These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14119#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 2591 fasta sequence [ATGGACACGTTGCTCATGCTGCTTAACTGAATCAGGTTCCCTTCCCTCTGCTTGCTTCACGAACTCGCGGAAATCCCGTCCCCTCCCAAAATCTCACCAACGAGTCCACCCCAAATCCATCCACGAATCTCTTCCTCACTCCAACTGCCTCCCTCCGCCGTCAAAATCCAATCTTTCCTCTCACCTCCGCCGCTTTCGGCACGCCCCTTCAACCCCAAGATCGATACTCTCTCCACCAATCCGATCCAATCCGCAGCTGGGTTCCACGAATTGCAAAGGTCTAGGCGCGGATTGGAGCATGGGGCTCCGATCCCCCAACTCGATGCTGTGGCTAGTACTACTGGTGTGGGCGGCGCTGCTGTGCGGTAGCTGCCATGGGAGGTTCGTGGTGGAGAAGAACAGCCTCAAGGTGACGTCGCCCAGCGACATGAAGGGCACCTACGAGTGCGCCATTGGCAACTTCGGCGTGCCCCAGTACGGCGGCACCATGGTCGGCGTCGTCGCCTACCCCAAGGCCAACAAGAAGGCCTGCAAGAGCTTCGACGATTTTGACATCTCCTACAAGGCCAAACCGGGCTCACTCCCCACCTTCCTCCTCGTCGATAGGGGAGATTGCTTTTTCACAAAGAAGGCATGGAATGCACAAAACGCAGGAGCAGCAGCCATCCTTGTTGCTGATGACAAGACTGAACCCCTGATTACAATGGACACGCCTGAAGAGAGTGGAAATACAGACTATTTAGAGAATATCACCATTCCTTCTGCGCTGATAACCAAGAGCTTTGGGGACAAGCTCAAGAAAGCAATTGATAATGGTGACATGGTTAATGTGAATTTGGATTGGAGGGAGTCCCTGCCTCACCCTGATGAGCGTGTTGAGTACGAATTTTGGACTAACAGTAATGATGAGTGTGGCCCTAAATGTGATAGCCAGATTGATTTTGTCAAGAGCTTCAAAGGAGCAGCACAGGTACTTGAGAAGAAGGGATACACACAGTTCACTCCTCATTACATTACCTGGTATTGCCCAGATTCCTTCATTCTAAGCAAGCAGTGCAAGTCCCAGTGTATCAACCATGGGAGATATTGTGCACCTGACCCGGAACAGGATTTCAGCAAAGGGTATGATGGGAAAGATGTGGTAGTCCAGAATTTACGTCAAGTCTGTGTTTATAAAGTTGCTAAGGAGCATGGAAAACCTTGGCTGTGGTGGGACTACGTGACAGATTTTGCAATCCGGTGCCCAATGAAGGAAAAGAAGTACACCAAGGAATGCGCTGATGGAGTTATCAAGTCACTTGGTCTTGATCACAAAGCCATAGATAAGTGCATTGGTGATCCAGATGCTGATAAAGAAAATCCTGTGCTGAAAGCTGAACAGGATGCACAGATTGGCAAGGGCTCTCGTGGTGATGTTACCATCTTACCGACTCTTGTAATCAACAATAGACAATACAGAGGGAAACTTGATAAAGGAGCGGTTCTTAAGGCAATTTGTGCTGGTTTTCGAGAAACCACTGAACCAGCTGTTTGCTTGAGTGAAGATATACAAACAAATGAGTGCTTGGA-GAACAATGGTGGCTGTTGGCAAGACAAGGCTGCTAACATCTCTGCATGCAAGGACACTTTTCGT-GGAAGAGTTTGTGAATGTCCAGTTGTGAAAGGTGTTAAATTTGTTGGTGATGGCTACACTCACTGTGAAGCTTCGGGATCTGGCCATTGTGAAATTAACAATGGAGGGTGCTGGAAGGATTCCAGGCATGGCCGGACATATTCTGCCTGCACGAATGATGGTTGTAAATGTCCGGATGGGTTCAAAGGTGATGGAGTCCACAAATGCGAAGATATTGATGAATGCAAGGAAAGGACTGCATGCCAGTGCAAGGAATGTAAATGCAAGAACACATGGGGAAGCTATGAGTGCGGTTGCAGTGGCGGCTTGCTTTATATGAAGGAGCATGATACATGCATAAGCAAAAATGCAGCAACAGAGGTAGGATGGAAC-TTCTTGTGGGTGATCTTCTTTGGCCTAGTGGTAGCCGGCATTGCAGGATACGCAGTATACAAGTACAGGATCCGGAGGTACATGGATTCAGAGATCCGCGCCATCATGGCCCAGTACATGCCCCTGGACAACCAAGGAGATGTTCCCAATCATTCTCACCATATCGAGCTATGAAAAGAGTGAGGATAGCATGCAACTTCCCCCCATG-TTGCCCAAATGGGATGAGAAGAGGTGAACAACTCCTGGAGATCATGACACAGCCTGACGATATGTGTAGTAGTATCACTCTGACGATCTTATGTTTAGCAAATTTAGCCCATGTAAATTTCTGGATTATCCTGTGGCCGCATAATTTCAATCGTACCTGGCTGCTTTGCTCCCATATAGCGCTGGGGAAATATGGAGATTGCAAAATTAGGCAAGTTTGTGATCTCGAGGAAGAACACTAGTATGGCATTTCCCACCAAAAAAGACTAGTTTGGAAAGCATGAATTTTGTATAGAATTTTCGTGTGAATCAGTTTTGCTTGGTTCTTGCGGAAAAAGAAAAATCAGGCATTCCATACATGTTGGTGGAAAAGGATGCC] [+] EMBL AK066617 [ATGGACACGTTGCTCATGCTGCTTAACTGAATCAGGTTCCCTTCCCTCTGCTTGCTTCACGAACTCGCGGAAATCCCGTCCCCTCCCAAAATCTCACCAACGAGTCCACCCCAAATCCATCCACGAATCTCTTCCTCACTCCAACTGCCTCCCTCCGCCGTCAAAATCCAATCTTTCCTCTCACCTCCGCCGCTTTCGGCACGCCCCTTCAACCCCAAGATCGATACTCTCTCCACCAATCCGATCCAATCCGCAGCTGGGTTCCACGAATTGCAAAGGTCTAGGCGCGGATTGGAGCATGGGGCTCCGATCCCCCAACTCGATGCTGTGGCTAGTACTACTGGTGTGGGCGGCGCTGCTGTGCGGTAGCTGCCATGGGAGGTTCGTGGTGGAGAAGAACAGCCTCAAGGTGACGTCGCCCAGCGACATGAAGGGCACCTACGAGTGCGCCATTGGCAACTTCGGCGTGCCCCAGTACGGCGGCACCATGGTCGGCGTCGTCGCCTACCCCAAGGCCAACAAGAAGGCCTGCAAGAGCTTCGACGATTTTGACATCTCCTACAAGGCCAAACCGGGCTCACTCCCCACCTTCCTCCTCGTCGATAGGGGAGATTGCTTTTTCACAAAGAAGGCATGGAATGCACAAAACGCAGGAGCAGCAGCCATCCTTGTTGCTGATGACAAGACTGAACCCCTGATTACAATGGACACGCCTGAAGAGAGTGGAAATACAGACTATTTAGAGAATATCACCATTCCTTCTGCGCTGATAACCAAGAGCTTTGGGGACAAGCTCAAGAAAGCAATTGATAATGGTGACATGGTTAATGTGAATTTGGATTGGAGGGAGTCCCTGCCTCACCCTGATGAGCGTGTTGAGTACGAATTTTGGACTAACAGTAATGATGAGTGTGGCCCTAAATGTGATAGCCAGATTGATTTTGTCAAGAGCTTCAAAGGAGCAGCACAGGTACTTGAGAAGAAGGGATACACACAGTTCACTCCTCATTACATTACCTGGTATTGCCCAGATTCCTTCATTCTAAGCAAGCAGTGCAAGTCCCAGTGTATCAACCATGGGAGATATTGTGCACCTGACCCGGAACAGGATTTCAGCAAAGGGTATGATGGGAAAGATGTGGTAGTCCAGAATTTACGTCAAGTCTGTGTTTATAAAGTTGCTAAGGAGCATGGAAAACCTTGGCTGTGGTGGGACTACGTGACAGATTTTGCAATCCGGTGCCCAATGAAGGAAAAGAAGTACACCAAGGAATGCGCTGATGGAGTTATCAAGTCACTTGGTCTTGATCACAAAGCCATAGATAAGTGCATTGCTGATCCAGATGCTGATAAAGAAAATCCTGTGCTGAAAGCTGAACAGGATGCACAGATTGGCAAGGGCTCTCGTGGTGATGTTACCATCTTACCGACTCTTGTAATCAACAATAGACAATACAGAGGGAAACTTGATAAAGGAGCGGTTCTTAAGGCAATTTGTGCTGGTTTTCGAGAAACCACTGAACCAGCTGTTTGCTTGAGTGAAGATATACAAACAAATGAGTGCTTGGA GAACAATGGTGGCTGTTGGCAAGACAAGGCTGCTAACATCTCTGCATGCAAGGACACTTTTCGT GGAAGAGTTTGTGAATGTCCAGTTGTGAAAGGTGTTAAATTTGTTGGTGATGGCTACACTCACTGTGAAGCTTCGGGATCTGGCCATTGTGAAATTAACAATGGAGGGTGCTGGAAGGATTCCAGGCATGGCCGGACATATTCTGCCTGCACGAATGATGGTTGTAAATGTCCGGATGGGTTCAAAGGTGATGGAGTCCACAAATGCGAAGATATTGATGAATGCAAGGAAAGGACTGCATGCCAGTGCAAGGAATGTAAATGCAAGAACACATGGGGAAGCTATGAGTGCGGTTGCAGTGGCGGCTTGCTTTATATGAAGGAGCATGATACATGCATAAGCAAAAATGCAGCAACAGAGGTAGGATGGAAC TTCTTGTGGGTGATCTTCTTTGGCCTAGTGGTAGCCGGCATTGCAGGATACGCAGTATACAAGTACAGGATCCGGAGGTACATGGATTCAGAGATCCGCGCCATCATGGCCCAGTACATGCCCCTGGACAACCAAGGAGATGTTCCCAATCATTCTCACCATATCGAGCTATGAAAAGAGTGAGGATAGCATGCAACTTCCCCCCATG TTGCCCAAATGGGATGAGAAGAGGTGAACAACTCCTGGAGATCATGACACAGCCTGACGATATGTGTAGTAGTATCACTCTGACGATCTTATGTTTAGCAAATTTAGCCCATGTAAATTTCTGGATTATCCTGTGGCCGCATAATTTCAATCGTACCTGGCTGCTTTGCTCCCATATAGCGCTGGGGAAATATGGAGATTGCAAAATTAGGCAAGTTTGTGATCTCGAGGAAGAACACTAGTATGGCATTTCCCACCAAAAAAGACTAGTTTGGAAAGCATGAATTTTGTATAGAATTTTCGTGTGAATCAGTTTTGCTTG ] [+] EMBL AK102691 [ AACTCGCGGAAATCCCGTCCCCTCCCAAAATCTCACCAACGAGTCCACCCCAAATCCATCCACGAATCTCTTCCTCACTCCAACTGCCTCCCTCCGCCGTCAAAATCCAATCTTTCCTCTCACCTCCGCCGCTTTCGGCACGCCCCTTCAACCCCAAGATCGATACTCTCTCCACCAATCCGATCCAATCCGCAGCTGGGTTCCACGAATTGCAAAGGTCTAGGCGCGGATTGGAGCATGGGGCTCCGATCCCCCAACTCGATGCTGTGGCTAGTACTACTGGTGTGGGCGGCGCTGCTGTGCGGTAGCTGCCATGGGAGGTTCGTGGTGGAGAAGAACAGCCTCAAGGTGACGTCGCCCAGCGACATGAAGGGCACCTACGAGTGCGCCATTGGCAACTTCGGCGTGCCCCAGTACGGCGGCACCATGGTCGGCGTCGTCGCCTACCCCAAGGCCAACAAGAAGGCCTGCAAGAGCTTCGACGATTTTGACATCTCCTACAAGGCCAAACCGGGCTCACTCCCCACCTTCCTCCTCGTCGATAGGGGAGATTGCTTTTTCACAAAGAAGGCATGGAATGCACAAAACGCAGGAGCAGCAGCCATCCTTGTTGCTGATGACAAGACTGAACCCCTGATTACAATGGACACGCCTGGAGAGAGTGGAAATACAGACTATTTAGAGAATATCACCATTCCTTCTGCGCTGATAACCAAGAGCTTTGGGGACAAGCTCAAGAAAGCAATTGATAATGGTGACATGGTTAATGTGAATTTGGATTGGAGGGAGTCCCTGCCTCACCCTGATGAGCGTGTTGAGTACGAATTTTGGACTAACAGTAATGATGAGTGTGGCCCTAAATGTGATAGCCAGATTGATTTTGTCAAGAGCTTCAAAGGAGCAGCACAGGTACTTGAGAAGAAGGGATACACACAGTTCACTCCTCATTACATTACCTGGTATTGCCCAGATTCCTTCATTCTAAGCAAGCAGTGCAAGTCCCAGTGTATCAACCATGGGAGATATTGTGCACCTGACCCGGAACAGGATTTCAGCAAAGGGTATGATGGGAAAGATGTGGTAGTCCAGAATTTACGTCAAGTCTGTGTTTATAAAGTTGCTAAGGAGCATGGAAAACCTTGGCTGTGGTGGGACTACGTGACAGATTTTGCAATCCGGTGCCCAATGAAGGAAAAGAAGTACACCAAGGAATGCGCTGATGGAGTTATCAAGTCACTTGGTCTTGATCACAAAGCCATAGATAAGTGCATTGCTGATCCAGATGCTGATAAAGAAAATCCTGTGCTGAAAGCTGAACAGGATGCACAGATTGGCAAGGGCTCTCGTGGTGATGTTACCATCTTACCGACTCTTGTAATCAACAATAGACAATACAGAGGGAAACTTGATAAAGGAGCGGTTCTTAAGGCAATTTGTGCTGGTTTTCGAGAAACCACTGAACCAGCTGTTTGCTTGAGTGAAGATATACAAACAAATGAGTGCTTGGA GAACAATGGTGGCTGTTGGCAAGACAAGGCTGCTAACATCTCTGCATGCAAGGACACTTTTCGT GGAAGAGTTTGTGAATGTCCAGTTGTGAAAGGTGTTAAATTTGTTGGTGATGGCTACACTCACTGTGAAGCTTCGGGATCTGGCCATTGTGAAATTAACAATGGAGGGTGCTGGAAGGATTCCAGGCATGGCCGGACATATTCTGCCTGCACGAATGATGGTTGTAAATGTCCGGATGGGTTCAAAGGTGATGGAGTCCACAAATGCGAAGATATTGATGAATGCAAGGAAAGGACTGCATGCCAGTGCAAGGAATGTAAATGCAAGAACACATGGGGAAGCTATGAGTGCGGTTGCAGTGGCGGCTTGCTTTATATGAAGGAGCATGATACATGCATAAGCAAAAATGCAGCAACAGAGGTAGGATGGAAC TTCTTGTGGGTGATCTTCTTTGGCCTAGTGGTAGCCGGCATTGCAGGATACGCAGTATACAAGTACAGGATCCGGAGGTACATGGATTCAGAGATCCGCGCCATCATGGCCCAGTACATGCCCCTGGACAACCAAGGAGATGTTCCCAATCATTCTCACCATATCGAGCTATGAAAAGAGTGAGGATAGCATGCAACTTCCCCCCATG TTGCCCAAATGGGATGAGAAGAGGTGAACAACTCCTGGAGATCATGACACAGCCTGACGATATGTGTAGTAGTATCACTCTGACGATCTTATGTTTAGCAAATTTAGCCCATGTAAATTTCTGGATTATCCTGTGGCCGCATAATTTCAATCGTACCTGGCTGCTTTGCTCCCATATAGCGCTGGGGAAATATGGAGATTGCAAAATTAGGCAAGTTTGTGATCTCGAGGAAGAACACTAGTATGGCATTTCCCACCAAAAAAGACTAGTTTGGAAAGCATGAATTTTGTATAGAATTTTCGTGTGAATCAGTTTTGCTTGGTTCTTGCGGAAAAAGAAAAATCAGGCATTCCATACATGTTGGTGGAAAAGGATGCC] [+] EMBL C72582 [ GAGATATTGTGCACCTGACCCGGAACAGGATTTCAGCAAAGGGTATGATGGGAAAGATGTGGTAGTCCAGAATTTACGTCAAGTCTGTGTTTATAAAGTTGCTAAGGAGCATGGAAAACCTTGGCTGTGGTGGGACTACGTGACAGATTTTGCAATCCGGTGCCCAATGAAGGAAAAGAAGTACACCAAGGAATGCGCTGATGGAGTTATCAAGTCACTTGGTCTTGATCACAAAGCCATAGATAAGTGCATTGGTGATCCAGATGCTGATAAAGAAAATCCTGTGCTGAAANCTGAACAGGATGCACAGATTGGCAAGGGCTCTCGTGGTGATGTTACCATCTTACCGACTCTTGTAATCAACAATAGACAATACAGNGGGAAACTTGATAAAGGAGCGGTTCTTAAGGCAATTTGTGCTGG TTTCG GGAACCNCTG ACCA ] [+] EMBL OSS2913A [ ATAGATAAGTGCATTGGTGATCCAGATGCTGATAAAGAAAATCCTGTGCTGAAAG TGAACAGGATGCACAGATTGGCAAGGGCTCTCGTGGTGATGTTACCATCTTACCGACTCTTGTAATCAACAATAGACAATACAGAGGGAAACTTGATAAAGGAGCGGTTCTTAAGGCAATTTGTGCTGGTTTTCGAGAAACCACTGAACCAGCTGTTTGCTTGAGTGAAGATATACAAACAAATGAGTGCTTGGAGGAACAATGGTGGCTGTTGGCAAGACAAGGCTGCTAACATCTCTGCATGCAAGGACACTTTTCGT GGGAGA ] [+] EMBL OSS3579A [ ATAGATAAGTGCATTGGTGATCCAGATGCTGATAAAGAAAATCCTGTGCTGAAAG TGAACAGGATGCACAGATTGGCAAGGGCTCTCGTGGTGATGTTACCATCTTACCGACTCTTGTAATCAACAATAGACAATACAGAGGGAAACTTGATAAAGGAGCGGTTCTTAAGGCAATTTGTGCTGGTTTTCGAGAAACCACTGAACCAGCTGTTTGCTTGAGTGAAGATATACAANCAAATGAGTGCTTGGA GAACAATGGTGGCTGTTGGCAAGACAAGGCTGCTAACATCTCTGCATGCAAGGACACTTTTCGTGGGAAGAGTTTGTGAATGTCCAGTTGTAAAAGGTGTTAAATTTGTTGGTGATGGCTACACTCACTGTGAAGCTTCGGGATCTGGC ] [+] EMBL OSS3185A [ ATAGATAAGTGCATTGGTGATCCAGATGCTGATAAAGAAAATCCTGTGCTGAAAGCTGAACAGGATGCACAGATTGGCAAGGGCTCTCGTGGTGATGTTACCATCTTACCGACTCTTGTAATCAACAATAGACAATACAGAGGGAAACTTGATAAAGGAGCGGTTCTTAAGGCAATTTGTGCTGGTTTTCGAGAAACCACTGAACCAGCTGTTTGCTTGAGTGAAGATATACAAACAAATGAGTGCTTGGA GAACAATGGTGGCTGTTGGCAAGACAAGGCTGCTAACATCTCTGCATGCAAGGACA ] [+] EMBL C28755 [ TGTCCGGATGGGTTCAAAGGTGATGGAGTCCACAAATGCGAAGATATTGATGAATGCAAGGAAAGGACTGCATGCCAGTNCAAGGAATGTAAATGCAAGAACACATGGGGAAGCTATGAGTGCGGTTGCAGTGGCGGCTTGCTTTATATGAAGGAGCATGATACATGCATAAGCAAAAATGCAGCAACAGAGGTAGGATGGAAC TTCTTGTGGGTGATCTTCTTTGGCCTAGTGGTAGCCGGCATTGCAGGATACGCAGTATACAAGTACAGGATCCGGAGGTACATGGATTCAGAGATCCGCGCCATCATGGCCCAGTACATGCCCCTGGACAACCAAGGAGATGTTCCCAATCATTCTCACCATATCGNGCTATGAAAAGAGTTAGGATAGCATGCAACTTNCCCCCATGTTTNCCCAATTGGGTTNAGA ] [+] EMBL AA751345 [ ACTGCATGCCAGT CAAGGAATGCAAATGCAAGAACACATGGGGAAGCTATGAATGCGGTTGCAGTGGCGGCTTGC TTATAT AAGGAGCATGATAC TGCATAA CAAAAATGCAGCAACAGAGGTAGGATGGAAC TT TTGTGGGTGATCTTCTTTGGCCTAGTGGTAGCAGGCATTCGAGGATAC C GTAT ] [+] EMBL AA752230 [ CCAGTGCAAGGAATGCAAATGCAAGAACACATGGGGAAGCTATGAATGCGGTTGCAGTGGCGGCTTGCTTTATATGAAGGAGCATGATACATGCATAAGCAAAAATGCAGCAACAGAGGTAGGATGGAACGTTCTTGTGGGTGATCTTCTTTGGCCTAGTGGTAGCAGGCAT ] consensusID : consensus_14119#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 683 fasta sequence [GGGGTCCAAAAGGANTTTNNGAANCNGGGAGGGNTCCCCCTNCCAGGNATCAATCCCAGAANANNGGGANTTTGAANGGNNCCAGGGGGGTTCTTTNTTGGAGGGGCNGAAACNNAAAACCAAAAGGCNCAAACNGNGTTGGGGGGAACTTNTGGGGGANATTTTTTTGGCCCNAGTGGTAACCAGGCATTGCAGGGAAACCCAGTAAACAAAAACAGAATCGGGAGGAACATGGATTCAGAGATCCGCGCCNTCATGGCCCAGAACATGCCCCTTGGACAACCAAGGAGATGTTCCCAATCATTCTCACCATATCGAGCTATGAAAAGAGGGAGGAAAACATGCAACTTCCCCCCATGTTGCTCAAATGGGATGAGAAGAGGTGAAAAACTGGAGATCATGAGCTGCAAATGAACACACAGCCTGACGATATGTGTGGTAGTATCACTCTGAGGATCTTATGTTTAGCAAATTTAGCCCATTGTAAATTTTTGGATTATCCTGTGGCCGCATAGTTTCAAATCGTACCTGGCTGCTTTGCTCCCATATAGCGCTGGGGAAATATGGAGATTGCAAAATTAGGCAAGTTTGTGATNTCGAGGAAGAACNCAAGTATGGCATTCCCCNCCCAAAAAGACCTGTTTGGAAAGCATGAATTTTGTATAGAAAAAAAAAAAAAAAAA] [+] EMBL AA753860 [GGGGTCCAAAAGGANTTTNNGAANCNGGGAGGGNTCCCCCTNCCAGGNATCAATCCCAGAANANNGGGANTTTGAANGGNNCCAGGGGGGTTCTTTNTTGGAGGGGCNGAAACNNAAAACCAAAAGGCNCAAACNGNGTTGGGGGGAACTTNTGGGGGANATTTTTTTGGCCCNAGTGGTAACCAGGCATTGCAGGGAAACCCAGTAAACAAAAACAGAATCGGGAGGAACATGGATTCAGAGATCCGCGCCNTCATGGCCCAGAACATGCCCCTTGGACAACCAAGGAGATGTTCCCAATCATTCTCACCATATCGAGCTATGAAAAGAGGGAGGAAAACATGCAACTTCCCCCCATGTTGCTCAAATGGGATGAGAAGAGGTGAAAAACTGGAGATCATGAGCTGCAAATGAACACACAGCCTGACGATATGTGTGGTAGTATCACTCTGAGGATCTTATGTTTAGCAAATTTAGCCCATTGTAAATTTCTGGATTATCCTGTGGCCGCATAGTTTCAAATCGTACCTGGCTGCTTTGCTCCCATATAGCGCTGGGGAAATATGGAGATTGCAAAATTAGGCA ] [+] EMBL AU174272 [ TATGTTTAGCAAATTTAGCCCATTGTAAATTTTTGGATTATCCTGTGGCCGCATAGTTTCAAATCGTACCTGGCTGCTTTGCTCCCATATAGCGCTGGGGAAATATGGAGATTGCAAAATTAGGCAAGTTTGTGATNTCGAGGAAGAACNCAAGTATGGCATTCCCCNCCCAAAAAGACCTGTTTGGAAAGCATGAATTTTGTATAGAAAAAAAAAAAAAAAAA] [+] EMBL AU223065 [ TATGTTTAGCAAATTTAGCCCNTTGTAAATTTTTGGATTATCCTGTGGCCGCATAGTTTCAAATCGTACCTGGCTGCTTTGCTCCCATATAGCGCTGGGGAAATATGGAGATTGCAAAATTAGGCAAGTTTGTGATNTCGAGGAAGAACNCAAGTATGGCATTCCCCNCCCAAAAAGACCTGTTTGGAAAGCATGAATTTTGTATAGAAAAAAAAAAAAAAAAA] [+] EMBL AU223083 [ TATGTTTAGCAAATTTAGCCCNTTGTAAATTTTTGGATTATCCTGTGGCCGCATAGTTTCAAATCGTACCTGGCTGCTTTGCTCCCATATAGCGCTGGGGAAATATGGAGATTGCAAAATTAGGCAAGTTTGTGATNTNGAGGAAGAACNCAAGTATGGCATTCCCCNCCCAAAAANACCTGTTTGGAAAGCATGAATTTTGTNTTGNAAAAAAAAAAAAAAAA] consensusID : consensus_14119#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 514 fasta sequence [AGGATCCGNAGGTNCATGGATTTCAGAGATCCGCGCCATCATGGCCCCAGTACATGCCCCTGGACAACCAAGGAGATGTTCCCAATCATTCTCACCATATCGAGCTATGAAAAGAGGGAGGAAAACATGCAACTTCCCCCCATGTTGCTCAAATGGGATGAGAAGAGGTGAAAAACTGGAGATCATGAGCTGCAAATGAACACACAGCCTGACGATATGTGTGGTAGTATCACTCTGAGGATCTTATGTTTAGCAAATTTAGCCCATTGTAAATTTCTGGATTATCCTGTGGCCGCATAGTTTCAAATCGTACCTGGCTGCTTTGCTCCCATATAGCGCTGGGGAAATATGGAGATTGCAAAATTAGGCAAGTTTGTGATCTCGAGGAAGAACACAAGTATGGCATTCCCCACCNAAAAAGACCTGTTTGGAAAGCATGAATTTTGTATAGAATTTTCGTGTGAATCAGTTTTGCTTGGTTCTTGCGGAAAAAGAAAAAAAAAAAAAAAAAAAA] [+] EMBL C96886 [AGGATCCGNAGGTNCATGGATTTCAGAGATCCGCGCCATCATGGCCCCAGTACATGCCCCTGGACAACCAAGGAGATGTTCCCAATCATTCTCACCATATCGAGCTATGAAAAGAGGGAGGAAAACATGCAACTTCCCCCCATGTTGCTCAAATGGGATGAGAAGAGGTGAAAAACTGGAGATCATGAGCTGCAAATGAACACACAGCCTGACGATATGTGTGGTAGTATCACTCTGAGGATCTTATGTTTAGCAAATTTAGCCCATTGTAAATTTCTGGATTATCCTGTGGCCGCATAGTTTCAAATCGTACCTGGCTGCTTTGCTCCCATATAGCGCTGGGGAAATATGGAGATTGCAAAATTAGGCAAGTTTGTGATCTCGAGGAAGAACACAAGTATGGCATTCCCCACCNAAAAAGACCTGTTTGGAAAGCATGAATTTTGTATAGAATTTTCGTGTGAATCAGTTTTGCTTGGTTCTTGCGGAAAAAGAAAAAAAAAAAAAAAAAAAA] consensusID : consensus_14119#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 345 fasta sequence [CCGCCGTCAAAATCCAATCTTTCCTCTCCACTCCGCCGNTTTCGGCACGCCCTTTCAACCCCAAGATCGNTCCTACCNCCNACCAATCCGATCCAATCCGCAGCTGGGTTCCACGAATTGCAAAGGTCTAGGTGTGGATTNGAGCATGGAGCTCCNATCCNCCAACTTGATGATGTGGTTAGCACTACTGGTGTGGGNCGCGCTGCTGTGCGGTANTTGNCATGGGAGGTTCGTGGTGGAGAAGAACAGCCTCAAGGTGACGTCGCCCAGCGACATGGAAGGGCACCTACGAGTGCGCCATTGNCAACTTCGGNGTGCCCCAGTACGGNGGCACCATGGTCGGCG] [+] EMBL C26775 [CCGCCGTCAAAATCCAATCTTTCCTCTCCACTCCGCCGNTTTCGGCACGCCCTTTCAACCCCAAGATCGNTCCTACCNCCNACCAATCCGATCCAATCCGCAGCTGGGTTCCACGAATTGCAAAGGTCTAGGTGTGGATTNGAGCATGGAGCTCCNATCCNCCAACTTGATGATGTGGTTAGCACTACTGGTGTGGGNCGCGCTGCTGTGCGGTANTTGNCATGGGAGGTTCGTGGTGGAGAAGAACAGCCTCAAGGTGACGTCGCCCAGCGACATGGAAGGGCACCTACGAGTGCGCCATTGNCAACTTCGGNGTGCCCCAGTACGGNGGCACCATGGTCGGCG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_14119#0 ------------------------------------------------------------ consensus_14119#3 ------------------------------------------------------------ consensus_14119#1 GGGGTCCAAAAGGANTTTNNGAANCNGGGAGGGNTCCCCCTNCCAGGNATCAATCCCAGA 60 consensus_14119#2 ------------------------------------------------------------ consensus_14119#0 ----------------------------------ATGGACACGTTGCTCATGCTGCTTAA 26 consensus_14119#3 ------------------------------------------------------------ consensus_14119#1 ANANNGGGANTTTGAANGGNNCCAGGGGGGTTCTTTNTTGGAGGGGCNGAAACNNAAAAC 120 consensus_14119#2 ------------------------------------------------------------ consensus_14119#0 CTGAATCAGGTTCCCTTCCCTCTGCTTGCTTCACGAACTCGCGGAAATCCCGTCCCCTCC 86 consensus_14119#3 ------------------------------------------------------------ consensus_14119#1 CAAAAGGCNCAAACNGNGTTGGGGGGAACTTNTGGGGGANATTTTTTTGGCCCNAGTGGT 180 consensus_14119#2 ------------------------------------------------------------ consensus_14119#0 CAAAATCTCACCAACGAGTCCACCCCAAATCCATCCACGAATCTCTTCCTCACTCCAACT 146 consensus_14119#3 ------------------------------------------------------------ consensus_14119#1 AACCAGGCATTGCAGGGAAACCCAGTAAACAAAAACAGAATCGGGAGGAACATGGATT-C 239 consensus_14119#2 ------------------------------------AGGATCCGNAGGTNCATGGATTTC 24 consensus_14119#0 GCCTCCCTCCGCCGTCAAAATCC--AATCTTTCCTCT----CACCTCCGCCGCTTTCGGC 200 consensus_14119#3 --------CCGCCGTCAAAATCC--AATCTTTCCTCT----CCACTCCGCCGNTTTCGGC 46 consensus_14119#1 AGAGATCCGCGCCNTCATGGCCC-AGAACATGCCCCTTGGACAACCAAGGAGATGTTCCC 298 consensus_14119#2 AGAGATCCGCGCCATCATGGCCCCAGTACATGCCCCT-GGACAACCAAGGAGATGTTCCC 83 **** *** ** * * ** ** * * * * * * * consensus_14119#0 ACGCCCCTTCAACCCCAAGATCGATACT-CTCTCCACCAATCCGATCCAATCCGCAGCTG 259 consensus_14119#3 ACGCCCTTTCAACCCCAAGATCGNTCCTACCNCCNACCAATCCGATCCAATCCGCAGCTG 106 consensus_14119#1 AATCATTCTCACCATATCGAGCTATGAAAAGAGGGAGGAAAAC-ATGCAACTTCCCCCCA 357 consensus_14119#2 AATCATTCTCACCATATCGAGCTATGAAAAGAGGGAGGAAAAC-ATGCAACTTCCCCCCA 142 * * *** * ** * * * ** * ** *** * * consensus_14119#0 GGTTCCACGAATTGCAAAGGTCTAGGCGCGGATTGGAGCATG--GGGCTCC----GATCC 313 consensus_14119#3 GGTTCCACGAATTGCAAAGGTCTAGGTGTGGATTNGAGCATG--GAGCTCC----NATCC 160 consensus_14119#1 TGTTGCTCAAATGGGATGAGAAGAGGTGAAAAACTGGAGATCATGAGCTGCAAATGAACA 417 consensus_14119#2 TGTTGCTCAAATGGGATGAGAAGAGGTGAAAAACTGGAGATCATGAGCTGCAAATGAACA 202 *** * * *** * * * *** * * * ** * *** * * * consensus_14119#0 CCCAACTCGATGCTGTGGCTAGTACTACTGGTGTGGGCGGCGC-TGCTGTGCGGTAGCTG 372 consensus_14119#3 NCCAACTTGATGATGTGGTTAGCACTACTGGTGTGGGNCGCGC-TGCTGTGCGGTANTTG 219 consensus_14119#1 CACAGCCTGACGATATGTGTGGTAGTATCACTCTGAGGATCTTATGTTTAGCAAATTTAG 477 consensus_14119#2 CACAGCCTGACGATATGTGTGGTAGTATCACTCTGAGGATCTTATGTTTAGCAAATTTAG 262 ** * ** * * ** * * * ** * ** * * ** * ** * consensus_14119#0 CC-ATGGGAGGTTCGTGG-------TGGAGAAGAACAGCCTCAA---------GGTGACG 415 consensus_14119#3 NC-ATGGGAGGTTCGTGG-------TGGAGAAGAACAGCCTCAA---------GGTGACG 262 consensus_14119#1 CCCATTGTAAATTTTTGGATTATCCTGTGGCCGCATAGTTTCAAATCGTACCTGGCTGCT 537 consensus_14119#2 CCCATTGTAAATTTCTGGATTATCCTGTGGCCGCATAGTTTCAAATCGTACCTGGCTGCT 322 * ** * * ** *** ** * * * ** **** ** * consensus_14119#0 TCGCCCAGCGACATG-AAGGGCACCTACGAG---TGCGCCATT-GGCAACTTCGGCGTGC 470 consensus_14119#3 TCGCCCAGCGACATGGAAGGGCACCTACGAG---TGCGCCATT-GNCAACTTCGGNGTGC 318 consensus_14119#1 TTGCTCCCATATAGCGCTGGGGAAATATGGAGATTGCAAAATTAGGCAAGTTTGTGATNT 597 consensus_14119#2 TTGCTCCCATATAGCGCTGGGGAAATATGGAGATTGCAAAATTAGGCAAGTTTGTGATCT 382 * ** * * * *** * ** * *** *** * *** ** * * consensus_14119#0 CCCAGTACGGCGGCACCATGGTCGGCGTCGTCGCCTACCCCAAGGCCAACAAGAAGGCCT 530 consensus_14119#3 CCCAGTACGGNGGCACCATGGTCGGCG--------------------------------- 345 consensus_14119#1 CGAGGAAGAACNCAAGTATGGCATTCCCCNCCCAAAAAGACCTGTTTGGAAAGCATGAAT 657 consensus_14119#2 CGAGGAAGAACACAAGTATGGCATTCCCCACCNAAAAAGACCTGTTTGGAAAGCATGAAT 442 * * * * **** * consensus_14119#0 GCAAGAGCTTCGACGATTTTGACATCTCCTACAAGGCCAAACCGGGCTCACTCCCCACCT 590 consensus_14119#3 ------------------------------------------------------------ consensus_14119#1 TTTGTATAGAAAAAAAAAAAAAAAAA---------------------------------- 683 consensus_14119#2 TTTGTATAGAATTTTCGTGTGAATCAGTTTTGCTTGGTTCTTGCGGAAAAAGAAAAAAAA 502 consensus_14119#0 TCCTCCTCGTCGATAGGGGAGATTGCTTTTTCACAAAGAAGGCATGGAATGCACAAAACG 650 consensus_14119#3 ------------------------------------------------------------ consensus_14119#1 ------------------------------------------------------------ consensus_14119#2 AAAAAAAAAAAA------------------------------------------------ 514 consensus_14119#0 CAGGAGCAGCAGCCATCCTTGTTGCTGATGACAAGACTGAACCCCTGATTACAATGGACA 710 consensus_14119#3 ------------------------------------------------------------ consensus_14119#1 ------------------------------------------------------------ consensus_14119#2 ------------------------------------------------------------ consensus_14119#0 CGCCTGAAGAGAGTGGAAATACAGACTATTTAGAGAATATCACCATTCCTTCTGCGCTGA 770 consensus_14119#3 ------------------------------------------------------------ consensus_14119#1 ------------------------------------------------------------ consensus_14119#2 ------------------------------------------------------------ consensus_14119#0 TAACCAAGAGCTTTGGGGACAAGCTCAAGAAAGCAATTGATAATGGTGACATGGTTAATG 830 consensus_14119#3 ------------------------------------------------------------ consensus_14119#1 ------------------------------------------------------------ consensus_14119#2 ------------------------------------------------------------ consensus_14119#0 TGAATTTGGATTGGAGGGAGTCCCTGCCTCACCCTGATGAGCGTGTTGAGTACGAATTTT 890 consensus_14119#3 ------------------------------------------------------------ consensus_14119#1 ------------------------------------------------------------ consensus_14119#2 ------------------------------------------------------------ consensus_14119#0 GGACTAACAGTAATGATGAGTGTGGCCCTAAATGTGATAGCCAGATTGATTTTGTCAAGA 950 consensus_14119#3 ------------------------------------------------------------ consensus_14119#1 ------------------------------------------------------------ consensus_14119#2 ------------------------------------------------------------ consensus_14119#0 GCTTCAAAGGAGCAGCACAGGTACTTGAGAAGAAGGGATACACACAGTTCACTCCTCATT 1010 consensus_14119#3 ------------------------------------------------------------ consensus_14119#1 ------------------------------------------------------------ consensus_14119#2 ------------------------------------------------------------ consensus_14119#0 ACATTACCTGGTATTGCCCAGATTCCTTCATTCTAAGCAAGCAGTGCAAGTCCCAGTGTA 1070 consensus_14119#3 ------------------------------------------------------------ consensus_14119#1 ------------------------------------------------------------ consensus_14119#2 ------------------------------------------------------------ consensus_14119#0 TCAACCATGGGAGATATTGTGCACCTGACCCGGAACAGGATTTCAGCAAAGGGTATGATG 1130 consensus_14119#3 ------------------------------------------------------------ consensus_14119#1 ------------------------------------------------------------ consensus_14119#2 ------------------------------------------------------------ consensus_14119#0 GGAAAGATGTGGTAGTCCAGAATTTACGTCAAGTCTGTGTTTATAAAGTTGCTAAGGAGC 1190 consensus_14119#3 ------------------------------------------------------------ consensus_14119#1 ------------------------------------------------------------ consensus_14119#2 ------------------------------------------------------------ consensus_14119#0 ATGGAAAACCTTGGCTGTGGTGGGACTACGTGACAGATTTTGCAATCCGGTGCCCAATGA 1250 consensus_14119#3 ------------------------------------------------------------ consensus_14119#1 ------------------------------------------------------------ consensus_14119#2 ------------------------------------------------------------ consensus_14119#0 AGGAAAAGAAGTACACCAAGGAATGCGCTGATGGAGTTATCAAGTCACTTGGTCTTGATC 1310 consensus_14119#3 ------------------------------------------------------------ consensus_14119#1 ------------------------------------------------------------ consensus_14119#2 ------------------------------------------------------------ consensus_14119#0 ACAAAGCCATAGATAAGTGCATTGGTGATCCAGATGCTGATAAAGAAAATCCTGTGCTGA 1370 consensus_14119#3 ------------------------------------------------------------ consensus_14119#1 ------------------------------------------------------------ consensus_14119#2 ------------------------------------------------------------ consensus_14119#0 AAGCTGAACAGGATGCACAGATTGGCAAGGGCTCTCGTGGTGATGTTACCATCTTACCGA 1430 consensus_14119#3 ------------------------------------------------------------ consensus_14119#1 ------------------------------------------------------------ consensus_14119#2 ------------------------------------------------------------ consensus_14119#0 CTCTTGTAATCAACAATAGACAATACAGAGGGAAACTTGATAAAGGAGCGGTTCTTAAGG 1490 consensus_14119#3 ------------------------------------------------------------ consensus_14119#1 ------------------------------------------------------------ consensus_14119#2 ------------------------------------------------------------ consensus_14119#0 CAATTTGTGCTGGTTTTCGAGAAACCACTGAACCAGCTGTTTGCTTGAGTGAAGATATAC 1550 consensus_14119#3 ------------------------------------------------------------ consensus_14119#1 ------------------------------------------------------------ consensus_14119#2 ------------------------------------------------------------ consensus_14119#0 AAACAAATGAGTGCTTGGAGAACAATGGTGGCTGTTGGCAAGACAAGGCTGCTAACATCT 1610 consensus_14119#3 ------------------------------------------------------------ consensus_14119#1 ------------------------------------------------------------ consensus_14119#2 ------------------------------------------------------------ consensus_14119#0 CTGCATGCAAGGACACTTTTCGTGGAAGAGTTTGTGAATGTCCAGTTGTGAAAGGTGTTA 1670 consensus_14119#3 ------------------------------------------------------------ consensus_14119#1 ------------------------------------------------------------ consensus_14119#2 ------------------------------------------------------------ consensus_14119#0 AATTTGTTGGTGATGGCTACACTCACTGTGAAGCTTCGGGATCTGGCCATTGTGAAATTA 1730 consensus_14119#3 ------------------------------------------------------------ consensus_14119#1 ------------------------------------------------------------ consensus_14119#2 ------------------------------------------------------------ consensus_14119#0 ACAATGGAGGGTGCTGGAAGGATTCCAGGCATGGCCGGACATATTCTGCCTGCACGAATG 1790 consensus_14119#3 ------------------------------------------------------------ consensus_14119#1 ------------------------------------------------------------ consensus_14119#2 ------------------------------------------------------------ consensus_14119#0 ATGGTTGTAAATGTCCGGATGGGTTCAAAGGTGATGGAGTCCACAAATGCGAAGATATTG 1850 consensus_14119#3 ------------------------------------------------------------ consensus_14119#1 ------------------------------------------------------------ consensus_14119#2 ------------------------------------------------------------ consensus_14119#0 ATGAATGCAAGGAAAGGACTGCATGCCAGTGCAAGGAATGTAAATGCAAGAACACATGGG 1910 consensus_14119#3 ------------------------------------------------------------ consensus_14119#1 ------------------------------------------------------------ consensus_14119#2 ------------------------------------------------------------ consensus_14119#0 GAAGCTATGAGTGCGGTTGCAGTGGCGGCTTGCTTTATATGAAGGAGCATGATACATGCA 1970 consensus_14119#3 ------------------------------------------------------------ consensus_14119#1 ------------------------------------------------------------ consensus_14119#2 ------------------------------------------------------------ consensus_14119#0 TAAGCAAAAATGCAGCAACAGAGGTAGGATGGAACTTCTTGTGGGTGATCTTCTTTGGCC 2030 consensus_14119#3 ------------------------------------------------------------ consensus_14119#1 ------------------------------------------------------------ consensus_14119#2 ------------------------------------------------------------ consensus_14119#0 TAGTGGTAGCCGGCATTGCAGGATACGCAGTATACAAGTACAGGATCCGGAGGTACATGG 2090 consensus_14119#3 ------------------------------------------------------------ consensus_14119#1 ------------------------------------------------------------ consensus_14119#2 ------------------------------------------------------------ consensus_14119#0 ATTCAGAGATCCGCGCCATCATGGCCCAGTACATGCCCCTGGACAACCAAGGAGATGTTC 2150 consensus_14119#3 ------------------------------------------------------------ consensus_14119#1 ------------------------------------------------------------ consensus_14119#2 ------------------------------------------------------------ consensus_14119#0 CCAATCATTCTCACCATATCGAGCTATGAAAAGAGTGAGGATAGCATGCAACTTCCCCCC 2210 consensus_14119#3 ------------------------------------------------------------ consensus_14119#1 ------------------------------------------------------------ consensus_14119#2 ------------------------------------------------------------ consensus_14119#0 ATGTTGCCCAAATGGGATGAGAAGAGGTGAACAACTCCTGGAGATCATGACACAGCCTGA 2270 consensus_14119#3 ------------------------------------------------------------ consensus_14119#1 ------------------------------------------------------------ consensus_14119#2 ------------------------------------------------------------ consensus_14119#0 CGATATGTGTAGTAGTATCACTCTGACGATCTTATGTTTAGCAAATTTAGCCCATGTAAA 2330 consensus_14119#3 ------------------------------------------------------------ consensus_14119#1 ------------------------------------------------------------ consensus_14119#2 ------------------------------------------------------------ consensus_14119#0 TTTCTGGATTATCCTGTGGCCGCATAATTTCAATCGTACCTGGCTGCTTTGCTCCCATAT 2390 consensus_14119#3 ------------------------------------------------------------ consensus_14119#1 ------------------------------------------------------------ consensus_14119#2 ------------------------------------------------------------ consensus_14119#0 AGCGCTGGGGAAATATGGAGATTGCAAAATTAGGCAAGTTTGTGATCTCGAGGAAGAACA 2450 consensus_14119#3 ------------------------------------------------------------ consensus_14119#1 ------------------------------------------------------------ consensus_14119#2 ------------------------------------------------------------ consensus_14119#0 CTAGTATGGCATTTCCCACCAAAAAAGACTAGTTTGGAAAGCATGAATTTTGTATAGAAT 2510 consensus_14119#3 ------------------------------------------------------------ consensus_14119#1 ------------------------------------------------------------ consensus_14119#2 ------------------------------------------------------------ consensus_14119#0 TTTCGTGTGAATCAGTTTTGCTTGGTTCTTGCGGAAAAAGAAAAATCAGGCATTCCATAC 2570 consensus_14119#3 ------------------------------------------------------------ consensus_14119#1 ------------------------------------------------------------ consensus_14119#2 ------------------------------------------------------------ consensus_14119#0 ATGTTGGTGGAAAAGGATGCC 2591 consensus_14119#3 --------------------- consensus_14119#1 --------------------- consensus_14119#2 --------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||