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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14122#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 2675 fasta sequence
[GGGCTAGAGAACCCTCCACCCCAAATAGCCACAGCCAAGAAACATCTAGGGTTGGAGGGAGTCCAGTCCACCACCACCAGGCGCGCCTCCAGTGCTCCCTGCTGTCCACGCCGGCGCCGCGCCTCCCCACCGTCCCCGCCGCCGTCCGCTCCGTCCCCACCGTCCAAGCCGCCAAGCCGGGGGCCGCGACGGAGCGACTCCTCGGGTCGCCGCCTCGCCGGTTGCGGGTTGCCGGCTTGGTGGCTTGGCGCGGCGCCTTCTCCAGTTCTCTTGCTTGGCAACTGATCCGGCGCTCCACCATTCAACCGACCCCTGTTGAGGTAAGGTGAGGTGAGGTGAGGTG-AGGATGGCGATGATGAACCGGACGCGGGATCTGCTGATGGAGGGGTTCGAGGGCCTCGTGCGGGAGGGCTCCTTCAGCTGGGCCCTCCCCCGCCGCGGGGCTTCGCCGGTGGACGACGCCGATGACCCCGACAGCTCCTCCTCCTCCTCCTCCGGCAAGCAGCCCTCCATCTCCGGCCTCTCCCCCAAGGCCAACGCCGTCGTCTCTCGCTGCTCCCGGGTACTTGGTACTTCCACGGATGAGCTGCAGTATGACTTTGATATGCAAGCATCTGATTCCATAAAGCAGCCAAGAAATTATGCAAGAAATTTTTTGGAATATTGTTGTTTGAGGGCACTTGCACATGCCTCACAAGTTGCAGGGTATCTTTCTGACAAAAGCTTTCGTCGCCTAAATTTTGATATGATGCTAGCTTGGGAAGTTCCCTCTTCTTCAAGCGAGCTCACTGTTAAGGTTGAAGTAGACAACACAGTCAGTTTAGAGGCTTTTTCAAGAATAGCACCTGCAATTCCAACAATCACTGATGTGGTAACATGTTCAAATCTATTTGATGTACTTTCATCTTCAAGTGGAGGCCGGCTTACATTTCCTGTATATGATAAGTACCTTACAGGATTGGACAGAGCAATTAAGAAAATGAAAGGACAATCTGAGTCCTCGCTTTTATCTGCCCAGCGGTCTCAGAGAGGAGAAAGGATTGTAGAAGTAGATGGAACATTGACGACTCAACCAGTACTTGAACATGTTGGGATTTCGACATGGCCAGGAAGGTTAACACTTACTGATCATGCTCTTTACTTCGAAGCACTTCGGGTTGTGACCTATGATAAGCCTAAAGCTTATGAGCTTGCCGAAGATCTAAAGCAGTCTGTTAAACCTGAGCTGACTGGTCCATGGGGCTCACGGCTATTTGACAAAGCTGTTATGTATAAATCAACAACTTTAACAGAACCAGTGATCATAGAATTTCCAGAGTTGGCTGGCCACTTTCGTCGTGACTATTGGCTGGCCATCATATCAGAAATTCTCTATGTCCACAGATTTGTTAGGAAGTTTGACATAAGTGGAGTTGACAAAGAGGAAACAATTTTGAAGGCTGTACTAAGCATTATGCGGCTACAAGCTATTGAAGAGTTAGCCATTCCAGTTTCTAATCGATTCGAGTCTCTTTTGATGTTTAATCTATGTGACAAACTTCCCGGAGGTGATGTAATACTTGAAACACTAGCTGGTTCTATATCATCGAGAAGATCAACTCAAGTTAACCAACCTGGCACTAGCAGTGGAAGGCATTCAATGTCCCCCTTTACTGTTCTGTCGAATCTTGGAGTGGTATCACCAATTAATAAAGGTGAGAGACTCTTTGTTGGCGAGATAGTTGTTGGGGAAATGAGTGCCTTGCAGAAGGTAGTTAATGAGTCAATGAACAACTATAAGAAGGTTGAATTGGCCCAAGCCACAGTTGATGGAGTCAAAGTTGATGGCCTGGATACAAACTTGGCAGTGATGAAGGAATTGCTATCTCCCGTAAGTGAGCTATGGAGGTTTTTGGTGTTGCTGGCATCTTGGGATGAGCCAATTAAGTCCATGGTATTTTGCTTTTCATCGTCTTATATCATTATCAGGGGGTGGTTAGTCTATTTTCTTGTTTTGGTGCTCTTGTTTTCGGCAGCTTTCATGTTCCTTACAAGACTAACTAGCCATGGAAAACCAATGACGGAGGTCAAAGTGACATCTCCACCTCCAATGAACACAATGGAGCAGCTCTTAGCTGTTCAAAATGCTATTTCCAAAGTTGAAGAGCTTGTTCAGGATGCAAATATTGTTCTTCTGAAGATTAGAGCTTTATTGTTGGCTTTTCCCTCCCAGGCTACTGATAGAGCTATACTTGCCTTGGTAGTGATGGCTCTGAGCCTTGCATTCGTGCCCACAAGGTTGCTTGTCCTGATGATGTTTCTGGAGGCATTCACGAACCACTCCCCACCAAGGAGAGCAAGCACAGAAAGGTGGACCAGAAGGTTAAGAGAGTGGTGGTTCAGCATTCCTGCAGCTCCAGTAGTCGTGGAGAAGGATAAAGAAGACAAGAAAACAAAATAAAAGATATATATGTATATTCAATGTAATTATGTGCCATGTTTGGCCGATGGGTTGGGGTGGATCACCAACGCTCGTCTTGTACAGTAGCAGCTAGTATTTTTCAATAAAAATGCGAGTTCTCACCTAGAATTAATTGCTTGCCTCGTACTTTGATTATTTCGTATATAGTTTCATCGGGTGATCGGGAATGTTGGACAACACCCCAGGTTTATGTGATTTTAGCTGAATTTCTTAC]
[+] EMBL AU166451 [GGGCTAGAGAACCCTCCACCCCAAATAGCCACAGCCAAGAAACATCTAGGGTTGGAGGGAGTCCAGTCCACCACCACCAGGCGCGCCTCCAGTGCTCCCTGCTGTCCACGCCGGCGCCGCGCCTCCCCACCGTCCCCGCCGCCGTCCGCTCCGTCCCCACCGTCCAAGCCGCCAAGCCGGGGGCCGCGACGGAGCGACTCCTCGGGTCGCCGCCTCGCCGGTTGCGGGTTGCCGGCTTGGTGGCTTGGCGCGGCGCCTTCTCCAGTTCTCTTGCTTGGCAACTGATCCGGCGCTCCACCATTCAACCGACCCCTGTTGAGGTAAGGTGAGGTGAGGTGAGGTGAAGGATGGCNATGATGAACCGGACGCGGGATCTGCTGATGGAGGGGTTCGAGGGCCTCGTGCGGGAGGGCTCCTTCAGC ]
[+] EMBL CB669260 [ AAATAGCCACAGCCAAGAAACATCTAGGGTTGGAGGGAGTCCAGTCCACCACCACCAGGCGCGCCTCCAGTGCTCCCTGCTGTCCACGCCGGCGCCGCGCCTCCCCACCGTCCCCGCCGCCGTCCGCTCCGTCCCCACCGTCCAAGCCGCCAAGCCGGGGGCCGCGACGGAGCGACTCCTCGGGTCGCCGCCTCGCCGGTTGCGGGTTGCCGGCTTGGTGGCTTGGCGCGGCGCCTTCTCCAGTTCTCTTGCTTGGCAACTGATCCGGCGCTCCACCATTCAACCGACCCCTGTTGAGGTAAGGTGAGGTGAGGTGAGGTG AGGATGGCGATGATGAACCGGACGCGGGATCTGCTGATGGAGGGGTTCGAGGGCCTCGTGCGGGAGGGCTCCTTCAGCTGGGCCCTCCCCCGCCGCGGGGCTTCGCCGGTGGACGACGCCGATGACCCCGACAGCTCCTCCTCCTCCTCCTCCGGCAAGCAGCCCTCCATCTCCGGCCTCTCCCCCAAGGCCAACGCCGTCGTCTCTCGCTGCTCCCGGGTACTTGGTACTTCCACGGATGAGCTGCAGTATGACTTTGATATGCAAGCATCTGATTCCATAAAGCAGCCAAGAAATTATGCAAGAAATTTTTTGGAATATTGTTGTTTGAGGGCACTTGCACATGCCTCACAAGTTGCAGGGTATCTTTCTGACAATAGCTTTCGTCGCCTAAATTT ]
[+] EMBL AK072882 [ TCCAGTCCACCACCACCAGGCGCGCCTCCAGTGCTCCCTGCTGTCCACGCCGGCGCCGCGCCTCCCCACCGTCCCCGCCGCCGTCCGCTCCGTCCCCACCGTCCAAGCCGCCAAGCCGGGGGCCGCGACGGAGCGACTCCTCGGGTCGCCGCCTCGCCGGTTGCGGGTTGCCGGCTTGGTGGCTTGGCGCGGCGCCTTCTCCAGTTCTCTTGCTTGGCAACTGATCCGGCGCTCCACCATTCAACCGACCCCTGTTGAGGTAAGGTGAGGTGAGGTGAGGTG AGGATGGCGATGATGAACCGGACGCGGGATCTGCTGATGGAGGGGTTCGAGGGCCTCGTGCGGGAGGGCTCCTTCAGCTGGGCCCTCCCCCGCCGCGGGGCTTCGCCGGTGGACGACGCCGATGACCCCGACAGCTCCTCCTCCTCCTCCTCCGGCAAGCAGCCCTCCATCTCCGGCCTCTCCCCCAAGGCCAACGCCGTCGTCTCTCGCTGCTCCCGGGTACTTGGTACTTCCACGGATGAGCTGCAGTATGACTTTGATATGCAAGCATCTGATTCCATAAAGCAGCCAAGAAATTATGCAAGAAATTTTTTGGAATATTGTTGTTTGAGGGCACTTGCACATGCCTCACAAGTTGCAGGGTATCTTTCTGACAAAAGCTTTCGTCGCCTAAATTTTGATATGATGCTAGCTTGGGAAGTTCCCTCTTCTTCAAGCGAGCTCACTGTTAAGGTTGAAGTAGACAACACAGTCAGTTTAGAGGCTTTTTCAAGAATAGCACCTGCAATTCCAACAATCACTGATGTGGTAACATGTTCAAATCTATTTGATGTACTTTCATCTTCAAGTGGAGGCCGGCTTACATTTCCTGTATATGATAAGTACCTTACAGGATTGGACAGAGCAATTAAGAAAATGAAAGGACAATCTGAGTCCTCGCTTTTATCTGCCCAGCGGTCTCAGAGAGGAGAAAGGATTGTAGAAGTAGATGGAACATTGACGACTCAACCAGTACTTGAACATGTTGGGATTTCGACATGGCCAGGAAGGTTAACACTTACTGATCATGCTCTTTACTTCGAAGCACTTCGGGTTGTGACCTATGATAAGCCTAAAGCTTATGAGCTTGCCGAAGATCTAAAGCAGTCTGTTAAACCTGAGCTGACTGGTCCATGGGGCTCACGGCTATTTGACAAAGCTGTTATGTATAAATCAACAACTTTAACAGAACCAGTGATCATAGAATTTCCAGAGTTGGCTGGCCACTTTCGTCGTGACTATTGGCTGGCCATCATATCAGAAATTCTCTATGTCCACAGATTTGTTAGGAAGTTTGACATAAGTGGAGTTGACAAAGAGGAAACAATTTTGAAGGCTGTACTAAGCATTATGCGGCTACAAGCTATTGAAGAGTTAGCCATTCCAGTTTCTAATCGATTCGAGTCTCTTTTGATGTTTAATCTATGTGACAAACTTCCCGGAGGTGATGTAATACTTGAAACACTAGCTGGTTCTATATCATCGAGAAGATCAACTCAAGTTAACCAACCTGGCACTAGCAGTGGAAGGCATTCAATGTCCCCCTTTACTGTTCTGTCGAATCTTGGAGTGGTATCACCAATTAATAAAGGTGAGAGACTCTTTGTTGGCGAGATAGTTGTTGGGGAAATGAGTGCCTTGCAGAAGGTAGTTAATGAGTCAATGAACAACTATAAGAAGGTTGAATTGGCCCAAGCCACAGTTGATGGAGTCAAAGTTGATGGCCTGGATACAAACTTGGCAGTGATGAAGGAATTGCTATCTCCCGTAAGTGAGCTATGGAGGTTTTTGGTGTTGCTGGCATCTTGGGATGAGCCAATTAAGTCCATGGTATTTTGCTTTTCATCGTCTTATATCATTATCAGGGGGTGGTTAGTCTATTTTCTTGTTTTGGTGCTCTTGTTTTCGGCAGCTTTCATGTTCCTTACAAGACTAACTAGCCATGGAAAACCAATGACGGAGGTCAAAGTGACATCTCCACCTCCAATGAACACAATGGAGCAGCTCTTAGCTGTTCAAAATGCTATTTCCAAAGTTGAAGAGCTTGTTCAGGATGCAAATATTGTTCTTCTGAAGATTAGAGCTTTATTGTTGGCTTTTCCCTCCCAGGCTACTGATAGAGCTATACTTGCCTTGGTAGTGATGGCTCTGAGCCTTGCATTCGTGCCCACAAGGTTGCTTGTCCTGATGATGTTTCTGGAGGCATTCACGAACCACTCCCCACCAAGGAGAGCAAGCACAGAAAGGTGGACCAGAAGGTTAAGAGAGTGGTGGTTCAGCATTCCTGCAGCTCCAGTAGTCGTGGAGAAGGATAAAGAAGACAAGAAAACAAAATAAAAGATATATATGTATATTCAATGTAATTATGTGCCATGTTTGGCCGATGGGTTGGGGTGGATCACCAACGCTCGTCTTGTACAGTAGCAGCTAGTATTTTTCAATAAAAATGCGAGTTCTCACCTAGAATTAATTGCTTGCCTCGTACTTTGATTATTTCGTATATAGTTTCATCGGGTGATCGGGAATGTTGGACAACACCCCAGGTTTATGTGATTTTAGCTGAATTTCTTAC]
[+] EMBL CB622500 [ TGCTTGGCAACTGATCCGGCGCTCCACCATTCAACCGACCCCTGTTGAGGTAAGGTGAGGTGAGGTGAGGTG AGGATGGCGATGATGAACCGGACGCGGGATCTGCTGATGGAGGGGTTCGAGGGCCTCGTGCGGGAGGGCTCCTTCAGCTGGGCCCTCCCCCGCCGCGGGGCTTCGCCGGTGGACGACGCCGATGACCCCGACAGCTCCTCCTCCTCCTCCTCCGGCAAGCAGCCCTCCATCTCCGGCCTCTCCCCCAAGGCCAACGCCGTCGTCTCTCGCTGCTCCCGGGTACTTGGTACTTCCACGGATGAGCTGCAATATGACTTTGATATACAAGCATCTGATTCCATAAAGCAGCCAAGAAATTATGCAAGAAATTTTTTGGAATATTGTTGTTTGAGGGCACTTGCACATGCCTCACAAGTTGCAGGGTATCTTTCTGACAAAAGCTTTCGTCGCCTAAATTTTGATATGATGCTAGCTTGGGAAGTTCCCTCTTCTTCAAGCGAGCTCACTGTTAAGGTTGAAGTAGACAACACAGTCAGTTTAGAGGCTTTTTCAAGAATAGCACCTGCAATTCCAACAATCACTGATGTGGTAACATGTTCAAATCTATTTGATGTACTTTCATCTTCAAGTGGAGGCCGGCTTACATTTCCTGTATATGATAAGTACCTTACAGGATTGGACAGAGCAATTAAGAAAATGAAAGGACAATCTGAGTCCTCGCTTTTATCTGCCCAGCGGTCTCACAGAGGAGAAAGGATTGTAGAAGTAGATGGAACATTGACGACTCAACCAGTACTTGAACATGTTGGGATTTCGACATGGCCAGGAAAGGTAACACTTACT ]
[+] EMBL CB622554 [ TGCTTGGCCTTTGATCCGGCGCTCCACCATTCAACCGACCCCTGTTGAGGTAAGGTGAGGTGAGGTGAGGTG AGGATGGCGATGATGAACCGGACGCGGGATCTGCTGATGGAGGGGTTCGAGGGCCTCGTGCGGGAGGGCTCCTTCAGCTGGGCCCTCCCCCGCCGCGGGGCTTCGCCGGTGGACGACGCCGATGACCCCGACAGCTCCTCCTCCTCCTCCTCCGGCAAGCAGCCCTCCATCTCCGGCCTCTCCCCCAAGGCCAACGCCGTCGTCTCTCGCTGCTCCCGGGTACTTGGTACTTCCACGGATGAGCTGCAATATGACTTTGATATACAAGCATCTGATTCCATAAAGCAGCCAAGAAATTATGCAAGAAATTTTTTGGAATATTGTTGTTTGAGGGCACTTGCACATGCCTCACAAGTTGCAGGGTATCTTTCTGACAAAAGCTTTCGTCGCCTAAATTTTGATATGATGCTAGCTTGGGAAGTTCCCTCTTCTTCAAGCGAGCTCACTGTTAAGGTTGAAGTAGACAACACAGTCAGTTTAGAGGCTTTTTCAAGAATAGCACCTGCAATTCCAACAATCACTGATGTGGTAACATGTTCAAATCTATTTGATGTACTTTCATCTTCAAGTGGAGGCCGGCTTACATTTCCTGTATATGATAAGTACCTTACAGGATTGGACAGAGCAATTAAGAAAATGAAAGGACAATCTGAGTCCTCGCTTTTATCTGCCCAGCGGTCTCAGAGAGGAGAAAGGATTGTAGAAGTAGATGGAACATTGACGACTGCACCAGTACTTGAACATGTTGGGATT ]
[+] EMBL CF306637 [ TCAGCTGGGCCCTCCCCCGCCGCGGGGCTTCGCCGGTGGACGACGCCGATGACCCCGACAGCTCCTCCTCCTCCTCCTCCGGCAAGCAGCCCTCCATCTCCGGCCTCTCCCCCAAGGCCAACGCCGTCGTCTCTCGCTGCTCCCGGGTACTTGGTACTTCCACGGATGAGCTGCAGTATGACTTTGATATGCAAGCATCTGATTCCATAAAGCAGCCAAGAAATTATGCAAGAAATTTTTTGGAATATTGTTGTTTGAGGGCACTTGCACATGCCTCACAAGTTGCAGGGTATCTTTCTGACAAAAGCTTTCGTCGCCTAAATTTTGATATGATGCTAGCTTGGGAAGTTCCCTCTTCTTCAAGCGAGCTCACTGTTAAGGTTGAAGTAGACAACACAGTCAGTTTAGAGGCTTTTTCAAGAATAGCACCTGCAATTCCAACAATCACTGATGTGGTAACATGTTCAAATCTATTTGATGTACTTTCATCTTCAAGTGGAGGCCGGCTTACATTTCCTGTATATGATAAGTACCTTACAGGATTGGACAGAGCAATTAAGAAAATGAAAGGACAATCTGAGTCCTCGCTTTTATCTGCC ]
[+] EMBL CB635380 [ TGACCCTTACAGCTCCTCCTCCTCCTCCTCCGGCAAGCAGCCCTCCATCTCCGGCCTCTCCCCCAAGGCCAACGCCGTCGTCTCTCGCTGCTCCCGGGTACTTGGTACTTCCACGGATGAGCTGCAATATGACTTTGATATACAAGCATCTGATTCCATAAAGCAGCCAAGAAATTATGCAAGAAATTTTTTGGAATATTGTTGTTTGAGGGCACTTGCACATGCCTCACAAGTTGCAGGGTATCTTTCTGACAAAAGCTTTCGTCGCCTAAATTTTGATATGATGCTAGCTTGGGAAGTTCCCTCTTCTTCAAGCGAGCTCACTGTTAAGGTTGAAGTAGACAACACAGTCAGTTTAGAGGCTTTTTCAAGAATAGCACCTGCAATTCCAACAATCACTGATGTGGTAACATGTTCAAATCTATTTGATGTACTTTCATCTTCAAGTGGAGGCCGGCTTACATTTCCTGTATATGATAAGTACCTTACAGGATTGGACAGAGCAATTAAGAAAATGAAAGGACAATCTGAGTCCTCGCTTTTATCTGCCCAGCGGTCTCAGAGAGGAGAAAGGATTGTAGAAGTAGATGGAACATTGACGACTCAACCAGTACTTGAACATGTTGGGATTTCGACATGGCCAGGAAGGTTAACACTTACTGATCATGCTCTTTACTTCGAAGCACTTCGGGTTGTGACCTATGATAAGCCTAAAGCTTATGAGCTTGCCGAAGATCTAAAGCAGTCTGTTAAACCTGAGCTGACTGGTCCATGGGGCTCACGGCTATTTGACAAAG ]
[+] EMBL CB676191 [ CCTCCTCCTCCTCCTCCGGCAAGCAGCCCTCCATCTCCGGCCTCTCCCCCAAGGCCAACGCCGTCGTCTCTCGCTGCTCCCGGGTACTTGGTACTTCCACGGATGAGCTGCAGTATGACTTTGATATGCAAGCATCTGATTCCATAAAGCAGCCAAGAAATTATGCAAGAAATTTTTTGGAATATTGTTGTTTGAGGGCACTTGCACATGCCTCACAAGTTGCAGGGTATCTTTCTGACAAAAGCTTTCGTCGCCTAAATTTTGATATGATGCTAGCTTGGGAAGTTCCCTCTTCTTCAAGCGAGCTCACTGTTAAGGTTGAAGTAGACAACACAGTCAGTTTAGAGGCTTTTTCAAGAATAGCACCTGCAATTCCAACAATCACTGATGTGGTAACATGTTCAAATCTATTTGATGTACTTTCATCTTCAAGTGGAGGCCGGCTTACATTTCCTGTATATGATAAGTACCTTACAGGATTGGACAGAGCAATTAAGAAAATGAAAGGACAATCTGAGTCCTCGCTTTTATCTGCCCAGCGGTCTCAGAGAGGAGAAAGGATTGTAGAAGTAGATGGAACATTGACGACTCAACCAGTACTTGAACATGTTGGGATTTCGACATGGCCAGGAAGGTTAACACTTACTGATCATGCTCTTTACTTCGAAGCACTTCGGGTTGTGACCTATGATAAGCCTAAAGCTTATGAGCTTGCCGAAGATCTAAAGCAGTCTGTTAAACCTGAGCTGACTGGTCCATGGGGCT ]
[+] EMBL CF305003 [ TTCCACGGATGAGCTGCAGTATGACTTTGATATGCAAGCATCTGATTCCATAAAGCAGCCAAGAAATTATGCAAGAAATTTTTTGGAATATTGTTGTTTGAGGGCACTTGCACATGCCTCACAAGTTGCAGGGTATCTTTCTGACAAAAGCTTTCGTCGCCTAAATTTTGATATGATGCTAGCTTGGGAAGTTCCCTCTTCTTCAAGCGAGCTCACTGTTAAGGTTGAAGTAGACAACACAGTCAGTTTAGAGGCTTTTTCAAGAATAGCACCTGCAATTCCAACAATCACTGATGTGGTAACATGTTCAAATCTATTTGATGTACTTTCATCTTCAAGTGGAGGCCGGCTTACATTTCCTGTATATGATAAGTACCTTACAGGATTGGACAGAGCAATTAAGAAAATGAAAGGACAATCTGAGTCCTCGCTTTTATCTGCCCAGCGGTCTCAGAGAGGAGAAAGGATTGTAGAAGTAGATGGAACATTGACGACTCAACCAGTACTTGAACATGTTGGGATTTCGACATGGCCAGGAAGGTTAACACTTACTGATCAT ]
[-] EMBL CB622555 [ AGTTAATGAGTCAATGAACAACTATAAGAAGGTTGAATTGGCCCAAGCCACAGTTGATGGAGTCAAAGTTGATGGCCTGGATACAAACTTGGCAGTGATGAAGGAATTGCTATCTCCCGTAAGTGAGCTATGGAGGTTTTTGGTGTTGCTGGCATCTTGGGATGAGCCAATTAAGTCCATGGTATTTTGCTTTTCATCGTCTTATATCATTATCAGGGGGTGGTTAGTCTATTTTCTTGTTTTGGTGCTCTTGTTTTCGGCAGCTTTCATGTTCCTTACAAGACTAACTAGCCATGGAAAACCAATGACGGAGGTCAAAGTGACATCTCCACCTCCAATGAACACAATGGAGCAGCTCTTAGCTGTTCAAAATGCTATTTCCAAAGTTGAAGAGCTTGTTCAGGATGCAAATATTGTTCTTCTGAAGATTAGAGCTTTATTGTTGGCTTTTCCCTCCCAGGCTACTGATAGAGCTATACTTGCCTTGGTAGTGATGGCTCTGAGCCTTGCATTCGTGCCCACAAGGTTGCTTGTCTTGATGATGTTTCTGGAGGCATTCACGAACCACTCCCCACCAAGGAGAGCAAGCACAGAAAGGTGGACCAGAAGGTTAAGAGAGTGGTGGTTCAGCATTCCTGCAGCTCCAGTAGTCGTGGAGAAGGATAAAGAAGACAAGAAAACAAAATAAAAGATATATATGTATATTCAATGTAATTATGTGCCATGTTTGGCCGATGGGTTGGGGTGGATCACCAACGCTCGTCTTGTACAGTAGCAGGTAGTATTTTTCAATAAAAATGCGAGTTCTCAC ]
[-] EMBL CB636137 [ AAAACCAATGACGGAGGTCAAAGTGACATCTCCACCTCCAATGAACACAATGGAGCAGCTCTTAGCTGTTCAAAATGCTATTTCCAAAGTTGAAGAGCTTGTTCAGGATGCAAATATTGTTCTTCTGAAGATTAGAGCTTTATTGTTGGCTTTTCCCTCCCAGGCTACTGATAGAGCTATACTTGCCTTGGTAGTGATGGCTCTGAGCCTTGCATTCGTGCCCACAAGGTTGCTTGTCCTGATGATGTTTCTGGAGGCATTCACGAACCACTCCCCACCAAGGAGAGCAAGCACAGAAAGGTGGACCAGAAGGTTAAGAGAGTGGTGGTTCAGCATTCCTGCAGCTCCAGTAGTCGTGGAGAAGGATAAAGAAGACAAGAAAACAAAATAAAAGATATATATGTATATTCAATGTAATTATGTGCCATGTTTGGCCGATGGGTTGGGGTGGATCACCAACGCTCGTTTTGTACAGTAGCAGCTAGT TTTTTCAATAAAAATGCGAGTT ]
consensusID : consensus_14122#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 843 fasta sequence
[TTAATGAGTCAATGAACAACTATAAGAAGGTTGAATTGGCCCAAGCCACAGTTGATGGAGTCAAAGTTGATGGCCTGGATACAAACTTGGCAGTGATGAAGGAATTGCTATCTCCCGTAAGTGAGCTATGGAGGTTTTTGGTGTTGCTGGCATCTTGGGATGAGCCAATTAAGTCCATGGTATTTTGCTTTTCATCGTCTTATATCATTATCAGGGGGTGGTTAGTCTATTTTCTTGTTTTGGTGCTCTTGTTTTCGGCAGCTTTCATGTTCCTTACAAGACTAACTAGCCATGGAAAACCAATG-ACGGAGGTCAAAGTGACATCT-CCACCTCCAATGAACACAATGGAGCAGCTCTTAGCTGTTCAAAATGCT-ATTTCCAAAGTTGAAGAGCTTGTTCAGGATGCAAATATTGTTCTTCTGAAGATTAGAGCTTTATTGTTGGCTTTTCCCTCCCAGGCTACTGATAGAGCTATACTTGCCTTGGTAGTGATGGCTCTGAGCCTTGCATTCGTGCCCACAAGGTTGCTTGTCCTGATGATGTTTCTGGAGGCATTCACGAACCACTCCCCACCAAGGAGAGCAAGCACAGAAAGGTGGACCAGAAGGTTAAGAGAGTGGTGGTTCAGCATTCCTGCAGCTCCAGTAGTCGTGGAGAAGGATAAAGAAGACA-AGAAAACAAAATAAAAGATATATATGTATATTCAATGTAATTATGTGCCATGTTTGGCCGATGGGTTGGGGTGGATCACCAACGCTCGTCTTGTACAGTAGCAGCTAGTATGTTTCAATAAAAATGCGAGTTCTCCCCTAAAAAAATAAAAAGAAAAAAAAAAAAAAAAAA]
[-] EMBL CB669261 [TTAATGAGTCAATGAACAACTATAAGAAGGTTGAATTGGCCCAAGCCACAGTTGATGGAGTCAAAGTTGATGGCCTGGATACAAACTTGGCAGTGATGAAGGAATTGCTATCTCCCGTAAGTGAGCTATGGAGGTTTTTGGTGTTGCTGGCATCTTGGGATGAGCCAATTAAGTCCATGGTATTTTGCTTTTCATCGTCTTATATCATTATCAGGGGGTGGTTAGTCTATTTTCTTGTTTTGGTGCTCTTGTTTTCGGCAGCTTTCATGTTCCTTACAAGACTAACTAGCCATGGAAAACCAATG ACGGAGGTCAAAGTGACATCT CCACCTCCAATGAACACAATGGAGCAGCTCTTAGCTGTTCAAAATGCT ATTTCCAAAGTTGAAGAGCTTGTTCAGGATGCAAATATTGTTCTTCTGAAGATTAGAGCTTTATTGTTGGCTTTTCCCTCCCAGGCTACTGATAGAGCTATACTTGCCTTGGTAGTGATGGCTCTGAGCCTTGCATTCGTGCCCACAAGGTTGCTTGTCCTGATGATGTTTCTGGAGGCATTCACGAACCACTCCCCACCAAGGAGAGCAAGCACAGAAAGGTGGACCAGAAGGTTAAGAGAGTGGTGGTTCAGCATTCCTGCAGCTCCAGTAGTCGTGGAGAAGGATAAAGAAGACA AGAAAACAAAATAAAAGATATATATGTATATTCAATGTAATTATGTGCCATGTTTGGCCGATGGGTTGGGGTGGATCACCAACGCTCGTCTTGTACAGTAGCAGCTAGTATGTTTCAATAAAAATGCGAGTTCTCCCCTAAAAAAATAAAAAGA ]
[-] EMBL CB676192 [ GATGGCCTGGATACAAACTTGGCAGTGATGAAGGAATTGCTATCTCCCGTAAGTGAGCTATGGAGGTTTTTGGTGTTGCTGGCATCTTGGGATGAGCCAATTAAGTCCATGGTATTTTGCTTTTCATCGTCTTATATCATTATCAGGGGGTGGTTAGTCTATTTTCTTGTTTTGGTGCTCTTGTTTTCGGCAGCTTTCATGTTCCTTACAAGACTAACTAGCCATGGAAAACCAATG ACGGAGGTCAAAGTGACATCT CCACCTCCAATGAACACAATGGAGCAGCTCTTAGCTGTTCAAAATGCT ATTTCCAAAGTTGAAGAGCTTGTTCAGGATGCAAATATTGTTCTTCTGAAGATTAGAGCTTTATTGTTGGCTTTTCCCTCCCAGGCTACTGATAGAGCTATACTTGCCTTGGTAGTGATGGCTCTGAGCCTTGCATTCGTGCCCACAAGGTTGCTTGTCCTGATGATGTTTCTGGAGGCATTCACGAACCACTCCCCACCAAGGAGAGCAAGCACAGAAAGGTGGACCAGAAGGTTAAGAGAGTGGTGGTTCAGCATTCCTGCAGCTCCAGTAGTCGTGGAGAAGGATAAAGAAGACA AGAAAACAAAATAAAAGATATATATGTATATTCAATGTAATTATGTGCCATGTTTGGCCGATGGGTTGGGGTGGATCACCAACGCTCGTCTTGTACAGTAGCAGCTAGTA GTTTCAATAAAAATGCGAG ]
[+] EMBL BI796139 [ AAAAC ATGTCCGGAGGTCAAAGTGACATCTGCCACCTCCAATGAACACAATGGACAAGCTCTTAGCTGTTCAAAATGCTGATTTCCCAAGTTGAAGAGCTTGTTCAGGATGC AATATTGTTCTTCTGAAGATTAGAGCTTTATTGTTGGCTTTTCCCTCCCAGGCTACTGATAGAGCTATACTTGCCTTGGTAGTGATGGCTCTGA CCTTGCATTCGTGCCCACAA GTTGCTTGTCCTGATGATGTTTCTGGAGGCATTCACGAACCACTCCCCACCAAGGAGAGCAAGCACAGAAAGGTGGACCAGAAGGTTAAGAGAGTGGTGGTTCAGCATTCCTGCAGCTCCAGTAGTCGTGGAGAAGGATAAAGAAGACACAGAAAACCAAAT AAAGATATATATGTATATTC ATGTAATTATGTGCCATGTTTGGCCGATGGGTTGGGGTGGATCACC ACGCTCGTCTTGTAC GTA ]
[+] EMBL CF328883 [ GTGCCATGTTTGGCCGATGGGTTGGGGTGGATCACCAACGCTCGTCTTGTACAGTAGCAGCTAGTATTTTTCAATAAAAATGCGAGTTCTCACCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_14122#0 GGGCTAGAGAACCCTCCACCCCAAATAGCCACAGCCAAGAAACATCTAGGGTTGGAGGGA 60
consensus_14122#1 ------------------------------------------------------------
consensus_14122#0 GTCCAGTCCACCACCACCAGGCGCGCCTCCAGTGCTCCCTGCTGTCCACGCCGGCGCCGC 120
consensus_14122#1 ------------------------------------------------------------
consensus_14122#0 GCCTCCCCACCGTCCCCGCCGCCGTCCGCTCCGTCCCCACCGTCCAAGCCGCCAAGCCGG 180
consensus_14122#1 ------------------------------------------------------------
consensus_14122#0 GGGCCGCGACGGAGCGACTCCTCGGGTCGCCGCCTCGCCGGTTGCGGGTTGCCGGCTTGG 240
consensus_14122#1 ------------------------------------------------------------
consensus_14122#0 TGGCTTGGCGCGGCGCCTTCTCCAGTTCTCTTGCTTGGCAACTGATCCGGCGCTCCACCA 300
consensus_14122#1 ------------------------------------------------------------
consensus_14122#0 TTCAACCGACCCCTGTTGAGGTAAGGTGAGGTGAGGTGAGGTGAGGATGGCGATGATGAA 360
consensus_14122#1 ------------------------------------------------------------
consensus_14122#0 CCGGACGCGGGATCTGCTGATGGAGGGGTTCGAGGGCCTCGTGCGGGAGGGCTCCTTCAG 420
consensus_14122#1 ------------------------------------------------------------
consensus_14122#0 CTGGGCCCTCCCCCGCCGCGGGGCTTCGCCGGTGGACGACGCCGATGACCCCGACAGCTC 480
consensus_14122#1 ------------------------------------------------------------
consensus_14122#0 CTCCTCCTCCTCCTCCGGCAAGCAGCCCTCCATCTCCGGCCTCTCCCCCAAGGCCAACGC 540
consensus_14122#1 ------------------------------------------------------------
consensus_14122#0 CGTCGTCTCTCGCTGCTCCCGGGTACTTGGTACTTCCACGGATGAGCTGCAGTATGACTT 600
consensus_14122#1 ------------------------------------------------------------
consensus_14122#0 TGATATGCAAGCATCTGATTCCATAAAGCAGCCAAGAAATTATGCAAGAAATTTTTTGGA 660
consensus_14122#1 ------------------------------------------------------------
consensus_14122#0 ATATTGTTGTTTGAGGGCACTTGCACATGCCTCACAAGTTGCAGGGTATCTTTCTGACAA 720
consensus_14122#1 ------------------------------------------------------------
consensus_14122#0 AAGCTTTCGTCGCCTAAATTTTGATATGATGCTAGCTTGGGAAGTTCCCTCTTCTTCAAG 780
consensus_14122#1 ------------------------------------------------------------
consensus_14122#0 CGAGCTCACTGTTAAGGTTGAAGTAGACAACACAGTCAGTTTAGAGGCTTTTTCAAGAAT 840
consensus_14122#1 ------------------------------------------------------------
consensus_14122#0 AGCACCTGCAATTCCAACAATCACTGATGTGGTAACATGTTCAAATCTATTTGATGTACT 900
consensus_14122#1 ------------------------------------------------------------
consensus_14122#0 TTCATCTTCAAGTGGAGGCCGGCTTACATTTCCTGTATATGATAAGTACCTTACAGGATT 960
consensus_14122#1 ------------------------------------------------------------
consensus_14122#0 GGACAGAGCAATTAAGAAAATGAAAGGACAATCTGAGTCCTCGCTTTTATCTGCCCAGCG 1020
consensus_14122#1 ------------------------------------------------------------
consensus_14122#0 GTCTCAGAGAGGAGAAAGGATTGTAGAAGTAGATGGAACATTGACGACTCAACCAGTACT 1080
consensus_14122#1 ------------------------------------------------------------
consensus_14122#0 TGAACATGTTGGGATTTCGACATGGCCAGGAAGGTTAACACTTACTGATCATGCTCTTTA 1140
consensus_14122#1 ------------------------------------------------------------
consensus_14122#0 CTTCGAAGCACTTCGGGTTGTGACCTATGATAAGCCTAAAGCTTATGAGCTTGCCGAAGA 1200
consensus_14122#1 ------------------------------------------------------------
consensus_14122#0 TCTAAAGCAGTCTGTTAAACCTGAGCTGACTGGTCCATGGGGCTCACGGCTATTTGACAA 1260
consensus_14122#1 ------------------------------------------------------------
consensus_14122#0 AGCTGTTATGTATAAATCAACAACTTTAACAGAACCAGTGATCATAGAATTTCCAGAGTT 1320
consensus_14122#1 ------------------------------------------------------------
consensus_14122#0 GGCTGGCCACTTTCGTCGTGACTATTGGCTGGCCATCATATCAGAAATTCTCTATGTCCA 1380
consensus_14122#1 ------------------------------------------------------------
consensus_14122#0 CAGATTTGTTAGGAAGTTTGACATAAGTGGAGTTGACAAAGAGGAAACAATTTTGAAGGC 1440
consensus_14122#1 ------------------------------------------------------------
consensus_14122#0 TGTACTAAGCATTATGCGGCTACAAGCTATTGAAGAGTTAGCCATTCCAGTTTCTAATCG 1500
consensus_14122#1 ------------------------------------------------------------
consensus_14122#0 ATTCGAGTCTCTTTTGATGTTTAATCTATGTGACAAACTTCCCGGAGGTGATGTAATACT 1560
consensus_14122#1 ------------------------------------------------------------
consensus_14122#0 TGAAACACTAGCTGGTTCTATATCATCGAGAAGATCAACTCAAGTTAACCAACCTGGCAC 1620
consensus_14122#1 ------------------------------------------------------------
consensus_14122#0 TAGCAGTGGAAGGCATTCAATGTCCCCCTTTACTGTTCTGTCGAATCTTGGAGTGGTATC 1680
consensus_14122#1 ------------------------------------------------------------
consensus_14122#0 ACCAATTAATAAAGGTGAGAGACTCTTTGTTGGCGAGATAGTTGTTGGGGAAATGAGTGC 1740
consensus_14122#1 ------------------------------------------------------------
consensus_14122#0 CTTGCAGAAGGTAGTTAATGAGTCAATGAACAACTATAAGAAGGTTGAATTGGCCCAAGC 1800
consensus_14122#1 --------------TTAATGAGTCAATGAACAACTATAAGAAGGTTGAATTGGCCCAAGC 46
**********************************************
consensus_14122#0 CACAGTTGATGGAGTCAAAGTTGATGGCCTGGATACAAACTTGGCAGTGATGAAGGAATT 1860
consensus_14122#1 CACAGTTGATGGAGTCAAAGTTGATGGCCTGGATACAAACTTGGCAGTGATGAAGGAATT 106
************************************************************
consensus_14122#0 GCTATCTCCCGTAAGTGAGCTATGGAGGTTTTTGGTGTTGCTGGCATCTTGGGATGAGCC 1920
consensus_14122#1 GCTATCTCCCGTAAGTGAGCTATGGAGGTTTTTGGTGTTGCTGGCATCTTGGGATGAGCC 166
************************************************************
consensus_14122#0 AATTAAGTCCATGGTATTTTGCTTTTCATCGTCTTATATCATTATCAGGGGGTGGTTAGT 1980
consensus_14122#1 AATTAAGTCCATGGTATTTTGCTTTTCATCGTCTTATATCATTATCAGGGGGTGGTTAGT 226
************************************************************
consensus_14122#0 CTATTTTCTTGTTTTGGTGCTCTTGTTTTCGGCAGCTTTCATGTTCCTTACAAGACTAAC 2040
consensus_14122#1 CTATTTTCTTGTTTTGGTGCTCTTGTTTTCGGCAGCTTTCATGTTCCTTACAAGACTAAC 286
************************************************************
consensus_14122#0 TAGCCATGGAAAACCAATGACGGAGGTCAAAGTGACATCTCCACCTCCAATGAACACAAT 2100
consensus_14122#1 TAGCCATGGAAAACCAATGACGGAGGTCAAAGTGACATCTCCACCTCCAATGAACACAAT 346
************************************************************
consensus_14122#0 GGAGCAGCTCTTAGCTGTTCAAAATGCTATTTCCAAAGTTGAAGAGCTTGTTCAGGATGC 2160
consensus_14122#1 GGAGCAGCTCTTAGCTGTTCAAAATGCTATTTCCAAAGTTGAAGAGCTTGTTCAGGATGC 406
************************************************************
consensus_14122#0 AAATATTGTTCTTCTGAAGATTAGAGCTTTATTGTTGGCTTTTCCCTCCCAGGCTACTGA 2220
consensus_14122#1 AAATATTGTTCTTCTGAAGATTAGAGCTTTATTGTTGGCTTTTCCCTCCCAGGCTACTGA 466
************************************************************
consensus_14122#0 TAGAGCTATACTTGCCTTGGTAGTGATGGCTCTGAGCCTTGCATTCGTGCCCACAAGGTT 2280
consensus_14122#1 TAGAGCTATACTTGCCTTGGTAGTGATGGCTCTGAGCCTTGCATTCGTGCCCACAAGGTT 526
************************************************************
consensus_14122#0 GCTTGTCCTGATGATGTTTCTGGAGGCATTCACGAACCACTCCCCACCAAGGAGAGCAAG 2340
consensus_14122#1 GCTTGTCCTGATGATGTTTCTGGAGGCATTCACGAACCACTCCCCACCAAGGAGAGCAAG 586
************************************************************
consensus_14122#0 CACAGAAAGGTGGACCAGAAGGTTAAGAGAGTGGTGGTTCAGCATTCCTGCAGCTCCAGT 2400
consensus_14122#1 CACAGAAAGGTGGACCAGAAGGTTAAGAGAGTGGTGGTTCAGCATTCCTGCAGCTCCAGT 646
************************************************************
consensus_14122#0 AGTCGTGGAGAAGGATAAAGAAGACAAGAAAACAAAATAAAAGATATATATGTATATTCA 2460
consensus_14122#1 AGTCGTGGAGAAGGATAAAGAAGACAAGAAAACAAAATAAAAGATATATATGTATATTCA 706
************************************************************
consensus_14122#0 ATGTAATTATGTGCCATGTTTGGCCGATGGGTTGGGGTGGATCACCAACGCTCGTCTTGT 2520
consensus_14122#1 ATGTAATTATGTGCCATGTTTGGCCGATGGGTTGGGGTGGATCACCAACGCTCGTCTTGT 766
************************************************************
consensus_14122#0 ACAGTAGCAGCTAGTATTTTTCAATAAAAATGCGAGTTCTCACCTAGAATTAATTGCTTG 2580
consensus_14122#1 ACAGTAGCAGCTAGTATGTTTCAATAAAAATGCGAGTTCTCCCCTAAAAA-AATAAAAAG 825
***************** *********************** **** ** *** *
consensus_14122#0 CCTCGTACTTTGATTATTTCGTATATAGTTTCATCGGGTGATCGGGAATGTTGGACAACA 2640
consensus_14122#1 AAAAAAAAAAAAAAAAAA------------------------------------------ 843
* * *
consensus_14122#0 CCCCAGGTTTATGTGATTTTAGCTGAATTTCTTAC 2675
consensus_14122#1 -----------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||