cluster # 14086

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Oryza sativa
cluster # 14086 cluster # 14086 Sequences # 15 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_14086#0 length = 1942 sequences # 13

consensus_14086#1 length = 429 sequences # 2

consensusID : consensus_14086#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 13
consensus length = 1942
fasta sequence

                              [TCTCTTCTCAACTCGACGGCCATCTTCTTCTTTCTCTCTCCACTCCGTCGCCGCCCCTTGGCCTCCCTCAACGGCCACCGCGCCCCTCCTCCGCCGCCAAATCGCACCCAACCCCTTCCCCTTTAAACTATTCCACCTATAAGGCCGCGCCGCCGCCGCCGACGAGAGAGACGGCCATGACCTC--AGGTGGCCGTAGCTCTCCGGCGGAAGGCGGCGGAGATGGCTTCCACGGCCGCGGCGGCGTCGTCGCAGGGGTGCATCTCGTGGGCGCTGCGGCAGCGTGGGCTTGGTGGTGGTGGTGCGCGGGCTGTCCCGGTGCTTCCCCGCCGGAGATTCTGCGTCTCCGCGGCGGCGGGTGCGGGGTTCGACAACGAGAATCGCGAGTATGTGATCGTGGGTGGAGGCAACGCGGCCGGTTACGCGGCGAGGACGTTCGTCGAGCACGGCATGGCTGATGGCCGCCTTTGCATCGTCTCCAAGGAGGCGTATCCGCCATATGAGCGACCAGCACTGACAAAGGGCTATCTTTTCCCTCCAGACAAGAAGCCTGCTCGTCTACCTGGCTTTCATACCTG-TGTTGGATCAGGTGGGCAGAGGCAGACTGCTGAATGGTACAAGGAGAACGGCATAGAGGTATTGTATGAGGATCCAGTTGTAGCGTTTGATGGCAAAACACATACCTTAAAAACTTCATCAGGGAAAATTCTGAAGTATGGGTCACTTATTATTTCTACTGGCTGTGAAGCTTCAAGGTTACCTGCTAAGATTGGAGGAAATTTGCCTGGAGTTCACTATATACGTGATGTTGCTGATGCGGATTCTCTAGTATCTTCATTGGGAAAAGCAAAGAAAATTGTTGTTATTGGTGGGGGCTATATTGGCATGGAGGTAGCAGCAGCAGCTTGTGGCTGGAATCTCGACACAACTATTATATTCCCAGAGGACCACATTATGCCAAGACTCTTTACACCTTCCCTTGCTAAGAAGTATGAGGAACTGTATCAGCAAAATGGTGTCAAATTCATTAAGGGAGCTCTTATTGATAAACTTGAAGCTGGCTCTGATGGTAGGGTGTCATCTGCAGTACTTGAAGATGGATCTGTAGTTGAAGCTGATACAGTTATTGTTGGTATAGGAGCAAGACCAGTTATTGGCCCATTTGAAGCTGTTGGGGTCAACACTAAAGTTGGTGGAATAGAGGTTGATTCCTTGTTTAGAACTAGTATACCTGGTATCTTTGCTATTGGAGATGTAGCAGCTTTTCCCCTCAAGATGTATGATAGAATGACTCGAGTTGAGCATGTGGATCATGCTCGGAAGTCTGCACACCACTGTGTTGAAGCACTCCTAACATCACACACAAAGCCGTATGACTACCTTCCATATTTCTATTCAAGAGTTTTTGAGTACGAAGGAAGTTCAAGGAAAATTTGGTGGCAATTTTACGGTGATAATGTTGGCGAAACAATTGAAGTGGGAAGCTTTGAACCAAAGATTGCTACCTTCTGGATTGACTCTGATAGTCGACTGAAGGGTGTTTTCCTTGAGAGTGGTAGCTCAGAGGAATTTTCGCTTCTTCCTCAACTCGCTAAGTCTCAGCCCGTTGTAGACAAAGCTAAGCTCAAAAGTGCAACCTCTGTCGAGGATGCCTTAGAGATCGCAAGAAGCTCTCTCCACTCTGGTTCTTCTGTTTAGCTCTCAAGCATCTAGAAAAATTCAGTTTGTGTCCTGTTACATCTTTTAAAACACCGAGACTTCAACAATAATTCTCCACAATCCCACGGCATTCGTTTATGCGGGATTGTAAAATTCTTAGATGTACCTAC-GTTCGCATTTCCAATTTGAAATAAACTTGGTTGCCCTTTGAGGGGTTTGATAAAGATATGATAATGAAA-CCCATGGAATGTTACTTTCTCTAAAAAAGGAGGGGGGGGGGTGGGCA]

[+] EMBL AK099848             [TCTCTTCTCAACTCGACGGCCATCTTCTTCTTTCTCTCTCCACTCCGTCGCCGCCCCTTGGCCTCCCTCAACGGCCACCGCGCCCCTCCTCCGCCGCCAAATCGCACCCAACCCCTTCCCCTTTAAACTATTCCACCTATAAGGCCGCGCCGCCGCCGCCGACGAGAGAGACGGCCATGACCTC  AGGTGGCCGTAGCTCTCCGGCGGAAGGCGGCGGAGATGGCTTCCACGGCCGCGGCGGCGTCGTCGCAGGGGTGCATCTCGTGGGCGCTGCGGCAGCGTGGGCTTGGTGGTGGTGGTGCGCGGGCTGTCCCGGTGCTTCCCCGCCGGAGATTCTGCGTCTCCGCGGCGGCGGGTGCGGGGTTCGACAACGAGAATCGCGAGTATGTGATCGTGGGTGGAGGCAACGCGGCCGGTTACGCGGCGAGGACGTTCGTCGAGCACGGCATGGCTGATGGCCGCCTTTGCATCGTCTCCAAGGAGGCGTATCCGCCATATGAGCGACCAGCACTGACAAAGGGCTATCTTTTCCCTCCAGACAAGAAGCCTGCTCGTCTACCTGGCTTTCATACCTG TGTTGGATCAGGTGGGCAGAGGCAGACTGCTGAATGGTACAAGGAGAACGGCATAGAGGTATTGTATGAGGATCCAGTTGTAGCGTTTGATGGCAAAACACATACCTTAAAAACTTCATCAGGGAAAATTCTGAAGTATGGGTCACTTATTATTTCTACTGGCTGTGAAGCTTCAAGGTTACCTGCTAAGATTGGAGGAAATTTGCCTGGAGTTCACTATATACGTGATGTTGCTGATGCGGATTCTCTAGTATCTTCATTGGGAAAAGCAAAGAAAATTGTTGTTATTGGTGGGGGCTATATTGGCATGGAGGTAGCAGCAGCAGCTTGTGGCTGGAATCTCGACACAACTATTATATTCCCAGAGGACCACATTATGCCAAGACTCTTTACACCTTCCCTTGCTAAGAAGTATGAGGAACTGTATCAGCAAAATGGTGTCAAATTCATTAAGGGAGCTCTTATTGATAAACTTGAAGCTGGCTCTGATGGTAGGGTGTCATCTGCAGTACTTGAAGATGGATCTGTAGTTGAAGCTGATACAGTTATTGTTGGTATAGGAGCAAGACCAGTTATTGGCCCATTTGAAGCTGTTGGGGTCAACACTAAAGTTGGTGGAATAGAGGTTGATTCCTTGTTTAGAACTAGTATACCTGGTATCTTTGCTATTGGAGATGTAGCAGCTTTTCCCCTCAAGATGTATGATAGAATGACTCGAGTTGAGCATGTGGATCATGCTCGGAAGTCTGCACACCACTGTGTTGAAGCACTCCTAACATCACACACATAGCCGTATGACTACCTTCCATATTTCTATTCAAGAGTTTTTGAGTACGAAGGAAGTTCAAGGAAAATTTGGTGGCAATTTTACGGTGATAATGTTGGCGAAACAATTGAAGTGGGAAGCTTTGAACCAAAGATTGCTACCTTCTGGATTGACTCTGATAGTCGACTGAAGGGTGTTTTCCTTGAGAGTGGTAGCTCAGAGGAATTTTCGCTTCTTCCTCAACTCGCTAAGTCTCAGCCCGTTGTAGACAAAGCTAAGCTCAAAAGTGCAACCTCTGTCGAGGATGCCTTAGAGATCGCAAGAAGCTCTCTCCACTCTGGTTCTTCTGTTTAGCTCTCAAGCATCTAGAAAAATTCAGTTTGTGTCCTGTTACATCTTTTAAAACACCGAGACTTCAACAATAATTCTCCACAATCCCACGGCATTCGTTTATGCGGGATTGTAAAATTCTTAGATGTACCTAC GTTCGCATTTCCAATTTGAAATAAACTTGGTTGCCCTTTGAGGGGTTTGATAAAGATATGATAATGAAA CCCATGGAATGTTACTTTCTCT                         ]
[+] EMBL CB648016             [       TCAACTCCACGGCCATCTTCTTCTTTCTCTCTCCACTCCGTCGCCGCCCCTTGGCCTCCCTCAACGGCCACCGCGCCCCTCCTCCGCCGCCAAATCGCACCCAACCCCTTCCCCTTTAAACTATTCCACCTATAAGGCCGCGCCGCCGCCGCCGACGAGAGAGACGGCCATGACCTCAGAGGTGGCCGTAGCTCTCCGGCGGAAGGCGGCGGAGATGGCTTCCACGGCCGCGGCGGCGTCGTCGCAGGGGTGCATCTCGTGGGCGCTGCGGCAGCGTGGGCTTGGTGGTGGTGGTGCGCGGGCTGTCCCGGTGCTTCCCCGCCGGAGATTCTGCGTCTCCGCGGCGGCGGGTGCGGGGTTCGACAACGAGAATCGCGAGTATGTGATCGTGGGTGGAGGCAACGCGGCCGGTTACGCGGCGAGGACGTTCGTCGAGCACGGCATGGCTGATGGCCGCCTTTGCATCGTCTCCAAGGAGGCGTATCCGCCATATGAGCGACCAGCACTGACAAAGGGCTATCTTTTCCCTCCAGACAAGAAGCCTGCTCGTCTACCTGGCTTTCATACCTG TGTTGGATCAGGTGGGCAGAGGCAGACTGCTGAATGGTACAAGGAGAACGGCATAGAGGTATTGTATGAGGATCCAGTTGTAGCGTTTGATGGCAAAACACATACCTTAAAAACTTCATCAGGGAAAATTCTGAAGTATGGGTCACTTATTATTTCTACTGGCTGTGAAGCTTCAAGGTTACCTGCTAAGATTGGAGGAAATTTGCCTGGAGTTCACTATATACGTGATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL C26662               [                                                                                                                                                                                                                                                                                                                                                                                                      ntncgGTGGGTGGAGGCAACGCGGCCGGTTACGCGGCGAGGACGTTCGTCGAGCACGGCATGGCTGATGGCCGCCTTTNCATCGTCTTCAAGGAGGCGTATCCNCCATATNANCGACCAGNACTGACAAAGGGCTATCTTTNCCCTCCAGACAAGAAGCCTGCTCGTCTACCTGGCTTTNATACCTG TTTTGGATCAGGTGGGCAGAGGCAGACTGCTGAATGGTACAAGGAGAACGGCATAGAGGTATTGTATGAGGATCCAGTTGTAGCGTTTAATGGCAAAACACATACCTTAAAANCTTCATCAGGGAAAATCCTGAAGTATGGGTCACTTAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CB645925             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ATACCTGCTGTTGGATCAGGTGGGCAGAGGCAGACTGCTGAATGGTACAAGGAGAACGGCATAGAGGTATTGTATGAGGATCCAGTTGTAGCGTTTGATGGCAAAACACATACCTTAAAAACTTCATCAGGGAAAATTCTGAAGTATGGGTCACTTATTATTTCTACTGGCTGTGAAGCTTCAAGGTTACCTGCTAAGATTGGAGGAAATTTGCCTGGAGTTCACTATATACGTGATGTTGCTGATGCGGATTCTCTAGTATCTTCATTGGGAAAAGCAAAGAAAATTGTTGTTATTGGTGGGGGCTATATTGGCATGGAGGTAGCAGCAGCAGCTTGTGGCTGGAATCTCGACACAACTATTATATTCCCAGAGGACCACATTATGCCAAGACTCTTTACACCTTCCCTTGCTAAGAAGTATGAGGAACTGTATCAGCAAAATGGTGTCAAATTCATTAAGGGAGCTCTTATTGATAAACTTGAAGCTGGCTCTGATGGTAGGGTGTCATCTGCAGTACTTGAAGATGGATCTGTAGTTGAAGCTGATACAGTTATTGTTGGTATAGGAGCAAGACCAGTTATTGGCCCATTTGAAGCTGTTGGGGTCAACACTAAAGTTGGTGGAATAGAGGTTGATTCCTTGTTTAGAACTAGTATACCTGGTATCTTTGCTATTGGAGATGTAGCAGCTTTTCCCCTCAAGATGTATGATAGAATGACTCGAGTTGAGCATGTGGATCATGCTCGGAAGTCTGCACACCACTGTGTTGAAGCACTCCTAACATCACACACAAAGCCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CB645926             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TGTCATCTGCAGTACTTGAAGATGGATCTGTAGTTGAAGCTGATACAGTTATTGTTGGTATAGGAGCAAGACCAGTTATTGGCCCATTTGAAGCTGTTGGGGTCAACACTAAAGTTGGTGGAATAGAGGTTGATTCCTTGTTTAGAACTAGTATACCTGGTATCTTTGCTATTGGAGATGTAGCAGCTTTTCCCCTCAAGATGTATGATAGAATGACTCGAGTTGAGCATGTGGATCATGCTCGGAAGTCTGCACACCACTGTGTTGAAGCACTCCTAACATCACACACAAAGCCGTATGACTACCTTCCATATTTCTATTCAAGAGTTTTTGAGTACGAAGGAAGTTCAAGGAAAATTTGGTGGCAATTTTACGGTGATAATGTTGGCGAAACAATTGAAGTGGGAAGCTTTGAACCAAAGATTGCTACCTTCTGGATTGACTCTGATAGTCGACTGAAGGGTGTTTTCCTTGAGAGTGGTAGCTCAGAGGAATTTTCGCTTCTTCCTCAACTCGCTAAGTCTCAGCCCGTTGTAGACAAAGCTAAGCTCAAAAGTGCAACCTCTGTCGAGGATGCCTTAGAGATCGCAAGAAGCTCTCTCCACTCTGGTTCTTCTGTTTAGCTCTCAAGCATCTAGAAAAATTCAGTTTGTGTCCTGTTACATCTTTTAAAACACCGAGACTTCAACAATAATTCTCCACAATCCCACGGCATTCGTTTATGCGGGATTGTAAAATTCTTAGATGTACCTAC GTTCGCATTTCCAATTTAAGATAAACTTGGTTGCCCTTTGAG                                                                           ]
[-] EMBL CB648017             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GACCAGTTATTGGCCCATTTGAAGCTGTTGGGGTCAACACTAAAGTTGGTGGAATAGAGGTTGATTCCTTGTTTAGAACTAGTATACCTGGTATCTTTGCTATTGGAGATGTAGCAGCTTTTCCCCTCAAGATGTATGATAGAATGACTCGAGTTGAGCATGTGGATCATGCTCGGAAGTCTGCACACCACTGTGTTGAAGCACTCCTAACATCACACACAAAGCCGTATGACTACCTTCCATATTTCTATTCAAGAGTTTTTGAGTACGAAGGAAGTTCAAGGAAAATTTGGTGGCAATTTTACGGTGATAATGTTGGCGAAACAATTGAAGTGGGAAGCTTTGAACCAAAGATTGCTACCTTCTGGATTGACTCTGATAGTCGACTGAAGGGTGTTTTCCTTGAGAGTGGTAGCTCAGAGGAATTTTCGCTTCTTCCTCAACTCGCTAAGTCTCAGCCCGTTGTAGACAAAGCTAAGCTCAAAAGTGCAACCTCTGTCGAGGATGCCTTAGAGATCGCAAGAAGCTCTCTCCACTCTGGTTCTTCTGTTTAGCTCTCAAGCATCTAGAAAAATTCAGTTTGTGTCCTGTTACATCTTTTAAAACACCGAGACTTCAACAATAATTCTCCACAATCCCACGGCATTCGTTTATGCGGGATTGTAAAATTCTTAGATGTACCTAC GTTCGCATTTCCAATTTGAAATAAACTTGGTTGCCCTTTGAGGGGTTTGATAAAGAGATGATAATGAAA CCCATGGAATGTTACTTTCAAAAAAAAAGGA                ]
[-] EMBL CB648352             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TGATTCCTTGTTTAGAACTAGTATACCTGGTATCTTTGCTATTGGAGATGTAGCAGCTTTTCCCCTCAAGATGTATGATAGAATGACTCGAGTTGAGCATGTGGATCATGCTCGGAAGTCTGCACACCACTGTGTTGAAGCACTCCTAACATCACACACAAAGCCGTATGACTACCTTCCATATTTCTATTCAAGAGTTTTTGAGTACGAAGGAAGTTCAAGGAAAATTTGGTGGCAATTTTACGGTGATAATGTTGGCGAAACAATTGAAGTGGGAAGCTTTGAACCAAAGATTGCTACCTTCTGGATTGACTCTGATAGTCGACTGAAGGGTGTTTTCCTTGAGAGTGGTAGCTCAGAGGAATTTTCGCTTCTTCCTCAACTCGCTAAGTCTCAGCCCGTTGTAGACAAAGCTAAGCTCAAAAGTGCAACCTCTGTCGAGGATGCCTTAGAGATCGCAAGAAGCTCTCTCCACTCTGGTTCTTCTGTTTAGCTCTCAAGCATCTAGAAAAATTCAGTTTGTGTCCTGTTACATCTTTTAAAACACCGAGACTTCAACAATAATTCTCCACAATCCCACGGCATTCGTTTATGCGGGATTGTAAAATTCTTAGATGTACCTAC GTTCGCATTTCCAATTTGAAATAAACTTGGTTGCCCTTTGAGGGGTTTGATAAAGAGATGATAATGAAACCCCATGGAATGTTACTTTCa                           ]
[+] EMBL AU030696             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TATCTTTGCTATTGGAGATGTAGCAGCTTTTCCCCTCAAGATGTATGATAGAATGACTCGAGTTGAGCA GTGGATCATGCTCGGAAGTCTGCACACCACTGTGTTGAAGCACTCCTAACATCACACACAAAGCCGTATGACTACCTTCCATATTTCTATTCAAGAGTTTTTGAGTACGAAGGAAGTTCAAGGAAAATTTGGTGGCAATTTTACGGTGATAATGTTGGCGAAACAATTGAAGTGGGAAGCTTTGAACCAAAGATTGCTACCTTCTGGATTGACTCTGATAGTCGACTGAAGGGTGTTTTCCTTGAGAGTGGTAGCTCAGAGGAATTTTCGCTTCTTCCTCAACTCGCTAAGTCTCAGCCCGTTGTAGACAAAGCTAAGCTCAAAAGTGCAACCTCTGTCGAGGATGCCTTAGAGATCGCAAGAAGCTCTCTCCACTCTGGTTCTTCTGTTTAGCTCTCAAGCATCTAGAAAAATTCAGTTTGTGTCCTGTTACATCTTTTAAAACACCGAGACTTCAACAATAATTCTCCACAATCCCACGGCATTCGTTTATGCGGGATTGTAAAATTCTTAGATGTACCTAC GTTCGCATTTCCAATTTGAAATAAACTTGGTTGCCCTTTGAGGGGTTTGATAAAGATATGATAATGAAA CCCATGGAATGTTAaaaa                             ]
[+] EMBL CA999341             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TGGCGAAACAATTGAAGTGGGAAGCTTTGAACCAAAGATTGCTACCTTCTGGATTGACTCTGATAGTCGACTGAAGGGTGTTTTCCTTGAGAGTGGTAGCTCAGAGGAATTTTCGCTTCTTCCTCAACTCGCTAAGTCTCAGCCCGTTGTAGACAAAGCTAAGCTCAAAAGTGCAACCTCTGTCGAGGATGCCTTAGAGATCGCAAGAAGCTCTCTCCACTCTGGTTCTTCTGTTTAGCTCTCAAGCATCTAGAAAAATTCAGTTTGTGTCCTGTTACATCTTTTAAAACACCGAGACTTCAACAATAATTCTCCACAATCCCACGGCATTCGTTTATGCGGGATTGTAAAATTCTTAGATGTA                                                                                                                           ]
[+] EMBL AU166488             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TTTGAACCAAAGATTGCTACCTTCTGGATTGACTCTGATAGTCGACTGAAGGGTGTTTTCCTTGAGAGTGGTAGCTCAGAGGAATTTTCGCTTCTTCCTCAACTCGCTAAGTCTCAGCCCGTTGTAGACAAAGCTAAGCTCAAAAGTGCAACCTCTGTCGAGGATGCCTTAGAGATCGCAAGAAGCTCTCTCCACTCTGGTTCTTCTGTTTAGCTCTCAAGCATCTAGAAAAATTCAGTTTGTGTCCTGTTACATCTTTTAAAACACCGAGACTTCAACAATAATTCTCCACAATCCCACGGCATTCGTTTATGCGGGATTGTAAAATTCTTAGATGTACCTACNGTTCGCATTTCCAATTTGAAATAAACTTGGTTGCCCTTTGAGGGGTTTGATAAAGATATGATAATGAAA CCCATGGAATGTTACTTTCTCTCAAAAAa                  ]
[-] EMBL BI306601             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            aggctcTGTTTTCCTTGAGAGTGGTAGCTCAGAGGAATTTTCGCTTCTTCCTCAACTCGCTAAGTCTCAGCCCGTTGTAGACAAAGCTAAGCTCAAAAGTGCAACCTCTGTCGAGGATGCCTTAGAGATCGCAAGAAGCTCTCTCCACTCTGGTTCTTCTGTTTAGCTCTCAAGCATCTAGAAAAATTCAGTTTGTGTCCTGTTACATCTTTTAAAACACCGAGACTTCAACAATAATTCTCCACAATCCCACGGCATTCGTTTATGCGGGATTGTAAAATTTTTAGATGTACCTAC GTTCGCATTTCCAGTTTGAAATAAACTTGGTTGCCCTTTGAGGGGTTTGATAAAGATATGATAATGAAA CCCATGGAATGTTACTTTCTC AAAAAAGGGGGGGGGGGGGTGGGCA]
[+] EMBL AU075783             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   AAGCTCTCTCCACTCTGGTTCTTCTGTTTAGCTCTCAAGCATCTAGAAAAATTCAGTTTGTGTCCTGTTACATCTTTTAAAACACCGAGACTTCAACAATAATTCTCCACAATCCCACGGNATTCGTTTATGCGGGATTGTAAAATTCTTAGATGTACCTAC GTTCGNATTTCCAATTTGANATAAACTTGGTTGCCCTTTGAGGNGTTTGATAAAGATATGATAATGAAA CCCATGGNATGTTAaaaa                             ]
[+] EMBL CF291497             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   AAATTCAGTTTGTGTCCTGTTACATCTTTTAAAACACCGAGACTTCAACAATAATTCTCCACAATCCCACGGCATTCGTTTATGCGGGATTGTAAAATTCTTAGATGTACCTAC GTTCGCATTTCCAATTTGAAATAAACTTGGTTGCCCTTTGAGGGGTTTGATAAAGATAaaaaa                                                      ]




>consensus_14086#0
TCTCTTCTCAACTCGACGGCCATCTTCTTCTTTCTCTCTCCACTCCGTCGCCGCCCCTTG
GCCTCCCTCAACGGCCACCGCGCCCCTCCTCCGCCGCCAAATCGCACCCAACCCCTTCCC
CTTTAAACTATTCCACCTATAAGGCCGCGCCGCCGCCGCCGACGAGAGAGACGGCCATGA
CCTCAGGTGGCCGTAGCTCTCCGGCGGAAGGCGGCGGAGATGGCTTCCACGGCCGCGGCG
GCGTCGTCGCAGGGGTGCATCTCGTGGGCGCTGCGGCAGCGTGGGCTTGGTGGTGGTGGT
GCGCGGGCTGTCCCGGTGCTTCCCCGCCGGAGATTCTGCGTCTCCGCGGCGGCGGGTGCG
GGGTTCGACAACGAGAATCGCGAGTATGTGATCGTGGGTGGAGGCAACGCGGCCGGTTAC
GCGGCGAGGACGTTCGTCGAGCACGGCATGGCTGATGGCCGCCTTTGCATCGTCTCCAAG
GAGGCGTATCCGCCATATGAGCGACCAGCACTGACAAAGGGCTATCTTTTCCCTCCAGAC
AAGAAGCCTGCTCGTCTACCTGGCTTTCATACCTGTGTTGGATCAGGTGGGCAGAGGCAG
ACTGCTGAATGGTACAAGGAGAACGGCATAGAGGTATTGTATGAGGATCCAGTTGTAGCG
TTTGATGGCAAAACACATACCTTAAAAACTTCATCAGGGAAAATTCTGAAGTATGGGTCA
CTTATTATTTCTACTGGCTGTGAAGCTTCAAGGTTACCTGCTAAGATTGGAGGAAATTTG
CCTGGAGTTCACTATATACGTGATGTTGCTGATGCGGATTCTCTAGTATCTTCATTGGGA
AAAGCAAAGAAAATTGTTGTTATTGGTGGGGGCTATATTGGCATGGAGGTAGCAGCAGCA
GCTTGTGGCTGGAATCTCGACACAACTATTATATTCCCAGAGGACCACATTATGCCAAGA
CTCTTTACACCTTCCCTTGCTAAGAAGTATGAGGAACTGTATCAGCAAAATGGTGTCAAA
TTCATTAAGGGAGCTCTTATTGATAAACTTGAAGCTGGCTCTGATGGTAGGGTGTCATCT
GCAGTACTTGAAGATGGATCTGTAGTTGAAGCTGATACAGTTATTGTTGGTATAGGAGCA
AGACCAGTTATTGGCCCATTTGAAGCTGTTGGGGTCAACACTAAAGTTGGTGGAATAGAG
GTTGATTCCTTGTTTAGAACTAGTATACCTGGTATCTTTGCTATTGGAGATGTAGCAGCT
TTTCCCCTCAAGATGTATGATAGAATGACTCGAGTTGAGCATGTGGATCATGCTCGGAAG
TCTGCACACCACTGTGTTGAAGCACTCCTAACATCACACACAAAGCCGTATGACTACCTT
CCATATTTCTATTCAAGAGTTTTTGAGTACGAAGGAAGTTCAAGGAAAATTTGGTGGCAA
TTTTACGGTGATAATGTTGGCGAAACAATTGAAGTGGGAAGCTTTGAACCAAAGATTGCT
ACCTTCTGGATTGACTCTGATAGTCGACTGAAGGGTGTTTTCCTTGAGAGTGGTAGCTCA
GAGGAATTTTCGCTTCTTCCTCAACTCGCTAAGTCTCAGCCCGTTGTAGACAAAGCTAAG
CTCAAAAGTGCAACCTCTGTCGAGGATGCCTTAGAGATCGCAAGAAGCTCTCTCCACTCT
GGTTCTTCTGTTTAGCTCTCAAGCATCTAGAAAAATTCAGTTTGTGTCCTGTTACATCTT
TTAAAACACCGAGACTTCAACAATAATTCTCCACAATCCCACGGCATTCGTTTATGCGGG
ATTGTAAAATTCTTAGATGTACCTACGTTCGCATTTCCAATTTGAAATAAACTTGGTTGC
CCTTTGAGGGGTTTGATAAAGATATGATAATGAAACCCATGGAATGTTACTTTCTCTAAA
AAAGGAGGGGGGGGGGTGGGCA

consensusID : consensus_14086#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 429
fasta sequence

                              [ATCTAGGTCCCCCTGACGCAGCGATTGTTCCCTCCCTTGGAGAGGTGGCCGTAGCTCTCCGGCGGAAGGCGGCGGANATGGCTTCCACGGCCGCGGCGGCAGTCGTCGCAGGGGTGCATCTCGTGGGCGCTGCGGCAGCGTGGGCTTGGTGGTGGTGGTGCGCGGGCTGTCCCGGTGCTTCCCCGCCGGAGATTCTGCGTCTCCGCGGCGGCGGGTGCGGGGTTCGACAACGAGAATCGCGAGTATGTGATCGTGGGTGGAGGCAACGCGGCCGGTTACGCGGCGAGGACGTTCGTCGAGCACGGCATGGCTGATGGCCGCCTTTGCATCGTCTCCAAGGAGGCGTATCCGCCATATGAGCGACCAGCACTGACAAAGGGCTATCTTTTCCCTCCAGACAAGAANCCTGCTCGNCTACCTGGCTTTCAT]

[+] EMBL AU183874             [ATCTAGGTCCCCCTGACGCAGCGATTGTTCCCTCCCTTGGAGAGGTGGCCGTAGCTCTCCGGCGGAAGGCGGCGGANATGGCTTCCACGGCCGCGGCGGCAGTCGTCGCAGGGGTGCATCTCGTGGGCGCTGCGGCAGCGTGGGCTTGGTGGTGGTGGTGCGCGGGCTGTCCCGGTGCTTCCCCGCCGGAGATTCTGCGTCTCCGCGGCGGCGGGTGCGGGGTTCGACAACGAGAATCGCGAGTATGTGATCGTGGGTGGAGGCAACGCGGCCGGTTACGCGGCGAGGACGTTCGTCGAGCACGGCATGGCTGATGGCCGCCTTTGCATCGTCTCCAAGGAGGCGTATCCGCCATATGAGCGACCAGCACTGACAAAGGGCTATCTTTTCCCTCCAGACAAGAANCCTGCTCGNCTACCTGGCTTTCAT]
[+] EMBL AU095121             [ATCTAGGTCCCCCTGACGCAGCGATTGTTCCCTCCCTTGGAGAGGTGGCCGTAGCTCTCCGGCGGAAGGCGGCGGAGATGGCTTCCACGGCCGCGGCGGC GTCGTCGCAGGGGTGCATCTCGTGGGCGCTGCGGCA CGTGGGCTTGGTGGTGGTGGTGCGCGGGCTGTCCCGGTGCTTCCCCGCCGGAGATTCTGCGTCTCCGCGGCGGC GGTGCGGGGTTCGACAACGAGAATCGCGAGTATGTGATCGTGGGTGGAGGCAACGCGGCCGGTTACGCGGCGAGGACGTTCGTCGAGCACGGCA                                                                                                                          ]




>consensus_14086#1
ATCTAGGTCCCCCTGACGCAGCGATTGTTCCCTCCCTTGGAGAGGTGGCCGTAGCTCTCC
GGCGGAAGGCGGCGGANATGGCTTCCACGGCCGCGGCGGCAGTCGTCGCAGGGGTGCATC
TCGTGGGCGCTGCGGCAGCGTGGGCTTGGTGGTGGTGGTGCGCGGGCTGTCCCGGTGCTT
CCCCGCCGGAGATTCTGCGTCTCCGCGGCGGCGGGTGCGGGGTTCGACAACGAGAATCGC
GAGTATGTGATCGTGGGTGGAGGCAACGCGGCCGGTTACGCGGCGAGGACGTTCGTCGAG
CACGGCATGGCTGATGGCCGCCTTTGCATCGTCTCCAAGGAGGCGTATCCGCCATATGAG
CGACCAGCACTGACAAAGGGCTATCTTTTCCCTCCAGACAAGAANCCTGCTCGNCTACCT
GGCTTTCAT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14086#0      TCTCTTCTCAACTCGACGGCCATCTTCTTCTTTCTCTCTCCACTCCGTCGCCGCCCCTTG 60
consensus_14086#1      ------------------------------------------------------------
                                                                                   

consensus_14086#0      GCCTCCCTCAACGGCCACCGCGCCCCTCCTCCGCCGCCAAATCGCACCCAACCCCTTCCC 120
consensus_14086#1      ------------------------------------------------------------
                                                                                   

consensus_14086#0      CTTTAAACTATTCCACCTATAAGGCCGCGCCGCCGCCGCCGACGAGAGAGACGGCCATGA 180
consensus_14086#1      --------------------------ATCTAGGTCCCCCTGACGCAGCGATTGTTCCCTC 34
                                                      *   ** * ****        *  *    

consensus_14086#0      CCTC----AGGTGGCCGTAGCTCTCCGGCGGAAGGCGGCGGAGATGGCTTCCACGGCCGC 236
consensus_14086#1      CCTTGGAGAGGTGGCCGTAGCTCTCCGGCGGAAGGCGGCGGANATGGCTTCCACGGCCGC 94
                       ***     ********************************** *****************

consensus_14086#0      GGCGGC-GTCGTCGCAGGGGTGCATCTCGTGGGCGCTGCGGCAGCGTGGGCTTGGTGGTG 295
consensus_14086#1      GGCGGCAGTCGTCGCAGGGGTGCATCTCGTGGGCGCTGCGGCAGCGTGGGCTTGGTGGTG 154
                       ****** *****************************************************

consensus_14086#0      GTGGTGCGCGGGCTGTCCCGGTGCTTCCCCGCCGGAGATTCTGCGTCTCCGCGGCGGCGG 355
consensus_14086#1      GTGGTGCGCGGGCTGTCCCGGTGCTTCCCCGCCGGAGATTCTGCGTCTCCGCGGCGGCGG 214
                       ************************************************************

consensus_14086#0      GTGCGGGGTTCGACAACGAGAATCGCGAGTATGTGATCGTGGGTGGAGGCAACGCGGCCG 415
consensus_14086#1      GTGCGGGGTTCGACAACGAGAATCGCGAGTATGTGATCGTGGGTGGAGGCAACGCGGCCG 274
                       ************************************************************

consensus_14086#0      GTTACGCGGCGAGGACGTTCGTCGAGCACGGCATGGCTGATGGCCGCCTTTGCATCGTCT 475
consensus_14086#1      GTTACGCGGCGAGGACGTTCGTCGAGCACGGCATGGCTGATGGCCGCCTTTGCATCGTCT 334
                       ************************************************************

consensus_14086#0      CCAAGGAGGCGTATCCGCCATATGAGCGACCAGCACTGACAAAGGGCTATCTTTTCCCTC 535
consensus_14086#1      CCAAGGAGGCGTATCCGCCATATGAGCGACCAGCACTGACAAAGGGCTATCTTTTCCCTC 394
                       ************************************************************

consensus_14086#0      CAGACAAGAAGCCTGCTCGTCTACCTGGCTTTCATACCTGTGTTGGATCAGGTGGGCAGA 595
consensus_14086#1      CAGACAAGAANCCTGCTCGNCTACCTGGCTTTCAT------------------------- 429
                       ********** ******** ***************                         

consensus_14086#0      GGCAGACTGCTGAATGGTACAAGGAGAACGGCATAGAGGTATTGTATGAGGATCCAGTTG 655
consensus_14086#1      ------------------------------------------------------------
                                                                                   

consensus_14086#0      TAGCGTTTGATGGCAAAACACATACCTTAAAAACTTCATCAGGGAAAATTCTGAAGTATG 715
consensus_14086#1      ------------------------------------------------------------
                                                                                   

consensus_14086#0      GGTCACTTATTATTTCTACTGGCTGTGAAGCTTCAAGGTTACCTGCTAAGATTGGAGGAA 775
consensus_14086#1      ------------------------------------------------------------
                                                                                   

consensus_14086#0      ATTTGCCTGGAGTTCACTATATACGTGATGTTGCTGATGCGGATTCTCTAGTATCTTCAT 835
consensus_14086#1      ------------------------------------------------------------
                                                                                   

consensus_14086#0      TGGGAAAAGCAAAGAAAATTGTTGTTATTGGTGGGGGCTATATTGGCATGGAGGTAGCAG 895
consensus_14086#1      ------------------------------------------------------------
                                                                                   

consensus_14086#0      CAGCAGCTTGTGGCTGGAATCTCGACACAACTATTATATTCCCAGAGGACCACATTATGC 955
consensus_14086#1      ------------------------------------------------------------
                                                                                   

consensus_14086#0      CAAGACTCTTTACACCTTCCCTTGCTAAGAAGTATGAGGAACTGTATCAGCAAAATGGTG 1015
consensus_14086#1      ------------------------------------------------------------
                                                                                   

consensus_14086#0      TCAAATTCATTAAGGGAGCTCTTATTGATAAACTTGAAGCTGGCTCTGATGGTAGGGTGT 1075
consensus_14086#1      ------------------------------------------------------------
                                                                                   

consensus_14086#0      CATCTGCAGTACTTGAAGATGGATCTGTAGTTGAAGCTGATACAGTTATTGTTGGTATAG 1135
consensus_14086#1      ------------------------------------------------------------
                                                                                   

consensus_14086#0      GAGCAAGACCAGTTATTGGCCCATTTGAAGCTGTTGGGGTCAACACTAAAGTTGGTGGAA 1195
consensus_14086#1      ------------------------------------------------------------
                                                                                   

consensus_14086#0      TAGAGGTTGATTCCTTGTTTAGAACTAGTATACCTGGTATCTTTGCTATTGGAGATGTAG 1255
consensus_14086#1      ------------------------------------------------------------
                                                                                   

consensus_14086#0      CAGCTTTTCCCCTCAAGATGTATGATAGAATGACTCGAGTTGAGCATGTGGATCATGCTC 1315
consensus_14086#1      ------------------------------------------------------------
                                                                                   

consensus_14086#0      GGAAGTCTGCACACCACTGTGTTGAAGCACTCCTAACATCACACACAAAGCCGTATGACT 1375
consensus_14086#1      ------------------------------------------------------------
                                                                                   

consensus_14086#0      ACCTTCCATATTTCTATTCAAGAGTTTTTGAGTACGAAGGAAGTTCAAGGAAAATTTGGT 1435
consensus_14086#1      ------------------------------------------------------------
                                                                                   

consensus_14086#0      GGCAATTTTACGGTGATAATGTTGGCGAAACAATTGAAGTGGGAAGCTTTGAACCAAAGA 1495
consensus_14086#1      ------------------------------------------------------------
                                                                                   

consensus_14086#0      TTGCTACCTTCTGGATTGACTCTGATAGTCGACTGAAGGGTGTTTTCCTTGAGAGTGGTA 1555
consensus_14086#1      ------------------------------------------------------------
                                                                                   

consensus_14086#0      GCTCAGAGGAATTTTCGCTTCTTCCTCAACTCGCTAAGTCTCAGCCCGTTGTAGACAAAG 1615
consensus_14086#1      ------------------------------------------------------------
                                                                                   

consensus_14086#0      CTAAGCTCAAAAGTGCAACCTCTGTCGAGGATGCCTTAGAGATCGCAAGAAGCTCTCTCC 1675
consensus_14086#1      ------------------------------------------------------------
                                                                                   

consensus_14086#0      ACTCTGGTTCTTCTGTTTAGCTCTCAAGCATCTAGAAAAATTCAGTTTGTGTCCTGTTAC 1735
consensus_14086#1      ------------------------------------------------------------
                                                                                   

consensus_14086#0      ATCTTTTAAAACACCGAGACTTCAACAATAATTCTCCACAATCCCACGGCATTCGTTTAT 1795
consensus_14086#1      ------------------------------------------------------------
                                                                                   

consensus_14086#0      GCGGGATTGTAAAATTCTTAGATGTACCTACGTTCGCATTTCCAATTTGAAATAAACTTG 1855
consensus_14086#1      ------------------------------------------------------------
                                                                                   

consensus_14086#0      GTTGCCCTTTGAGGGGTTTGATAAAGATATGATAATGAAACCCATGGAATGTTACTTTCT 1915
consensus_14086#1      ------------------------------------------------------------
                                                                                   

consensus_14086#0      CTAAAAAAGGAGGGGGGGGGGTGGGCA 1942
consensus_14086#1      ---------------------------