cluster # 14030

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Oryza sativa
cluster # 14030 cluster # 14030 Sequences # 14 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_14030#0 length = 962 sequences # 11

consensus_14030#1 length = 786 sequences # 2
consensus_14030#2 length = 356 sequences # 1

consensusID : consensus_14030#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 962
fasta sequence

                              [CACCACCTCTTCTCTTTCCACCACCAACACCAACCCCACGC-GACCACCCCCAATCCTCGATCAAACGCCCTAGGATTTCATC-GCAAGCAAGGAAGGAGGAGACCAAATCCAATCCAATCCCCCATGGCC-GGCGCGTCGACCTTCAGTGGCGACGAGACGGCGCCCTTCTTCGGCTTCCTGGGCGCCGCGGCGGCGCTCGTCTTCTCCTGCATGGGCGCCGCCTACGGCACGGCCAAGAGCGGCGTCGGGGTGGCGTCCATGGGCGTCATGCGCCCGGAGCTCGTCATGAAATCCATCGTGCCCGTCGTCATGGCCGGGGTGCTCGGGATCTACGGCCTCATCATCGCCGTCATCATCAGCACCGGGATCAACCCCAAGGCCAAGCCCTACTTCCTCTTCGACGGCTACGCGCACCTCTCCTCCGGCCTCGCGTGCGGCC-TCGCCGGCCTCGCCGCCGGGATGGCCATCGGCATCGTCGGCGACGCCGGCGTCAGGGCAAATGCTCAACAGCCAAAACTGTTTGTGGGTATGATCCTCATCCTTATCTTTGCGGAAGCGCTTGCACTCTATGGTCTCATTGTTGGTATCATCTTGTCATCTCGTGCTGGTCAATCCCGAGCGGACTAATTTATCAGGCTATAATGCCTGTAACACTTGTCTGTCATGAATATAATGGCATGTCAATATTCTTTTGCTGTATCTTTGTGGTTACGTACTGTTGTTCAGACTACGTTTTCTTTTGCTTATTTTTGAGATAGTACAACCAACTTATAATTTTGACTCACCCCAGAGCCATGGCTACATTTGTTGCATGGGAACATGGACTTATATGGTGCTAGACGATTTGGTGAATAAACAACAAATTTTTGTAGGGAATATTTATCACTTGTGCTATGGCCAAAAAACTTGCCCCAATAGAGGATTGCAGGACTGTTTGTGTGTCCAAAAAAAAAAAAAAAAAA]

[+] EMBL AK099459             [CACCACCTCTTCTCTTTCCACCACCAACACCAACCCCACGC GACCACCCCCAATCCTCGATCAAACGCCCTAGGATTTCATC GCAAGCAAGGAAGGAGGAGACCAAATCCAATCCAATCCCCCATGGCC GGCGCGTCGACCTTCAGTGGCGACGAGACGGCGCCCTTCTTCGGCTTCCTGGGCGCCGCGGCGGCGCTCGTCTTCTCCTGCATGGGCGCCGCCTACGGCACGGCCAAGAGCGGCGTCGGGGTGGCGTCCATGGGCGTCATGCGCCCGGAGCTCGTCATGAAATCCATCGTGCCCGTCGTCATGGCCGGGGTGCTCGGGATCTACGGCCTCATCATCGCCGTCATCATCAGCACCGGGATCAACCCCAAGGCCAAGCCCTACTTCCTCTTCGACGGCTACGCGCACCTCTCCTCCGGCCTCGCGTGCGGCC TCGCCGGCCTCGCCGCCGGGATGGCCAACGGCATCGTCGGCGACGCCGGCGTCAGGGCAAATGCTCAACAGCCAAAACTGTTTGTGGGTATGATCCTCATCCTTATCTTTGCGGAAGCGCTTGCACTCTATGGTCTCATTGTTGGTATCATCTTGTCATCTCGTGCTGGTCAATCCCGAGCGGACTAATTTATCAGGCTATAATGCCTGTAACACTTGTCTGTCATGAATATAATGGCATGTCAATATTCTTTTGCTGTATCTTTGTGGTTACGTACTGTTGTTCAGACTACGTTTTCTTTTGCTTATTTTTGAGATAGTACAACCAACTTATAATTTTGACTCACCCCAGAGCCATGGCTACATTTGTTGCATGGGAACATGGACTTATATGGTGCTAGACGATTTGGTGAATAAACAACAAAT                                                                                                  ]
[+] EMBL AU182538             [                      ACCAACACCAACCCCACGCAGACCACCCCCAATCCTCGATCAAACGCCCTAGGATTTCATCAGCAAGCAAGGAAGGAGGAGACCAAATCCAATCCAATCCCCCATGGCCAGGCGCGTCGACCTTCAGTGGCGACGAGACGGCGCCCTTCTTCGGNTTCCTGGGCGCCGCGGCGGCGCTCGTCTTCTCCTGCATGGGCGCCGCCTACGGCACGGCCAAGAGCGGNGTCGGGGTGGCGTCCATGGGCGTCATGCGCCCGGAGCTCGTCATGAAATCCATCGTGCCCGTCGTCATGGCCGGGGTGCTCGGGATCTACGGCCTAATCATNGCCGTCATCATCAGCACCGGGATCAACCCCAAGGCCAAGCCCTACTTCCTCTTCGACGGNTAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CB680099             [                                                                AACGCCCTATGATTTCATC GCAAGCAAGGAAGGAGGAGACCAAATCCAATTCAATCCCCCATGGCC GGCGCGTCGACCTTCAGTGGCGACGAGACGGCGCCCTTCTTCGGCTTCCTGGGCGCCGCGGCGGCGCTCGTCTTCTCCTGCATGGGCGCCGCCTACGGCACGGCCAAGAGCGGCGTCGGGGTGGCGTCCATGGGCGTCATGCGCCCGGAGCTCGTCATGAAATCCATCGTGCCCGTCGTCATGGCCGGGGTGCTCGGGATCTACGGCCTCATCATCGCCGTCATCATCAGCACCGGGATCAACCCCAAGGCCAAGCCCTACTTCCTCTTCGACGGCTACGCGCACCTCTCCTCCGGCCTCGCGTGCGGCC TCGCCGGCCTCGCCGCCGGGATGGCCATCGGCATCGTCGGCGACGCCGGCGTCAGGGCAAATGCTCAACAGCCAAAACTGTTTGTGGGTATGATCCTCATCCTTATCTTTGCGGAAGCGCTTGCACTCTATGGTCTCATTGTTGGTATCATCTTGTCATCTCGTGCTGGTCAATCCCGAGCGGACTAATTTATCAGGCTATAATGCCTGTAACACTTGTCTGTCATGAATATAATGGCATGTCAATATTCTTTTGCTGTATCTTTGTGGTTACGTACTGTTGTTCAGACTACGTTTTCTTTTGCTTATTTTTGAGATAGTACAACCAACTTATAATTTTGACTCACCCCAGAGCCATGGCTACATTTGTTGCATGGGAACATGGACTTATATGGTGCTAGACGA                                                                                                                       ]
[+] EMBL C71814               [                                                                                     CAAGCAAGGAAGGAGGAGACCAAATCCAATCCAATCCCCCATGGCC GGCGCGTCGACCTTCAGTGGCGACGAGACGGCGCCCTTNTTCGGCTTCCTGGGCGCCGCGGCGGCGCTCGTTTTCTCCTGCATGGNCGCCGCCTACGGCACGGCCAAGAGCGGCGTCGGGNTGGCGTCCATGGGCGTNATGCGCCCGGAGCTCGTAATGAAATCCATCGTGCCCGTNGTCATGGCCGGGGTGCTCGGAATCTACGGCCTCATCATCGNCGTCATCATCAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL OSR18731A            [                                                                                          AAGGAAGGAGGAGACCAAATCCAATCCAATCCCCCATGGNC GGCGCGTCGACCTTCAGTGGCGACGAGACGGCGCCCTTCTTCGGCTTCCTGGGCGCCGCGGCGGCGCTCGTCTTCTCCTGCATGGGCGCCGCCTACGGCACGGCCAAGAGCGGCGTCGGGGTGGCGTCCATGGGCGTCATGCGCCCGGAGCTCGTCATGAAATCCATCGTGCCCGTCGTCATGGCCGGGGTGCTCGGGATCTACGGCCTCATCATCGCCGTCATCATCAGCACCGGGATCAACCCCAAGGCCAAGCCCTACTTCCTCTTCGACGGCTACGCGCACCTCTCCTCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AU184534             [                                                                                                     AGACCAAATCCAATCCAATCCCCCATGGCC GGCGCGTCGACCTTCAGTGGCGACGAGACGGCGCCCTTCTTCGGCTTCCTGGGCGCCGCGGCGGCGCTCGTCTTCTCCTGCATGGGCGCCGCCTACGGCACGGCCAAGAGCGGCGTCGGGGTGGCGTCCATGGGCGTCATGCGCCCGGAGCTCGTCATGAAATCCATCGTGCCCGTCGTCATGGCCGGGGTGCTCGGGATCTACGGCCTCATCATCGCCGTCATCATCAGCACCGGGATCAACCCCAAGGCCAAGCCCTACTTCCTCTTCGACGGCTACGCGCACCTCTCCTCCGGCCTCGCGTGCGGCCTTCGCCGGCCTCGCCGCCGGGATGGCCATCGGCATCGTCGGCGACGCCGGCGTCAGGGCAAATGCTCAACAGCCAAAACTGTTTGNGGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CB680100             [                                                                                                                                                                                                                             CGCCTACGGCACGGCCAAGAGCGGCGTCGGGGTGGCGTCCATGGGCGTCATGCGCCCGGAGCTCGTCATGAAATCCATCGTGCCCGTCGTCATGGCCGGGGTGCTCGGGATTTACGGCCTCATCATCGCCGTCATCATCAGCACCGGGATCAACCCCAAGGCCAAGCCCTACTTCCTTTTGGACGGTTACGCGCACCTTTCCTCCGGCCTCGCGTGCGGCC TCGCCGGCCTCGCCGCCGGGATGGCCATCGGCATCGTCGGCGACGCCGGCGTCAGGGCAAATGCTCAACAGCCAAAACTGTTTGTGGGTATGATCCTCATCCTTATCTTTGCGGAAGCGCTTGCACTCTATGGTCTCATTGTTGGTATCATCTTGTCATCTCGTGCTGGTCAATCCCGAGCGGATTAATTTATCAGGCTATAATGCCTGTAACACTTGTCTGTCATGAATATAATGGCATGTCAATATTCTTTTGCTGTATCTTTGTGGTTACGTACTGTTGTTCAGACTACGTTTTCTTTTGCTTATTTTTGAGATAGTACAACCAACTTATAATTTTGACTCACCCCAGAGCCATGGCTACATTTGTTGCATGGGAACATGGACTTATATGGTGCTAGACGATTTGGTGAATAAACAACAAATTTTTGTAGGGAATATTTATCACTTGTGCTATGGCCAAAAAA                                                         ]
[+] EMBL CB634709             [                                                                                                                                                                                                                                                          GGGTGGCGTCCATGGGCGTCATGCGCCCGGAGCTCGTCATGAAGTCCATCGTGCCCGTCGTCATGGCCGGGGTGCTCGGGATCTACGGCCTCATCATCGCCGTCATCATCAGCACCGGGATCAACCCCAAGGCCAAGCCCTACTTCCTCTTCGACGGCTACGCGCACCTCTCCTCCGGCCTCGCGTGCGGCC TCGCCGGCCTCGCCGTCGGGATGGTCATCGGTATCGTCc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL C98543               [                                                                                                                                                                                                                                                                   CCATGGGCGTCATGCGCCCGGAGCTCGTCATGAAATCCATCGTGCCCGTCGTCATGGCCGGGGTGCTCGGGATCTACGGCCTCATCATCGCCGTCATCATCAGCACCGGGATCAACCCCAAGGCCAAGCCCTACTTCCTCTTCGACGG TACGCGCACCTCTCCTCCGGCCTCGCGTGCGGCC TCGCCGGCCTCGCCGCCGGGATGGCCATCGGCATCGTCGGCGACGCCGGCGTCAGGGCAAATGCTCAACAGCCAAAACTGTTTGTGGGTATGATCCTCATCCTTATCTTTGCGGAAGCGCTTGCACTCTATGGTCTCATTGTTGGTATCATCTTGTCATCTCGTGCTGGTCAATCCCGAGCGGACTAATTTATCAGGCTATAATGCCTGTAACACTTGTCTGTCATGAATATAATGGCATGTCAATATTCTTTTGCTGTATCTTTGTGGTTACGTACTGTTGTTCAGACTACGTTTTCTTTTGCTTAaaaa                                                                                                                                                                                                                    ]
[+] EMBL AU165778             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ATCTCGTGCTGGTCAATCCCGAGCGGACTAATTTATCAGGCTATAATGCCTGTAACACTTGTCTGTCATGAATATAATGGCATGTCAATATTCTTTTGCTGTATCTTTGTGGTTACGTACTGTTGTTCAGACTACGTTTTCTTTTGCTTATTTTTGAGATAGTACAACCAACTTATAATTTTGACTCACCCCAGAGCCATGGCTACATTTGTTGCATGGGAACATGGACTTATATGGTGCTAGACGATTTGGTGAATAAACAACAAATTTTTGTACTGAATATTTATCACTTGTGCTATGGACACATCGCTTGCCCCAATAGAGGATTGCAGGACTGTTTGTGTGTCCAAAAAAAAAAAAAAAAAA]
[-] EMBL AU225486             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ccgctTATAATGGCATGTCAATATTCTTTTGCTGTATCTTTGTGGTTACGTACTGTTGTTCAGACTACGTTTTCTTTTGCTTATTTTTGAGATAGTACAACCAAgcggc                                                                                                                                                                                              ]




>consensus_14030#0
CACCACCTCTTCTCTTTCCACCACCAACACCAACCCCACGCGACCACCCCCAATCCTCGA
TCAAACGCCCTAGGATTTCATCGCAAGCAAGGAAGGAGGAGACCAAATCCAATCCAATCC
CCCATGGCCGGCGCGTCGACCTTCAGTGGCGACGAGACGGCGCCCTTCTTCGGCTTCCTG
GGCGCCGCGGCGGCGCTCGTCTTCTCCTGCATGGGCGCCGCCTACGGCACGGCCAAGAGC
GGCGTCGGGGTGGCGTCCATGGGCGTCATGCGCCCGGAGCTCGTCATGAAATCCATCGTG
CCCGTCGTCATGGCCGGGGTGCTCGGGATCTACGGCCTCATCATCGCCGTCATCATCAGC
ACCGGGATCAACCCCAAGGCCAAGCCCTACTTCCTCTTCGACGGCTACGCGCACCTCTCC
TCCGGCCTCGCGTGCGGCCTCGCCGGCCTCGCCGCCGGGATGGCCATCGGCATCGTCGGC
GACGCCGGCGTCAGGGCAAATGCTCAACAGCCAAAACTGTTTGTGGGTATGATCCTCATC
CTTATCTTTGCGGAAGCGCTTGCACTCTATGGTCTCATTGTTGGTATCATCTTGTCATCT
CGTGCTGGTCAATCCCGAGCGGACTAATTTATCAGGCTATAATGCCTGTAACACTTGTCT
GTCATGAATATAATGGCATGTCAATATTCTTTTGCTGTATCTTTGTGGTTACGTACTGTT
GTTCAGACTACGTTTTCTTTTGCTTATTTTTGAGATAGTACAACCAACTTATAATTTTGA
CTCACCCCAGAGCCATGGCTACATTTGTTGCATGGGAACATGGACTTATATGGTGCTAGA
CGATTTGGTGAATAAACAACAAATTTTTGTAGGGAATATTTATCACTTGTGCTATGGCCA
AAAAACTTGCCCCAATAGAGGATTGCAGGACTGTTTGTGTGTCCAAAAAAAAAAAAAAAA
AA

consensusID : consensus_14030#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 786
fasta sequence

                              [GCAAAGTTATGTCCTTGTAGTTCAGCCAAACTTTACAAGCCATTTTGTCAATCTACATTACTGCACAATTCATGCCTGCGGTCAGTTCATGTGATCGCAGCTAAGATTCTTTTGGTATACTGACCTACTGGATAACTGGATGTTGCATGATCTATGATTAAATTTCAAATCATGATTTACAGTAATTTATCGTTGTACCTTGATTTGTGACAAAGGAAACCATGCATGTATGTCTCTCAATGGTTATATGTTCCTTCTACAGTTTCATGGATTATATGATCGCATTTAGTACCATTTCATGACACTTTGTGCAGCTTGATTGGAACCACAGGAATTTTGATTTTTATGCTTTGCTTGGTGCGCTGTTCTAACATAATCTACTTTTGCTCTCAGGGCAAATGCTCAACAGCCAAAACTGTTTGTGGGTATGATCCTCATCCTTATCTTTGCGGAAGCGCTTGCACTCTATGGTCTCATTGTTGGTATCATCTTGTCATCTCGTGCTGGTCAATCCCGAGCGGACTAATTTATCAGGCTATAATGCCTGTAACACTTGTCTGTCATGAATATAATGGCATGTCAATATTCTTTTGCTGTATCTTTGTGGTTACGTACTGTTGTTCAGACTACGTTTTCTTTTGCTTATTCTTGAGATAGTACAACCAACTTATAATTTTGACTCACCCCAGAGCCATGGCTACATTTGTTGCATGGGAACATGGACTTATATGGTGCTAGACGATTTGGTGAATAAACAACAAATTTTTGTACTGAATAAAAAAAAAG]

[-] EMBL CB634710             [GCAAAGTTATGTCCTTGTAGTTCAGCCAAACTTTACAAGCCATTTTGTCAATCTACATTACTGCACAATTCATGCCTGCGGTCAGTTCATGTGATCGCAGCTAAGATTCTTTTGGTATACTGACCTACTGGATAACTGGATGTTGCATGATCTATGATTAAATTTCAAATCATGATTTACAGTAATTTATCGTTGTACCTTGATTTGTGACAAAGGAAACCATGCATGTATGTCTCTCAATGGTTATATGTTCCTTCTACAGTTTCATGGATTATATGATCGCATTTAGTACCATTTCATGACACTTTGTGCAGCTTGATTGGAACCACAGGAATTTTGATTTTTATGCTTTGCTTGGTGCGCTGTTCTAACATAATCTACTTTTGCTCTCAGGGCAAATGCTCAACAGCCAAAACTGTTTGTGGGTATGATCCTCATCCTTATCTTTGCGGAAGCGCTTGCACTCTATGGTCTCATTGTTGGTATCATCTTGTCATCTCGTGCTGGTCAATCCCGAGCGGACTAATTTATCAGGCTATAATGCCTGTAACACTTGTCTGTCATGAATATAATGGCATGTCAATATTCTTTTGCTGTATCTTTGTGGTTACGTACTGTTGTTCAGACTACGTTTTCTTTTGCTTATTCTTGAGATAGTACAACCAACTTATAATTTTGACTCACCCCAGAGCCATGGCTACATTTGTTGCATGGGAACATGGACTTATATGGTGCTAGACGATTTGGTGAATAAACAACAAATTTTTGTACTGAATAAAAAAAAAG]
[+] EMBL CA764641             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TGGCATGTCAATATTCTTTTGCTGTATCTTTGTGGTTACGTACTGTTGTTCAGACTACGTTTTCTTTTGCTTATTCTTGAGATAGTACAACCAACTTATAATTTTGACTCACCCCAGAGCCATGGCTACATTTGTTGCATGGGAACATGGACTTATATGGTGCTAGACGATTTGGTGAATAAACAACAAATTTTTGTACTGAA           ]




>consensus_14030#1
GCAAAGTTATGTCCTTGTAGTTCAGCCAAACTTTACAAGCCATTTTGTCAATCTACATTA
CTGCACAATTCATGCCTGCGGTCAGTTCATGTGATCGCAGCTAAGATTCTTTTGGTATAC
TGACCTACTGGATAACTGGATGTTGCATGATCTATGATTAAATTTCAAATCATGATTTAC
AGTAATTTATCGTTGTACCTTGATTTGTGACAAAGGAAACCATGCATGTATGTCTCTCAA
TGGTTATATGTTCCTTCTACAGTTTCATGGATTATATGATCGCATTTAGTACCATTTCAT
GACACTTTGTGCAGCTTGATTGGAACCACAGGAATTTTGATTTTTATGCTTTGCTTGGTG
CGCTGTTCTAACATAATCTACTTTTGCTCTCAGGGCAAATGCTCAACAGCCAAAACTGTT
TGTGGGTATGATCCTCATCCTTATCTTTGCGGAAGCGCTTGCACTCTATGGTCTCATTGT
TGGTATCATCTTGTCATCTCGTGCTGGTCAATCCCGAGCGGACTAATTTATCAGGCTATA
ATGCCTGTAACACTTGTCTGTCATGAATATAATGGCATGTCAATATTCTTTTGCTGTATC
TTTGTGGTTACGTACTGTTGTTCAGACTACGTTTTCTTTTGCTTATTCTTGAGATAGTAC
AACCAACTTATAATTTTGACTCACCCCAGAGCCATGGCTACATTTGTTGCATGGGAACAT
GGACTTATATGGTGCTAGACGATTTGGTGAATAAACAACAAATTTTTGTACTGAATAAAA
AAAAAG

consensusID : consensus_14030#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 356
fasta sequence

                              [GGCCTNGCCGCCGGGATGGCCATCGGCATNGTCGGCGACGCCGGNGTCAGGGCAAATGCTCAACAGCCAAAACTGTTTGTGGGTATGATCCTCATCCTTATCTTTGCGGAAGCGCTTGCNCTCTATGGTCTCATTGTTGGNATCATCTTGTCATCTCGTGCTGGTCAATCCCGAGCGGNCTAATTTNTCAGGCTATAATGCCTGTAACACTTGTNTGTCATGAATATAATGGCATGTCAATATTNTTTTGCTGTATCTTTGTGGTTACGTACTGTTGTTCAGACTACGTTTTNTTTTGCTTATTTTTGAGATAGTACAACCCCCTTNTNAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU173251             [GGCCTNGCCGCCGGGATGGCCATCGGCATNGTCGGCGACGCCGGNGTCAGGGCAAATGCTCAACAGCCAAAACTGTTTGTGGGTATGATCCTCATCCTTATCTTTGCGGAAGCGCTTGCNCTCTATGGTCTCATTGTTGGNATCATCTTGTCATCTCGTGCTGGTCAATCCCGAGCGGNCTAATTTNTCAGGCTATAATGCCTGTAACACTTGTNTGTCATGAATATAATGGCATGTCAATATTNTTTTGCTGTATCTTTGTGGTTACGTACTGTTGTTCAGACTACGTTTTNTTTTGCTTATTTTTGAGATAGTACAACCCCCTTNTNAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_14030#2
GGCCTNGCCGCCGGGATGGCCATCGGCATNGTCGGCGACGCCGGNGTCAGGGCAAATGCT
CAACAGCCAAAACTGTTTGTGGGTATGATCCTCATCCTTATCTTTGCGGAAGCGCTTGCN
CTCTATGGTCTCATTGTTGGNATCATCTTGTCATCTCGTGCTGGTCAATCCCGAGCGGNC
TAATTTNTCAGGCTATAATGCCTGTAACACTTGTNTGTCATGAATATAATGGCATGTCAA
TATTNTTTTGCTGTATCTTTGTGGTTACGTACTGTTGTTCAGACTACGTTTTNTTTTGCT
TATTTTTGAGATAGTACAACCCCCTTNTNAAAAAAAAAAAAAAAAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14030#0      CACCACCTCTTCTCTTTCCACCACCAACACCAACCCCACGCGACCACCCCCAATCCTCGA 60
consensus_14030#2      ------------------------------------------------------------
consensus_14030#1      ------------------------------------------------------------
                                                                                   

consensus_14030#0      TCAAACGCCCTAGGATTTCATCGCAAGCAAGGAAGGAGGAGACCAAATCCAATCCAATCC 120
consensus_14030#2      ------------------------------------------------------------
consensus_14030#1      --------------------------GCAAAGTTAT-GTCCTTGTAGTTCAGCCAAACTT 33
                                                                                   

consensus_14030#0      CCCATGGCCGGCGCGTCGACCTTCAGTGGCGACGAGACGGCGCCCTTCTTCGGCTTCCTG 180
consensus_14030#2      ------------------------------------------------------------
consensus_14030#1      TACA-AGCCATTTTGTCAATCTACATTACTGCACAATTCATGCCTGCGGTCAG-TTCATG 91
                                                                                   

consensus_14030#0      GGCGCCGCGGCGGCGCTCGTCTTCTCCTGCATGGGCGCCGCCTACGGCACGGCCAAGAGC 240
consensus_14030#2      ------------------------------------------------------------
consensus_14030#1      TG-ATCGCAGCTAAGAT--TCTTTTGGTATACTGAC-----CTACTGGATAACTGGATGT 143
                                                                                   

consensus_14030#0      GGCGTCGGGGTGGCGTCCATGGGCGTCATGCGCCCGGAGCTCGTCATGAAAT-CCATCGT 299
consensus_14030#2      ------------------------------------------------------------
consensus_14030#1      TGCAT----GATCTATGATTAAATTTCAAA---TCATGATTTACAGTAATTTATCGTTGT 196
                                                                                   

consensus_14030#0      GCCCGTCGTCATGGCCGGGGTGCTCGGG-ATCTACGGCCTC--ATCATCGCCGTCATCAT 356
consensus_14030#2      ------------------------------------------------------------
consensus_14030#1      ACCTTGATTTGTGACAAAGGAAACCATGCATGTATGTCTCTCAATGGTTATATGTTCCTT 256
                                                                                   

consensus_14030#0      CAGCACCGGGATCAACCCCAAGGCCAAGCCCTACTTCCTCTTCGACGGCTACGCGCACCT 416
consensus_14030#2      ------------------------------------------------------------
consensus_14030#1      CTACAGTTTCATGGATTATATGATCGCATTTAGTACCATTTCATGACACTTTGTGCAGCT 316
                                                                                   

consensus_14030#0      CTCCTCCGGCCTCGCG---TGCGGCCTCGCCGGCCTCGCCGCCGGGATGGCCATCGGCAT 473
consensus_14030#2      -------------------------------GGCCTNGCCGCCGGGATGGCCATCGGCAT 29
consensus_14030#1      TGATTGGAACCACAGGAATTTTGATTTTTATGCTTTGCTTGGTGCGCTGTTC--TAACAT 374
                                                      *   *    *  * * **  *     ***

consensus_14030#0      CGTCGGCGACGCCGGCGTCAGGGCAAATGCTCAACAGCCAAAACTGTTTGTGGGTATGAT 533
consensus_14030#2      NGTCGGCGACGCCGGNGTCAGGGCAAATGCTCAACAGCCAAAACTGTTTGTGGGTATGAT 89
consensus_14030#1      AATCTAC--TTTTGCTCTCAGGGCAAATGCTCAACAGCCAAAACTGTTTGTGGGTATGAT 432
                         **  *      *   *******************************************

consensus_14030#0      CCTCATCCTTATCTTTGCGGAAGCGCTTGCACTCTATGGTCTCATTGTTGGTATCATCTT 593
consensus_14030#2      CCTCATCCTTATCTTTGCGGAAGCGCTTGCNCTCTATGGTCTCATTGTTGGNATCATCTT 149
consensus_14030#1      CCTCATCCTTATCTTTGCGGAAGCGCTTGCACTCTATGGTCTCATTGTTGGTATCATCTT 492
                       ****************************** ******************** ********

consensus_14030#0      GTCATCTCGTGCTGGTCAATCCCGAGCGGACTAATTTATCAGGCTATAATGCCTGTAACA 653
consensus_14030#2      GTCATCTCGTGCTGGTCAATCCCGAGCGGNCTAATTTNTCAGGCTATAATGCCTGTAACA 209
consensus_14030#1      GTCATCTCGTGCTGGTCAATCCCGAGCGGACTAATTTATCAGGCTATAATGCCTGTAACA 552
                       ***************************** ******* **********************

consensus_14030#0      CTTGTCTGTCATGAATATAATGGCATGTCAATATTCTTTTGCTGTATCTTTGTGGTTACG 713
consensus_14030#2      CTTGTNTGTCATGAATATAATGGCATGTCAATATTNTTTTGCTGTATCTTTGTGGTTACG 269
consensus_14030#1      CTTGTCTGTCATGAATATAATGGCATGTCAATATTCTTTTGCTGTATCTTTGTGGTTACG 612
                       ***** ***************************** ************************

consensus_14030#0      TACTGTTGTTCAGACTACGTTTTCTTTTGCTTATTTTTGAGATAGTACAACCAACTTATA 773
consensus_14030#2      TACTGTTGTTCAGACTACGTTTTNTTTTGCTTATTTTTGAGATAGTACAACCCCCTTNTN 329
consensus_14030#1      TACTGTTGTTCAGACTACGTTTTCTTTTGCTTATTCTTGAGATAGTACAACCAACTTATA 672
                       *********************** *********** ****************  *** * 

consensus_14030#0      ATTTTGACTCACCCCAGAGCCATGGCTACATTTGTTGCATGGGAACATGGACTTATATGG 833
consensus_14030#2      AAAAAAAAAAAAAAAAAAAAAAAAAAA--------------------------------- 356
consensus_14030#1      ATTTTGACTCACCCCAGAGCCATGGCTACATTTGTTGCATGGGAACATGGACTTATATGG 732
                       *     *   *    * *   *                                      

consensus_14030#0      TGCTAGACGATTTGGTGAATAAACAACAAATTTTTGTAGGGAATATTTATCACTTGTGCT 893
consensus_14030#2      ------------------------------------------------------------
consensus_14030#1      TGCTAGACGATTTGGTGAATAAACAACAAATTTTTGTACTGAATAAAAAAAAAG------ 786
                                                                                   

consensus_14030#0      ATGGCCAAAAAACTTGCCCCAATAGAGGATTGCAGGACTGTTTGTGTGTCCAAAAAAAAA 953
consensus_14030#2      ------------------------------------------------------------
consensus_14030#1      ------------------------------------------------------------
                                                                                   

consensus_14030#0      AAAAAAAAA 962
consensus_14030#2      ---------
consensus_14030#1      ---------