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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14118#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1744 fasta sequence
[TTTTTTTTTTTGGAGAAATTAACCTTGATCTCTGTTTCGTAGTCCCCAACATATAGGATTATTTCGTTAGTACAAACACGGAAGCCAGATATAATGGAGGGTTTGCAAACCAAATTTCTACGCCCTTCGTCCCAAAATAAGTTGAACTACACGCTGAGTTTATTTTGAGACAGAGTGAGTAATAACTAAACACAGCCACACAGGTACTACAAACACTTGCCAATGATGCATGCAAAATAAACTGCACCAAGTTAACAATAACACAAACTGGAGTTTCAGGCTAAGTTACATTAGTTATTTCGCGCTCTCACCTCAACCGTGACAACAACGTTCATCGCAACAGGGAAAATCTAGCACGCATAAATAGAAAACCGCTACTTGCCAACTACGTGCTTCTCATATAAGGCGACGATGTCCTTCTTGTTGGGATTCTTCAGTTGCAGGAGTTGAGCACCAAACCCATGCTTAGTGAGCTCCTGCTTCAGCTTCAGCACAGTGAACTTGATGTAGTCTTCAGTCTCCGTCTCCTGCGCTTGCTGGCTCCCGTTGTTAGTGTCTTCTCCTACAAATACAGAGCCACCGTCCTCGGTGTGATTGCTCTTAAACGGGCTCGTCGTGCTTTTTGATCGTTTCCTTCGCCTGCCAGTGTTGTCATCGTCGATATCCATATCATGGACAGACTCAGTAGCTTCACCCCTCAGGCGCCTTGCATGTGAGGCCTTAAGCTTGCTGTCCAGTGCGGTTTCATTGAACCGAACAGATGTCAGCTCTTGTTGGAGCATATCTAACTTGCTTTGAGTTGCCTGCAACTGCAGTGACAGAGCCTCAGCTCTCCTATTGGCCTCAGCGCAGGCTTCTCGTTCTGTCTCCAGTAGACTCTCAAGAACTTGAACTGTACTGGACCTTTGCTGGTTGCTCCGTTGCATCATCTCATCAATTTCCTTTTCCCGCTCGTCAACCCTTTGTTCAAGCGATGAAACCTTACATACAGCATCCTCGTCAGACTGACCAACTCGCTCAATTTCTTCCAGCATCTTATTCTTCTCTCTCTCCAGACCTTCAACCTGTCTCTCCATTCTTTCTATTAACGCAAGTCTCTCCATTGCTAGCCTCTGCGCTTCACCCTTATCCTTCTGGGAAGCAACAGCTTCTGCACGAGCTACGTCAGCCAATTCCGTTGCTCGTTTAGCCTCCCTTTCAGCTTCCTTGCACCGGCTGTCTGCCTCATCAAACCTCTTGCACTCTGTTAGATACTTCTCCTGAAGATGGTTTTTTTCTTGTTCCAAGATCTTCACTTCCTTCTCACGTGACTGAGCTTCAGTTCTAAAAGACTCCAAGCTAACAGTCAGTGATCTGATCTCTTCTTTCAAAGCCAGCGAATCTGACTCATGGTTCTTCAACTTTGCTTCAGTAGCCTCAAGCCTTGAGATCAAATTTGTGGCATGAATTTCGGTTTGGTTAATTTTTGTGTTTAATCTTGCGATCTCCTCTTCCTTCTCAGACAGTTGGCTAGCAAGTTCTGCCCTTAAAGCGTCTTCCCTTTCTTGCACTTTCTTATTAGTGCGTTCTTGTGCTACAGCTGCTCTTTGCAGAGCTGTTTTTGCCTCACTTACAGCAACTTCATATTTCCGTTTCCACTCCGATGCCTCTTCTTGAGCAGACTCAGCCTGTTCTCGCACAGCAGATAATCTGCCCTCACTGATATTTACCCTGGATTCCAGAGAAGCAATTTGAGACTTTAACT]
[+] EMBL CA762426 [TTTTTTTTTTTGGAGAAATTAACCTTGATCTCTGTTTCGTAGTCCCCAACATATAGGATTATTTCGTTAGTACAAACACGGAAGCCAGATATAATGGAGGGTTTGCAAACCAAATTTCTACGCCCTTCGTCCCAAAATAAGTTGAACTACACGCTGAGTTTATTTTGAGACAGAGTGAGTAATAACTAAACACAGCCACACAGGTACTACAAACACTTGCCAATGATGCATGCAAAATAAACTGCACCAAGTTAACAATAACACAAACTGGAGTTTCAGGCTAAGTTACATTAGTTATTTCGCGCTCTCACCTCAACCGTGACAACAACGTTCATCGCAACAGGGAAAATCTAGCACGCATAAATAGAAAACCGCTACTTGCCAACTACGTGCTTCTCATATAAGGCGACGATGTCCTTCTTGTTGGGATTCTTCAGTTGCAGGAGTTGAGCACCAAACCCATGCTTAGTGAGCTCCTGCTTCAGCTTCAGCACAGTGAACTTGATGTAGTCTTCAGTCTCCGTCTCCTGCGCTTGCTGGCTCCCGTTGTctcgtc ]
[+] EMBL CB644149 [ ATTTCTACGCCCTCCGACCCAAAATAAGTTGAACTACACGCTGAGTTTATTTTGAGACAGAGTGAGTAATAACTAAACACAGCCACACAGGTACTACAAACACTTGCCAATGATGCATGCAAAATAAACTGCACCAAGTTAACAATAACACAAACTGGAGTTTCAGGCTAAGTTACATTAGTTATTTCGCGCTCTCACCTCAACCGTGACAACAACGTTCATCGCAACAGGGAAAATCTAGCACGCATAAATAGAAAACCGCTACTTGCCAACTACGTGCTTCTCATATAAGGCGACGATGTCCTTCTTGTTGGGATTCTTCAGTTGCAGGAGTTGAGCACCAAACCCATGCTTAGTGAGCTCCTGCTTCAGCTTCAGCACAGTGAACTTGGTGTAGTCTTCAGTCTCCGTCTCCTGCGCTTGCTGGCTCCCGTTGTTAGTGTCTTCTCCTACAAATACAGAGCCACCGTCCTCGGTGTGATTGCTCTTAAACGGGCTCGTCGTGCTTTTTGATCGTTTCCTTCGCCTGCCAGTGTTGTCATCGTCGATATCCATATCATGGACAGACTCAGTAGCTTCACCCCTCAGGCGCCTTGCATGTGAGGCCTTAAGCTTGCTGTCCAGTGCGGTTTCATTGAACCGAACAGATGTCAGCTCTTGTTGGAGCATATCTAACTTGCTTTGAGTTGCCTGCAACTGCAGTGACAGAGCCTCAGCTCTCCTATTGGCCTCAGCGCAGGCTTCTCGTTCTGTCTCCAGTAGACTCTCAAGAACTTGAACTGTACTGGACCTTTGCTGGTTGCTCCGTTGCA ]
[-] EMBL BI118647 [ CTTGCCAATGATGCATGCAAAATAAACTGCACCAAGTTAACAATAACACAAACTGGAGTTTCAGGCTAAGTTACATTAGTTATTTCGCGCTCTCACCTCAACCGTGACAACAACGTTCATCGCAACAGGGAAAATCTAGCACGCATAAATAGAAAACCGCTACTTGCCAACTACGTGCTTCTCATATAAGGCGACGATGTCCTTCTTGTTGGGATTCTTCAGTTGCAGGAGTTGAGCACCAAACCCATGCTTAGTGAGCTCCTGCTTCAGCTTCAGCACAGTGAACTTGATGTAGTCTTCAGTCTCCGTCTCCTGCGCTTGCTGGCTCCCGTTGTTAGTGTCTTCTCCTACAAATACAGAGCCACCGTCCTCGGTGTGATTGCTCTTAAACGGGCTCGTCGTGCTTTTTGATCGTTTCCTTCGCCTGCCAGTGTTGTCATCGTCGATATCCATATCATGGACAGACTCAGTAGCTTCACCCCTCAGGCGCCTTGCATGTGAGGCCTTAAGCTTGCTGTCCAGTGCGGTTTCATTGAACCGAACAGATGTCAACTCTTGTTGGAGCATATCTAACTTGCTTTGAGTTGCCTGCAACTGCAGTGACAGAGCCTCAGCTCTCCTATTGGCCTCAGCGCAGGCTTCTCGTTCTGTCTCCAGTAGACTCTCAAGAAC ]
[-] EMBL BP185022 [ ACAACGTTCATCGCAACAGGGAAAATCTAGCACGCATAAATAGAAAACCGCTACTTGCCAACTACGTGCTTCTCATATAAGGCGACGATGTCCTTCTTGTTGGGATTCTTCAGTTGCAGGAGTTGAGCACCAAACCCATGCTTAGTGAGCTCCTGCTTCAGCTTCAGCACAGTGAACTTGGTGTAGTCTTCAGTCTCCGTCTCCTGCGCTTGCTGGCTCCCGTTGTTAGTGTCTTCTCCTACAAATACAGAGCCACCGTCCTCGGTGTGATTGCTCTTAAACGGGCTCGTCGTGCTTTTTGATCGTTTCCTTCGCCTGCCAGTGTTGTCATCGTCGATATCCATATCATGGACAGACTCAGTAGCTTCACCCCTCAGGCGCCTTGCATGTGAGGCCTTAAGCTTGCTGTCCAGTGCGGTTTCATTGAACCGAACAGATGTCAGCTCTTGTTGGAGCATATCTAACTTGCTTTGAGTTGCCTGCAACTGCAGTGACAGAGCCTCAGCTCTCCTATTGGCCTCAGCGCAGGCTTCTCGTTCTGTCTCCAGTAGACTCTCAAGAACTTGAACTGTACTGGACCTTTGCTGGTTGCTCCGTTGCATCATCTCATCAATTTCCTTTTCCCGCTCGTCAACCCTTTGTTCAAGCGATGAAACCTTACATACAGCATCCTCGT ]
[-] EMBL CB644148 [ CTGGACCTTTGCTGGTTGCTCCGTTGCATCATCTCATC ATTTCCTTTTCCCGCTCGTCAACCCTTTGTTCAAGCGATGAAACCTTACATACAGCATCCTTCTCAGACTGACCAACTCGCTCAATTTCTTCCAGCATCTTATTCTTCTCTCTCTCCAGACCTTCAACCTGTCTCTCCATTCTTTCTATTAACGCAAGTCTCTCCATTGCTAGCCTCTGCGCTTCACCCTTATCCTTCTGGGAAGCAACAGCTTCTGCACGAGCTACGTCAGCCAATTCCGTTGCTCGTTTAGCCTCCCTTTCAGCTTCCTTGCACCGGCTGTCTGCCTCATCAAACCTCTTGCACTCTGTTAGATACTTCTCCTGAAGATGGTTTTTTTCTTGTTCCAAGATCTTCACTTCCTTCTCACGTGACTGAGCTTCAGTTCTAAAAGACTCCAAGCTAACAGTCAGTGATCTGATCTCTTCTTTCAAAGCCAGCGAATCTGACTCATGGTTCTTCAACTTTGCTTCAGTAGCCTCAAGCCTTGAGATCAAATTTGTGGCATGAATTTCGGTTTGGTTAATTTTTGTGTTTAATCTTGCGATCTCCTCTTCCTTCTCAGACAGTTGGCTAGCAAGTTCTGCCCTTAAAGCGTCTTCCCTTTCTTGCACTTTCTTATTAGTGCGTTCTTGTGCTACAGCTGCTCTTTGCAGAGCTGTTTTTGCCTCACTTACAGCAACTTCATATTTCCGTTTCCACTCCGATGCCTCTTCTTGAGCAGACTCAGCCTGTTCTCGCACAGCAGATAATCTGCCCTCACTGATATTTACCCTGGATTCCAGAGAAGCAATTTGAGACTTTAACT]
consensusID : consensus_14118#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 876 fasta sequence
[AGCTCGCCACCAGCCCCGTCGCCGGCAGGCTTGGCCCCGTCTCCCACCGCCGAGGTGACCCCTCCCCCCAGCGCCGCCGCCGTCGTCTACCCCGACGCCGGGTGGGTCGACGCCGCCGCCGTGGCAGCCGTCGACGAGTTCTACTGAGATCGAGGCTGATGAGATTCGTCGACCACCTCATTAATTTATTACCCGTCCATTAAAGGGACTCACCATTCCTACTCCTCCTCTCCTGATCTCCTACTTTTCCTTCTTCATCTGCGGTGGCGGTGTCGAGCTGTTTATTATATACCTCTCTCTATCTATGTTTTGTTTCATTGTATGGGGCATTTTTATTTCCATTCATGCATTTGAGACACCATGTGTGTGGGCGTTTGGCGTGGACAGATTGGTTGGATGGGCTGGTGTTGCGCTGCTTCTACATTGTACTATACATCTTCCGGTGGTTAAAACTCGAAGAGGATGGGGTGTCAAGAGATATCCTATTTGGTGGTTATATAATAATTCTTGAGGGGGGGGCCCGGTTCCCAAATTTGCCCTTAAAAGAAGCCGTATTACCCCTCCCTTGATTGGCCCCTGGTTTTAACAACCTCCTTAATGGGAAAAACCCTTGAGGGTTACCAAACTTTATTCGCTTTTGAAAAAACATACCCCCTTTGGAAAAACCTGGGTTATTTAATAAAAAAGGGCCCTCTCTGTATGGGGCTTTTCCAAATATTTGGGTATGTCTTAATTTGGCAAATAGGGCCCCCCCCTTTAATACGCTCCAATTAAAAAACGGGCGGGTGGGGTTGGGTTTATTTGCAACATTGCCCCTTTTTAAAATTTGCATAAAAGCCCTTTTACGCCCCGCAGGCTTTTTAAATTTACATAGCG]
[+] EMBL CA758446 [AGCTCGCCACCAGCCCCGTCGCCGGCAGGCTTGGCCCCGTCTCCCACCGCCGAGGTGACCCCTCCCCCCAGCGCCGCCGCCGTCGTCTACCCCGACGCCGGGTGGGTCGACGCCGCCGCCGTGGCAGCCGTCGACGAGTTCTACTGAGATCGAGGCTGATGAGATTCGTCGACCACCTCATTAATTTATTACCCGTCCATTAAAGGGACTCACCATTCCTACTCCTCCTCTCCTGATCTCCTACTTTTCCTTCTTCATCTGCGGTGGCGGTGTCGAGCTGTTTATTATATACCTCTCTCTATCTATGTTTTGTTTCATTGTATGGGGCATTTTTATTTCCATTCATGCATTTGAGACACCATGTGTGTGGGCGTTTGGCGTGGACAGATTGGTTGGATGGGCTGGTGTTGCGCTGCTTCTACATTGTACTATACATCTTCCGGTGGTTAAAACTCGAAGAGGATGGGGTGTCAAGAGATATCCTATTTGGTGGTTATATAATAATTCTTGAGGGGGGGGCCCGGTTCCCAAATTTGCCCTTAAAAGAAGCCGTATTACCCCTCCCTTGATTGGCCCCTGGTTTTAACAACCTCCTTAATGGGAAAAACCCTTGAGGGTTACCAAACTTTATTCGCTTTTGAAAAAACATACCCCCTTTGGAAAAACCTGGGTTATTTAATAAAAAAGGGCCCTCTCTGTATGGGGCTTTTCCAAATATTTGGGTATGTCTTAATTTGGCAAATAGGGCCCCCCCCTTTAATACGCTCCAATTAAAAAACGGGCGGGTGGGGTTGGGTTTATTTGCAACATTGCCCCTTTTTAAAATTTGCATAAAAGCCCTTTTACGCCCCGCAGGCTTTTTAAATTTACATAGCG]
consensusID : consensus_14118#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 438 fasta sequence
[GTTAACCCCCCCTNAAGCTCCTTGAACGGNTTGTCTGCCTAAAAAAACCTCTTGAACTCTGGTAAGANA-CTCCCCTGAAGATGGTTTTTTCCTTGTCCAAAGACCTAAACTCCCTCCTCACCGTGACTGAGCTTCAGTCCTAAAAGACTCCAAGCTAACAGTCAGTGATCTGATCCCTTCTTTCAAAGCCAGCGAATCTGACTCATGGTTCTTCAACTTTGCTTCAGTAGCCTCAAGCCTTGAGATCAAATTTGTGGCATGAATTTCGGTTTGGTTAATTTTTGTGTTTAATCTTGCGATCTCCTCTTCCTTCTCAGACAGTTGGCTAGCAAGTTCTGCCCTTAAAGCGTCTTCCCTTTCTTGCACTTTCTTATTAGTGCGTTCTTGTGCTAGGGTTTGGGAGGAGAGTGTGTGCTTGGGGAGAAGGTGGCTACTAGC]
[-] EMBL OSS4244A [GTTAACCCCCCCTNAAGCTCCTTGAACGGNTTGTCTGCCTAAAAAAACCTCTTGAACTCTGGTAAGANA CTCCCCTGAAGATGGTTTTTTCCTTGTCCAAAGACCTAAACTCCCTCCTCACCGTGACTGAGCTTCAGTCCTAAAAGACTCCAAGCTAACAGTCAGTGATCTGATCCCTTCTTTCAAAGCCAGCGAATCTGACTCATGGTTCTTCAACTTTGCTTCAGTAGCCTCAAGCCTTGAGATCAAATTTGTGGCATGAATTTCGGTTTGGTTAATTTTTGTGTTTAATCTTGCGATCTCCTCTTCCTTCTCAGACAGTTGGCTAGCAAGTTCTGCCCTTAAAGCGTCTTCCCTTTCTTGCACTTTCTTATTAGTGCGTTCTTGTGCTAGGGTTTGGGAGGAGAGTGTGTGCTTGGGGAGAAGGTGGCTACTAGC]
[-] EMBL OSS2641A [ cACTCT GTTAGATACCTCTCCTGAAGATGGTTTTTTCC TGTTCCAAGATCTTCACTTCCTTCTCA CGTGACTGAGCTTCAGTTCTAAAAGACTCCAAGCTAACAGTCAGTGATCTGATCTCTTCTTTCAAAGCCAGCGAATCTGACTCATGGTTCTTCAACTTTGCTTCAGTAGCCTCAAGCCTTGAGATCAAATTTGTGGCATGAATTTCGGTTTGGTTAATTTTTGTGTTTAATCTTGCGATCTCCTCTTCCTTCTCAGACAGTTGGCTAGCAAGTTCTGCCCTTAAAGCGTCTTCCCTTTCTTGCACTTTCTTATTAGTGCGTTCTTGTGCTAGGGTTTGGGAGGAGAGTGTGTGCTTGGGGAGAAGGTGGCTACTAGC]
consensusID : consensus_14118#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 323 fasta sequence
[TCAAGCTAGTAGCCACCTTCTCCCCAAGCACACACTCTCCTCCCAAACCCTAGCACCAGCTAGCTCTCTCACTCTACTCCAATGGCGCGCTTCCAGATCGTGGCCTTGGCCATGGCGATGCTCTTCGCCGCCGCATCAGCTCAGGCCCCGGCGGCCACCCCGACGCCCGCTCCCAAGGCGTCCCCTCCTCCGGCGACGCCGCCGCCGACGCCTGCGCCGGTGTCAGCGCCCCCGGCTCAGGCCCCGGCCACTCCTCCCCCGGCTCCGGCTCCCGCCCCCAAGGCCTCAGCTCCGGCTCCCGCCCCCAAGGCCTCGGCTCCGGC]
[+] EMBL AU173090 [TCAAGCTAGTAGCCACCTTCTCCCCAAGCACACACTCTCCTCCCAAACCCTAGCACCAGCTAGCTCTCTCACTCTACTCCAATGGCGCGCTTCCAGATCGTGGCCTTGGCCATGGCGATGCTCTTCGCCGCCGCATCAGCTCAGGCCCCGGCGGCCACCCCGACGCCCGCTCCCAAGGCGTCCCCTCCTCCGGCGACGCCGCCGCCGACGCCTGCGCCGGTGTCAGCGCCCCCGGCTCAGGCCCCGGCCACTCCTCCCCCGGCTCCGGCTCCCGCCCCCAAGGCCTCAGCTCCGGCTCCCGCCCCCAAGGCCTCGGCTCCGGC]
[+] EMBL AU164290 [ AGCTAGTAGCCACCTTCTCCCCAAGCACACACTCTCCTCCCAAACCCTAGCACCAGCTAGCTCTCTCACTCTACTCCAATGGCGCGCTTCCAGATCGTGGCCTTGGCCATGGCGATGCTCTTCGCCGCCGCATCAGCTCAGGCCCCGGCGGCCACCCCGACGCCCGCTCCCAAGGCGTCCCCTCCTCCGGCGACGCCGCCGCCGACGCCTGCGCCGGTGTCAGCGCCCCCGGCTCAGGCCCCGGCCACTCCTCCCCCGGCTCCGGCTCCCGCCCCCAAGGCCTCAGCTCCGGCTCCCGCCCCCAAGGCCTCGGCTCCGGC]
[+] EMBL C74136 [ AGCTAGTAGCCACCTTCTCCCCAAGCACACACTCTCCTCCCAAACCCTAGCACCAGCTAGCTCTCTCACTCTACTCCAATGGCGCGCTTCCAGATCGTGGCCTTGGCCATGGCGATGCTCTTCGCCGCCGCATCAGCTCAGGCCCCGGCGGCCACNCCGACGCCCGCTCCCAAGGCGTCCCCTCCTCCGGCGACG CGCNGCCGACGCCTGCGCCGGTGTCAGCGCCCCCGGCTCAGGCC ]
[+] EMBL AU064360 [ GCTAGTAGCCACCTTCTCCCCAAGCACACACTCTCCTCCCAAACCCTAGCACCAGCTAGCTCTCTCACTCTACTCCAATGGCGCGCTTCCAGATCGTGGCCTTGGCCATGGCGATGCTCTTCGCCGCCGCATCAGCTCAGGCCCCGGCGGCCACCCCGACGNCCGNTCCCAAGGCGTCCCCTGCTCCGGCGACG CGTNGACGACGNCTGCGCCGGTGTCAGCGGCCCCGGCTCAGGTCCCGG ]
[+] EMBL AU064359 [ GCTAGTAGCCACCTTCTCCCCAAGCACACACTCTCCTCCCAAACCCTAGCACCAGCTAGCTCTCTCACTCTACTCCAATGGCGCGCTTCCAGATCGTGGCCTTGGCCATGGCGATGCTCTTCGCCGCCGCATCAGCTCAGGCCCCGGCGGCCACCCCGACGCCCGCTCCCAAGGCGTCCCCTNCTCCGGCGACG CGNCGCCGACGNCTGCGCCGGTGTCAGCGCCCCCGGCTCAGGC ]
[+] EMBL AU164482 [ AGTAGCCACCTTCTCCCCAAGCACACACTCTCCTCCCAAACCCTAGCACCAGCTAGCTCTCTCACTCTACTCCAATGGCGCGCTTCCAGATCGTGGCCTTGGCCATGGCGATGCTCTTCGCCGCCGCATCAGCTCAGGCCCCGGCGGCCACCCCGACGCCCGCTCCCAAGGCGTCCCCTCCTCCGGCGACGCCGCCGCCGACGCCTGCGCCGGTGTCAGCGCCCCCGGCTCAGGCCCCGGCCACTCCTCCCCCGGCTCCGGCTCCCGCCCCCAAGGCCTCAGCTCCGGCTCCCGCCCCCAAGGCCTCGGCTCCGGC]
consensusID : consensus_14118#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 306 fasta sequence
[GTACACCACCTCAAGCTAGTAGCCACCTTCTCCCCAAGCACACACTCTCCTCCCCCCAGCGCCGCCGCCGGCGTCTCCCCCGCCGCCGCGTGGGTCGCCGCCGCCGCCGTGGCCGCCGCCGCCGCGTTCTACTGAGATCGAGGCTGATGAGATCCGCCGACCACCTCATTAATTTATTACCCGTCCATCAGAGGGACCCACCATTCCTCCTCCTCCTCTCCTGATCTCCTCCTTTTCCTTCTTCATCTGTGGTGGTGGTGTTGAGCTGTTTATTTTATTTCTCTCTCTATCTTTTTTTTCTTCCAT]
[+] EMBL AK058776 [GTACACCACCTCAAGCTAGTAGCCACCTTCTCCCCAAGCACACACTCTCCTCCCCCCAGCGCCGCCGCCGGCGTCTCCCCCGCCGCCGCGTGGGTCGCCGCCGCCGCCGTGGCCGCCGCCGCCGCGTTCTACTGAGATCGAGGCTGATGAGATCCGCCGACCACCTCATTAATTTATTACCCGTCCATCAGAGGGACCCACCATTCCTCCTCCTCCTCTCCTGATCTCCTCCTTTTCCTTCTTCATCTGTGGTGGTGGTGTTGAGCTGTTTATTTTATTTCTCTCTCTATCTTTTTTTTCTTCCAT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_14118#1 ------------------------------------------------------------
consensus_14118#4 ------------------------------------------------------------
consensus_14118#0 TTTTTTTTTTTGGAGAAATTAACCTTGATCTCTGTTTCGTAGTCCCCAACATATAGGATT 60
consensus_14118#2 ------------------------------------------------------------
consensus_14118#3 ------------------------------------------------------------
consensus_14118#1 ------------------------------------------------------------
consensus_14118#4 ------------------------------------------------------------
consensus_14118#0 ATTTCGTTAGTACAAACACGGAAGCCAGATATAATGGAGGGTTTGCAAACCAAATTTCTA 120
consensus_14118#2 ------------------------------------------------------------
consensus_14118#3 ------------------------------------------------------------
consensus_14118#1 ------------------------------------------------------------
consensus_14118#4 ------------------------------------------------------------
consensus_14118#0 CGCCCTTCGTCCCAAAATAAGTTGAACTACACGCTGAGTTTATTTTGAGACAGAGTGAGT 180
consensus_14118#2 ------------------------------------------------------------
consensus_14118#3 ------------------------------------------------------------
consensus_14118#1 ------------------------------------------------------------
consensus_14118#4 ------------------------------------------------------------
consensus_14118#0 AATAACTAAACACAGCCACACAGGTACTACAAACACTTGCCAATGATGCATGCAAAATAA 240
consensus_14118#2 ------------------------------------------------------------
consensus_14118#3 ------------------------------------------------------------
consensus_14118#1 ------------------------------------------------------------
consensus_14118#4 ------------------------------------------------------------
consensus_14118#0 ACTGCACCAAGTTAACAATAACACAAACTGGAGTTTCAGGCTAAGTTACATTAGTTATTT 300
consensus_14118#2 ------------------------------------------------------------
consensus_14118#3 ------------------------------------------------------------
consensus_14118#1 ------------------------------------------------------------
consensus_14118#4 ------------------------------------------------------------
consensus_14118#0 CGCGCTCTCACCTCAACCGTGACAACAACGTTCATCGCAACAGGGAAAATCTAGCACGCA 360
consensus_14118#2 ------------------------------------------------------------
consensus_14118#3 ------------------------------------------------------------
consensus_14118#1 ------------------------------------------------------------
consensus_14118#4 ------------------------------------------------------------
consensus_14118#0 TAAATAGAAAACCGCTACTTGCCAACTACGTGCTTCTCATATAAGGCGACGATGTCCTTC 420
consensus_14118#2 ------------------------------------------------------------
consensus_14118#3 ------------------------------------------------------------
consensus_14118#1 ------------------------------------------------------------
consensus_14118#4 ------------------------------------------------------------
consensus_14118#0 TTGTTGGGATTCTTCAGTTGCAGGAGTTGAGCACCAAACCCATGCTTAGTGAGCTCCTGC 480
consensus_14118#2 ------------------------------------------------------------
consensus_14118#3 ------------------------------------------------------------
consensus_14118#1 ------------------------------------------------------------
consensus_14118#4 ------------------------------------------------------------
consensus_14118#0 TTCAGCTTCAGCACAGTGAACTTGATGTAGTCTTCAGTCTCCGTCTCCTGCGCTTGCTGG 540
consensus_14118#2 ------------------------------------------------------------
consensus_14118#3 ------------------------------------------------------------
consensus_14118#1 ------------------------------------------------------------
consensus_14118#4 ------------------------------------------------------------
consensus_14118#0 CTCCCGTTGTTAGTGTCTTCTCCTACAAATACAGAGCCACCGTCCTCGGTGTGATTGCTC 600
consensus_14118#2 ------------------------------------------------------------
consensus_14118#3 ------------------------------------------------------------
consensus_14118#1 ------------------------------------------------------------
consensus_14118#4 ------------------------------------------------------------
consensus_14118#0 TTAAACGGGCTCGTCGTGCTTTTTGATCGTTTCCTTCGCCTGCCAGTGTTGTCATCGTCG 660
consensus_14118#2 ------------------------------------------------------------
consensus_14118#3 ------------------------------------------------------------
consensus_14118#1 ------------------------------------------------------------
consensus_14118#4 ------------------------------------------------------------
consensus_14118#0 ATATCCATATCATGGACAGACTCAGTAGCTTCACCCCTCAGGCGCCTTGCATGTGAGGCC 720
consensus_14118#2 ------------------------------------------------------------
consensus_14118#3 ------------------------------------------------------------
consensus_14118#1 ------------------------------------------------------------
consensus_14118#4 ------------------------------------------------------------
consensus_14118#0 TTAAGCTTGCTGTCCAGTGCGGTTTCATTGAACCGAACAGATGTCAGCTCTTGTTGGAGC 780
consensus_14118#2 ------------------------------------------------------------
consensus_14118#3 ------------------------------------------------------------
consensus_14118#1 ------------------------------------------------------------
consensus_14118#4 ------------------------------------------------------------
consensus_14118#0 ATATCTAACTTGCTTTGAGTTGCCTGCAACTGCAGTGACAGAGCCTCAGCTCTCCTATTG 840
consensus_14118#2 ------------------------------------------------------------
consensus_14118#3 ------------------------------------------------------------
consensus_14118#1 ------------------------------------------------------------
consensus_14118#4 ------------------------------------------------------------
consensus_14118#0 GCCTCAGCGCAGGCTTCTCGTTCTGTCTCCAGTAGACTCTCAAGAACTTGAACTGTACTG 900
consensus_14118#2 ------------------------------------------------------------
consensus_14118#3 ------------------------------------------------------------
consensus_14118#1 ------------------------------------------------------------
consensus_14118#4 ------------------------------------------------------------
consensus_14118#0 GACCTTTGCTGGTTGCTCCGTTGCATCATCTCATCAATTTCCTTTTCCCGCTCGTCAACC 960
consensus_14118#2 ------------------------------------------------------------
consensus_14118#3 ------------------------------------------------------------
consensus_14118#1 ------------------------------------------------------------
consensus_14118#4 ------------------------------------------------------------
consensus_14118#0 CTTTGTTCAAGCGATGAAACCTTACATACAGCATCCTCGTCAGACTGACCAACTCGCTCA 1020
consensus_14118#2 ------------------------------------------------------------
consensus_14118#3 ------------------------------------------------------------
consensus_14118#1 ------------------------------------------------------------
consensus_14118#4 ------------------------------------------------------------
consensus_14118#0 ATTTCTTCCAGCATCTTATTCTTCTCTCTCTCCAGACCTTCAACCTGTCTCTCCATTCTT 1080
consensus_14118#2 ------------------------------------------------------------
consensus_14118#3 ------------------------------------------------------------
consensus_14118#1 ------------------------------------------------------------
consensus_14118#4 ------------------------------------------------------------
consensus_14118#0 TCTATTAACGCAAGTCTCTCCATTGCTAGCCTCTGCGCTTCACCCTTATCCTTCTGGGAA 1140
consensus_14118#2 ------------------------------------------------------------
consensus_14118#3 ------------------------------------------------------------
consensus_14118#1 ------------------------------------AGCTCGCCACCAGCCCCGTCGCCG 24
consensus_14118#4 ----------------------------------------------GTACACCACCTCAA 14
consensus_14118#0 GCAACAGCTTCTGCACGAGCTACGTCAGCCAATTCCGTTGCTCGTTTAGCCTCCCTTTCA 1200
consensus_14118#2 --------------------------------------------GTTAACCCCCCCTNAA 16
consensus_14118#3 --------------------------------------------------------TCAA 4
consensus_14118#1 GCAGGCTTGGCCCCGTCTCCCACCGCCGAGGTGACCC----CTCCCCCCAGCGCCGCCGC 80
consensus_14118#4 GCTAG--TAGCCACCTTCTCCCCAAGCACACACTCTC----CTCCCCCCAGCGCCGCCGC 68
consensus_14118#0 GCTTCCTTGCACCGGCTGTCTGCCTCATCAAACCTCTTGCACTCTGTTAGATACTTCTCC 1260
consensus_14118#2 GCT-CCTTGAACGGNTTGTCTGCCTAAAAAAACCTCTTGAACTCTGGTAAGANACTCCCC 75
consensus_14118#3 GCTAG--TAGCCACCTTCTCCCCAAGCACACACTCTC------CTCCCAAACCCTAGCAC 56
** * * * * * *
consensus_14118#1 CG----TCGTCTACCCCGACGCCGGGTGGGTCGACGCCGCCGCCGTGGCAGCCGTCGACG 136
consensus_14118#4 CG----GCGTCTCCCCCGCCGCCGCGTGGGTCGCCGCCGCCGCCGTGGCCGCCGCCGCCG 124
consensus_14118#0 TGAAGATGGTTTTTTTCTTGTTCCAAGATCTTCACTTCCTTCTCAC-GTGACTGAGCTTC 1319
consensus_14118#2 TGAAGATGGTTTTTTCCTTGTCCAAAGACCTAAACTCCCTCCTCACCGTGACTGAGCTTC 135
consensus_14118#3 CA------GCTAGCTCTCTCAC--------TCTACTCCAATGGCGC-GCTTCCAGATCGT 101
* * * * * * *
consensus_14118#1 AGTTCTACTGAGATCGAGGCTGATGAGATTCGTCGACCACCTCATTAATTTATTACCCGT 196
consensus_14118#4 CGTTCTACTGAGATCGAGGCTGATGAGATCCGCCGACCACCTCATTAATTTATTACCCGT 184
consensus_14118#0 AGTTCTAAAAGACTCCAAGCTAACA------GTCAGTGATCTGATCTCTTCTTTCAAAGC 1373
consensus_14118#2 AGTCCTAAAAGACTCCAAGCTAACA------GTCAGTGATCTGATCCCTTCTTTCAAAGC 189
consensus_14118#3 GGCCTTGGCCATGGCGATGCTC----------TTCGCCGCCGCATCAGCTCAGGCCCCGG 151
* * * * *** * ** * *
consensus_14118#1 CCATTAAAGGGACTCACCATTCCTACTCCTCCTCTCCTGATCTCCTACTTTTCCTTCTTC 256
consensus_14118#4 CCATCAGAGGGACCCACCATTCCTCCTCCTCCTCTCCTGATCTCCTCCTTTTCCTTCTTC 244
consensus_14118#0 CAGCGAATCTGACTCATGGTTCTTCAACTTTGCTTCAGTAGCCTCAAGCCTTGAGATCAA 1433
consensus_14118#2 CAGCGAATCTGACTCATGGTTCTTCAACTTTGCTTCAGTAGCCTCAAGCCTTGAGATCAA 249
consensus_14118#3 CGGCCACCCCGACGCCCGCTCCCAAGGCGTCCCCTCCT--CCGGCGACGCCGCCGCCGAC 209
* * *** * * * * * ** * *
consensus_14118#1 ATCTGCGGTGGCGGTGTCGAGCT--GTTTATTATATA-CCTCTC-TCTATCTATGTTTTG 312
consensus_14118#4 ATCTGTGGTGGTGGTGTTGAGCT--GTTTATTTTATT-TCTCTC-TCTATCTTTTTTTTC 300
consensus_14118#0 ATTTGTGGCATGAATTTCGGTTT--GGTTAATTTTTG-TGTTTAATCTTGCGATCTCCTC 1490
consensus_14118#2 ATTTGTGGCATGAATTTCGGTTT--GGTTAATTTTTG-TGTTTAATCTTGCGATCTCCTC 306
consensus_14118#3 GCCTGCGCCGGTGTCAGCGCCCCCGGCTCAGGCCCCGGCCACTCCTCCCCCGGCTCCGGC 269
** * * * * * * ** *
consensus_14118#1 TTTCATTGTATGGGGCATTTTTATTTCCATTCATGCATTTGAGACACCATG--TGTGTGG 370
consensus_14118#4 TTCCAT------------------------------------------------------ 306
consensus_14118#0 TTCCTTCTCA---GACAGTTGGCTAGCAAGTTCTGCCCTTAAAGCGTCTTCCCTTTCTTG 1547
consensus_14118#2 TTCCTTCTCA---GACAGTTGGCTAGCAAGTTCTGCCCTTAAAGCGTCTTCCCTTTCTTG 363
consensus_14118#3 TCCCGCCCCC---AAGGCCTCAGCTCCGGCTCCCGCCCCCAAGGCCTCGGCTCCGGC--- 323
* *
consensus_14118#1 GCGTTTGGCGTGGACAGATTGGTTGGATGGGCTGGTGTTGCGCTGCTTCTACATTGTACT 430
consensus_14118#4 ------------------------------------------------------------
consensus_14118#0 CACTTTCTTATTAGTGCGTTCTTGTGCTACAGCTGCTCTTTGCAGAGCTGTTTTTGCCTC 1607
consensus_14118#2 CACTTTCTTATTAGTGCGTTCTTGTGCTAGGGTT-----TGGGAGGAGAGTGTGTGCTTG 418
consensus_14118#3 ------------------------------------------------------------
consensus_14118#1 ATACATCTTCCGGTGGTTAAAACTCGAAGAGGATGGGGTGTCAAGAGATATCCTATTTGG 490
consensus_14118#4 ------------------------------------------------------------
consensus_14118#0 ACTTACAGCAACTTCATATTTCCGTTTCCACTCCGATGCCTCTTCTTGAGCAGACTCAGC 1667
consensus_14118#2 GGGAGAAGGTGGCTACTAGC---------------------------------------- 438
consensus_14118#3 ------------------------------------------------------------
consensus_14118#1 TGGTTATATAATAATTCTTGAGGGGGGGGCCCGGTTCCCAAATTTGCCCTTAAAAGAAGC 550
consensus_14118#4 ------------------------------------------------------------
consensus_14118#0 CTGTTCTCGCACAGCAGATAATCTGCCCTCACTGATATTTACCCTGGATTCCAGAGAAGC 1727
consensus_14118#2 ------------------------------------------------------------
consensus_14118#3 ------------------------------------------------------------
consensus_14118#1 CGTATTACCCCTCCCTTGATTGGCCCCTGGTTTTAACAACCTCCTTAATGGGAAAAACCC 610
consensus_14118#4 ------------------------------------------------------------
consensus_14118#0 AATTTGAGACTTTAACT------------------------------------------- 1744
consensus_14118#2 ------------------------------------------------------------
consensus_14118#3 ------------------------------------------------------------
consensus_14118#1 TTGAGGGTTACCAAACTTTATTCGCTTTTGAAAAAACATACCCCCTTTGGAAAAACCTGG 670
consensus_14118#4 ------------------------------------------------------------
consensus_14118#0 ------------------------------------------------------------
consensus_14118#2 ------------------------------------------------------------
consensus_14118#3 ------------------------------------------------------------
consensus_14118#1 GTTATTTAATAAAAAAGGGCCCTCTCTGTATGGGGCTTTTCCAAATATTTGGGTATGTCT 730
consensus_14118#4 ------------------------------------------------------------
consensus_14118#0 ------------------------------------------------------------
consensus_14118#2 ------------------------------------------------------------
consensus_14118#3 ------------------------------------------------------------
consensus_14118#1 TAATTTGGCAAATAGGGCCCCCCCCTTTAATACGCTCCAATTAAAAAACGGGCGGGTGGG 790
consensus_14118#4 ------------------------------------------------------------
consensus_14118#0 ------------------------------------------------------------
consensus_14118#2 ------------------------------------------------------------
consensus_14118#3 ------------------------------------------------------------
consensus_14118#1 GTTGGGTTTATTTGCAACATTGCCCCTTTTTAAAATTTGCATAAAAGCCCTTTTACGCCC 850
consensus_14118#4 ------------------------------------------------------------
consensus_14118#0 ------------------------------------------------------------
consensus_14118#2 ------------------------------------------------------------
consensus_14118#3 ------------------------------------------------------------
consensus_14118#1 CGCAGGCTTTTTAAATTTACATAGCG 876
consensus_14118#4 --------------------------
consensus_14118#0 --------------------------
consensus_14118#2 --------------------------
consensus_14118#3 --------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||