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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14119#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 2591 fasta sequence
[ATGGACACGTTGCTCATGCTGCTTAACTGAATCAGGTTCCCTTCCCTCTGCTTGCTTCACGAACTCGCGGAAATCCCGTCCCCTCCCAAAATCTCACCAACGAGTCCACCCCAAATCCATCCACGAATCTCTTCCTCACTCCAACTGCCTCCCTCCGCCGTCAAAATCCAATCTTTCCTCTCACCTCCGCCGCTTTCGGCACGCCCCTTCAACCCCAAGATCGATACTCTCTCCACCAATCCGATCCAATCCGCAGCTGGGTTCCACGAATTGCAAAGGTCTAGGCGCGGATTGGAGCATGGGGCTCCGATCCCCCAACTCGATGCTGTGGCTAGTACTACTGGTGTGGGCGGCGCTGCTGTGCGGTAGCTGCCATGGGAGGTTCGTGGTGGAGAAGAACAGCCTCAAGGTGACGTCGCCCAGCGACATGAAGGGCACCTACGAGTGCGCCATTGGCAACTTCGGCGTGCCCCAGTACGGCGGCACCATGGTCGGCGTCGTCGCCTACCCCAAGGCCAACAAGAAGGCCTGCAAGAGCTTCGACGATTTTGACATCTCCTACAAGGCCAAACCGGGCTCACTCCCCACCTTCCTCCTCGTCGATAGGGGAGATTGCTTTTTCACAAAGAAGGCATGGAATGCACAAAACGCAGGAGCAGCAGCCATCCTTGTTGCTGATGACAAGACTGAACCCCTGATTACAATGGACACGCCTGAAGAGAGTGGAAATACAGACTATTTAGAGAATATCACCATTCCTTCTGCGCTGATAACCAAGAGCTTTGGGGACAAGCTCAAGAAAGCAATTGATAATGGTGACATGGTTAATGTGAATTTGGATTGGAGGGAGTCCCTGCCTCACCCTGATGAGCGTGTTGAGTACGAATTTTGGACTAACAGTAATGATGAGTGTGGCCCTAAATGTGATAGCCAGATTGATTTTGTCAAGAGCTTCAAAGGAGCAGCACAGGTACTTGAGAAGAAGGGATACACACAGTTCACTCCTCATTACATTACCTGGTATTGCCCAGATTCCTTCATTCTAAGCAAGCAGTGCAAGTCCCAGTGTATCAACCATGGGAGATATTGTGCACCTGACCCGGAACAGGATTTCAGCAAAGGGTATGATGGGAAAGATGTGGTAGTCCAGAATTTACGTCAAGTCTGTGTTTATAAAGTTGCTAAGGAGCATGGAAAACCTTGGCTGTGGTGGGACTACGTGACAGATTTTGCAATCCGGTGCCCAATGAAGGAAAAGAAGTACACCAAGGAATGCGCTGATGGAGTTATCAAGTCACTTGGTCTTGATCACAAAGCCATAGATAAGTGCATTGGTGATCCAGATGCTGATAAAGAAAATCCTGTGCTGAAAGCTGAACAGGATGCACAGATTGGCAAGGGCTCTCGTGGTGATGTTACCATCTTACCGACTCTTGTAATCAACAATAGACAATACAGAGGGAAACTTGATAAAGGAGCGGTTCTTAAGGCAATTTGTGCTGGTTTTCGAGAAACCACTGAACCAGCTGTTTGCTTGAGTGAAGATATACAAACAAATGAGTGCTTGGA-GAACAATGGTGGCTGTTGGCAAGACAAGGCTGCTAACATCTCTGCATGCAAGGACACTTTTCGT-GGAAGAGTTTGTGAATGTCCAGTTGTGAAAGGTGTTAAATTTGTTGGTGATGGCTACACTCACTGTGAAGCTTCGGGATCTGGCCATTGTGAAATTAACAATGGAGGGTGCTGGAAGGATTCCAGGCATGGCCGGACATATTCTGCCTGCACGAATGATGGTTGTAAATGTCCGGATGGGTTCAAAGGTGATGGAGTCCACAAATGCGAAGATATTGATGAATGCAAGGAAAGGACTGCATGCCAGTGCAAGGAATGTAAATGCAAGAACACATGGGGAAGCTATGAGTGCGGTTGCAGTGGCGGCTTGCTTTATATGAAGGAGCATGATACATGCATAAGCAAAAATGCAGCAACAGAGGTAGGATGGAAC-TTCTTGTGGGTGATCTTCTTTGGCCTAGTGGTAGCCGGCATTGCAGGATACGCAGTATACAAGTACAGGATCCGGAGGTACATGGATTCAGAGATCCGCGCCATCATGGCCCAGTACATGCCCCTGGACAACCAAGGAGATGTTCCCAATCATTCTCACCATATCGAGCTATGAAAAGAGTGAGGATAGCATGCAACTTCCCCCCATG-TTGCCCAAATGGGATGAGAAGAGGTGAACAACTCCTGGAGATCATGACACAGCCTGACGATATGTGTAGTAGTATCACTCTGACGATCTTATGTTTAGCAAATTTAGCCCATGTAAATTTCTGGATTATCCTGTGGCCGCATAATTTCAATCGTACCTGGCTGCTTTGCTCCCATATAGCGCTGGGGAAATATGGAGATTGCAAAATTAGGCAAGTTTGTGATCTCGAGGAAGAACACTAGTATGGCATTTCCCACCAAAAAAGACTAGTTTGGAAAGCATGAATTTTGTATAGAATTTTCGTGTGAATCAGTTTTGCTTGGTTCTTGCGGAAAAAGAAAAATCAGGCATTCCATACATGTTGGTGGAAAAGGATGCC]
[+] EMBL AK066617 [ATGGACACGTTGCTCATGCTGCTTAACTGAATCAGGTTCCCTTCCCTCTGCTTGCTTCACGAACTCGCGGAAATCCCGTCCCCTCCCAAAATCTCACCAACGAGTCCACCCCAAATCCATCCACGAATCTCTTCCTCACTCCAACTGCCTCCCTCCGCCGTCAAAATCCAATCTTTCCTCTCACCTCCGCCGCTTTCGGCACGCCCCTTCAACCCCAAGATCGATACTCTCTCCACCAATCCGATCCAATCCGCAGCTGGGTTCCACGAATTGCAAAGGTCTAGGCGCGGATTGGAGCATGGGGCTCCGATCCCCCAACTCGATGCTGTGGCTAGTACTACTGGTGTGGGCGGCGCTGCTGTGCGGTAGCTGCCATGGGAGGTTCGTGGTGGAGAAGAACAGCCTCAAGGTGACGTCGCCCAGCGACATGAAGGGCACCTACGAGTGCGCCATTGGCAACTTCGGCGTGCCCCAGTACGGCGGCACCATGGTCGGCGTCGTCGCCTACCCCAAGGCCAACAAGAAGGCCTGCAAGAGCTTCGACGATTTTGACATCTCCTACAAGGCCAAACCGGGCTCACTCCCCACCTTCCTCCTCGTCGATAGGGGAGATTGCTTTTTCACAAAGAAGGCATGGAATGCACAAAACGCAGGAGCAGCAGCCATCCTTGTTGCTGATGACAAGACTGAACCCCTGATTACAATGGACACGCCTGAAGAGAGTGGAAATACAGACTATTTAGAGAATATCACCATTCCTTCTGCGCTGATAACCAAGAGCTTTGGGGACAAGCTCAAGAAAGCAATTGATAATGGTGACATGGTTAATGTGAATTTGGATTGGAGGGAGTCCCTGCCTCACCCTGATGAGCGTGTTGAGTACGAATTTTGGACTAACAGTAATGATGAGTGTGGCCCTAAATGTGATAGCCAGATTGATTTTGTCAAGAGCTTCAAAGGAGCAGCACAGGTACTTGAGAAGAAGGGATACACACAGTTCACTCCTCATTACATTACCTGGTATTGCCCAGATTCCTTCATTCTAAGCAAGCAGTGCAAGTCCCAGTGTATCAACCATGGGAGATATTGTGCACCTGACCCGGAACAGGATTTCAGCAAAGGGTATGATGGGAAAGATGTGGTAGTCCAGAATTTACGTCAAGTCTGTGTTTATAAAGTTGCTAAGGAGCATGGAAAACCTTGGCTGTGGTGGGACTACGTGACAGATTTTGCAATCCGGTGCCCAATGAAGGAAAAGAAGTACACCAAGGAATGCGCTGATGGAGTTATCAAGTCACTTGGTCTTGATCACAAAGCCATAGATAAGTGCATTGCTGATCCAGATGCTGATAAAGAAAATCCTGTGCTGAAAGCTGAACAGGATGCACAGATTGGCAAGGGCTCTCGTGGTGATGTTACCATCTTACCGACTCTTGTAATCAACAATAGACAATACAGAGGGAAACTTGATAAAGGAGCGGTTCTTAAGGCAATTTGTGCTGGTTTTCGAGAAACCACTGAACCAGCTGTTTGCTTGAGTGAAGATATACAAACAAATGAGTGCTTGGA GAACAATGGTGGCTGTTGGCAAGACAAGGCTGCTAACATCTCTGCATGCAAGGACACTTTTCGT GGAAGAGTTTGTGAATGTCCAGTTGTGAAAGGTGTTAAATTTGTTGGTGATGGCTACACTCACTGTGAAGCTTCGGGATCTGGCCATTGTGAAATTAACAATGGAGGGTGCTGGAAGGATTCCAGGCATGGCCGGACATATTCTGCCTGCACGAATGATGGTTGTAAATGTCCGGATGGGTTCAAAGGTGATGGAGTCCACAAATGCGAAGATATTGATGAATGCAAGGAAAGGACTGCATGCCAGTGCAAGGAATGTAAATGCAAGAACACATGGGGAAGCTATGAGTGCGGTTGCAGTGGCGGCTTGCTTTATATGAAGGAGCATGATACATGCATAAGCAAAAATGCAGCAACAGAGGTAGGATGGAAC TTCTTGTGGGTGATCTTCTTTGGCCTAGTGGTAGCCGGCATTGCAGGATACGCAGTATACAAGTACAGGATCCGGAGGTACATGGATTCAGAGATCCGCGCCATCATGGCCCAGTACATGCCCCTGGACAACCAAGGAGATGTTCCCAATCATTCTCACCATATCGAGCTATGAAAAGAGTGAGGATAGCATGCAACTTCCCCCCATG TTGCCCAAATGGGATGAGAAGAGGTGAACAACTCCTGGAGATCATGACACAGCCTGACGATATGTGTAGTAGTATCACTCTGACGATCTTATGTTTAGCAAATTTAGCCCATGTAAATTTCTGGATTATCCTGTGGCCGCATAATTTCAATCGTACCTGGCTGCTTTGCTCCCATATAGCGCTGGGGAAATATGGAGATTGCAAAATTAGGCAAGTTTGTGATCTCGAGGAAGAACACTAGTATGGCATTTCCCACCAAAAAAGACTAGTTTGGAAAGCATGAATTTTGTATAGAATTTTCGTGTGAATCAGTTTTGCTTG ]
[+] EMBL AK102691 [ AACTCGCGGAAATCCCGTCCCCTCCCAAAATCTCACCAACGAGTCCACCCCAAATCCATCCACGAATCTCTTCCTCACTCCAACTGCCTCCCTCCGCCGTCAAAATCCAATCTTTCCTCTCACCTCCGCCGCTTTCGGCACGCCCCTTCAACCCCAAGATCGATACTCTCTCCACCAATCCGATCCAATCCGCAGCTGGGTTCCACGAATTGCAAAGGTCTAGGCGCGGATTGGAGCATGGGGCTCCGATCCCCCAACTCGATGCTGTGGCTAGTACTACTGGTGTGGGCGGCGCTGCTGTGCGGTAGCTGCCATGGGAGGTTCGTGGTGGAGAAGAACAGCCTCAAGGTGACGTCGCCCAGCGACATGAAGGGCACCTACGAGTGCGCCATTGGCAACTTCGGCGTGCCCCAGTACGGCGGCACCATGGTCGGCGTCGTCGCCTACCCCAAGGCCAACAAGAAGGCCTGCAAGAGCTTCGACGATTTTGACATCTCCTACAAGGCCAAACCGGGCTCACTCCCCACCTTCCTCCTCGTCGATAGGGGAGATTGCTTTTTCACAAAGAAGGCATGGAATGCACAAAACGCAGGAGCAGCAGCCATCCTTGTTGCTGATGACAAGACTGAACCCCTGATTACAATGGACACGCCTGGAGAGAGTGGAAATACAGACTATTTAGAGAATATCACCATTCCTTCTGCGCTGATAACCAAGAGCTTTGGGGACAAGCTCAAGAAAGCAATTGATAATGGTGACATGGTTAATGTGAATTTGGATTGGAGGGAGTCCCTGCCTCACCCTGATGAGCGTGTTGAGTACGAATTTTGGACTAACAGTAATGATGAGTGTGGCCCTAAATGTGATAGCCAGATTGATTTTGTCAAGAGCTTCAAAGGAGCAGCACAGGTACTTGAGAAGAAGGGATACACACAGTTCACTCCTCATTACATTACCTGGTATTGCCCAGATTCCTTCATTCTAAGCAAGCAGTGCAAGTCCCAGTGTATCAACCATGGGAGATATTGTGCACCTGACCCGGAACAGGATTTCAGCAAAGGGTATGATGGGAAAGATGTGGTAGTCCAGAATTTACGTCAAGTCTGTGTTTATAAAGTTGCTAAGGAGCATGGAAAACCTTGGCTGTGGTGGGACTACGTGACAGATTTTGCAATCCGGTGCCCAATGAAGGAAAAGAAGTACACCAAGGAATGCGCTGATGGAGTTATCAAGTCACTTGGTCTTGATCACAAAGCCATAGATAAGTGCATTGCTGATCCAGATGCTGATAAAGAAAATCCTGTGCTGAAAGCTGAACAGGATGCACAGATTGGCAAGGGCTCTCGTGGTGATGTTACCATCTTACCGACTCTTGTAATCAACAATAGACAATACAGAGGGAAACTTGATAAAGGAGCGGTTCTTAAGGCAATTTGTGCTGGTTTTCGAGAAACCACTGAACCAGCTGTTTGCTTGAGTGAAGATATACAAACAAATGAGTGCTTGGA GAACAATGGTGGCTGTTGGCAAGACAAGGCTGCTAACATCTCTGCATGCAAGGACACTTTTCGT GGAAGAGTTTGTGAATGTCCAGTTGTGAAAGGTGTTAAATTTGTTGGTGATGGCTACACTCACTGTGAAGCTTCGGGATCTGGCCATTGTGAAATTAACAATGGAGGGTGCTGGAAGGATTCCAGGCATGGCCGGACATATTCTGCCTGCACGAATGATGGTTGTAAATGTCCGGATGGGTTCAAAGGTGATGGAGTCCACAAATGCGAAGATATTGATGAATGCAAGGAAAGGACTGCATGCCAGTGCAAGGAATGTAAATGCAAGAACACATGGGGAAGCTATGAGTGCGGTTGCAGTGGCGGCTTGCTTTATATGAAGGAGCATGATACATGCATAAGCAAAAATGCAGCAACAGAGGTAGGATGGAAC TTCTTGTGGGTGATCTTCTTTGGCCTAGTGGTAGCCGGCATTGCAGGATACGCAGTATACAAGTACAGGATCCGGAGGTACATGGATTCAGAGATCCGCGCCATCATGGCCCAGTACATGCCCCTGGACAACCAAGGAGATGTTCCCAATCATTCTCACCATATCGAGCTATGAAAAGAGTGAGGATAGCATGCAACTTCCCCCCATG TTGCCCAAATGGGATGAGAAGAGGTGAACAACTCCTGGAGATCATGACACAGCCTGACGATATGTGTAGTAGTATCACTCTGACGATCTTATGTTTAGCAAATTTAGCCCATGTAAATTTCTGGATTATCCTGTGGCCGCATAATTTCAATCGTACCTGGCTGCTTTGCTCCCATATAGCGCTGGGGAAATATGGAGATTGCAAAATTAGGCAAGTTTGTGATCTCGAGGAAGAACACTAGTATGGCATTTCCCACCAAAAAAGACTAGTTTGGAAAGCATGAATTTTGTATAGAATTTTCGTGTGAATCAGTTTTGCTTGGTTCTTGCGGAAAAAGAAAAATCAGGCATTCCATACATGTTGGTGGAAAAGGATGCC]
[+] EMBL C72582 [ GAGATATTGTGCACCTGACCCGGAACAGGATTTCAGCAAAGGGTATGATGGGAAAGATGTGGTAGTCCAGAATTTACGTCAAGTCTGTGTTTATAAAGTTGCTAAGGAGCATGGAAAACCTTGGCTGTGGTGGGACTACGTGACAGATTTTGCAATCCGGTGCCCAATGAAGGAAAAGAAGTACACCAAGGAATGCGCTGATGGAGTTATCAAGTCACTTGGTCTTGATCACAAAGCCATAGATAAGTGCATTGGTGATCCAGATGCTGATAAAGAAAATCCTGTGCTGAAANCTGAACAGGATGCACAGATTGGCAAGGGCTCTCGTGGTGATGTTACCATCTTACCGACTCTTGTAATCAACAATAGACAATACAGNGGGAAACTTGATAAAGGAGCGGTTCTTAAGGCAATTTGTGCTGG TTTCG GGAACCNCTG ACCA ]
[+] EMBL OSS2913A [ ATAGATAAGTGCATTGGTGATCCAGATGCTGATAAAGAAAATCCTGTGCTGAAAG TGAACAGGATGCACAGATTGGCAAGGGCTCTCGTGGTGATGTTACCATCTTACCGACTCTTGTAATCAACAATAGACAATACAGAGGGAAACTTGATAAAGGAGCGGTTCTTAAGGCAATTTGTGCTGGTTTTCGAGAAACCACTGAACCAGCTGTTTGCTTGAGTGAAGATATACAAACAAATGAGTGCTTGGAGGAACAATGGTGGCTGTTGGCAAGACAAGGCTGCTAACATCTCTGCATGCAAGGACACTTTTCGT GGGAGA ]
[+] EMBL OSS3579A [ ATAGATAAGTGCATTGGTGATCCAGATGCTGATAAAGAAAATCCTGTGCTGAAAG TGAACAGGATGCACAGATTGGCAAGGGCTCTCGTGGTGATGTTACCATCTTACCGACTCTTGTAATCAACAATAGACAATACAGAGGGAAACTTGATAAAGGAGCGGTTCTTAAGGCAATTTGTGCTGGTTTTCGAGAAACCACTGAACCAGCTGTTTGCTTGAGTGAAGATATACAANCAAATGAGTGCTTGGA GAACAATGGTGGCTGTTGGCAAGACAAGGCTGCTAACATCTCTGCATGCAAGGACACTTTTCGTGGGAAGAGTTTGTGAATGTCCAGTTGTAAAAGGTGTTAAATTTGTTGGTGATGGCTACACTCACTGTGAAGCTTCGGGATCTGGC ]
[+] EMBL OSS3185A [ ATAGATAAGTGCATTGGTGATCCAGATGCTGATAAAGAAAATCCTGTGCTGAAAGCTGAACAGGATGCACAGATTGGCAAGGGCTCTCGTGGTGATGTTACCATCTTACCGACTCTTGTAATCAACAATAGACAATACAGAGGGAAACTTGATAAAGGAGCGGTTCTTAAGGCAATTTGTGCTGGTTTTCGAGAAACCACTGAACCAGCTGTTTGCTTGAGTGAAGATATACAAACAAATGAGTGCTTGGA GAACAATGGTGGCTGTTGGCAAGACAAGGCTGCTAACATCTCTGCATGCAAGGACA ]
[+] EMBL C28755 [ TGTCCGGATGGGTTCAAAGGTGATGGAGTCCACAAATGCGAAGATATTGATGAATGCAAGGAAAGGACTGCATGCCAGTNCAAGGAATGTAAATGCAAGAACACATGGGGAAGCTATGAGTGCGGTTGCAGTGGCGGCTTGCTTTATATGAAGGAGCATGATACATGCATAAGCAAAAATGCAGCAACAGAGGTAGGATGGAAC TTCTTGTGGGTGATCTTCTTTGGCCTAGTGGTAGCCGGCATTGCAGGATACGCAGTATACAAGTACAGGATCCGGAGGTACATGGATTCAGAGATCCGCGCCATCATGGCCCAGTACATGCCCCTGGACAACCAAGGAGATGTTCCCAATCATTCTCACCATATCGNGCTATGAAAAGAGTTAGGATAGCATGCAACTTNCCCCCATGTTTNCCCAATTGGGTTNAGA ]
[+] EMBL AA751345 [ ACTGCATGCCAGT CAAGGAATGCAAATGCAAGAACACATGGGGAAGCTATGAATGCGGTTGCAGTGGCGGCTTGC TTATAT AAGGAGCATGATAC TGCATAA CAAAAATGCAGCAACAGAGGTAGGATGGAAC TT TTGTGGGTGATCTTCTTTGGCCTAGTGGTAGCAGGCATTCGAGGATAC C GTAT ]
[+] EMBL AA752230 [ CCAGTGCAAGGAATGCAAATGCAAGAACACATGGGGAAGCTATGAATGCGGTTGCAGTGGCGGCTTGCTTTATATGAAGGAGCATGATACATGCATAAGCAAAAATGCAGCAACAGAGGTAGGATGGAACGTTCTTGTGGGTGATCTTCTTTGGCCTAGTGGTAGCAGGCAT ]
consensusID : consensus_14119#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 683 fasta sequence
[GGGGTCCAAAAGGANTTTNNGAANCNGGGAGGGNTCCCCCTNCCAGGNATCAATCCCAGAANANNGGGANTTTGAANGGNNCCAGGGGGGTTCTTTNTTGGAGGGGCNGAAACNNAAAACCAAAAGGCNCAAACNGNGTTGGGGGGAACTTNTGGGGGANATTTTTTTGGCCCNAGTGGTAACCAGGCATTGCAGGGAAACCCAGTAAACAAAAACAGAATCGGGAGGAACATGGATTCAGAGATCCGCGCCNTCATGGCCCAGAACATGCCCCTTGGACAACCAAGGAGATGTTCCCAATCATTCTCACCATATCGAGCTATGAAAAGAGGGAGGAAAACATGCAACTTCCCCCCATGTTGCTCAAATGGGATGAGAAGAGGTGAAAAACTGGAGATCATGAGCTGCAAATGAACACACAGCCTGACGATATGTGTGGTAGTATCACTCTGAGGATCTTATGTTTAGCAAATTTAGCCCATTGTAAATTTTTGGATTATCCTGTGGCCGCATAGTTTCAAATCGTACCTGGCTGCTTTGCTCCCATATAGCGCTGGGGAAATATGGAGATTGCAAAATTAGGCAAGTTTGTGATNTCGAGGAAGAACNCAAGTATGGCATTCCCCNCCCAAAAAGACCTGTTTGGAAAGCATGAATTTTGTATAGAAAAAAAAAAAAAAAAA]
[+] EMBL AA753860 [GGGGTCCAAAAGGANTTTNNGAANCNGGGAGGGNTCCCCCTNCCAGGNATCAATCCCAGAANANNGGGANTTTGAANGGNNCCAGGGGGGTTCTTTNTTGGAGGGGCNGAAACNNAAAACCAAAAGGCNCAAACNGNGTTGGGGGGAACTTNTGGGGGANATTTTTTTGGCCCNAGTGGTAACCAGGCATTGCAGGGAAACCCAGTAAACAAAAACAGAATCGGGAGGAACATGGATTCAGAGATCCGCGCCNTCATGGCCCAGAACATGCCCCTTGGACAACCAAGGAGATGTTCCCAATCATTCTCACCATATCGAGCTATGAAAAGAGGGAGGAAAACATGCAACTTCCCCCCATGTTGCTCAAATGGGATGAGAAGAGGTGAAAAACTGGAGATCATGAGCTGCAAATGAACACACAGCCTGACGATATGTGTGGTAGTATCACTCTGAGGATCTTATGTTTAGCAAATTTAGCCCATTGTAAATTTCTGGATTATCCTGTGGCCGCATAGTTTCAAATCGTACCTGGCTGCTTTGCTCCCATATAGCGCTGGGGAAATATGGAGATTGCAAAATTAGGCA ]
[+] EMBL AU174272 [ TATGTTTAGCAAATTTAGCCCATTGTAAATTTTTGGATTATCCTGTGGCCGCATAGTTTCAAATCGTACCTGGCTGCTTTGCTCCCATATAGCGCTGGGGAAATATGGAGATTGCAAAATTAGGCAAGTTTGTGATNTCGAGGAAGAACNCAAGTATGGCATTCCCCNCCCAAAAAGACCTGTTTGGAAAGCATGAATTTTGTATAGAAAAAAAAAAAAAAAAA]
[+] EMBL AU223065 [ TATGTTTAGCAAATTTAGCCCNTTGTAAATTTTTGGATTATCCTGTGGCCGCATAGTTTCAAATCGTACCTGGCTGCTTTGCTCCCATATAGCGCTGGGGAAATATGGAGATTGCAAAATTAGGCAAGTTTGTGATNTCGAGGAAGAACNCAAGTATGGCATTCCCCNCCCAAAAAGACCTGTTTGGAAAGCATGAATTTTGTATAGAAAAAAAAAAAAAAAAA]
[+] EMBL AU223083 [ TATGTTTAGCAAATTTAGCCCNTTGTAAATTTTTGGATTATCCTGTGGCCGCATAGTTTCAAATCGTACCTGGCTGCTTTGCTCCCATATAGCGCTGGGGAAATATGGAGATTGCAAAATTAGGCAAGTTTGTGATNTNGAGGAAGAACNCAAGTATGGCATTCCCCNCCCAAAAANACCTGTTTGGAAAGCATGAATTTTGTNTTGNAAAAAAAAAAAAAAAA]
consensusID : consensus_14119#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 514 fasta sequence
[AGGATCCGNAGGTNCATGGATTTCAGAGATCCGCGCCATCATGGCCCCAGTACATGCCCCTGGACAACCAAGGAGATGTTCCCAATCATTCTCACCATATCGAGCTATGAAAAGAGGGAGGAAAACATGCAACTTCCCCCCATGTTGCTCAAATGGGATGAGAAGAGGTGAAAAACTGGAGATCATGAGCTGCAAATGAACACACAGCCTGACGATATGTGTGGTAGTATCACTCTGAGGATCTTATGTTTAGCAAATTTAGCCCATTGTAAATTTCTGGATTATCCTGTGGCCGCATAGTTTCAAATCGTACCTGGCTGCTTTGCTCCCATATAGCGCTGGGGAAATATGGAGATTGCAAAATTAGGCAAGTTTGTGATCTCGAGGAAGAACACAAGTATGGCATTCCCCACCNAAAAAGACCTGTTTGGAAAGCATGAATTTTGTATAGAATTTTCGTGTGAATCAGTTTTGCTTGGTTCTTGCGGAAAAAGAAAAAAAAAAAAAAAAAAAA]
[+] EMBL C96886 [AGGATCCGNAGGTNCATGGATTTCAGAGATCCGCGCCATCATGGCCCCAGTACATGCCCCTGGACAACCAAGGAGATGTTCCCAATCATTCTCACCATATCGAGCTATGAAAAGAGGGAGGAAAACATGCAACTTCCCCCCATGTTGCTCAAATGGGATGAGAAGAGGTGAAAAACTGGAGATCATGAGCTGCAAATGAACACACAGCCTGACGATATGTGTGGTAGTATCACTCTGAGGATCTTATGTTTAGCAAATTTAGCCCATTGTAAATTTCTGGATTATCCTGTGGCCGCATAGTTTCAAATCGTACCTGGCTGCTTTGCTCCCATATAGCGCTGGGGAAATATGGAGATTGCAAAATTAGGCAAGTTTGTGATCTCGAGGAAGAACACAAGTATGGCATTCCCCACCNAAAAAGACCTGTTTGGAAAGCATGAATTTTGTATAGAATTTTCGTGTGAATCAGTTTTGCTTGGTTCTTGCGGAAAAAGAAAAAAAAAAAAAAAAAAAA]
consensusID : consensus_14119#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 345 fasta sequence
[CCGCCGTCAAAATCCAATCTTTCCTCTCCACTCCGCCGNTTTCGGCACGCCCTTTCAACCCCAAGATCGNTCCTACCNCCNACCAATCCGATCCAATCCGCAGCTGGGTTCCACGAATTGCAAAGGTCTAGGTGTGGATTNGAGCATGGAGCTCCNATCCNCCAACTTGATGATGTGGTTAGCACTACTGGTGTGGGNCGCGCTGCTGTGCGGTANTTGNCATGGGAGGTTCGTGGTGGAGAAGAACAGCCTCAAGGTGACGTCGCCCAGCGACATGGAAGGGCACCTACGAGTGCGCCATTGNCAACTTCGGNGTGCCCCAGTACGGNGGCACCATGGTCGGCG]
[+] EMBL C26775 [CCGCCGTCAAAATCCAATCTTTCCTCTCCACTCCGCCGNTTTCGGCACGCCCTTTCAACCCCAAGATCGNTCCTACCNCCNACCAATCCGATCCAATCCGCAGCTGGGTTCCACGAATTGCAAAGGTCTAGGTGTGGATTNGAGCATGGAGCTCCNATCCNCCAACTTGATGATGTGGTTAGCACTACTGGTGTGGGNCGCGCTGCTGTGCGGTANTTGNCATGGGAGGTTCGTGGTGGAGAAGAACAGCCTCAAGGTGACGTCGCCCAGCGACATGGAAGGGCACCTACGAGTGCGCCATTGNCAACTTCGGNGTGCCCCAGTACGGNGGCACCATGGTCGGCG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_14119#0 ------------------------------------------------------------
consensus_14119#3 ------------------------------------------------------------
consensus_14119#1 GGGGTCCAAAAGGANTTTNNGAANCNGGGAGGGNTCCCCCTNCCAGGNATCAATCCCAGA 60
consensus_14119#2 ------------------------------------------------------------
consensus_14119#0 ----------------------------------ATGGACACGTTGCTCATGCTGCTTAA 26
consensus_14119#3 ------------------------------------------------------------
consensus_14119#1 ANANNGGGANTTTGAANGGNNCCAGGGGGGTTCTTTNTTGGAGGGGCNGAAACNNAAAAC 120
consensus_14119#2 ------------------------------------------------------------
consensus_14119#0 CTGAATCAGGTTCCCTTCCCTCTGCTTGCTTCACGAACTCGCGGAAATCCCGTCCCCTCC 86
consensus_14119#3 ------------------------------------------------------------
consensus_14119#1 CAAAAGGCNCAAACNGNGTTGGGGGGAACTTNTGGGGGANATTTTTTTGGCCCNAGTGGT 180
consensus_14119#2 ------------------------------------------------------------
consensus_14119#0 CAAAATCTCACCAACGAGTCCACCCCAAATCCATCCACGAATCTCTTCCTCACTCCAACT 146
consensus_14119#3 ------------------------------------------------------------
consensus_14119#1 AACCAGGCATTGCAGGGAAACCCAGTAAACAAAAACAGAATCGGGAGGAACATGGATT-C 239
consensus_14119#2 ------------------------------------AGGATCCGNAGGTNCATGGATTTC 24
consensus_14119#0 GCCTCCCTCCGCCGTCAAAATCC--AATCTTTCCTCT----CACCTCCGCCGCTTTCGGC 200
consensus_14119#3 --------CCGCCGTCAAAATCC--AATCTTTCCTCT----CCACTCCGCCGNTTTCGGC 46
consensus_14119#1 AGAGATCCGCGCCNTCATGGCCC-AGAACATGCCCCTTGGACAACCAAGGAGATGTTCCC 298
consensus_14119#2 AGAGATCCGCGCCATCATGGCCCCAGTACATGCCCCT-GGACAACCAAGGAGATGTTCCC 83
**** *** ** * * ** ** * * * * * * *
consensus_14119#0 ACGCCCCTTCAACCCCAAGATCGATACT-CTCTCCACCAATCCGATCCAATCCGCAGCTG 259
consensus_14119#3 ACGCCCTTTCAACCCCAAGATCGNTCCTACCNCCNACCAATCCGATCCAATCCGCAGCTG 106
consensus_14119#1 AATCATTCTCACCATATCGAGCTATGAAAAGAGGGAGGAAAAC-ATGCAACTTCCCCCCA 357
consensus_14119#2 AATCATTCTCACCATATCGAGCTATGAAAAGAGGGAGGAAAAC-ATGCAACTTCCCCCCA 142
* * *** * ** * * * ** * ** *** * *
consensus_14119#0 GGTTCCACGAATTGCAAAGGTCTAGGCGCGGATTGGAGCATG--GGGCTCC----GATCC 313
consensus_14119#3 GGTTCCACGAATTGCAAAGGTCTAGGTGTGGATTNGAGCATG--GAGCTCC----NATCC 160
consensus_14119#1 TGTTGCTCAAATGGGATGAGAAGAGGTGAAAAACTGGAGATCATGAGCTGCAAATGAACA 417
consensus_14119#2 TGTTGCTCAAATGGGATGAGAAGAGGTGAAAAACTGGAGATCATGAGCTGCAAATGAACA 202
*** * * *** * * * *** * * * ** * *** * * *
consensus_14119#0 CCCAACTCGATGCTGTGGCTAGTACTACTGGTGTGGGCGGCGC-TGCTGTGCGGTAGCTG 372
consensus_14119#3 NCCAACTTGATGATGTGGTTAGCACTACTGGTGTGGGNCGCGC-TGCTGTGCGGTANTTG 219
consensus_14119#1 CACAGCCTGACGATATGTGTGGTAGTATCACTCTGAGGATCTTATGTTTAGCAAATTTAG 477
consensus_14119#2 CACAGCCTGACGATATGTGTGGTAGTATCACTCTGAGGATCTTATGTTTAGCAAATTTAG 262
** * ** * * ** * * * ** * ** * * ** * ** *
consensus_14119#0 CC-ATGGGAGGTTCGTGG-------TGGAGAAGAACAGCCTCAA---------GGTGACG 415
consensus_14119#3 NC-ATGGGAGGTTCGTGG-------TGGAGAAGAACAGCCTCAA---------GGTGACG 262
consensus_14119#1 CCCATTGTAAATTTTTGGATTATCCTGTGGCCGCATAGTTTCAAATCGTACCTGGCTGCT 537
consensus_14119#2 CCCATTGTAAATTTCTGGATTATCCTGTGGCCGCATAGTTTCAAATCGTACCTGGCTGCT 322
* ** * * ** *** ** * * * ** **** ** *
consensus_14119#0 TCGCCCAGCGACATG-AAGGGCACCTACGAG---TGCGCCATT-GGCAACTTCGGCGTGC 470
consensus_14119#3 TCGCCCAGCGACATGGAAGGGCACCTACGAG---TGCGCCATT-GNCAACTTCGGNGTGC 318
consensus_14119#1 TTGCTCCCATATAGCGCTGGGGAAATATGGAGATTGCAAAATTAGGCAAGTTTGTGATNT 597
consensus_14119#2 TTGCTCCCATATAGCGCTGGGGAAATATGGAGATTGCAAAATTAGGCAAGTTTGTGATCT 382
* ** * * * *** * ** * *** *** * *** ** * *
consensus_14119#0 CCCAGTACGGCGGCACCATGGTCGGCGTCGTCGCCTACCCCAAGGCCAACAAGAAGGCCT 530
consensus_14119#3 CCCAGTACGGNGGCACCATGGTCGGCG--------------------------------- 345
consensus_14119#1 CGAGGAAGAACNCAAGTATGGCATTCCCCNCCCAAAAAGACCTGTTTGGAAAGCATGAAT 657
consensus_14119#2 CGAGGAAGAACACAAGTATGGCATTCCCCACCNAAAAAGACCTGTTTGGAAAGCATGAAT 442
* * * * **** *
consensus_14119#0 GCAAGAGCTTCGACGATTTTGACATCTCCTACAAGGCCAAACCGGGCTCACTCCCCACCT 590
consensus_14119#3 ------------------------------------------------------------
consensus_14119#1 TTTGTATAGAAAAAAAAAAAAAAAAA---------------------------------- 683
consensus_14119#2 TTTGTATAGAATTTTCGTGTGAATCAGTTTTGCTTGGTTCTTGCGGAAAAAGAAAAAAAA 502
consensus_14119#0 TCCTCCTCGTCGATAGGGGAGATTGCTTTTTCACAAAGAAGGCATGGAATGCACAAAACG 650
consensus_14119#3 ------------------------------------------------------------
consensus_14119#1 ------------------------------------------------------------
consensus_14119#2 AAAAAAAAAAAA------------------------------------------------ 514
consensus_14119#0 CAGGAGCAGCAGCCATCCTTGTTGCTGATGACAAGACTGAACCCCTGATTACAATGGACA 710
consensus_14119#3 ------------------------------------------------------------
consensus_14119#1 ------------------------------------------------------------
consensus_14119#2 ------------------------------------------------------------
consensus_14119#0 CGCCTGAAGAGAGTGGAAATACAGACTATTTAGAGAATATCACCATTCCTTCTGCGCTGA 770
consensus_14119#3 ------------------------------------------------------------
consensus_14119#1 ------------------------------------------------------------
consensus_14119#2 ------------------------------------------------------------
consensus_14119#0 TAACCAAGAGCTTTGGGGACAAGCTCAAGAAAGCAATTGATAATGGTGACATGGTTAATG 830
consensus_14119#3 ------------------------------------------------------------
consensus_14119#1 ------------------------------------------------------------
consensus_14119#2 ------------------------------------------------------------
consensus_14119#0 TGAATTTGGATTGGAGGGAGTCCCTGCCTCACCCTGATGAGCGTGTTGAGTACGAATTTT 890
consensus_14119#3 ------------------------------------------------------------
consensus_14119#1 ------------------------------------------------------------
consensus_14119#2 ------------------------------------------------------------
consensus_14119#0 GGACTAACAGTAATGATGAGTGTGGCCCTAAATGTGATAGCCAGATTGATTTTGTCAAGA 950
consensus_14119#3 ------------------------------------------------------------
consensus_14119#1 ------------------------------------------------------------
consensus_14119#2 ------------------------------------------------------------
consensus_14119#0 GCTTCAAAGGAGCAGCACAGGTACTTGAGAAGAAGGGATACACACAGTTCACTCCTCATT 1010
consensus_14119#3 ------------------------------------------------------------
consensus_14119#1 ------------------------------------------------------------
consensus_14119#2 ------------------------------------------------------------
consensus_14119#0 ACATTACCTGGTATTGCCCAGATTCCTTCATTCTAAGCAAGCAGTGCAAGTCCCAGTGTA 1070
consensus_14119#3 ------------------------------------------------------------
consensus_14119#1 ------------------------------------------------------------
consensus_14119#2 ------------------------------------------------------------
consensus_14119#0 TCAACCATGGGAGATATTGTGCACCTGACCCGGAACAGGATTTCAGCAAAGGGTATGATG 1130
consensus_14119#3 ------------------------------------------------------------
consensus_14119#1 ------------------------------------------------------------
consensus_14119#2 ------------------------------------------------------------
consensus_14119#0 GGAAAGATGTGGTAGTCCAGAATTTACGTCAAGTCTGTGTTTATAAAGTTGCTAAGGAGC 1190
consensus_14119#3 ------------------------------------------------------------
consensus_14119#1 ------------------------------------------------------------
consensus_14119#2 ------------------------------------------------------------
consensus_14119#0 ATGGAAAACCTTGGCTGTGGTGGGACTACGTGACAGATTTTGCAATCCGGTGCCCAATGA 1250
consensus_14119#3 ------------------------------------------------------------
consensus_14119#1 ------------------------------------------------------------
consensus_14119#2 ------------------------------------------------------------
consensus_14119#0 AGGAAAAGAAGTACACCAAGGAATGCGCTGATGGAGTTATCAAGTCACTTGGTCTTGATC 1310
consensus_14119#3 ------------------------------------------------------------
consensus_14119#1 ------------------------------------------------------------
consensus_14119#2 ------------------------------------------------------------
consensus_14119#0 ACAAAGCCATAGATAAGTGCATTGGTGATCCAGATGCTGATAAAGAAAATCCTGTGCTGA 1370
consensus_14119#3 ------------------------------------------------------------
consensus_14119#1 ------------------------------------------------------------
consensus_14119#2 ------------------------------------------------------------
consensus_14119#0 AAGCTGAACAGGATGCACAGATTGGCAAGGGCTCTCGTGGTGATGTTACCATCTTACCGA 1430
consensus_14119#3 ------------------------------------------------------------
consensus_14119#1 ------------------------------------------------------------
consensus_14119#2 ------------------------------------------------------------
consensus_14119#0 CTCTTGTAATCAACAATAGACAATACAGAGGGAAACTTGATAAAGGAGCGGTTCTTAAGG 1490
consensus_14119#3 ------------------------------------------------------------
consensus_14119#1 ------------------------------------------------------------
consensus_14119#2 ------------------------------------------------------------
consensus_14119#0 CAATTTGTGCTGGTTTTCGAGAAACCACTGAACCAGCTGTTTGCTTGAGTGAAGATATAC 1550
consensus_14119#3 ------------------------------------------------------------
consensus_14119#1 ------------------------------------------------------------
consensus_14119#2 ------------------------------------------------------------
consensus_14119#0 AAACAAATGAGTGCTTGGAGAACAATGGTGGCTGTTGGCAAGACAAGGCTGCTAACATCT 1610
consensus_14119#3 ------------------------------------------------------------
consensus_14119#1 ------------------------------------------------------------
consensus_14119#2 ------------------------------------------------------------
consensus_14119#0 CTGCATGCAAGGACACTTTTCGTGGAAGAGTTTGTGAATGTCCAGTTGTGAAAGGTGTTA 1670
consensus_14119#3 ------------------------------------------------------------
consensus_14119#1 ------------------------------------------------------------
consensus_14119#2 ------------------------------------------------------------
consensus_14119#0 AATTTGTTGGTGATGGCTACACTCACTGTGAAGCTTCGGGATCTGGCCATTGTGAAATTA 1730
consensus_14119#3 ------------------------------------------------------------
consensus_14119#1 ------------------------------------------------------------
consensus_14119#2 ------------------------------------------------------------
consensus_14119#0 ACAATGGAGGGTGCTGGAAGGATTCCAGGCATGGCCGGACATATTCTGCCTGCACGAATG 1790
consensus_14119#3 ------------------------------------------------------------
consensus_14119#1 ------------------------------------------------------------
consensus_14119#2 ------------------------------------------------------------
consensus_14119#0 ATGGTTGTAAATGTCCGGATGGGTTCAAAGGTGATGGAGTCCACAAATGCGAAGATATTG 1850
consensus_14119#3 ------------------------------------------------------------
consensus_14119#1 ------------------------------------------------------------
consensus_14119#2 ------------------------------------------------------------
consensus_14119#0 ATGAATGCAAGGAAAGGACTGCATGCCAGTGCAAGGAATGTAAATGCAAGAACACATGGG 1910
consensus_14119#3 ------------------------------------------------------------
consensus_14119#1 ------------------------------------------------------------
consensus_14119#2 ------------------------------------------------------------
consensus_14119#0 GAAGCTATGAGTGCGGTTGCAGTGGCGGCTTGCTTTATATGAAGGAGCATGATACATGCA 1970
consensus_14119#3 ------------------------------------------------------------
consensus_14119#1 ------------------------------------------------------------
consensus_14119#2 ------------------------------------------------------------
consensus_14119#0 TAAGCAAAAATGCAGCAACAGAGGTAGGATGGAACTTCTTGTGGGTGATCTTCTTTGGCC 2030
consensus_14119#3 ------------------------------------------------------------
consensus_14119#1 ------------------------------------------------------------
consensus_14119#2 ------------------------------------------------------------
consensus_14119#0 TAGTGGTAGCCGGCATTGCAGGATACGCAGTATACAAGTACAGGATCCGGAGGTACATGG 2090
consensus_14119#3 ------------------------------------------------------------
consensus_14119#1 ------------------------------------------------------------
consensus_14119#2 ------------------------------------------------------------
consensus_14119#0 ATTCAGAGATCCGCGCCATCATGGCCCAGTACATGCCCCTGGACAACCAAGGAGATGTTC 2150
consensus_14119#3 ------------------------------------------------------------
consensus_14119#1 ------------------------------------------------------------
consensus_14119#2 ------------------------------------------------------------
consensus_14119#0 CCAATCATTCTCACCATATCGAGCTATGAAAAGAGTGAGGATAGCATGCAACTTCCCCCC 2210
consensus_14119#3 ------------------------------------------------------------
consensus_14119#1 ------------------------------------------------------------
consensus_14119#2 ------------------------------------------------------------
consensus_14119#0 ATGTTGCCCAAATGGGATGAGAAGAGGTGAACAACTCCTGGAGATCATGACACAGCCTGA 2270
consensus_14119#3 ------------------------------------------------------------
consensus_14119#1 ------------------------------------------------------------
consensus_14119#2 ------------------------------------------------------------
consensus_14119#0 CGATATGTGTAGTAGTATCACTCTGACGATCTTATGTTTAGCAAATTTAGCCCATGTAAA 2330
consensus_14119#3 ------------------------------------------------------------
consensus_14119#1 ------------------------------------------------------------
consensus_14119#2 ------------------------------------------------------------
consensus_14119#0 TTTCTGGATTATCCTGTGGCCGCATAATTTCAATCGTACCTGGCTGCTTTGCTCCCATAT 2390
consensus_14119#3 ------------------------------------------------------------
consensus_14119#1 ------------------------------------------------------------
consensus_14119#2 ------------------------------------------------------------
consensus_14119#0 AGCGCTGGGGAAATATGGAGATTGCAAAATTAGGCAAGTTTGTGATCTCGAGGAAGAACA 2450
consensus_14119#3 ------------------------------------------------------------
consensus_14119#1 ------------------------------------------------------------
consensus_14119#2 ------------------------------------------------------------
consensus_14119#0 CTAGTATGGCATTTCCCACCAAAAAAGACTAGTTTGGAAAGCATGAATTTTGTATAGAAT 2510
consensus_14119#3 ------------------------------------------------------------
consensus_14119#1 ------------------------------------------------------------
consensus_14119#2 ------------------------------------------------------------
consensus_14119#0 TTTCGTGTGAATCAGTTTTGCTTGGTTCTTGCGGAAAAAGAAAAATCAGGCATTCCATAC 2570
consensus_14119#3 ------------------------------------------------------------
consensus_14119#1 ------------------------------------------------------------
consensus_14119#2 ------------------------------------------------------------
consensus_14119#0 ATGTTGGTGGAAAAGGATGCC 2591
consensus_14119#3 ---------------------
consensus_14119#1 ---------------------
consensus_14119#2 ---------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||