTTTTAAAAGAG                                                                                                                                                                                                                     ]
[-] EMBL CB652614             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TCATGGCGGCGATGTGGCGGTGGATGACGCCGATGAAGAAGAAGCAGCCGTCGGCGCACGACGTGTTCGTGGGCAACTGGAAGCCCACCAAGAACGACACGCTCGCCAAGCGCCTCCCCGGGTTCGGCGCCACCATGAACGTGCTCTACGGCGACCAGATCTGCGGCAAGGGCTACATCGACGACATGAACGTCATCATCTCGCACTACCAGTACTACCTCGACCTCATGGGCGTCGGCCGCGAGCACTCCGGCGACAACCGCGACTGCGCCGAG CAGGCCGCCTTCAACCCCTCCTACA AGAAGCCCGACGATCAGCAGCAACAAAGCTAGAACAGATC ACCCCCAATTCCCCCCAA TTCCA CGGTAAAGAATTCACCCAATGTGTTGTTGTATACATCTTCTTGCTACTGCAATCGCTATTGCCAATGCAAACCAACCA TTGCCA TTGCTGTTGCCTCGTGAGCTATACAGATTAACGGATTCTTCATCAGTGTGAGGAGCTGTGGTTTGCATTGGTGTATTTCTGAGTAGCGGATTTTGAGGGAAGTGTCAACTGTGTGTGTGATGCCTATGGGATTTGGGAAATTTGTTGTAGCCCTTGTTGTACCATAGTGTACATTTTCATTCCATTTGATTTTTGTCACATATACATGTTT   AAAGAGGAGGATTCAGGATAAACATACCATGATTTTGATGAGCTTGCTGTGTATCTGTTATTGAGGTGTGTGTAGCTGTTTAGCATGCATGCAATAGTTTTCATGCATCAGTGCGTGATA                                                                                                   ]
[+] EMBL CB000285             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TCATCATCTCGCACTACCAGTACTACCTCGACCTTATGGGCGTCGGCCGCGAGCACTCCGGCGACAACCGCGACTGCGCCGAG CAGGCCGCCTTCAACCCCTCCTACA AGAAGCCCGACGATCAGCAGCAACAAAGCTAGAACAGATC ACCCCCAATTCCCCCCAA TTCCA CGGTAAAGAATTCACCCAATGTGTTGTTGTATACATCTTCTTGCTACTGCAATCGCTATTGCCAATGCAAACCAACCA TTGCCA TTGCTGTTGCCTCGTGAGCTATACAGATTAACGGATTCTTCATCAGTGTGAGGAGCTGTGGTTTGCATTGGTGTATTTCTGAGTAGCGGATTTTGAGGGAAGTGTCAACTGTGTGTGTGATGCCTATGGGATTTGGGAAATTTGTTGTAGCCCTTGTTGTACCATAGTGTACATTTTCATTCCATTTGATTTTTGTCACATATACATGTTT   AAAGAGGAGGATTCAGGATAAACATACCATGATTTTGATGAAAAAAAAAaa                                                                                                                                                                        ]
[+] EMBL BM421098             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CGGCCGCGAGCACTCCGGCGACAACCGCGACTGCGCCGAGCCAGGCCGCCTTCAACCCCTCCTACANAGAAGCCCGACGATCAGCAGCAAC AAGCTAGAACAGATC ACCCCCAATTCCCCCCAAGTTCCACCGGTAAAGAATTCACCCAATGTGTTGTTGTATACATCTTCTTGCTACTGCAATCGCCATTGCCAATGCAAACCAACCACTTGCCACTTGCTGTTGCCTCGTGAGCTATACAGATTAACGGATTCTTCATCAGTGTGAGGAGCTGTGGTTTGCATTGGTGTATTTCTGAGTAGCGGATTTTGAGGGAAGTGTCAACTGTGTGTGTGATGCCTATGGGATTTGGGAAATTTGTTGTAGCCCTTGTTGTACCATAGTGTACATTTTCATTCCATTTGATTTTTGTCACATATACATGTTT   AAAGAGGAGGATTCAGGATAAACATACCATGATTTTGA  AAAAAAAAA                                                                                                                                                                          ]
[+] EMBL BE229950             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GCGACTGCGCCGAG CAGGCCGCCTTCAACCCCTCCTACA AGAAGCCCGACGATCAGCATCAACAAAGCTAGAACAGATC ACCCCCAATTCCCCCCAA TTCCA CGGTAAAGAATTCACCCAATGTGTTGTTGTATACATCTTCTTGCTACTGCAATCGCCATTGCCAATGCAAACCAACCA TTGCCA TTGCTGTTGCCTCGTGAGCTATACACATTAACGGATTCTTCATCAGTGTGAGGAGCTGCGGTTTGCATTGGTGTATTTCTGAGTAGCGGATTTTGAGGGAAGTGTCAACTGCCTGTGTGATGCCTATGGGATTTGGGAAATTTGTTGTAGCCCTTG                                                                                                                                                                                                                                                                                     ]
[-] EMBL OS37968              [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       AG AAGG CGCC TCAA CCCTCCT CA AGAAGGCCGCCG TCAGCAGCAACAAAGCTAGAACAGATC ACCCCCAA TCCCCCCAA TTCCA CGGTAAAGAATTCACCCAATGTGGTGTTGTATACATCCTCTTGCTACTGCAATCGCCATTGCCAATGCAAACCAACCA TTGCCA TTGCTGTTGCCRCGTGAGCTATACAGATTAACGGATTCTTCATCAGTGTGAGGAGCTGTGGTTTGCATTGGTGTATTTCTGAGTAGCGGATTTTGAGGGAAGTGTCAACTGTGTGTGTGATGCCTATGGGATTTGGGAAATTTGTTGTAGCCCTTGTTGTACCATAGTGTACATTTTCATTCCATTTGATTTTTGTCACATATACATGTTT   AAAGAGGAGGATTCA                                                                                                                                                                                                            ]
[+] EMBL AU093875             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       aaCCCGACGATCAGCAGCAACAAAGCTAGAACAGATC ACCCCCAATTCCCCCNAA TTCCA CGGTAAAGAATTCNCCCAATGTGTTGTTGTANACATCTTCTTGCTACTGCAATCGCTATTGCCAATGCAAACCAACCA TTGCCA TTGCTGTTGCCTCGTGAGCTATACAGATTAACGGATTCTTCATCAGTGTGAGGAGCTGTGGTTTGCATTGGTGTATTTCTGAGTAGCGGATTTTGAGGGAAGTGTCAACTGTGTGTGTGATGCCTATGGGATTTGGGAAATTTGTTGTAGCCCTTGTTGTACCATAGTGTACATTTTCATTCCATTTGATTTTTGTCACATATACATGTTT   AAAGAGGAGGATTCAGGATAAACATACCATGATTTTGATGAGCTTGCTGTGTATCTGTTATTGAGGTGTGTGTAGCTGTTTAGCATGCATGCAATAGTTTTCATGCATCAGTGCGTGATAATGCTGTGTGTCATAATTTGGGCTGGGTAAAAATACTCAGTCCTCAGTTACTTCTCGCTATTGATCTTTCAGCTTTGATCAAAAAAAAAAAAAAAAAAA]
[+] EMBL AU222628             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ACGATCAGCAGCAACAAAGCTAGAACAGATCNCCCCCCAATTCCCCCCAA TTNCA CGGTAAAGAATTCACCCAATGTGTTGTTGTATACATCTTCTTGCTACTGCAATCGCTATTGCCAATGCAAACCAACCA TTGCCA TTGNTGTTGCCTCGTGAGCTATACAGATTAACGGATTNTTCATCAGTGTGAGGAGCTGTGGTTTGCATTGGNGTATTTTTGAGTAGCGGATTTTGAGGGAAGTGTCAACTGTGTGTGTGATGCCTATGGGATTTGGGAAATTTGTTGTAGCCCTTGTTGTACCATAGTGTACATTTTCATTCCATTTGATTTTTGTCACATATACATGTTT   AAAGAGGAGGATTCAGGATAAACATACCATGATTTTGATGAAAAAAA                                                                                                                                                                            ]
[+] EMBL AU108341             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ATCGCTATTGCCAATGCAAACCAACCA TTGCCA TTGCTGTTGCCTCGTGAGCTATACAGATTAACGGATTCTTCATCAGTGTGAGGAGCTGTGGTTTGCATTGGTGTATTTCTGAGTAGCGGATTTTGAGGGAAGTGTCAACTGTGTGTGTGATGCCTATGGGATTTGGGAAATTTGTTGTAGCCCTTGTTGTACCATAGTGTACATTTTCATTCCATTTGATTTTTGTCACATATACATGTTT   AAAGAGGAGGATTCAGGATAAACATACCATGATTTTGATGAAAAAAAAA                                                                                                                                                                          ]
[+] EMBL AU066095             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ATCGCTATTGCCAATGCAAACCAACCA TTGCCA TTGCTGTTGCCTCGTGAGCTATACAGATTAACGGATTCTTCATCAGTGTGAGGAGCTGTGGTTTGCATTGGTGTATTTCTGAGTAGCGGATTTTGAGGGAAGTGTCAACTGTGTGTGTGATGCCTATGGGATTTGGGAAATTTGTTGTAGCCCTTGTTGTACCATAGTGTACATTTTCATTCCATTTGATTTTTGTCACATATACATGTTT   AAAGAGGAGGATTCAGGATAAACATACCATGATTTTGATGA                                                                                                                                                                                  ]




>consensus_14025#0
CGGCAACGTCTTACCAGCTCGGAGCTCTCTCGCTTGCTGCCTCTTCTCTTCTTCCTCCCG
CCACCGACACCACCTCCACCAGCAGCTTCGCCTTCGCCGCGTCGGCATCTGCAGTTGCCA
CTTCGCTTTCTTCCACTCCCTCCTCCTCCTCGCTTACCTCACACTCCTCCCCCCCAATTT
CATCCCCCACCCACCACCAGATCCCCCACCACCTGCCGCATTCTCCCCCCCAAGATCCAG
ATCGCCGGTCACCCCCACGAACTCGCTCGAGATCCAGAGAGAGAGAGAGAGGCAGTTTCT
TGGTTGATTTTCGAGGATGAAGAGGAAGACTCGGAACAAGATAATCCTGACGACGCTGCT
GGTGTCGGCGGCGGCGATCCTGATCGGCGGGACGGTGGCGCTGATCCTGACGGCGGGGAC
ATGGAAGGTGAAGATGAAGGAGTCGCGCGAGAAGATCTGCGACAAGGGGTGGGAGTGCTC
GGGTAGCAAGTACTGCTGCAACGACACCATCACCGACTTCTTCAAGGTGTACCAGTTCGA
GAACCTCTTCTCCAAGCGCAACAGCCCCGTCGCCCACGCCGTCGGCTTCTGGGACTACCA
GTCCTTCATCACCGCCGCCGCCCTCTTCGAGCCCCTCGGCTTCTGCACCACCGGCGGCAA
GCAGATGCAGATGATGGAGCTCTGCGCCTTCCTCGGCCATGTCGGCTCCAAGACCTCATG
TGGATTTGGTGTGGCGACCGGCGGGCCGACGGCGTGGGGGCTCTGCTACAACCACGAGAT
GAGCCCTAAGGAGGATTACTGCGACAAGACGAACCTGCAGTATCCCTGCGTCGAGGGCGC
CGAGTACTACGGCCGCGGCGCCATCCCCGTCTTCTGGAACTACAACTATGGCGCGGCGGG
CGACGGGATACACGAGGACCTGCTCCACCACCCGGAGTACCTGGAGCAGAACGCGACGAT
GGCGTTCATGGCGGCGATGTGGCGGTGGATGACGCCGATGAAGAAGAAGCAGCCGTCGGC
GCACGACGTGTTCGTGGGCAACTGGAAGCCCACCAAGAACGACACGCTCGCCAAGCGCCT
CCCCGGGTTCGGCGCCACCATGAACGTGCTCTACGGCGACCAGATCTGCGGCAAGGGCTA
CATCGACGACATGAACGTCATCATCTCGCACTACCAGTACTACCTCGACCTCATGGGCGT
CGGCCGCGAGCACTCCGGCGACAACCGCGACTGCGCCGAGCAGGCCGCCTTCAACCCCTC
CTACAAGAAGCCCGACGATCAGCAGCAACAAAGCTAGAACAGATCACCCCCAATTCCCCC
CAATTCCACGGTAAAGAATTCACCCAATGTGTTGTTGTATACATCTTCTTGCTACTGCAA
TCGCTATTGCCAATGCAAACCAACCATTGCCATTGCTGTTGCCTCGTGAGCTATACAGAT
TAACGGATTCTTCATCAGTGTGAGGAGCTGTGGTTTGCATTGGTGTATTTCTGAGTAGCG
GATTTTGAGGGAAGTGTCAACTGTGTGTGTGATGCCTATGGGATTTGGGAAATTTGTTGT
AGCCCTTGTTGTACCATAGTGTACATTTTCATTCCATTTGATTTTTGTCACATATACATG
TTTAAAGAGGAGGATTCAGGATAAACATACCATGATTTTGATGAAAAAAAAATGTATCTG
TTATTGAGGTGTGTGTAGCTGTTTAGCATGCATGCAATAGTTTTCATGCATCAGTGCGTG
ATAATGCTGTGTGTCATAATTTGGGCTGGGTAAAAATACTCAGTCCTCAGTTACTTCTCG
CTATTGATCTTTCAGCTTTGATCAAAAAAAAAAAAAAAAAAA

consensusID : consensus_14025#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 789
fasta sequence

                              [ACGCCCCCCTTAGGTGGGACTACCAGTCCTTCATCACCGCCGCCGCCCTCTTCGAGCCCCTCGGCTTCTGCACCACCGGCCGCAAGCAGATGCAGATGATGGAGCTCTGCGCCTTCCTCGGCCATGTCGGCTCCAAGACCTCATGTGGATTTGGTGTGGCGACCGGCGGGCCGACGGCGTGGGGGCTCTGCTACAACCACGAGATGAGCCCTAAGGAGGATTACTGCGACAAGACGAACCTGCAGTATCCCTGCGTCGAGGGCGCCGAGTACTACGGCCGCGGCGCCATCCCCGTCTTCTGGAACTACAACTATGGCGCGGCGGGCGACGGGATACACGAGGACCTGCTCCACCACCCGGAGTACCTGGAGCAGAACGCGACGATGGCGTTCATGGCGGCGATGTGGCGGTGGATGACGCCGATGAAGAAGAAGCAGCCGTCGGCGCACGACGTGTTCGGGGGCAACTGGAAGCCCACCAAGAACGACACGCTCGCCAAGCGCCTCCCCGGGTTCGGCGCCACCATGAACGTGCTCTACGGCGACCAGATCTGCGGCAAGGGCTACATCGACGACATGAACGTCATCATCTCGCACTACCAGTACTACCTCGACCTCATGGGCGTCGGCCGCGAGCACTCCGGCGACAACCGCGACTGCGCCGAGCAGGCCGCCTTCAACCCCTCCTACAAGAAGCCCGACGATCAGCAGCAACAAAGCTAGAACAGATCACCCCCAATTCCCCCCCATTCCACGGTAAAGAATTCACCCAATGTGTTGTTGTATACAT]

[+] EMBL CB652613             [ACGCCCCCCTTAGGTGGGACTACCAGTCCTTCATCACCGCCGCCGCCCTCTTCGAGCCCCTCGGCTTCTGCACCACCGGCCGCAAGCAGATGCAGATGATGGAGCTCTGCGCCTTCCTCGGCCATGTCGGCTCCAAGACCTCATGTGGATTTGGTGTGGCGACCGGCGGGCCGACGGCGTGGGGGCTCTGCTACAACCACGAGATGAGCCCTAAGGAGGATTACTGCGACAAGACGAACCTGCAGTATCCCTGCGTCGAGGGCGCCGAGTACTACGGCCGCGGCGCCATCCCCGTCTTCTGGAACTACAACTATGGCGCGGCGGGCGACGGGATACACGAGGACCTGCTCCACCACCCGGAGTACCTGGAGCAGAACGCGACGATGGCGTTCATGGCGGCGATGTGGCGGTGGATGACGCCGATGAAGAAGAAGCAGCCGTCGGCGCACGACGTGTTCGGGGGCAACTGGAAGCCCACCAAGAACGACACGCTCGCCAAGCGCCTCCCCGGGTTCGGCGCCACCATGAACGTGCTCTACGGCGACCAGATCTGCGGCAAGGGCTACATCGACGACATGAACGTCATCATCTCGCACTACCAGTACTACCTCGACCTCATGGGCGTCGGCCGCGAGCACTCCGGCGACAACCGCGACTGCGCCGAGCAGGCCGCCTTCAACCCCTCCTACAAGAAGCCCGACGATCAGCAGCAACAAAGCTAGAACAGATCACCCCCAATTCCCCCCCATTCCACGGTAAAGAATTCACCCAATGTGTTGTTGTATACAT]




>consensus_14025#1
ACGCCCCCCTTAGGTGGGACTACCAGTCCTTCATCACCGCCGCCGCCCTCTTCGAGCCCC
TCGGCTTCTGCACCACCGGCCGCAAGCAGATGCAGATGATGGAGCTCTGCGCCTTCCTCG
GCCATGTCGGCTCCAAGACCTCATGTGGATTTGGTGTGGCGACCGGCGGGCCGACGGCGT
GGGGGCTCTGCTACAACCACGAGATGAGCCCTAAGGAGGATTACTGCGACAAGACGAACC
TGCAGTATCCCTGCGTCGAGGGCGCCGAGTACTACGGCCGCGGCGCCATCCCCGTCTTCT
GGAACTACAACTATGGCGCGGCGGGCGACGGGATACACGAGGACCTGCTCCACCACCCGG
AGTACCTGGAGCAGAACGCGACGATGGCGTTCATGGCGGCGATGTGGCGGTGGATGACGC
CGATGAAGAAGAAGCAGCCGTCGGCGCACGACGTGTTCGGGGGCAACTGGAAGCCCACCA
AGAACGACACGCTCGCCAAGCGCCTCCCCGGGTTCGGCGCCACCATGAACGTGCTCTACG
GCGACCAGATCTGCGGCAAGGGCTACATCGACGACATGAACGTCATCATCTCGCACTACC
AGTACTACCTCGACCTCATGGGCGTCGGCCGCGAGCACTCCGGCGACAACCGCGACTGCG
CCGAGCAGGCCGCCTTCAACCCCTCCTACAAGAAGCCCGACGATCAGCAGCAACAAAGCT
AGAACAGATCACCCCCAATTCCCCCCCATTCCACGGTAAAGAATTCACCCAATGTGTTGT
TGTATACAT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14025#0      CGGCAACGTCTTACCAGCTCGGAGCTCTCTCGCTTGCTGCCTCTTCTCTTCTTCCTCCCG 60
consensus_14025#1      ------------------------------------------------------------
                                                                                   

consensus_14025#0      CCACCGACACCACCTCCACCAGCAGCTTCGCCTTCGCCGCGTCGGCATCTGCAGTTGCCA 120
consensus_14025#1      ------------------------------------------------------------
                                                                                   

consensus_14025#0      CTTCGCTTTCTTCCACTCCCTCCTCCTCCTCGCTTACCTCACACTCCTCCCCCCCAATTT 180
consensus_14025#1      ------------------------------------------------------------
                                                                                   

consensus_14025#0      CATCCCCCACCCACCACCAGATCCCCCACCACCTGCCGCATTCTCCCCCCCAAGATCCAG 240
consensus_14025#1      ------------------------------------------------------------
                                                                                   

consensus_14025#0      ATCGCCGGTCACCCCCACGAACTCGCTCGAGATCCAGAGAGAGAGAGAGAGGCAGTTTCT 300
consensus_14025#1      ------------------------------------------------------------
                                                                                   

consensus_14025#0      TGGTTGATTTTCGAGGATGAAGAGGAAGACTCGGAACAAGATAATCCTGACGACGCTGCT 360
consensus_14025#1      ------------------------------------------------------------
                                                                                   

consensus_14025#0      GGTGTCGGCGGCGGCGATCCTGATCGGCGGGACGGTGGCGCTGATCCTGACGGCGGGGAC 420
consensus_14025#1      ------------------------------------------------------------
                                                                                   

consensus_14025#0      ATGGAAGGTGAAGATGAAGGAGTCGCGCGAGAAGATCTGCGACAAGGGGTGGGAGTGCTC 480
consensus_14025#1      ------------------------------------------------------------
                                                                                   

consensus_14025#0      GGGTAGCAAGTACTGCTGCAACGACACCATCACCGACTTCTTCAAGGTGTACCAGTTCGA 540
consensus_14025#1      ------------------------------------------------------------
                                                                                   

consensus_14025#0      GAACCTCTTCTCCAAGCGCAACAGCCCCGTCGCCCACGCCGTCGGCTTCTGGGACTACCA 600
consensus_14025#1      -----------------------------------ACGCCCCCCTTAGGTGGGACTACCA 25
                                                          *****  *      ***********

consensus_14025#0      GTCCTTCATCACCGCCGCCGCCCTCTTCGAGCCCCTCGGCTTCTGCACCACCGGCGGCAA 660
consensus_14025#1      GTCCTTCATCACCGCCGCCGCCCTCTTCGAGCCCCTCGGCTTCTGCACCACCGGCCGCAA 85
                       ******************************************************* ****

consensus_14025#0      GCAGATGCAGATGATGGAGCTCTGCGCCTTCCTCGGCCATGTCGGCTCCAAGACCTCATG 720
consensus_14025#1      GCAGATGCAGATGATGGAGCTCTGCGCCTTCCTCGGCCATGTCGGCTCCAAGACCTCATG 145
                       ************************************************************

consensus_14025#0      TGGATTTGGTGTGGCGACCGGCGGGCCGACGGCGTGGGGGCTCTGCTACAACCACGAGAT 780
consensus_14025#1      TGGATTTGGTGTGGCGACCGGCGGGCCGACGGCGTGGGGGCTCTGCTACAACCACGAGAT 205
                       ************************************************************

consensus_14025#0      GAGCCCTAAGGAGGATTACTGCGACAAGACGAACCTGCAGTATCCCTGCGTCGAGGGCGC 840
consensus_14025#1      GAGCCCTAAGGAGGATTACTGCGACAAGACGAACCTGCAGTATCCCTGCGTCGAGGGCGC 265
                       ************************************************************

consensus_14025#0      CGAGTACTACGGCCGCGGCGCCATCCCCGTCTTCTGGAACTACAACTATGGCGCGGCGGG 900
consensus_14025#1      CGAGTACTACGGCCGCGGCGCCATCCCCGTCTTCTGGAACTACAACTATGGCGCGGCGGG 325
                       ************************************************************

consensus_14025#0      CGACGGGATACACGAGGACCTGCTCCACCACCCGGAGTACCTGGAGCAGAACGCGACGAT 960
consensus_14025#1      CGACGGGATACACGAGGACCTGCTCCACCACCCGGAGTACCTGGAGCAGAACGCGACGAT 385
                       ************************************************************

consensus_14025#0      GGCGTTCATGGCGGCGATGTGGCGGTGGATGACGCCGATGAAGAAGAAGCAGCCGTCGGC 1020
consensus_14025#1      GGCGTTCATGGCGGCGATGTGGCGGTGGATGACGCCGATGAAGAAGAAGCAGCCGTCGGC 445
                       ************************************************************

consensus_14025#0      GCACGACGTGTTCGTGGGCAACTGGAAGCCCACCAAGAACGACACGCTCGCCAAGCGCCT 1080
consensus_14025#1      GCACGACGTGTTCGGGGGCAACTGGAAGCCCACCAAGAACGACACGCTCGCCAAGCGCCT 505
                       ************** *********************************************

consensus_14025#0      CCCCGGGTTCGGCGCCACCATGAACGTGCTCTACGGCGACCAGATCTGCGGCAAGGGCTA 1140
consensus_14025#1      CCCCGGGTTCGGCGCCACCATGAACGTGCTCTACGGCGACCAGATCTGCGGCAAGGGCTA 565
                       ************************************************************

consensus_14025#0      CATCGACGACATGAACGTCATCATCTCGCACTACCAGTACTACCTCGACCTCATGGGCGT 1200
consensus_14025#1      CATCGACGACATGAACGTCATCATCTCGCACTACCAGTACTACCTCGACCTCATGGGCGT 625
                       ************************************************************

consensus_14025#0      CGGCCGCGAGCACTCCGGCGACAACCGCGACTGCGCCGAGCAGGCCGCCTTCAACCCCTC 1260
consensus_14025#1      CGGCCGCGAGCACTCCGGCGACAACCGCGACTGCGCCGAGCAGGCCGCCTTCAACCCCTC 685
                       ************************************************************

consensus_14025#0      CTACAAGAAGCCCGACGATCAGCAGCAACAAAGCTAGAACAGATCACCCCCAATTCCCCC 1320
consensus_14025#1      CTACAAGAAGCCCGACGATCAGCAGCAACAAAGCTAGAACAGATCACCCCCAATTCCCCC 745
                       ************************************************************

consensus_14025#0      CAATTCCACGGTAAAGAATTCACCCAATGTGTTGTTGTATACATCTTCTTGCTACTGCAA 1380
consensus_14025#1      CCATTCCACGGTAAAGAATTCACCCAATGTGTTGTTGTATACAT---------------- 789
                       * ******************************************                

consensus_14025#0      TCGCTATTGCCAATGCAAACCAACCATTGCCATTGCTGTTGCCTCGTGAGCTATACAGAT 1440
consensus_14025#1      ------------------------------------------------------------
                                                                                   

consensus_14025#0      TAACGGATTCTTCATCAGTGTGAGGAGCTGTGGTTTGCATTGGTGTATTTCTGAGTAGCG 1500
consensus_14025#1      ------------------------------------------------------------
                                                                                   

consensus_14025#0      GATTTTGAGGGAAGTGTCAACTGTGTGTGTGATGCCTATGGGATTTGGGAAATTTGTTGT 1560
consensus_14025#1      ------------------------------------------------------------
                                                                                   

consensus_14025#0      AGCCCTTGTTGTACCATAGTGTACATTTTCATTCCATTTGATTTTTGTCACATATACATG 1620
consensus_14025#1      ------------------------------------------------------------
                                                                                   

consensus_14025#0      TTTAAAGAGGAGGATTCAGGATAAACATACCATGATTTTGATGAAAAAAAAATGTATCTG 1680
consensus_14025#1      ------------------------------------------------------------
                                                                                   

consensus_14025#0      TTATTGAGGTGTGTGTAGCTGTTTAGCATGCATGCAATAGTTTTCATGCATCAGTGCGTG 1740
consensus_14025#1      ------------------------------------------------------------
                                                                                   

consensus_14025#0      ATAATGCTGTGTGTCATAATTTGGGCTGGGTAAAAATACTCAGTCCTCAGTTACTTCTCG 1800
consensus_14025#1      ------------------------------------------------------------
                                                                                   

consensus_14025#0      CTATTGATCTTTCAGCTTTGATCAAAAAAAAAAAAAAAAAAA 1842
consensus_14025#1      ------------------------------------------