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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14076#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1336 fasta sequence
[TCTTTTAATTTTTGGATAGGGTGATCTCTATTAAATTCAGACTAGTTCTGTCACAAATTAACAACCACATTTGTATGAGGCCTACAGTTGTGTATTCTTTTCACCAAATGCAGCACACATCATTCCCTAATACCATTCTATCACACATCTGTGCTTTCTTGTACATCATACCGTGTCGCTTCTTTCTTTTTACATTGAACAACAGTGGCCACTAATTACAGCTTCTCCTTGCTAATAAAACTCGCTGAGACTGTAGTTCAGTTCATTCCTCGGAATCGGAATCCATTGGGCATGATCCGTCATCCACGGTGGCGAGTGGATCAAACATGTGCGAGTTTGGATCCATGCACCCTGACACAATGTCCAGCTTGCAGCGATCTCCCCCCTCTTCGTAGTAGCTGCCCATCTCGCAGCTTGTGATGACAACGTTTTCGTCTGGGAAGATGGCTCTGTCGCATGCCCCTTCTCTGTTCAGTTCGTCTGCTAGACCCTCGTTGAAGAAGCTCAAGGGCTTGTTGAGCCATGGCTTGGGGACCCTGAACTTGAGGGTGTACGGTCCATCCCAATCCACCCCGTTTGTGAAGGAGAAGACGAGGGTCATGGCTGCGAGTGCAAAACCAACCAGACAAAATCTCACTCCGATGACAACATGCTATTACATACATACAGTACTAGTAACGAATCCATGGCCACTCAGATGACAACATGCTATTACATACATACAGTACTAGTAACGATCACTTGAACATATGGTGTCAGCATGATGCAAAAGCTTAATTTAAGTTAATGAGAAATTGCAGGCGAATCATTCATATCTTCAACGAAACAAAACAATCAGCTGCTGACCATGCTGCGGCACACGTATCCTGATGGTGTATATGGGAGGATCAGCTGATCCCCTCTCTTGCAGCGTCATCTGCCTCGGCTCACCACCGCACATGATCGGCTGGTTAAAACCACCATTAAACGCGATGCCAAACTGAGCGTTGGGGGTCATCTTGGTCGCTGCCGGGTTGTAGAAAAGGATCAGGCCCTCTCCAGCCGATGGAGGAAGACCGTTCATGGTCTTCCAGTAGACCGGCGCCTTGCCCAGCTCGAACTCCGCCCATGTCGGAAGCGAGCACTCGTTGGTCTGCGGCACGGCGGGCGCCGTGGCCGCGGCAGGCGCCGCGGCGGCGCCTGTGCGGACTACCCTGGCCGACGAGGAGGAGGAGGAGCTCCGGTGGCAGGTGATGGTCGCAGCGCTTGCCGGCCGCCGGGGACGGCGCTGGACGGCGCCGCCGCCGGTGCTCAGGCGGCTGCAGGAAGAGAGCGTGGCCATCCTACAGTATGCACT]
[+] EMBL CB683824 [TCTTTTAATTTTTGGATAGGGTGATCTCTATTAAATTCAGACTAGTTCTGTCACAAATTAACAACCACATTTGTATGAGGCCTACAGTTGTGTATTCTTTTCACCAAATGCAGCACACATCATTCCCTAATACCATTCTATCACACATCTGTGCTTTCTTGTACATCATACCGTGTCGCTTCTTTCTTTTTACATTGAACAACAGTGGCCACTAATTACAGCTTCTCCTTGCTAATAAAACTCGCTGAGACTGTAGTTCAGTTCATTCCTCGGAATCGGAATCCATTGGGCATGATCCGTCATCCACGGTGGCGAGTGGATCAAACATGTGCGAGTTTGGATCCATGCACCCTGACACAATGTCCAGCTTGCAGCGATCTCCCCCCTCTTCGTAGTAGCTGCCCATCTCGCAGCTTGTGATGACAACGTTTTCGTCTGGGAAGATGGCTCTGTCGCATGCCCCTTCTCTGTTCAGTTCGTCTGCTAGACCCTCGTTGAAGAAGCTCAAGGGCTTGTTGAGCCATGGCTTGGGGACCCTGAACTTGAGGGTGTACGGTCCATCCCAATCCACCCCGTTTGTGAAGGAGAAGACGAGGGTCATGGCTGCGAGTGCAAAACCAACCAGACAAAATCTCACTCCGATGACAACATGCTATTACATACATACAGTACTAGTAACGAATCCATGGCCACTCAGATGACAACATGCTATTACATAC ]
[-] EMBL CB683440 [ GTACGGTCCATCCCAATCCACCCCGTTTGTGAAGGAGAAGACGAGGGTCATGGCTGCGAGTGCAAAACCAACCAGACAAAATCTCACTCCGATGACAACATGCTATTACATACATACAGTACTAGTAACGAATCCATGGCCACTCAGATGACAACATGCTATTACATACATACAGTACTAGTAACGATCACTTGAACATATGGTGTCAGCATGATGCAAAAGCTTAATTTAAGTTAATGAGAAATTGCAGGCGAATCATTCATATCTTCAACGAAACAAAACAATCAGCTGCTGACCATGCTGCGGCACACGTATCCTGATGGTGTATATGGGAGGATCAGCTGATCCCCTCTCTTGCAGCGTCATCTGCCTCGGCTCACCACCGCACATGATCGGCTGGTTAAAACCACCATTAAACGCGATGCCAAACTGAGCGTTGGGGGTCATCTTGGTCGCTGCCGGGTTGTAGAAAAGGATCAGGCCCTCTCCAGCCGATGGAGGAAGACCGTTCATGGTCTTCCAGTAGACCGGCGCCTTGCCCAGCTCGAACTCCGCCCATGTCGGAAGCGAGCACTCGTTGGTCTGCGGCACGGCGGGCGCCGTGGCCGCGGCAGGCGCCGCGGCGGCGCCTGTGCGGACTACCCTGGCCGACGAGGAGGAGGAGGAGCTCCGGTGGCAGGTGATGGTCGCAGCGCTTGCCGGCCGCCGGGGACGGCGCTGGACGGCGCCGCCGCCGGTGCTCAGGCGGCTGCAGGAAGAGAGCGTGGCCATCCTACAGTATGCACT]
consensusID : consensus_14076#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 1254 fasta sequence
[TTTTTTTTTTTTTTTGATGGTATTTGTATAGGTTGATCTCTATTAAATTCAGAGTAGTTCTGTCACAAATTAACAA-CCACATTTGTATGAGGCCTACAGTTGTGTATTCTTTTCACCAAATGCAGCACACATCATTCCCTAATACCATTCTATCACACATCTGTGCTTTCTTGTACATCATACCGTGTCGCT--TCTTTCTTTTTACATTGAACAACAGTGGCCACTAATTACAGCTTCTCCTTGCTAATAAAACTCGCTGAGACTGTAGTTCAGTTCATTCCTCGGAATCGGAATCCATTGGGCATGATCCGTCATCCACGGTGGCGAGTGGATCAAACATGTGCGAGTTTGGATCCATGCACCCTGACACAATGTCCAGCTTGCAGCGATCTCCCCCCTCTTCGTAGTAGCTGCCCATCTCGCAGCTTGTGATGACAACGTTTTCGTCTGGGAAGATGGCTCTGTCGCATGCCCCTTCTCTGTTCAGTTCGTCTGCTAGACCCTCGTTGAAGAAGCTCAAGGGCTTGTTGAGCCATGGCTTGGGGACCCTGAACTTGAGGGTGTACGGTCCATCCCAATCCACCCCGTTTGTGAAGGAGAAGACGAGGGTCATGGCATGCTGCGGCACACGTATCCTGATGGTGTATATGGGAGGATCAGCTGATCCCCTCTCTTGCAGCGTCATCTGCCTCGGCTCACCACCGCACATGATCGGCTGGTTAAAACCACCATTAAACGCGATGCCAAACTGAGCGTTGGGGGTCATCTTGGTCGCTGCCGGGTTGTAGAAAAGGATCAGGCCCTCTCCAGCCG-ATGGAGGAAGACCGTTCATGGTCTTCCAGTAGACCGGCGCCTTGCCCAGCTCGAACTCCGCCCATGTCGGAAGCGAGCACTCGTTGGTCTGCGGCACGGCGGGCGCCGTGGC-CGCGGCAGGCGCCGCGGCGGCGCCTGTGCGGACTACCCTGGCCGACGAGGAGGAGGAGGAGCTCCGGTGGCAGGTGATGGTCGCAGCGCTTGCCGGCCGCCGGGGACGGCGCTGGACGGCGCCGCCGCCGGTGCTCAGGCGGCTGCAGGAAGAGAGCGTGGCCATCCTACAGTCTACACTTGTGAATTGTGATAGCTGATGAAAGAAAGAGAAGAGAATCCGAAGTGAGTTTGCGAAGGAGGCATATATAAGGATGGATCATGATATTATCGTGGATGGAGAGGTGAGGTGAGGTGAGGGGCTTGGCTGCGCGTGTGTG-GTGGTGAGGT]
[-] EMBL AU088664 [TTTTTTTTTTTTTTTGATGGTATTTGTATAGGTTGATCTCTATTAAATTCAGAGTAGTTCTGTCACAAATTAACAA CCACATTTGTATGAGGCCTACAGTTGTGTATTCTTTTCACCAAATGCAGCACACATCATTCCCTAATACCATTCTATCACACATCTGTGCTTTCTTGTACATCATACCGTGTCGCT TCTTTCTTTTTACATTGAACAACAGTGGCCACTAATTACAGCTTCTCCTTGCTAATAAAACTCGCTGAGACT ]
[+] EMBL CB667015 [ TGTATAGGGTGATCTCTATTAAATTCAGAGTAGTTCTGTCACAAATTAACAA CCACATTTGTATGAGGCCTACAGTTGTGTATTCTTTTCACCAAATGCAGCACACATCATTCCCTAATACCATTCTATCACACATCTGTGCTTTCTTGTACATCATACCGGGTCGCT TCTTTCTTTTTACATTGAACAACAGTGGCCACTAATTACAGCTTCTCCTTGCTAATAAAACTCGCTGAGACTGGAGTTCAGTTCATTCCTCGGAATCGGAATCCATTGGGCATGATCCGTCATCCACGGGGGCGAGTGGATCAAACATGTGCGAGTTTGGATCCATGCACCCTGACACAATGTCCAGCTTGCAGCGATCTCCCCCCTCTTCGTAGTAGCTGCCCATCTCGCAGCTTGTGATGACAACGTTTTCGTCTGGGAAGATGGCTCTGTCGCATGCCCCTTCTCTGTTCAGTTCGTCTGCTAAACCCTCGTTGAAAAAGCTCAAGGGCTTGTTGAGCCATGGCTTGGGGACCCTGAACTTGAGGGTGTACGGTCCATCCCAATCCACCCCGTTTGTGAAGGAGAAGACGAGGGTCATGGCATGCTGCGGCACACGTATCCTGATGGTGTATATGGGAGGATCAGCTGATCCCCTCTCTTGCAGCGTCATCTGCCTCGGCTCACCACCGCACATGATCGGCTGGTTAAAACCACCATTAAACGCGATGCCAAACTGAGCGTTGGGGG ]
[-] EMBL CA765565 [ TATAGGCTGATCACTATTAAATTCAGAGTAGTTCTGTCACAAATTANCAACCCACATTTGTATGAGGCCTACAATTGTGTATTCTTTTCACCAAATGCAGCACACATCATTCCCTAATACCATTCTATCACACATCTGTGCTTTCTTGTACATCATACCGTGTCGCTTCTCTTTCTTTTTACATTGAACAACAGTGGCCACTAATTACAGCTTCTCCTTGCTAATAAAACTCGCTGAGACTGTAGTTCAGTTCATTCCTCGGAATCGGAATCCATTGGGCATGATCCGTCATCCACGGTGGCGAGTGGATCAAACATGTGCGAGTTTGGATCCATGCACCCTGACACAATGTCCAGCTTGCAGCGATCTCCCCCCTCTTCGTAGCAGCTGCCCATCTCGCAACTTGTGATGACAACGTTTTCGTCTGGGAAGATGGCTCTGTCGCATGCCCCTTCTCTGTTCAGTTCGTCTGCTAGACCCTCGTTGAAGAAGCTCAAGGGCTTGTTGAGCCATGGCTTGGGGACCCTGAACTTGAGGGTGTACGGTCCATCCCAATCCACCCCGTTTGTGAAGGAGAAGA ]
[-] EMBL AK068097 [ TAGGTTGATCTCTATTAAATTCAGAGTAGTTCTGTCACAAATTAACAA CCACATTTGTATGAGGCCTACAGTTGTGTATTCTTTTCACCAAATGCAGCACACATCATTCCCTAATACCATTCTATCACACATCTGTGCTTTCTTGTACATCATACCGTGTCGCT TCTTTCTTTTTACATTGAACAACAGTGGCCACTAATTACAGCTTCTCCTTGCTAATAAAACTCGCTGAGACTGTAGTTCAGTTCATTCCTCGGAATCGGAATCCATTGGGCATGATCCGTCATCCACGGTGGCGAGTGGATCAAACATGTGCGAGTTTGGATCCATGCACCCTGACACAATGTCCAGCTTGCAGCGATCTCCCCCCTCTTCGTAGTAGCTGCCCATCTCGCAGCTTGTGATGACAACGTTTTCGTCTGGGAAGATGGCTCTGTCGCATGCCCCTTCTCTGTTCAGTTCGTCTGCTAGACCCTCGTTGAAGAAGCTCAAGGGCTTGTTGAGCCATGGCTTGGGGACCCTGAACTTGAGGGTGTACGGTCCATCCCAATCCACCCCGTTTGTGAAGGAGAAGACGAGGGTCATGGCATGCTGCGGCACACGTATCCTGATGGTGTATATGGGAGGATCAGCTGATCCCCTCTCTTGCAGCGTCATCTGCCTCGGCTCACCACCGCACATGATCGGCTGGTTAAAACCACCATTAAACGCGATGCCAAACTGAGCGTTGGGGGTCATCTTGGTCGCTGCCGGGTTGTAGAAAAGGATCAGGCCCTCTCCAGCCG ATGGAGGAAGACCGTTCATGGTCTTCCAGTAGACCGGCGCCTTGCCCAGCTCGAACTCCGCCCATGTCGGAAGCGAGCACTCGTTGGTCTGCGGCACGGCGGGCGCCGTGGC CGCGGCAGGCGCCGCGGCGGCGCCTGTGCGGACTACCCTGGCCGACGAGGAGGAGGAGGAGCTCCGGTGGCAGGTGATGGTCGCAGCGCTTGCCGGCCGCCGGGGACGGCGCTGGACGGCGCCGCCGCCGGTGCTCAGGCGGCTGCAGGAAGAGAGCGTGGCCATCCTACAGTCTACACTTGTGAATTGTGATAGCTGATGAAAGAAAGAGAA ]
[-] EMBL AK059901 [ ATCTCTATTAAATTCAGAGTAGTTCTGTCACAAATTAACAA CCACATTTGTATGAGGCCTACAGTTGTGTATTCTTTTCACCAAATGCAGCACACATCATTCCCTAATACCATTCTATCACACATCTGTGCTTTCTTGTACATCATACCGTGTCGCT TCTTTCTTTTTACATTGAACAACAGTGGCCACTAATTACAGCTTCTCCTTGCTAATAAAACTCGCTGAGACTGTAGTTCAGTTCATTCCTCGGAATCGGAATCCATTGGGCATGATCCGTCATCCACGGTGGCGAGTGGATCAAACATGTGCGAGTTTGGATCCATGCACCCTGACACAATGTCCAGCTTGCAGCGATCTCCCCCCTCTTCGTAGTAGCTGCCCATCTCGCAGCTTGTGATGACAACGTTTTCGTCTGGGAAGATGGCTCTGTCGCATGCCCCTTCTCTGTTCAGTTCGTCTGCTAGACCCTCGTTGAAGAAGCTCAAGGGCTTGTTGAGCCATGGCTTGGGGACCCTGAACTTGAGGGTGTACGGTCCATCCCAATCCACCCCGTTTGTGAAGGAGAAGACGAGGGTCATGGCATGCTGCGGCACACGTATCCTGATGGTGTATATGGGAGGATCAGCTGATCCCCTCTCTTGCAGCGTCATCTGCCTCGGCTCACCACCGCACATGATCGGCTGGTTAAAACCACCATTAAACGCGATGCCAAACTGAGCGTTGGGGGTCATCTTGGTCGCTGCCGGGTTGTAGAAAAGGATCAGGCCCTCTCCAGCCG ATGGAGGAAGACCGTTCATGGTCTTCCAGTAGACCGGCGCCTTGCCCAGCTCGAACTCCGCCCATGTCGGAAGCGAGCACTCGTTGGTCTGCGGCACGGCGGGCGCCGTGGC CGCGGCAGGCGCCGCGGCGGCGCCTGTGCGGACTACCCTGGCCGACGAGGAGGAGGAGGAGCTCCGGTGGCAGGTGATGGTCGCAGCGCTTGCCGGCCGCCGGGGACGGCGCTGGACGGCGCCGCCGCCGGTGCTCAGGCGGCTGCAGGAAGAGAGCGTGGCCATCCTACAGTCTACACTTGTGAATTGTGATAGCTGATGAAAGAA ]
[-] EMBL CB657914 [ GCGAGTTTGGATCCATGCACCCTGACACAATGTCCAGCTTGCAGCGATCTCCCCCCTCTTCGTAGTAGCTGCCCATCTCGCAGCTTGTGATGACAACGTTTTCGTCTGGGAAGATGGCTCTGTCGCATGCCCCTTCTCTGTTCAGTTCGTCTGCTAGACCCTCGTTGAAGAAGCTCAAGGGCTTGTTGAGCCATGGCTTGGGGACCCTGAACTTGAGGGTGTACGGTCCATCCCAATCCACCCCGTTTGTGAAGGAGAAGACGAGGGTCATGGCATGCTGCGGCACACGTATCCTGATGGTGTATATGGGAGGATCAGCTGATCCCCTCTCTTGCAGCGTCATCTGCCTCGGCTCACCACCGCACATGATCGGCTGGTTAAAACCACCATTAAACGCGATGCCAAACTGAGCGTTGGGGGTCATCTTGGTCGCTGCCGGGTTGTAGAAAAGGATCAGGCCCTCTCCAGCCG ATGGAGGAAGACCGTTCATGGTCTTCCAGTAGACCGGCGCCTTGCCCAGCTCGAACTCCGCCCATGTCGGAAGCGAGCACTCGTTGGTCTGCGGCACGGCGGGCGCCGTGGC CGCGGCAGGCGCCGCGGCGGCGCCTGTGCGGACTACCCTGGCCGACGAGGAGGAGGAGGAGCTCCGGTGGCAGGTGATGGTCGCAGCGCTTGCCGGCCGCCGGGGACGGCGCTGGACGGCGCCGCCGCCGGTGCTCAGGCGGCTGCAGGAAGAGAGCGTGGCCATCCTACAGTCAAGACT ]
[-] EMBL CB667014 [ CCATCTCGCAGCTTGTGATGACAACGTTTTCGTCTGGGAAGATGGCTCTGTCGCATGCCCCTTCTCTGTTCAGTTCGTCTGCTAGACCCTCGTTGAAGAAGCTCAAGGGCTTGTTGAGCCATGGCTTGGGGACCCTGAACTTGAGGGTGTACGGTCCATCCCAATCCACCCCGTTTGTGAAGGAGAAGACGAGGGTCATGGCATGCTGCGGCACACGTATCCTGATGGTGTATATGGGAGGATCAGCTGATCCCCTCTCTTGCAGCGTCATCTGCCTCGGCTCACCACCGCACATGATCGGCTGGTTAAAACCACCATTAAACGCGATGCCAAACTGAGCGTTGGGGGTCATCTTGGTCGCTGCCGGGTTGTAGAAAAGGATCAGGCCCTCTCCAGCCG ATGGAGGAAGACCGTTCATGGTCTTCCAGTAGACCGGCGCCTTGCCCAGCTCGAACTCCGCCCATGTCGGAAGCGAGCACTCGTTGGTCTGCGGCACGGCGGGCGCCGTGGC CGCGGCAGGCGCCGCGGCGGCGCCTGTGCGGACTACCCTGGCCGACGAGGAGGAGGAGGAGCTCCGGTGGCAGGTGATGGTCGCAGCGCTTGCCGGCCGCCGGGGACGGCGCTGGACGGCGCCGCCGCCGGTGCTCAGGCGGCTGCAGGAAGAGAGCGTGGCCATCCTACAGTC ]
[-] EMBL CB657376 [ TTTTCGTCTGGGAAGATGGCTCTGTCGCATGCCCCTTCTCTGTTCAGTTCGTCTGCTAGACCCTCGTTGAAGAAGCTCAAGGGCTTGTTGAGCCATGGCTTGGGGACCCTGAACTTGAGGGTGTACGGTCCATCCCAATCCACCCCGTTTGTGAAGGAGAAGACGAGGGTCATGGCATGCTGCGGCACACGTATCCTGATGGTGTATATGGGAGGATCAGCTGATCCCCTCTCTTGCAGCGTCATCTGCCTCGGCTCACCACCGCACATGATCGGCTGGTTAAAACCACCATTAAACGCGATGCCAAACTGAGCGTTGGGGGTCATCTTGGTCGCTGCCGGGTTGTAGAAAAGGATCAGGCCCTCTCCAGCCG ATGGAGGAAGACCGTTCATGGTCTTCCAGTAGACCGGCGCCTTGCCCAGCTCGAACTCCGCCCATGTCGGAAGCGAGCACTCGTTGGTCTGCGGCACGGCGGGCGCCGTGGC CGCGGCAGGCGCCGCGGCGGCGCCTGTGCGGACTACCCTGGCCGACGAGGAGGAGGAGGAGCTCCGGTGGCAGGTGATGGTCGCAGCGCTTGCCGGCCGCCGGGGACGGCGCTGGACGGCGCCGCCGCCGGTGCTCAGGCGGCTGCAGGAAGAGAGCGTGGCCATCCTACAGTCTACACTTGTGAATTGTGATAGCTGATGAAAGAAAGAGAAGAGAATCCGAAGTGAGTTTGCGAAGGAGGCATATATAAGGATGGATCATGATATTATCGTGGATGGAGAGGTGAGGTGAGGTGAGGGGCTTGGCTGCGCGTGTGTG GTGGTGAGGT]
[-] EMBL CA753922 [ CCCTCGTTGAAGAAGCTCAAGGGCTTGTTGAGCCATGGCTTGGGGACCCTGAACTTGAGGGTGTACGGTCCATCCCAATCCACCCCGTTTGTGAAGGAGAAGACGAGGGTCATGGCATGCTGCGGCACACGTATCCTGATGGTGTATATGGGAGGATCAGCTGATCCCCTCTCTTGCAGCGTCATCTGCCTCGGCTCACCACCGCACATGATCGGCTGGTTAAAACCACCATTAAACGCGATGCCAAACTGAGCGTTGGGGGTCATCTTGGTCGCTGCCGGGTTGTAGAAAAGGATCAGGCCCTCTCCAGCCG ATGGAGGAAGACCGTTCATGGTCTTCCAGTAGACCGGCGCCTTGCCCAGCTCGAACTCCGCCCATGTCGGAAGCGAGCACTCGTTGGTCTGCGGCACGGCGGGCGCCGTGGC CGCGGCAGGCGCCGCGGCGGCGCCTGTGCGGACTACCCTGGCCGACGAGGAGGAGGAGGAGCTCCGGTGGCAGGTGATGGTCGCAGCGCTTGCCGGCCGCCGGGGACGGCGCTGGACGGCGCCGCCGCCGGTGCTCAGGCGGCTGCAGGAAGAGAGCGTGGCCATCCTACAGTCTACA ]
[-] EMBL CB657377 [ ATCCACCCCGTTTGTGAAGGAGAAGACGAGGGTCATGGCATGCTGCGGCACACGTATCCTGATGGTGTATATGGGAGGATCAGCTGATCCCCTCTCTTGCAGCGTCATCTGCCTCGGCTCACCACCGCACATGATCGGCTGGTTAAAACCACCATTAAACGCGATGCCAAACTGAGCGTTGGGGGTCATCTTGGTCGCTGCCGGGTTGTAGAAAAGGATCAGGCCCTCTCCAGCCG ATGGAGGAAGACCGTTCATGGTCTTCCAGTAGACCGGCGCCTTGCCCAGCTCGAACTCCGCCCATGTCGGAAGCGAGCACTCGTTGGTCTGCGGCACGGCGGGCGCCGTGGC CGCGGCAGGCGCCGCGGCGGCGCCTGTGCGGACTACCCTGGCCGACGAGGAGGAGGAGGAGCTCCGGTGGCAGGTGATGGTCGCAGCGCTTGCCGGCCGCCGGGGACGGCGCTGGACGGCGCCGCCGCCGGTGCTCAGGCGGCTGCAGGAAGAGAGCGTGGCCATCCTACAGTCTACACTTGTGAATTGTGATAGCTGATGAAAGAAAGAGAAGAGAATCCGAAGTGAGTTTGCGAAGGAGGCATATATAAGGATGGATCATGATATTATCGTGGATGGAGAGGTGAGGTGAGGTGAGGGGCTTGGCTGCGCGTGTGTGAGTGGTGAGGT]
[+] EMBL AW069987 [ aagttcAGGGTCATGGCATGCTGCGGCACACGTATCCTGATGGTGTATATGGGAGGATCAGCTGATCCCCTCTCTTGCAGCGTCATCTGCCTCGGCTCACCACCGCACATGATCGGCTGGTTAAAACCACCATTAAACGCGATGCCAAACTGAGCGTTGGGGGT ACCTCGGc ]
[-] EMBL AU088665 [ nTCTCCAGCCGNATGGAGGAAGACCGTTCATGGTCTTCCAGTAGACCGGCGCATTGCCCAGCTCGAACTCCGCCCATGTCGGAAGCGAGCACTCGTTGGTCTGCGGCACGGCGGGCGCCGTTGCGCGCNGCAGGCGCCGCGGCGGCNCCTGTGCGGACTACCCTGGCCGACGAGGAGGAGGAGGAGCTCCGGTGGCAGGTGATGGTCGCAGCGCTTGCCGGCCGCCGGGGACGGCGCTGGAC GCGCCGCCGCCGGTGCTCAGGCGGCTGCAGGAAGAGAGCGTGGCCATCCTACAGTCTACACTTGTGAATTG ]
consensusID : consensus_14076#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 355 fasta sequence
[GGTCAATTTGGTNCTTCCGGGTTTTAAAAAAGGATTAAGCCTTCTCCAACCGATGGAGGAAAACCGTTCATGGTCTTCCAGTANACCGGCGCCTTGCCCAGCTCGAACTCCGCCCATGTCGGAAACGAGCACTCGTTGGTCTGCGNGCACGGCGGGCGCNCGTTNGCCCNNGNAGCGCCGCGGCGGCGCCTGTGCGGACTACCCTGGCCGACGAGGAGGAGGAGGAGCTCCGGTGGCAGGTGATGGTCGCAGCGCTTGCCGGCCGCCGGGGACGGCGCTGGNANGCGCCGCCGCCGGTGCTCAGGCGGCTGCAGGAAGAGAGCGTGGCCATCCTACAGTCTACACTTGTGAATTG]
[-] EMBL OSS12248A [GGTCAATTTGGTNCTTCCGGGTTTTAAAAAAGGATTAAGCCTTCTCCAACCGATGGAGGAAAACCGTTCATGGTCTTCCAGTANACCGGCGCCTTGCCCAGCTCGAACTCCGCCCATGTCGGAAACGAGCACTCGTTGGTCTGCGNGCACGGCGGGCGCNCGTTNGCCCNNGNAGCGCCGCGGCGGCGCCTGTGCGGACTACCCTGGCCGACGAGGAGGAGGAGGAGCTCCGGTGGCAGGTGATGGTCGCAGCGCTTGCCGGCCGCCGGGGACGGCGCTGGNANGCGCCGCCGCCGGTGCTCAGGCGGCTGCAGGAAGAGAGCGTGGCCATCCTACAGTCTACACTTGTGAATTG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_14076#1 TTTTTTTTTTTTTTTGATGGTATTTGTATAGGTTGATCTCTATTAAATTCAGAGTAGTTC 60
consensus_14076#2 ------------------------------------------------------------
consensus_14076#0 ------------TCTTTTAATTTTTGGATAGGGTGATCTCTATTAAATTCAGACTAGTTC 48
consensus_14076#1 TGTCACAAATTAACAACCACATTTGTATGAGGCCTACAGTTGTGTATTCTTTTCACCAAA 120
consensus_14076#2 ------------------------------------------------------------
consensus_14076#0 TGTCACAAATTAACAACCACATTTGTATGAGGCCTACAGTTGTGTATTCTTTTCACCAAA 108
consensus_14076#1 TGCAGCACACATCATTCCCTAATACCATTCTATCACACATCTGTGCTTTCTTGTACATCA 180
consensus_14076#2 ------------------------------------------------------------
consensus_14076#0 TGCAGCACACATCATTCCCTAATACCATTCTATCACACATCTGTGCTTTCTTGTACATCA 168
consensus_14076#1 TACCGTGTCGCTTCTTTCTTTTTACATTGAACAACAGTGGCCACTAATTACAGCTTCTCC 240
consensus_14076#2 ------------------------------------------------------------
consensus_14076#0 TACCGTGTCGCTTCTTTCTTTTTACATTGAACAACAGTGGCCACTAATTACAGCTTCTCC 228
consensus_14076#1 TTGCTAATAAAACTCGCTGAGACTGTAGTTCAGTTCATTCCTCGGAATCGGAATCCATTG 300
consensus_14076#2 ------------------------------------------------------------
consensus_14076#0 TTGCTAATAAAACTCGCTGAGACTGTAGTTCAGTTCATTCCTCGGAATCGGAATCCATTG 288
consensus_14076#1 GGCATGATCCGTCATCCACGGTGGCGAGTGGATCAAACATGTGCGAGTTTGGATCCATGC 360
consensus_14076#2 ------------------------------------------------------------
consensus_14076#0 GGCATGATCCGTCATCCACGGTGGCGAGTGGATCAAACATGTGCGAGTTTGGATCCATGC 348
consensus_14076#1 ACCCTGACACAATGTCCAGCTTGCAGCGATCTCCCCCCTCTTCGTAGTAGCTGCCCATCT 420
consensus_14076#2 ------------------------------------------------------------
consensus_14076#0 ACCCTGACACAATGTCCAGCTTGCAGCGATCTCCCCCCTCTTCGTAGTAGCTGCCCATCT 408
consensus_14076#1 CGCAGCTTGTGATGACAACGTTTTCGTCTGGGAAGATGGCTCTGTCGCATGCCCCTTCTC 480
consensus_14076#2 ------------------------------------------------------------
consensus_14076#0 CGCAGCTTGTGATGACAACGTTTTCGTCTGGGAAGATGGCTCTGTCGCATGCCCCTTCTC 468
consensus_14076#1 TGTTCAGTTCGTCTGCTAGACCCTCGTTGAAGAAGCTCAAGGGCTTGTTGAGCCATGGCT 540
consensus_14076#2 ------------------------------------------------------------
consensus_14076#0 TGTTCAGTTCGTCTGCTAGACCCTCGTTGAAGAAGCTCAAGGGCTTGTTGAGCCATGGCT 528
consensus_14076#1 TGGGGACCCTGAACTTGAGGGTGTACGGTCCATCCCAATCCACCCCGTTTGTGAAGGAGA 600
consensus_14076#2 ------------------------------------------------------------
consensus_14076#0 TGGGGACCCTGAACTTGAGGGTGTACGGTCCATCCCAATCCACCCCGTTTGTGAAGGAGA 588
consensus_14076#1 AGACGAGGGTCATGGC-------------------------------------------- 616
consensus_14076#2 ------------------------------------------------------------
consensus_14076#0 AGACGAGGGTCATGGCTGCGAGTGCAAAACCAACCAGACAAAATCTCACTCCGATGACAA 648
consensus_14076#1 ------------------------------------------------------------
consensus_14076#2 ------------------------------------------------------------
consensus_14076#0 CATGCTATTACATACATACAGTACTAGTAACGAATCCATGGCCACTCAGATGACAACATG 708
consensus_14076#1 ------------------------------------------------------------
consensus_14076#2 ------------------------------------------------------------
consensus_14076#0 CTATTACATACATACAGTACTAGTAACGATCACTTGAACATATGGTGTCAGCATGATGCA 768
consensus_14076#1 ------------------------------------------------------------
consensus_14076#2 ------------------------------------------------------------
consensus_14076#0 AAAGCTTAATTTAAGTTAATGAGAAATTGCAGGCGAATCATTCATATCTTCAACGAAACA 828
consensus_14076#1 -------------------ATGCTGCGGCACACGTATCCTGATGGTGTATATGGGAGGAT 657
consensus_14076#2 ------------------------------------------------------------
consensus_14076#0 AAACAATCAGCTGCTGACCATGCTGCGGCACACGTATCCTGATGGTGTATATGGGAGGAT 888
consensus_14076#1 CAGCTGATCCCCTCTCTTGCAGCGTCATCTGCCTCGGCTCACCACCGCACATGATCGGCT 717
consensus_14076#2 ------------------------------------------------------------
consensus_14076#0 CAGCTGATCCCCTCTCTTGCAGCGTCATCTGCCTCGGCTCACCACCGCACATGATCGGCT 948
consensus_14076#1 GGTTAAAACCACCATTAAACGCGATGCCAAACTGAGCGTTGGGGGTCATCTTGGTCGCTG 777
consensus_14076#2 -------------------------------------------GGTCAATTTGGTN-CTT 16
consensus_14076#0 GGTTAAAACCACCATTAAACGCGATGCCAAACTGAGCGTTGGGGGTCATCTTGGTCGCTG 1008
***** ***** **
consensus_14076#1 CCGGGTTGTAGAAAAGGATCAGGCCCTCTCCAGCCGATGGAGGAAGACCGTTCATGGTCT 837
consensus_14076#2 CCGGGTTTTAAAAAAGGATTAAGCCTTCTCCAACCGATGGAGGAAAACCGTTCATGGTCT 76
consensus_14076#0 CCGGGTTGTAGAAAAGGATCAGGCCCTCTCCAGCCGATGGAGGAAGACCGTTCATGGTCT 1068
******* ** ******** * *** ****** ************ **************
consensus_14076#1 TCCAGTAGACCGGCGCCTTGCCCAGCTCGAACTCCGCCCATGTCGGAAGCGAGCACTCGT 897
consensus_14076#2 TCCAGTANACCGGCGCCTTGCCCAGCTCGAACTCCGCCCATGTCGGAAACGAGCACTCGT 136
consensus_14076#0 TCCAGTAGACCGGCGCCTTGCCCAGCTCGAACTCCGCCCATGTCGGAAGCGAGCACTCGT 1128
******* **************************************** ***********
consensus_14076#1 TGGTCTGCGG-CACGGCGGGCGCC-GTGGCCGCGGCAGGCGCCGCGGCGGCGCCTGTGCG 955
consensus_14076#2 TGGTCTGCGNGCACGGCGGGCGCNCGTTNGCCCNNGNAGCGCCGCGGCGGCGCCTGTGCG 196
consensus_14076#0 TGGTCTGCGG-CACGGCGGGCGCC-GTGGCCGCGGCAGGCGCCGCGGCGGCGCCTGTGCG 1186
********* ************ ** * * **********************
consensus_14076#1 GACTACCCTGGCCGACGAGGAGGAGGAGGAGCTCCGGTGGCAGGTGATGGTCGCAGCGCT 1015
consensus_14076#2 GACTACCCTGGCCGACGAGGAGGAGGAGGAGCTCCGGTGGCAGGTGATGGTCGCAGCGCT 256
consensus_14076#0 GACTACCCTGGCCGACGAGGAGGAGGAGGAGCTCCGGTGGCAGGTGATGGTCGCAGCGCT 1246
************************************************************
consensus_14076#1 TGCCGGCCGCCGGGGACGGCGCTGGACGGCGCCGCCGCCGGTGCTCAGGCGGCTGCAGGA 1075
consensus_14076#2 TGCCGGCCGCCGGGGACGGCGCTGGNANGCGCCGCCGCCGGTGCTCAGGCGGCTGCAGGA 316
consensus_14076#0 TGCCGGCCGCCGGGGACGGCGCTGGACGGCGCCGCCGCCGGTGCTCAGGCGGCTGCAGGA 1306
************************* ********************************
consensus_14076#1 AGAGAGCGTGGCCATCCTACAGTCTACACTTGTGAATTGTGATAGCTGATGAAAGAAAGA 1135
consensus_14076#2 AGAGAGCGTGGCCATCCTACAGTCTACACTTGTGAATTG--------------------- 355
consensus_14076#0 AGAGAGCGTGGCCATCCTACAGTATGCACT------------------------------ 1336
*********************** * ****
consensus_14076#1 GAAGAGAATCCGAAGTGAGTTTGCGAAGGAGGCATATATAAGGATGGATCATGATATTAT 1195
consensus_14076#2 ------------------------------------------------------------
consensus_14076#0 ------------------------------------------------------------
consensus_14076#1 CGTGGATGGAGAGGTGAGGTGAGGTGAGGGGCTTGGCTGCGCGTGTGTGGTGGTGAGGT 1254
consensus_14076#2 -----------------------------------------------------------
consensus_14076#0 -----------------------------------------------------------
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||