cluster # 14115

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Oryza sativa
cluster # 14115 cluster # 14115 Sequences # 15 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_14115#0 length = 2299 sequences # 11

consensus_14115#1 length = 711 sequences # 4

consensusID : consensus_14115#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 2299
fasta sequence

                              [TCCAATCTCTTTCTCTCTCCTCCTCCTCCACCTGAATCTCCCTCTCTCTCCTCCAAGAACAGGGGCGGCGAAGCAGCTAAGCCGGATTTCGTGGTTGGTGGCCTCTCCCCTTCCACCACCAGGCTCGCCCCGCCGCTGCCGCGAGGTGCCCGGCCGCCTGTTTCTTCTCTCCGGTGCATTTCGATCTGATTCCCCCGTCCGATTTCGTGTCCGTCCTGCTTCACACCCGGATGGTTCGAATCGATTCTTAAGGAGGTGAGGCGTTTAATTTGTTGTTGAGCTACGTGTAAATCCCCCCCTTTACATATGCGTGGAGAGATTGGAGCGGGCGTATGGAGCTTCGCTGAGCTCACGGCTTCTTCGGGATAGGCGGGGGAGGAGGGGGTGATGGTGCCATGGTTGGCATGAAGCTTCGTTTCTCATTTTCCATGGTGTTGGAATGCAGCTTCTCAGCTTGAGCAATTTGAGGGAAATATTGTCAAACCCAGGGAGCGTTTTCTCAGAGCAGTGATTATAATTTTTCGGTTTATTAGCATTCTTTTTTTAAGTATACAACTTCCTATTTTCATGTAACTATATATTTTCAAGGATTGTTACTGTTTAATTTGACATCACGGCTGCATGGATCCATTTCCTCCTAGATAGTTGCAGCTTCAACTCAATCTGCTTACACGCCTTTCTTGTTAGTGCTATAGGTTTATCGAGAACCTCATAAATCAGCTGTATTTTGTTCAGGTAATGACCTTCCCCCTTATCAAATGTCTCACCTGGAATACCTACCAGAACGTTATGGAGCTGGATAACTATGATTTCTCAACAATTGGATTATTCTAAAGCGTTAGTGGCGCCTGTTTTCTTGTAACGGTGTGACCTGTTGCAGATTGGTTGCTTTAGATTAACTTTGTCTGTGGTGATGCACCATGCATCTGATTAGTCAAAACTAGCATCCAGTAAGCGATGCCAAAGTGATTGAATTGGACATAGCATGGAAGCTTTAGAGTGAATGTGTTAATTGATAAGTGTAGTCCCTCCTTTCATTTGTTAAAAGTCTCATCTGTTTATTTGGACAAAAAAAAATCTTTGGTTGTTATAAAATGGAATACTTATGTGTTGAAAGATGAAAGCCATTAAGCATATGTCATGTCAAGTTGATCTATATGTCAACAAACAATTTTTAATGTCAAGTTGAGAGGCTCTGTTTTTAACTTGATCTTAAGGTGAGTTGTTTAGCTACTTGCTGAAAACATAATTAGTCGTGCATTGTCTGCCCATACCATATATAGCTGCAACAAGGTTATCTTACTGTGCAACTGCACAAATTACAATGACTAGTAGTTGTTCATTCCTCAGTATTAGTAACTTTATTTAAGTGAAAGTTTTATAATATTCTATCTTTTATTTCAGAAACAAATGAATCGTGGCGAATGAAGAGTTTAGCGATGTGCCTTAGTTGAATGGTTCCATTGCCACCCTGTTTGGCTGATTTTGTTCAGACGAACTCATCTTCAAGCTTATATGG-----GTTGCTGCATAGGTAATTTGAGCAAGTCCCAGCCACTTCCAGATTATAAACCAAAAACATCTGTAAGAAAGAAGCCTCGCCATTTATCTATTGGAAAAAGAAGGCAATGCTCATCAGGCCTAGAAGCAATGGAGAACAATGTTAGTGTATCCGTGTCCCTTGAGGGGAATATATCATCACTTCCCAACTCTATCATCAATGATTCTAATGGGAAAGATACCTCATTCATCAACCATGCGGCTATAGCATGGGCCGAGATGAGAAGGCAATGGACCGGAGACCAGGAGAAAGTTCCTAAAGAGGCATCACAAGAGCCAATAATAAGCTGGTG-CACAACATATGATGATCTGTTGTCGACAAGTGAGCGTTTTCCGCAGCCAATCCCGTTATCTGAGATGGTTGATTTTTTGGTTGACATATGGCATGAAGAAGGGCTCTATGATTAGTTGGGTTTGACTGTTTCTAATAGTTATCCTGAAAAAAAAAAAGAAAAGAAACTACAAATTAGTAAGCAGGATTAATCTCAAATTGGGTATTGGAAAAGAAAACTGTAATTGTAAAAGCTACAAAATGGTGTTGATATGATTTTGTGCTAGTTGGACCTCAAAAAATCAGATGTGTTGCTATCTGCTGAATGACCCTATGACATGTAACTGTCATAGGTAAAAACTGAAAGGCACATTAACATTGTTTGTAAACACGGCAACTTCACAACAAAAAAAAAATTTCTTGAGGTTGAGGTCTCGAGGAGCATTGGAAAATTTCCCAAATGCCAGAAAA]

[+] EMBL AK071565             [TCCAATCTCTTTCTCTCTCCTCCTCCTCCACCTGAATCTCCCTCTCTCTCCTCCAAGAACAGGGGCGGCGAAGCAGCTAAGCCGGATTTCGTGGTTGGTGGCCTCTCCCCTTCCACCACCAGGCTCGCCCCGCCGCTGCCGCGAGGTGCCCGGCCGCCTGTTTCTTCTCTCCGGTGCATTTCGATCTGATTCCCCCGTCCGATTTCGTGTCCGTCCTGCTTCACACCCGGATGGTTCGAATCGATTCTTAAGGAGGTGAGGCGTTTAATTTGTTGTTGAGCTACGTGTAAATCCCCCCCTTTACATATGCGTGGAGAGATTGGAGCGGGCGTATGGAGCTTCGCTGAGCTCACGGCTTCTTCGGGATAGGCGGGGGAGGAGGGGGTGATGGTGCCATGGTTGGCATGAAGCTTCGTTTCTCATTTTCCATGGTGTTGGAATGCAGCTTCTCAGCTTGAGCAATTTGAGGGAAATATTGTCAAACCCAGGGAGCGTTTTCTCAGAGCAGTGATTATAATTTTTCGGTTTATTAGCATTCTTTTTTTAAGTATACAACTTCCTATTTTCATGTAACTATATATTTTCAAGGATTGTTACTGTTTAATTTGACATCACGGCTGCATGGATCCATTTCCTCCTAGATAGTTGCAGCTTCAACTCAATCTGCTTACACGCCTTTCTTGTTAGTGCTATAGGTTTATCGAGAACCTCATAAATCAGCTGTATTTTGTTCAGGTAATGACCTTCCCCCTTATCAAATGTCTCACCTGGAATACCTACCAGAACGTTATGGAGCTGGATAACTATGATTTCTCAACAATTGGATTATTCTAAAGCGTTAGTGGCGCCTGTTTTCTTGTAACGGTGTGACCTGTTGCAGATTGGTTGCTTTAGATTAACTTTGTCTGTGGTGATGCACCATGCATCTGATTAGTCAAAACTAGCATCCAGTAAGCGATGCCAAAGTGATTGAATTGGACATAGCATGGAAGCTTTAGAGTGAATGTGTTAATTGATAAGTGTAGTCCCTCCTTTCATTTGTTAAAAGTCTCATCTGTTTATTTGGACAAAAAAAAATCTTTGGTTGTTATAAAATGGAATACTTATGTGTTGAAAGATGAAAGCCATTAAGCATATGTCATGTCAAGTTGATCTATATGTCAACAAACAATTTTTAATGTCAAGTTGAGAGGCTCTGTTTTTAACTTGATCTTAAGGTGAGTTGTTTAGCTACTTGCTGAAAACATAATTAGTCGTGCATTGTCTGCCCATACCATATATAGCTGCAACAAGGTTATCTTACTGTGCAACTGCACAAATTACAATGACTAGTAGTTGTTCATTCCTCAGTATTAGTAACTTTATTTAAGTGAAAGTTTTATAATATTCTATCTTTTATTTCAGAAACAAATGAATCGTGGCGAATGAAGAGTTTAGCGATGTGCCTTAGTTGAATGGTTCCATTGCCACCCTGTTTGGCTGATTTTGTTCAGACGAACTCATCTTCAAGCTTATATGG     GTTGCTGCATAGGTAATTTGAGCAAGTCCCAGCCACTTCCAGATTATAAACCAAAAACATCTGTAAGAAAGAAGCCTCGCCATTTATCTATTGGAAAAAGAAGGCAATGCTCATCAGGCCTAGAAGCAATGGAGAACAATGTTAGTGTATCCGTGTCCCTTGAGGGGAATATATCATCACTTCCCAACTCTATCATCAATGATTCTAATGGGAAAGATACCTCATTCATCAACCATGCGGCTATAGCATGGGCCGAGATGAGAAGGCGATGGACCGGAGACCAGGAGAAAGTTCCTAAAGAGGCATCACAAGAGCCAATAATAAGCTGGTG CACAACATATGATGATCTGTTGTCGACAAGTGAGCGTTTTCCGCAGCCAATCCCGTTATCTGAGATGGTTGATTTTTTGGTTGACATATGGCATGAAGAAGGGCTCTATGATTAGTTGGGTTTGACTGTTTCTAATAGTTATCCTGAAAAAAAAAAAGAAAAGAAACTACAAATTAGTAAGCAGGATTAATCTCAAATTGGGTATTGGAAAAGAAAACTGTAATTGTAAAAGCTACAAAATGGTGTTGATATGATTTTGTGCTA                                                                                                                                                                                         ]
[+] EMBL CF196139             [                                                  CTCCAAGAACAGGGGCGGCGAAGCAGCTAAGCCGGATTTCGTGGTTGGTGGCCTCTCCCCTTCCACCACCAGGCTCGCCCCGCCGCTGCCGCGAGGTGCCCGGCCGCCTGTTTCTTCTCTCCGGTGCATTTCGATCTGATTCCCCCGTCCGATTTCGTGTCCGTCCTGCTTCACACCCGGATGGTTCGAATCGATTCTTAAGGAGGTGAGGCGTTTAATTTGTTGTTGAGCTACGTGTAAATCCCCCCCTTTACATATGCGTGGAGAGATTGGAGCGGGCGTATGGAGCTTCGCTGAGCTCACGGCTTCTTCGGGATAGGCGGGGGNNGANGGGGTGATGGTGCCATGGTTGGCATGNAGCTTNNNNNNNNATTTTCCATGGTGTNNNNATGCAGCTTCTNNNNNNGAGCAATTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AU174852             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            AAACAAATGAATCGTGGCGAATGAAGAGTTTAGCGATGTGCCTTAGTTGAATGGTTCCATTGCCACCCTGTTTGGCTGATTTTGTTCAGACGAACTCATCTTCAAGCTTATATGG     GTTGCTGCATAGGTAATTTGAGCAAGTCCCAGCCACTTCCAGATTATAAACCAAAAACATCTGTAAGAAAGAAGCCTCGCCATTTATCTATTGGAAAAAGAAGGCAATGCTCATCAGGCCTAGAAGCAATGGAGAACAATGTTAGTGTATCCGTGTCCCTTGAGGGGAATATATCATCACTTCCCAACTCTATCATCAATGATTCTAATGGGAAAGATACCTCATTCATCAACCATGCGGCTATAGCATGGGCCGAGATGAGAAGGCAATGGACCGGAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CF332908             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CAAATGAATCGTGGCGAATGAAGAGTTTAGCGATGTGCCTTAGTTGAATGGTTCCATTGCCACCCTGTTTGGCTGATTTTGTTCAGACGAACTCATCTTCAAGCTTATATGGGTACAGTTGCTGCATAGGTAATTTGAGCAAGTCCCAGCCACTTCCAGATTATAAACCAAAAACATCTGTAAGAAAGAAGCCTCGCCATTTATCTATTGGAAAAAGAAGGCAATGCTCATCAGGCCTAGAAGCAATGGAGAACAATGTTAGTGTATCCGTGTCCCTTGAGGGGAATATATCATCACTTCCCAACTCTATCATCAATGATTCTAATGGGAAAGATACCTCATTCATCAACCATGCGGCTATAGCATGGGCCGAGATGAGAAGGCAATGGACCGGAGACCAGGAGAAAGTTCCTAAAGAGGCATCACAAGAGCCAATAATAAGCTGGTG CACAACATATGATGATCTGTTGTCGACAAGTGAGCGTTTTCCGCAGCCAATCCCGTTATCTGAGATGGTTGATTTTTTGGTTTACATATGGCATGAAGAAGGGCTCTATGATTAGTTGGGTTTGACTGTTTCTAATAGTTATCCTGAAAAAAA                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CF196496             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     nTTAGTTGAATGGTTCCATTGNNNNNNTGTTTGNCTGANNNNNTTCAGACGANNNCNNNNNCAAGCTTATATGGGTACAGTTGCTGCATAGGTAATTTGAGCAAGTCCCAGCCACTTCCAGATTATAAACCAAAAACATCTGTAAGAAAGAAGCCTCGCCATTTANNNATTGGAAAAAGAAGGCAATGCTCATCAGGCCTAGAAGCAATGGAGAACAATGTTAGTGTATCCGTGTCCCTTGAGGGGAATATATCATCACTTCCCAACTCTATCATCAATGATNNNAATGGGAAAGATACCTCATTCATCAACCATGCGGCTATAGCATGGGCCGAGATGAGAAGGCAATGGACCGGAGACCAGGAGAAAGTTCCTAAAGAGGCATCACAAGAGCCAATAATAAGCTGGTG CACAACATATGATGATCTGTTGTCGACAAGTGAGCGTTTTCCGCAGCCAATCCCGTTATCTGAGATGGTTGATTTTTTGGTTGACATATGGCATGAAGAAGGGCTCTATGATTAGTTGGGTTTGACTGTTTCTAATAGTTATCCTGAAA                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CF295217             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GAAGCCTCGCCATTTATCTATTGGAAAAAGAAGGCAATGCTCATCAGGCCTAGGAGCAATGGAGAACAATGTTAGTGTATCCGTGTCCCTTGAGGGGAATATATCATCACTTCCCAACTCTATCATCAATGATTCTAATGGGAAAGATACCTCATTCATCAACCATGCGGCTATAGCATGGGCCGAGATGAGAAGGCAATGGACCGGAGACCAGGAGAAAGTTCCTAAAGAGGCATCACAAAAGCCAATAATAAGCAGGAGACCAAACATATGATGATCTGTTGTCGACAAGTGAGCGTTTTCCGCAGCAAAAACCGTTATCTGAGATGGTTGATTTTTTGGTTGACATATGGCATGAAGAAGGGCTCTATGATTAGTTGGGTTTGACTGTAAATAATAGTTATCCTGAAAAAAAAAAA AAAA AAACac                                                                                                                                                                                                                                                                                        ]
[+] EMBL AU174851             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GGGGAATATATCATCACTTCCCAACTCTATCATCAATGATTNTAATGGGAAAGATACCTCATTCATCAACCATGCGGCTATAGCATGGGCCGAGATGAGAAGGCAATGGACCGGAGACCAGGAGAAAGTTCCTAAAGAGGCATCCCAAGAGCCNATAATAAGCTGGTG CCCAACATATGATGATCTGTTGTCGACAAGTGAGCGTTTTCCGCAGCCNATCCCGTTATNTGAGATGGTTGATTTTTTGGTTGACATATGGCATGAAGAAGGGCTCTATGATTAGTTGGGTTTGACTGTTTNTAATAGTTATCCTGAAAAAAAAAAAGAAAAGAAACTACNAATTAGTAAGCAGGATTAATCTCAAATTGGGTATTGGAAAAGAAAACTGTAATTGTAAAAGCTACAAAATGGTGTTGATATGATTTTGTGCTAGTTGGACCTCAAAAAAaaaaa                                                                                                                                                                    ]
[-] EMBL AA753750             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              tanTCTTCAATTCCCAA TTTNTCTTCAATGATT TAAT GGAAAG NACNTCATTCNTC ACCATGCGG TATAGCAT GGCCGAGATGAG AGGCAATGGACCGGAGACCAGGAG AAGTTCNTAAAGAGGCATCACNAGA CCAATAATAAGCTGGTG CACAACATATGATGATCTGTTGTCGACAAGTGAGCGTTTTCCGCAGCCAATCCCGTTATCTGAGATGGTTGATTTTTTGGTTGACATATGGCATGAAGAAGGGCTCTATGATTAGTTGGGTTTGACTGTTTCTAATAGTTATCCTG AAAAAAAAAAGAAAAGAAACTACAAATTAGTAAGCAGGATTAATNTCAAATTGGGTATTGGAAAAGAAAACTGTAATTGTAAAAGCTACAAAATGGTGTTGATATGATTTTGTGCTAGTTGGACCTCAAGCTCTCAGATGTGTTGCTATCTGCTGAATGACCCTATGACATGTAACTGTCATAGGTAAAAACTGAAAGGCACATTAACATTGTTTGTAAACACGGCAACTTCACAACAAAAAAAAAA                                                       ]
[-] EMBL CF297335             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TCCCAACTCTATCATCAATGATTCTAATGGGAAAGATACCTCATTCATCAACCATGCGGCTATAGCATGGGCCGAGATGAGAAGGCAATGGACCGGAGACCAGGAGAAAGTTCCTAAAGAGGCATCACAAGAGCCAATAATAAGCTGGTG CACAACATATGATGATCTGTTGTCGACAAGTGAGCGTTTTCCGCAGCCAATCCCGTTATCTGAGATGGTTGATTTTTTGGTTGACATATGGCATGAAGAAGGGCTCTATGATTAGTTGGGTTTGACTGTTTCTAATAGTTATCCTGAAAAAAAAAAAGAAAAGAAACTACAAATTAGTAAGCAGGATTAATCTCAAATTGGGTATTGGAAAAGAAAACTGTAATTGTAAAAGCTACAAAATGGTGTTGATATGATTTTGTGCTAGTTGGACCTCAAAAAA                                                                                                                                                                         ]
[+] EMBL BE229510             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ACCTCATTCATCAACCATGCGGCTATAGCATGGGCCGAGATGAGAAGGCAATGGMCCGGAGACCAGGAGAAAGTTCCTAAAGAGGCATCACAAGAGCCAATAATAAGCTGGTG CACAACATATGATGATCTGTTGTCGACAAGTGAGCGTTTTCCGCAGCCAATCCCGTTATCTGAGATGGTTGATTTTTTGGTTGACATATGGCATGGAG RGGGCTCTATGATTAGTTGGGTTTGACTGTTTCTAATAGTTATCCTG AAAAAAAAAAG AAAGACACTACATATTAGT AGCAGGWTTAATCTCAAATTGGGTATKG  AAAG AAACTKT ATTAT AAAGCTAC AAATGGTGTTGATATGw                                                                                                                                                                                                   ]
[+] EMBL CF314515             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       AGTTGGACCTCAAGCTCTCAGATGTGTTGCTATCTGCTGAATGACCCTATGACATGTAACTGTCATAGGTAAAAACTGAAAGGCACATAAACATTGTTTGTAAACACGGCAACTTCACAACAAACATCCATTTTCTTGAGGTTGAGGTCTCGAGGAGCATTGGAAAATTTCCCAAATGCCAGAAAA]




>consensus_14115#0
TCCAATCTCTTTCTCTCTCCTCCTCCTCCACCTGAATCTCCCTCTCTCTCCTCCAAGAAC
AGGGGCGGCGAAGCAGCTAAGCCGGATTTCGTGGTTGGTGGCCTCTCCCCTTCCACCACC
AGGCTCGCCCCGCCGCTGCCGCGAGGTGCCCGGCCGCCTGTTTCTTCTCTCCGGTGCATT
TCGATCTGATTCCCCCGTCCGATTTCGTGTCCGTCCTGCTTCACACCCGGATGGTTCGAA
TCGATTCTTAAGGAGGTGAGGCGTTTAATTTGTTGTTGAGCTACGTGTAAATCCCCCCCT
TTACATATGCGTGGAGAGATTGGAGCGGGCGTATGGAGCTTCGCTGAGCTCACGGCTTCT
TCGGGATAGGCGGGGGAGGAGGGGGTGATGGTGCCATGGTTGGCATGAAGCTTCGTTTCT
CATTTTCCATGGTGTTGGAATGCAGCTTCTCAGCTTGAGCAATTTGAGGGAAATATTGTC
AAACCCAGGGAGCGTTTTCTCAGAGCAGTGATTATAATTTTTCGGTTTATTAGCATTCTT
TTTTTAAGTATACAACTTCCTATTTTCATGTAACTATATATTTTCAAGGATTGTTACTGT
TTAATTTGACATCACGGCTGCATGGATCCATTTCCTCCTAGATAGTTGCAGCTTCAACTC
AATCTGCTTACACGCCTTTCTTGTTAGTGCTATAGGTTTATCGAGAACCTCATAAATCAG
CTGTATTTTGTTCAGGTAATGACCTTCCCCCTTATCAAATGTCTCACCTGGAATACCTAC
CAGAACGTTATGGAGCTGGATAACTATGATTTCTCAACAATTGGATTATTCTAAAGCGTT
AGTGGCGCCTGTTTTCTTGTAACGGTGTGACCTGTTGCAGATTGGTTGCTTTAGATTAAC
TTTGTCTGTGGTGATGCACCATGCATCTGATTAGTCAAAACTAGCATCCAGTAAGCGATG
CCAAAGTGATTGAATTGGACATAGCATGGAAGCTTTAGAGTGAATGTGTTAATTGATAAG
TGTAGTCCCTCCTTTCATTTGTTAAAAGTCTCATCTGTTTATTTGGACAAAAAAAAATCT
TTGGTTGTTATAAAATGGAATACTTATGTGTTGAAAGATGAAAGCCATTAAGCATATGTC
ATGTCAAGTTGATCTATATGTCAACAAACAATTTTTAATGTCAAGTTGAGAGGCTCTGTT
TTTAACTTGATCTTAAGGTGAGTTGTTTAGCTACTTGCTGAAAACATAATTAGTCGTGCA
TTGTCTGCCCATACCATATATAGCTGCAACAAGGTTATCTTACTGTGCAACTGCACAAAT
TACAATGACTAGTAGTTGTTCATTCCTCAGTATTAGTAACTTTATTTAAGTGAAAGTTTT
ATAATATTCTATCTTTTATTTCAGAAACAAATGAATCGTGGCGAATGAAGAGTTTAGCGA
TGTGCCTTAGTTGAATGGTTCCATTGCCACCCTGTTTGGCTGATTTTGTTCAGACGAACT
CATCTTCAAGCTTATATGGGTTGCTGCATAGGTAATTTGAGCAAGTCCCAGCCACTTCCA
GATTATAAACCAAAAACATCTGTAAGAAAGAAGCCTCGCCATTTATCTATTGGAAAAAGA
AGGCAATGCTCATCAGGCCTAGAAGCAATGGAGAACAATGTTAGTGTATCCGTGTCCCTT
GAGGGGAATATATCATCACTTCCCAACTCTATCATCAATGATTCTAATGGGAAAGATACC
TCATTCATCAACCATGCGGCTATAGCATGGGCCGAGATGAGAAGGCAATGGACCGGAGAC
CAGGAGAAAGTTCCTAAAGAGGCATCACAAGAGCCAATAATAAGCTGGTGCACAACATAT
GATGATCTGTTGTCGACAAGTGAGCGTTTTCCGCAGCCAATCCCGTTATCTGAGATGGTT
GATTTTTTGGTTGACATATGGCATGAAGAAGGGCTCTATGATTAGTTGGGTTTGACTGTT
TCTAATAGTTATCCTGAAAAAAAAAAAGAAAAGAAACTACAAATTAGTAAGCAGGATTAA
TCTCAAATTGGGTATTGGAAAAGAAAACTGTAATTGTAAAAGCTACAAAATGGTGTTGAT
ATGATTTTGTGCTAGTTGGACCTCAAAAAATCAGATGTGTTGCTATCTGCTGAATGACCC
TATGACATGTAACTGTCATAGGTAAAAACTGAAAGGCACATTAACATTGTTTGTAAACAC
GGCAACTTCACAACAAAAAAAAAATTTCTTGAGGTTGAGGTCTCGAGGAGCATTGGAAAA
TTTCCCAAATGCCAGAAAA

consensusID : consensus_14115#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 711
fasta sequence

                              [TCCAATCTCTTTCTCTCTCCTCCTCCTCCACCTGAATCTCCCTCCCTCTCCTCCAAGAACA-GGGGCGGCGAAGCAGCTAAGCCGGATTTCGTGGTTGGTGGCCTCTCCCCTTCCACCACCAGGCTCGCCCCGCCGCTGCCGCGAGGTGCCCGGCCGCCTGTTTCTTCTCTCCGGTGCATTTCGATCTGATTCCCCCGTCCGATTTCGTGTCCGTCCTGCTTCACACCCGGATGGTTCGAATCGATTCTTAAGGAGAAACAAATGAATCGTGGCGAATGAAGAGTTTAGCGATGTGCCTTAGTTGAATGGTTCCATTGCCACCCTGTTTGGCTGATTTTGTTCAGACGAACTCATCTTCAAGCTTATATGGGTACAGTTGCTGCATAGGTAATTTGAGCAAGTCCCAGCCACTTCCAGATTATAAACCAAAAACATCTGTAAGAAAGAAGCCTCGCCATTTATCTATTGGAAAAAGAAGGCAATGCTCATCAGGCCTAGAAGCAATGGAGAACAATGTTAGTGTATCCGTGTCCCTTGAGGGGAATATATCATCACTTCCCAACTCTATCATCAATGATTCTAATGGGAAAGATACCTCATTCATCAACCATGCGGCTATAGCATGGGCCGAGATGAGAAGGCAATGGACCGGAGACCAGGAGAAGTTCCTAAAGAGGCATCACAAGAGCCAATAATAAGCTGGTGCACAAC]

[+] EMBL CF295594             [TCCAATCTCTTTCTCTCTCCTCCTCCTCCACCTGAATCTCCCTCTCTCTCCTCCAAGAACA GGGGCGGCGAAGCAGCTAAGCCGGATTTCGTGGTTGGTGGCCTCTCCCCTTCCACCACCAGGCTCGCCCCGCCGCTGCCGCGAGGTGCCCGGCCGCCTGTTTCTCCTCTCCGGTGCATTTCGATCTGATTCCCCCGTCCGATTTCGTGTCCGTCCTGCTTCACACCCGGATGGTTCGAATCGATTCTTAAGGAGAAACAAATGAATCGTGGCGAATGAAGAGTTTAGCGATGTGCCTTAGTTGAATGGTTCCATTGCCACCCTGTTTGGCTGATTTTGTTCAGACGAACTCATCTTCAAGCTTATATGG     GTTGCTGCATAGGTAATTTGAGCAAGTCCCAGCCACTTCCAGATTATAAACCAAAAACATCTGTAAGAAAGAAGCCTCGCCATTTATCTATTGGAAAAAGAAGGCAATGCTCATCAGGCCTAGAAGCAATGGAGAACAATGTTAGTGTATCCGTGTCCCTTGAGGGGAATATATCATCACTTCCCAACTCTATCATCAATGATTCTAATGGGAAAGATACCTCATTCATCAACCATGCGGCTATA                                                                                           ]
[+] EMBL BF430639             [                              CCTGAATCTCCCTCCCTCTCCTCCAAGAACAGGGGGCGGCGAAGCAGCTAAGCCGGATTTCGTGGTTGGTGGCCTCTCCCCTTCCACCACCAGGCTCGCCCCGCCGCTGCCGCGAGGTGCCCGGCCGCCTGTTTCTTCTCTCCGGTGCATTTCGATCTGATTCCCCCGTCCGATTTCGTGTCCGTCCTGCTTCACACCCGGATGGTTCGAATCGATTCTTGAGGAGAAACAAATGAATCGTGGCGAATGAAGAGTTTAGCGATGTGCCTTAGTTGAATGGTTCCATTGCCACCCTGTTTGGCTGATTTTGTTCAGACGAACTCATCTTCAAGCTTATATGGGTACAGTTGCTGCATAGGTAATTTGAGCAAGTCCCAGCCACTTCCAGATTATAAACCAAAAACATCTGTAAGAAAGAAGCCTCGCCATTCATCTATTGGAAAAAGAAGGCAATGCTCATCAGGCCTAGAAGCAATGGAGAACAATGTTAGTGTATCTGTGTCCCTTGAGGGGAATATATCATCACTTCCCAACTCTATCATCAATGATTCTAATGGGAAAGATACCTCATTCATCAACCATGCGGCTATAGCATGGGCCGAGATGAGAAGGCAATGGACCGGAGACCAGGAGAAGTTCCTAAAGAGGCATCACAAGAGCCAATAATAAGCTGGTGCACAAC]
[+] EMBL AA751689             [                                 GAATCTCCCTCNCTCTCCTCCAAGAACA GGGGCGGNCAAGCAGCTAAGCCGGATTTCGTGGTTGGTGGCCTCTCCCCTTCCACCACCAGGCTCGCCCCGCCGCTGCCGCGAGGTGCCCGGCCGCCTGTTTCTTCTCTCCGGTGCATTTCGATCTGATTCCCCCGTCCGATTTCGTGTCCGTCCTGCTTCACACCCGGATGGTTCGAATCGATTCTTGAGGANAAACAAATGAATCGTGGCGAATGAAGAGTTTAGCGATGTGCCTTAGTTGAATGGTTCCATTGCCACCCTGTTTGGCTGATTTTGTTCANACAAACTCATCTTCAAGCTTATTTNGGTNCAGTTGCTGCATAGGTAATTTGAGCAAGTCCCAGCCACTTCCAGATTATAAACCAAAAACATCTGTNAGAAAGAAGCCTCGCCATTCATCTATTGGAAAAAGAAGGCAATGCTCATCAGGCCTAGAANCAATGGAGAACAATGTTAGTGTNTCTGTGTCCCTTGAGGGGAATATTTCATCAC                                                                                                                                                            ]
[+] EMBL CF332907             [                                                                            GCCAAGCCGGATTTCGTGGTTGGTGGCCTCTCCCCTTCCACCACCAGGCTCGCCCCGCCGCTGCCGCGAGGTGCCCGGCCGCCTGTTTCTTCTCTCCGGTGCATTTCGATCTGATTCCCCCGTCCGATTTCGTGTCCGTCCTGCTTCACACCCGGATGGTTCGAATCGATTCTTAAGGAGAAACAAATGAATCGTGGCGAATGAAGAGTTTAGCGATGTGCCTTAGTTGAATGGTTCCATTGCCACCCTGTTTGGCTGATTTTGTTCAGACGAACTCATCTTCAAGCTTATATGGGTACAGTTGCTGCATAGGTAATTTGAGCAAGTCCCAGCCACTTCCAGATTATAAACCAAAAACATCTGTAAGAAAGAAGCCTCGCCATTTATCTATTGGAAAAAGAAGGCAATGCTCATCAGGCCTAGAAGCAATGGAGAACAATGTTAGTGTATCCGTGTCCCTTGAGGGGAATATATCATCACTTCCCAACTCTATCATCAATGATTCTAATGGGAAAGATACCTCATTCATCAACCATGCGGCTATAGCATG                                                                                      ]




>consensus_14115#1
TCCAATCTCTTTCTCTCTCCTCCTCCTCCACCTGAATCTCCCTCCCTCTCCTCCAAGAAC
AGGGGCGGCGAAGCAGCTAAGCCGGATTTCGTGGTTGGTGGCCTCTCCCCTTCCACCACC
AGGCTCGCCCCGCCGCTGCCGCGAGGTGCCCGGCCGCCTGTTTCTTCTCTCCGGTGCATT
TCGATCTGATTCCCCCGTCCGATTTCGTGTCCGTCCTGCTTCACACCCGGATGGTTCGAA
TCGATTCTTAAGGAGAAACAAATGAATCGTGGCGAATGAAGAGTTTAGCGATGTGCCTTA
GTTGAATGGTTCCATTGCCACCCTGTTTGGCTGATTTTGTTCAGACGAACTCATCTTCAA
GCTTATATGGGTACAGTTGCTGCATAGGTAATTTGAGCAAGTCCCAGCCACTTCCAGATT
ATAAACCAAAAACATCTGTAAGAAAGAAGCCTCGCCATTTATCTATTGGAAAAAGAAGGC
AATGCTCATCAGGCCTAGAAGCAATGGAGAACAATGTTAGTGTATCCGTGTCCCTTGAGG
GGAATATATCATCACTTCCCAACTCTATCATCAATGATTCTAATGGGAAAGATACCTCAT
TCATCAACCATGCGGCTATAGCATGGGCCGAGATGAGAAGGCAATGGACCGGAGACCAGG
AGAAGTTCCTAAAGAGGCATCACAAGAGCCAATAATAAGCTGGTGCACAAC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14115#0      TCCAATCTCTTTCTCTCTCCTCCTCCTCCACCTGAATCTCCCTCTCTCTCCTCCAAGAAC 60
consensus_14115#1      ------------------------------------------------------------
                                                                                   

consensus_14115#0      AGGGGCGGCGAAGCAGCTAAGCCGGATTTCGTGGTTGGTGGCCTCTCCCCTTCCACCACC 120
consensus_14115#1      ------------------------------------------------------------
                                                                                   

consensus_14115#0      AGGCTCGCCCCGCCGCTGCCGCGAGGTGCCCGGCCGCCTGTTTCTTCTCTCCGGTGCATT 180
consensus_14115#1      ------------------------------------------------------------
                                                                                   

consensus_14115#0      TCGATCTGATTCCCCCGTCCGATTTCGTGTCCGTCCTGCTTCACACCCGGATGGTTCGAA 240
consensus_14115#1      ------------------------------------------------------------
                                                                                   

consensus_14115#0      TCGATTCTTAAGGAGGTGAGGCGTTTAATTTGTTGTTGAGCTACGTGTAAATCCCCCCCT 300
consensus_14115#1      ------------------------------------------------------------
                                                                                   

consensus_14115#0      TTACATATGCGTGGAGAGATTGGAGCGGGCGTATGGAGCTTCGCTGAGCTCACGGCTTCT 360
consensus_14115#1      ------------------------------------------------------------
                                                                                   

consensus_14115#0      TCGGGATAGGCGGGGGAGGAGGGGGTGATGGTGCCATGGTTGGCATGAAGCTTCGTTTCT 420
consensus_14115#1      ------------------------------------------------------------
                                                                                   

consensus_14115#0      CATTTTCCATGGTGTTGGAATGCAGCTTCTCAGCTTGAGCAATTTGAGGGAAATATTGTC 480
consensus_14115#1      ------------------------------------------------------------
                                                                                   

consensus_14115#0      AAACCCAGGGAGCGTTTTCTCAGAGCAGTGATTATAATTTTTCGGTTTATTAGCATTCTT 540
consensus_14115#1      ------------------------------------------------------------
                                                                                   

consensus_14115#0      TTTTTAAGTATACAACTTCCTATTTTCATGTAACTATATATTTTCAAGGATTGTTACTGT 600
consensus_14115#1      ------------------------------------------------------------
                                                                                   

consensus_14115#0      TTAATTTGACATCACGGCTGCATGGATCCATTTCCTCCTAGATAGTTGCAGCTTCAACTC 660
consensus_14115#1      ------------------------------------------------------------
                                                                                   

consensus_14115#0      AATCTGCTTACACGCCTTTCTTGTTAGTGCTATAGGTTTATCGAGAACCTCATAAATCAG 720
consensus_14115#1      ------------------------------------------------------------
                                                                                   

consensus_14115#0      CTGTATTTTGTTCAGGTAATGACCTTCCCCCTTATCAAATGTCTCACCTGGAATACCTAC 780
consensus_14115#1      ------------------------------------------------------------
                                                                                   

consensus_14115#0      CAGAACGTTATGGAGCTGGATAACTATGATTTCTCAACAATTGGATTATTCTAAAGCGTT 840
consensus_14115#1      ------------------------------------------------------------
                                                                                   

consensus_14115#0      AGTGGCGCCTGTTTTCTTGTAACGGTGTGACCTGTTGCAGATTGGTTGCTTTAGATTAAC 900
consensus_14115#1      ------------------------------------------------------------
                                                                                   

consensus_14115#0      TTTGTCTGTGGTGATGCACCATGCATCTGATTAGTCAAAACTAGCATCCAGTAAGCGATG 960
consensus_14115#1      ------------------------------------------------------------
                                                                                   

consensus_14115#0      CCAAAGTGATTGAATTGGACATAGCATGGAAGCTTTAGAGTGAATGTGTTAATTGATAAG 1020
consensus_14115#1      ------------------------------------------------------------
                                                                                   

consensus_14115#0      TGTAGTCCCTCCTTTCATTTGTTAAAAGTCTCATCTGTTTATTTGGACAAAAAAAAATCT 1080
consensus_14115#1      ------------------------------------------------------------
                                                                                   

consensus_14115#0      TTGGTTGTTATAAAATGGAATACTTATGTGTTGAAAGATGAAAGCCATTAAGCATATGTC 1140
consensus_14115#1      -------------------------------------------TCCAATCTCTTTCTCTC 17
                                                                   *** *     * * **

consensus_14115#0      ATGTCAAGTTG-ATCTATATGTCAACAAACAATTTTTAATGTCAAGTTGAGAGGCTCTGT 1199
consensus_14115#1      TCCTCCTCCTCCACCTGAATCTCCCTCCCTCTCCTCCAAGAACAGGGGCGGCGAAGCAGC 77
                          **    *  * **  ** **           *  **   ** *    * *   * * 

consensus_14115#0      TTTTAACTTGATCTTAAGGTGAGTTGTTTAGCTACTTGCTGAAAACATAATTAGTCGTGC 1259
consensus_14115#1      T--AAGCCGGATTTCGTGGTTGGTGGCCTCTCCCCTTCC-------ACCACCAGGCTCGC 128
                       *   * *  *** *   ***  ** *  *  *  *** *       *  *  ** *  **

consensus_14115#0      ATTGTCTGCCCATACCATATATAGCTGCAACAAGGTTATCTTACTGTGCAACTGCACAAA 1319
consensus_14115#1      ----CCCGCCGCTGCCGCG---AGGTGCCC---GGCCGCCTGTTTCTTCTCTCCGGTGCA 178
                            * ***  * **      ** ***     **    **   * * *          *

consensus_14115#0      TTACAATGACTAGTAGTTGTTCATTCCTCAGTATTAGTAACTTTATTTAAGTGAAAGTTT 1379
consensus_14115#1      TTTCGAT--CTGATTCCCCCGTCCGATTTCGTGTCCGTCCTGCTTCACACCCGGATGGTT 236
                       ** * **  **  *             *  ** *  **     *    *   * * * **

consensus_14115#0      TATAATATTCTATCTTTTATTTCAGAAACAAATGAATCGTGGCGAATGAAGAGTTTAGCG 1439
consensus_14115#1      CGAA----TCGATTCTTAAGG--AGAAACAAATGAATCGTGGCGAATGAAGAGTTTAGCG 290
                          *    ** **  ** *    *************************************

consensus_14115#0      ATGTGCCTTAGTTGAATGGTTCCATTGCCACCCTGTTTGGCTGATTTTGTTCAGACGAAC 1499
consensus_14115#1      ATGTGCCTTAGTTGAATGGTTCCATTGCCACCCTGTTTGGCTGATTTTGTTCAGACGAAC 350
                       ************************************************************

consensus_14115#0      TCATCTTCAAGCTTATATGGGT-----TGCTGCATAGGTAATTTGAGCAAGTCCCAGCCA 1554
consensus_14115#1      TCATCTTCAAGCTTATATGGGTACAGTTGCTGCATAGGTAATTTGAGCAAGTCCCAGCCA 410
                       **********************     *********************************

consensus_14115#0      CTTCCAGATTATAAACCAAAAACATCTGTAAGAAAGAAGCCTCGCCATTTATCTATTGGA 1614
consensus_14115#1      CTTCCAGATTATAAACCAAAAACATCTGTAAGAAAGAAGCCTCGCCATTTATCTATTGGA 470
                       ************************************************************

consensus_14115#0      AAAAGAAGGCAATGCTCATCAGGCCTAGAAGCAATGGAGAACAATGTTAGTGTATCCGTG 1674
consensus_14115#1      AAAAGAAGGCAATGCTCATCAGGCCTAGAAGCAATGGAGAACAATGTTAGTGTATCCGTG 530
                       ************************************************************

consensus_14115#0      TCCCTTGAGGGGAATATATCATCACTTCCCAACTCTATCATCAATGATTCTAATGGGAAA 1734
consensus_14115#1      TCCCTTGAGGGGAATATATCATCACTTCCCAACTCTATCATCAATGATTCTAATGGGAAA 590
                       ************************************************************

consensus_14115#0      GATACCTCATTCATCAACCATGCGGCTATAGCATGGGCCGAGATGAGAAGGCAATGGACC 1794
consensus_14115#1      GATACCTCATTCATCAACCATGCGGCTATAGCATGGGCCGAGATGAGAAGGCAATGGACC 650
                       ************************************************************

consensus_14115#0      GGAGACCAGGAGAAAGTTCCTAAAGAGGCATCACAAGAGCCAATAATAAGCTGGTGCACA 1854
consensus_14115#1      GGAGACCAGGAGAA-GTTCCTAAAGAGGCATCACAAGAGCCAATAATAAGCTGGTGCACA 709
                       ************** *********************************************

consensus_14115#0      ACATATGATGATCTGTTGTCGACAAGTGAGCGTTTTCCGCAGCCAATCCCGTTATCTGAG 1914
consensus_14115#1      AC---------------------------------------------------------- 711
                       **                                                          

consensus_14115#0      ATGGTTGATTTTTTGGTTGACATATGGCATGAAGAAGGGCTCTATGATTAGTTGGGTTTG 1974
consensus_14115#1      ------------------------------------------------------------
                                                                                   

consensus_14115#0      ACTGTTTCTAATAGTTATCCTGAAAAAAAAAAAGAAAAGAAACTACAAATTAGTAAGCAG 2034
consensus_14115#1      ------------------------------------------------------------
                                                                                   

consensus_14115#0      GATTAATCTCAAATTGGGTATTGGAAAAGAAAACTGTAATTGTAAAAGCTACAAAATGGT 2094
consensus_14115#1      ------------------------------------------------------------
                                                                                   

consensus_14115#0      GTTGATATGATTTTGTGCTAGTTGGACCTCAAAAAATCAGATGTGTTGCTATCTGCTGAA 2154
consensus_14115#1      ------------------------------------------------------------
                                                                                   

consensus_14115#0      TGACCCTATGACATGTAACTGTCATAGGTAAAAACTGAAAGGCACATTAACATTGTTTGT 2214
consensus_14115#1      ------------------------------------------------------------
                                                                                   

consensus_14115#0      AAACACGGCAACTTCACAACAAAAAAAAAATTTCTTGAGGTTGAGGTCTCGAGGAGCATT 2274
consensus_14115#1      ------------------------------------------------------------
                                                                                   

consensus_14115#0      GGAAAATTTCCCAAATGCCAGAAAA 2299
consensus_14115#1      -------------------------