These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14125#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 1476 fasta sequence [GGTCGATCCGTCGCGGGGGACCATCTCTCGGCATCGATCGATCGCCGCCGGTGTCGGCGGCGAGGGGCGGCGCGGGGATGGCGAGCGGCAACAGCGGCGAGCCGAGCACGGCGCCGCAGCCGAATCGGTGGTACGAGCTCCGGCTGGGCTCCTCCTGCCGCGACCCCTCCCCCACCGCCAAGTTCTGCACGCTCCGCTATGAATTTAAGCCAGCATCAATTGATAAGACTCAAGCTGGGTCTCTGCAGAAGACCAAAGATAACAGGGTTACTGTGGAATTCCACAACAATCAGCCTGGCAAGCCAAAGGTGACATTTGAAGGAAGCCAAGAAGAGTACAAGGATAATGATGGTGTCTTGTTTTTTGATGGTGAAACCTTTCGTCTGGAGCGGTTGCATCGGGCTGTCAAGAGATTAAGGCATGTCCGAGTTCCAGGAGAGTCTTCGGCAGCCACTTCGGCTACTACTGGAATGGGCGAATCACATTCCCCTCCATTACCGAAAGTTGGAAAGTCACCGGCCATGAGTAAACCTGCTGTACACTCAGTTCCTGTTGAGGTTGAACGCATTGACATTGGTGAACCTGAAAATC------CAGGTCTAAGAAACAATAACAGGAGCACTACATACCAACCTGTTACCACAAATCCATTTTCATTTTCGCCTGATCCAAATGATCAAGAGGAGAACCTAGACATACTTGGTGATGATGACAATGGCTCACCGAATAACATGTCCTCTGGACAAGGAGCTTCTGTTCGTGGTTTTGACATCAACATACCAAACCAGCTTGACATAGATGATGAAATTGCTGATGTAGATGTCAGTGAT-GAGGCTGATGAGGGACTCAATGCAGCCGAGGCCCTGCGAGCTCAAGTCAATGCAGAAGGGCAGCAGGATGAGCAGGAAACCTCTAGCTCTAGCGGGAGCAGCAGCAGCAGTAGTAGCAGTGGAAGTGGGAGTGGTAGTGGAAGCAGCAGCAGTGATAGTGACGGCAGTGATGGTGATTCAGCCAGCTCTGGGGGTGACGTTGATATATAAGTTTGGTGTACAGAGTTTTCTTGCTGTGTATGCCATGGTTCACAATTTTACACCAGTATCAGGAGGTGTAAGCCTTGAATGTTTAACTCATAGTTCACAGGTAACAAAATTAAGTTTCTTCTGTTGTGATCTTATTCTGCTGTAATTTGTTTGTTCTCCTCTTGGTTAGTCTGCTATGTTTCTTAGATCTAGCCTGGAGCATAGCATTTGTATGAAACCTTTGCATGATGGATTTTCTTCCCAAATATGGGATATATTTTCTCTTGTTTTGAAGTACAGAACGGC-ATATATTCTGATATGTAGACATACATAGTGTGCACCATGTTGTGGGTTAGTTGTTTGATGGAAGTATCTGCCCACTTTTTGTATCGTACTTGCTTTGCTTTGCAAATTAAGGCATGGAGCTGTTATTTTTTGACAAGTAAAAAAATAAAAAGGA] [+] EMBL AK102891 [GGTCGATCCGTCGCGGGGGACCATCTCTCGGCATCGATCGATCGCCGCCGGTGTCGGCGGCGAGGGGCGGCGCGGGGATGGCGAGCGGCAACAGCGGCGAGCCGAGCACGGCGCCGCAGCCGAATCGGTGGTACGAGCTCCGGCTGGGCTCCTCCTGCCGCGACCCCTCCCCCACCGCCAAGTTCTGCACGCTCCGCTATGAATTTAAGCCAGCATCAATTGATAAGACTCAAGCTGGGTCTCTGCAGAAGACCAAAGATAACAGGGTTACTGTGGAATTCCACAACAATCAGCCTGGCAAGCCAAAGGTGACATTTGAAGGAAGCCAAGAAGAGTACAAGGATAATGATGGTGTCTTGTTTTTTGATGGTGAAACCTTTCGTCTGGAGCGGTTGCATCGGGCTGTCAAGGGATTAAGGCGTGTCCGAGTTCCAGGAGAGTCTTCGGCAGCCACTTCGGCTACTACTGGAATGGGCGAATCACATTCCCCTCCATTACCGAAAGTTGGAAAGTCACCGGCCATGAGTAAACCTGCTGTACACTCAGTTCCTGTTGAGGTTGAACGCATTGACATTGGTGAACCTGAAAATC CAGGTCTAAGAAACAATAACAGGAGCACTACATACCAACCTGTTACCACAAATCCATTTTCATTTTCGCCTGATCCAAATGATCAAGAGGAGAACCTAGACATACTTGGTGATGATGACAATGGCTCACCGAATAACATGTCCTCTGGACAAGGAGCTTCTGTTCGTGGTTTTGACATCAACATACCAAACCAGCTTGACATAGATGATGAAATTGCTGATGTAGATGTCAGTGAT GAGGCTGATGAGGGACTCAATGCAGCCGAGGCCCTGCGAGCTCAAGTCAATGCAGAAGGGCAGCAGGATGAGCAGGAAACCTCTAGCTCTAGCGGGAGCAGCAGCAGCAGTAGTAGCAGTGGAAGTGGGAGTGGTAGTGGAAGCAGCAGCAGTGATAGTGACGGCAGTGATGGTGATTCAGCCAGCTCTGGGGGTGACGTTGATATATAAGTTTGGTGTACAGAGTTTTCTTGCTGTGTATGCCATGGTTCACAATTTTACACCAGTATCAGGAGGTGTAAGCCTTGAATGTTTAACTCATAGTTCACAGGTAACAAAATTAAGTTTCTTCTGTTGTGATCTTATTCTGCTGTAATTTGTTTGTTCTCCTCTTGGTTAGTCTGCTATGTTTCTTAGATCTAGCCTGGAGCATAGCATTTGTATGAAACCTTTGCATGATGGATTTTCTTCCCAAATATGGGATATATTTTCTCTTGTTTTGAAGTACAGAACGGC ATATATTCTGATATGTAGACATACATAGTGTGCACCATGTTGTGGGTTAGT ] [+] EMBL AK059119 [GGTCGATCCGTCGCGGGGGACCATCTCTCGGCATCGATCGATCGCCGCCGGTGTCGGCGGCGAGGGGCGGCGCGGGGATGGCGAGCGGCAACAGCGGCGAGCCGAGCACGGCGCCGCAGCCGAATCGGTGGTACGAGCTCCGGCTGGGCTCCTCCTGCCGCGACCCCTCCCCCACCGCCAAGTTCTGCACGCTCCGCTATGAATTTAAGCCAGCATCAATTGATAAGACTCAAGCTGGGTCTCTGCAGAAGACCAAAGATAACAGGGTTACTGTGGAATTCCACAACAATCAGCCTGGCAAGCCAAAGGTGACATTTGAAGGAAGCCAAGAAGAGTACAAGGATAATGATGGTGTCTTGTTTTTTGATGGTGAAACCTTTCGTCTGGAGCGGTTGCATCGGGCTGTCAAGAGATTAAGGCATGTCCGAGTTCCAGGAGAGTCTTCGGCAGCCACTTCGGCTACTACTGGAATGGGCGAATCACATTCCCCTCCATTACCGAAAGTTGGAAAGTCACCGGCCATGAGTAAACCTGCTGTACACTCAGTTCCTGTTGAGGTTGAACGCATTGACATTGGTGAACCTGAAAATC CAGGTCTAAGAAACAATAACAGGAGCACTACATACCAACCTGTTACCACAAATCCATTTTCATTTTCGCCTGATCCAAATGATCAAGAGGAGAACCTAGACATACTTGGTGATGATGACAATGGCTCACCGAATAACATGTCCTCTGGACAAGGAGCTTCTGTTCGTGGTTTTGACATCAACATACCAAACCAGCTTGACATAGATGATGAAATTGCTGATGTAGATGTCAGTGAT GAGGCTGATGAGGGACTCAATGCAGCCGAGGCCCTGCGAGCTCAAGTCAATGCAGAAGGGCAGCAGGATGAGCAGGAAACCTCTAGCTCTAGCGGGAGCAGCAGCAGCAGTAGTAGCAGTGGAAGTGGGAGTGGTAGTGGAAGCAGCAGCAGTGATAGTGACGGCAGTGATGGTGATTCAGCCAGCTCTGGGGGTGACGTTGATATATAAGTTTGGTGTACAGAGTTTTCTTGCTGTGTATGCCATGGTTCACAATTTTACACCAGTATCAGGAGGTGTAAGCCTTGAATGTTTAACTCATAGTTCACAGGTAACAAAATTAAGTTTCTTCTGTTGTGATCTTATTCTGCTGTAATTTGTTTGTTCTCCTCTTGGTTAGTCTGCTATGTTTCTTAGATCTAGCCTGGAGCATAGCATTTGTATGAAACCTTTGCATGATGGATTTTCTTCCCAAATATGGGATATATTTTCTCTTGTTTTGAAGTACAGAACGGC ATATATTCTGATATGTAGACATACAT ] [+] EMBL CB677067 [ TCGCGGGGGACCATCTCTCGGCATCGATCGATCGCCGCCGGTGTCGGCGGCGAGGGGCGGCGCGGGGATGGCGAGCGGCAACAGCGGCGAGCCGAGCACGGCGCCGCAGCCGAATCGGTGGTACGAGCTCCGGCTGGGCTCCTCCTGCCGCGACCCCTCCCCCACCGCCAAGTTCTGCACGCTCCGCTATGAATTTAAGCCAGCATCAATTGATAAGACTCAAGCTGGGTCTCTGCAGAAGACCAAAGATAACAGGGTTACTGTGGAATTCCACAACAATCAGCCTGGCAAGCCAAAGGTGACATTTGAAGGAAGCCAAGAAGAGTACAAGGATAATGATGGTGTCTTGTTTTTTGATGGTGAAACCTTTCGTCTGGAGCGGTTGCATCGGGCTGTCAAGAGATTAAGGCATGTCCGAGTTCCAGGAGAGTCTTCGGCAGCCACTTCGGCTACTACTGGAATGGGCGAATCACATTCCCCTCCATTACCGAAAGTTGGAAAGTCACCGGCCATGAGTAAACCTGCTGTACACTCAGTTCCTGTTGAGGTTGAACGCATTGACATTGGTGAACCTGAAAATC CAGGTCTAAGAAACAATAACAGGAGCACTACATACCAACCTGTTACCACAAATCCATTTTCATTTTCGCCTGATCGCAATGATCAAGAGGAGAACCTAGACATACTTGGTGATGATGACAATGGCTCACCGAATAACATGTCCTCTGGAACAGGAGCTTCTGTTCGTGGTTTTGACATCAACATACCAAACCAGCTTGACATAGATGAAGAA ] [+] EMBL CB678082 [ CGGGCCACCATCTCTCGGCATCGATCGATCGCCGCCGGTGTCGGCGGCGAGGGGCGGCGCGGGGATGGCGAGCGGCAACAGCGGCGAGCCGAGCACGGCGCCGCAGCCGAATCGGTGGTACGAGCTCCGGCTGGGCTCCTCCTGCCGCGACCCCTCCCCCACCGCCAAGTTCTGCACGCTCCGCTATGAATTTAAGCCAGCATCAATTGATAAGACTCAAGCTGGGTCTCTGCAGAAGACCAAAGATAACAGGGTTACTGTGGAATTCCACAACAATCAGCCTGGCAAGCCAAAGGTGACATTTGAAGGAAGCCAACAAGAGTACAAGGATAATGATGGTGTCTTGTTTTTTGATGGTGAAACCTTTCGTCTGGAGCGGTTGCATCGGGCTGTCAAGAGATTAAGGCATGTCCGAGTTCCAGGAGAGTCTTCGGCAGCCACTTCGGCTACTACTGGAATGGGCGAATCACATTCCCCTCCATTACCGAAAGTTGGAAAGTCACCGGCCATGAGTAAACCTGCTGTACACTCAGTTCCTGTTGAGGTTGAACGCATTGACATTGGTGAACCTGAAAATC CAGGTCTAAGAAACTATAACAGGAGCACTACATACCAACCTGTTACCACAAATCCATTTTCATTTTCGCCTGATCCAAATGATCAAGAGGAGAACCTAGACATACTTGGTGATGATGACAATGGCTCACCGAATAACATGTCCTCTGGACAAGGAGCTTCTGTTCGTGGTTTTGACATCCACA ] [+] EMBL CB649899 [ GGACCATCTCTCGGCATCGATCGATCGCCGCCGGTGTCGGCGGCGAGGGGCGGCGCGGGGATGGCGAGCGGCAACAGCGGCGAGCCGAGCACGGCGCCGCAGCCGAATCGGTGGTACGAGCTCCGGCTGGGCTCCTCCTGCCGCGACCCCTCCCCCACCGCCAAGTTCTGCACGCTCCGCTATGAATTTAAGCCAGCATCAATTGATAAGACTCAAGCTGGGTCTCTGCAGAAGACCAAAGATAACAGGGTTACTGTGGAATTCCACAACAATCAGCCTGGCAAGCCAAAGGTGACATTTGAAGGAAGCCAAGAAGAGTACAAGGATAATGATGGTGTCTTGTTTTTTGATGGTGAAACCTTTCGTCTGGAGCGGTTGCATCGGGCTGTCAAGAGATTAAGGCATGTCCGAGTTCCAGGAGAGTCTTCGGCAGCCACTTCGGCTACTACTGGAATGGGCGAATCACATTCCCCTCCATTACCGAAAGTTGGAAAGTCACCGGCCATGAGTAAACCTGCTGTACACTCAGTTCCTGTTGAGGTTGAACGCATTGACATTGGTGAACCTGAAAATC CAGGTCTAAGAAACAATAACAGGAGCACTACATACCAACCTGTTACCACAAATCCATTTTCATTTTCGCCTGATCCAAATGATCAAGAGGAGAACCTAGACATACTTGGTGATGATGACAATGGCTCACCGAATAACATGTCCTCTGGACAAGGAGCTTCTGTTCGTGGTTTTGACA ] [+] EMBL CB681857 [ GAATTTAAGCCAGCATCAATTGATAAGACTCAAGCTGGGTCTCTGCAGAAGACCAAAGATAACAGGGTTACTGTGGAATTCCACAACAATCAGCCTGGCAAGCCAAAGGTGACATTTGAAGGAAGCCAAGAAGAGTACAAGGATAATGATGGTGTCTTGTTTTTTGATGGTGAAACCTTTCGTCTGGAGCGGTTGCATCGGGCTGTCAAGAGATTAAGGCATGTCCGAGTTCCAGGAGAGTCTTCGGCAGCCACTTCGGCTACTACTGGAATGGGCGAATCACATTCCCCTCCATTACCGAAAGTTGGAAAGTCACCGGCCATGAGTAAACCTGCTGTACACTCAGTTCCTGTTGAGGTTGAACGCATTGACATTGGTGAACCTGAAAATC CAGGTCTAAGAAACAATAACAGGAGCACTACATACCAACCTGTTACCACAAATCCATTTTCATTTTCGCCTGATCCAAATGATCAAGAGGAGAACCTAGACATACTTGGTGATGATGACAATGGCTCACCGAATAACATGTCCTCTGGACAAGGAGCTTCTGTTCGTGGTTTTGACATCAACATACCAAACCAGCTTGACATAGATGATGAAATTGCTGATGTAGATGTCAGTGAT GAGGCTGATGAGGGACTCAATGCAGCCGAGGCCCTGCGAGCTCAAGTCAATGCAGAAGGGCAGCAGGATGAGCAGGAAACCTCTAGCTCTAGCGGGAGCAGCAGCAGCAGTAGTAGCAGTGGAAGTGGGAGTGGTAGTGGAAGCAGCAGCAGTGATAGTGACGGCAGTG ] [+] EMBL AU030594 [ GGGTTACTGTGGAATTCCACAACAATCAGCCTGGCAAGCCAAAGGTGACATTTGAAGGAAGCCAAGAAGAGTACAAGGATAATGATGGTGTCTTGTTTTTTGATGGTGAAA CTTTCGTCTGGAGCGGTTGCATCGGGCTGTCAAGAGATTAAGGCATGTCCGAGTTCCAGGAGAGTCTTCGGCAGCCACTTCGGCTACTACTGGAATGGGCGAATCACATTCCCCTCCATTACCGAAAGTTGGAAAGTCACCGGCCATGAGTAAACCTGCTGTACACTCAGTTCCTGTTGAGGTTGAACGCATTGACATTGGTGAACCTGAAAATCCAGTTGCAGGTCTAAGAAACAATAACAGGAGCACTACATACCAACCTGTTACCAC AATCCATTTTCATTTTCGCCTGATCC AATGATCAAGAG ] [-] EMBL CB649900 [ TTGAGGTTGAACGCATTGACATTGGTGAACCTGAAAATC CAGGTCTAAGAAACAATAACAGGAGCACTACATACCAACCTGTTACCACAAATCCATTTTCATTTTCGCCTGATCCAAATGATCAAGAGGAGAACCTAGACATACTTGGTGATGATGACAATGGCTCACCGAATAACATGTCCTCTGGACAAGGAGCTTCTGTTCGTGGTTTTGACATCAACATACCAAACCAGCTTGACATAGATGATGAAATTGCTGATGTAGATGTCAGTGAT GAGGCTGATGAGGGACTCAATGCAGCCGAGGCCCTGCGAGCTCAAGTCAATGCAGAAGGGCAGCAGGATGAGCAGGAAACCTCTAGCTCTAGCGGGAGCAGCAGCAGCAGTAGTAGCAGTGGAAGTGGGAGTGGTAGTGGAAGCAGCAGCAGTGATAGTGACGGCAGTGATGGTGATTCAGCCAGCTCTGGGGGTGACGTTGATATATAAGTTTGGTGTACAGAGTTTTCTTGCTGTGTATGCCATGGTTCACAATTTTACACCAGTATCAGGAGGTGTAAGCCTTGAATGTTTAACTCATAGTTCACAGGTAACAAAATTAAGTTTCTTCTGTTGTGATCTTATTCTGCTGTAATTTGTTTGTTCTCCTCTTGGTTAGTCTGCTATGTTTCTTAGATCTAGCCTGGAGCATAGCATTTGTATGAAACCTTTGCATGATGGATTTTCTTCCCAAATATGGGATATATTTTCTCTTGTTT ] [+] EMBL AU030595 [ tcCCACAAATCCATTTCCATTTCCNCCTGATCCAAATGATCAAGAGGAGACCCTAGACATACTTGGTGATGATGACAATGGCTCACCGAATAACAT TCCTCTGGACAAGGAGCTCCTGTTCGTGGTTTTGACATCAACATACCAAACCAGCTTGACATAGATGATGAAATTGCTGATGTAGATGTCAGTGAT GAGGCTGATGAGGGACTCAATGCAGCCGAGGCCCTGCGAGCTCAAGTCAATGCAGAAGGGCAGCAGGATGAGCAGGAAACCTCTAGCTCTAGCGGGAGCAGCAGCAGCAGTAGTAGCAGTGGAAGTGGGAGTGGTAGTGGAAGCAGCAGCAGTGATAGTGACGGCAGTGATGGTGATTCAGCCAGCTCTGGGGGTGACGTTGATATATAAGTTTGGTGTACAGAGTTTTCTTGCTGTGTATGCCATGGTTCACAATTTTACACCAGTATCAGGAGGTGTAAGCCTTGAATGTTTAACTCATAGTTCACAGGTAACAAAATTAAGTTTCTTCTGTTGTGATCTTATTCTGCTGTAATTTGTTTGTTCTCCTCTTGGTTAGTCTGCTATGTTTCTTAGATCTAGCCTGGAGCATAGCATTTGTATGAAACCTTTGCATGATGGATTTTCTTCCCAAATATGGGATATAaaaa ] [-] EMBL CB677068 [ TGGCTCACCGAATAACATGTCCTCTGGACAAGGAGCTTCTGTTCGTGGTTTTGACATCAACATACCAAACCAGCTTGACATAGATGATGAAATTGCTGATGTAGATGTCAGTGAT GAGGCTGATGAGGGACTCAATGCAGCCGAGGCCCTGCGAGCTCAAGTCAATGCAGAAGGGCAGCAGGATGAGCAGGAAACCTCTAGCTCTAGCGGGAGCAGCAGCAGCAGTAGTAGCAGTGGAAGTGGGAGTGGTAGTGGAAGCAGCAGCAGTGATAGTGACGGCAGTGATGGTGATTCAGCCAGCTCTGGGGGTGACGTTGATATATAAGTTTGGTGTACAGAGTTTTCTTGCTGTGTATGCCATGGTTCACAATTTTACACCAGTATCAGGAGGTGTAAGCCTTGAATGTTTAACTCATAGTTCACAGGTAACAAAATTAAGTTTCTTCTGTTGTGATCTTATTCTGCTGTAATTTGTTTGTTCTCCTCTTGGTTAGTCTGCTATGTTTCTTAGATCTAGCCTGGAGCATAGCATTTGTATGAAACCTTTGCATGATGGATTTTCTTCCCAAATATGGGATATATTTTCTCTTGTTTTGAAGTACAGAACGGC ATATATTTTGATATGTAGACATACATAGTGTGCACCATGTTGTGGGTTAGTTGTTTGATGGAAGTATCTGCCCACTTTTTGTATCGTACTTGCTTTGCTTTGCAAATTAAGGCATGGAGCTGTTATTTTTTGACAAGTAAAAAAATAAAAAGGA] [+] EMBL BI810595 [ tcCTGATGTAGATGTCAGTGATAGA GCTGATGAGGGACTCAATGCA CCGA GCCCTGCGAGCTCAAGTCAATGCAGAA GGCAGCAGGATGA CAGGAAACCTCTAGCTCTAGCGGGA CAGCAGCA CAGTAGTAGCAGTGGAAGTGGGAGTGGTAGTGGAAGCAGCAGCAGTGATAGTGACGGCAGTGATGGTGATTCAGCCAGCTCTGGGGGTGACGTTGATATATAAGTTTGGTGTACAGAGTTTTCTTGCTGTGTATGCCATGGTTCACAATTTTACACCAGTATCAGGAGGTGTAAGCCTTGAATGTTTAACTCATAGTTCACAGGTAACAAAATTAAGTTTCTTCTGTTGTGATCTTATTCTGCTGTAATTTGTTTGTTCTCCTCTTGGTTAGTCTGCTATGTTTCTTAGATCTAGCCTGGAGCATAGCATTTGTATGAAACCTTTGCATGATGGATTTTCTTCCCAAATATGGGATATATTTTCTCTTGTTTTGAAGTACAGAACGGC ATATATTCTGATAaaaa ] [+] EMBL AU181474 [ TGNCGGCAGTGATGGTGATTCAGCCAGCTCTGGGGGTGACGTTGATATATAAGTTTGGTGTACAGAGTTTTCTTGCTGTGTATGCCATGGTTCNCAATTTTACACCAGTATCAGGAGGTGTAAGCCTTGAATGTTTAACTCATAGTTCACAGGTAACAAAATTAAGTTTCTTCTGTTGTGATCTTATTCTGCTGTAATTTGTTTGTTCTCCTCTTGGTTAGTCTGCTATGTTTCTTAGATCTAGCCTGGAGCATAGCATTTGTATGAAACCTTTGCATGATGGATTTTCTTCCCAAATATGGGATATATTTTCTCTTGTTTTGAAGTACAGAACGGCTATATATTCTGATATGTAGACATACATAGTGTGCNCCATGTTGTGGGTTAGTTGTTTGATGGAAGTATCTGCCCACTTTTTGTATCGTAaaaaaaa ] consensusID : consensus_14125#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 728 fasta sequence [ATTTTCATTTTCGCCTGATCCAAATGATCAAGAGGAGAACCTAGACATACTTGGTGATGATGACAATGGCTCACCGAATAACATGTCCTCTGGACAAGGAGCTTCTGTTCGTGGTTTTGACATCAACATACCAAACCAGCTTGACATAGATGATGAAATTGCTGATGTAGATGTCAGTGATGAGGCTGATGAGGGACTCAATGCAGCCGAGGCCCTGCGAGCTCAAGTCAATGCAGAAGGGCAGCAGGATGAGCAGGAAACCTCTAGCTCTAGCGGGAGCAGCAGCAGCAGTAGTAGCAGTGGAAGTGGGAGTGGTAGTGGAAGCAGCAGCAGTGATAGTGACGGCAGTGATGGTGATTCAGCCAGCTCTGGGGGTGACGTTGATATATAAGTTTGGTGTACAGAGTTTTCTTGCTGTGTATGCCATGGTTCACAATTTTA-CA-CCAGTATCA-GGAGGTGTAAGCCTTGAATGTTTAACTCATAGTTCACAGGTAA-CAAAATTAAGTTTCTTCTGTTGTGATCTTATTCTGCTGTAATTTGTTTGTTCTCCTCTTGGTTAGTCTGCTATGTTTCTTAGATCTAGCCTGGAGCATAGCATTTGTATGAAACCTTTGCATGATGGATTTTCTTCCCAAATATGGGATATATTTTCTCTTGTTTTGAAGTACAGAACGGCATATATTTAGGGATGTAGACATACATAGTGTGCCCCAAAAAAAATTAAAAGG] [-] EMBL CB681858 [ATTTTCATTTTCGCCTGATCCAAATGATCAAGAGGAGAACCTAGACATACTTGGTGATGATGACAATGGCTCACCGAATAACATGTCCTCTGGACAAGGAGCTTCTGTTCGTGGTTTTGACATCAACATACCAAACCAGCTTGACATAGATGATGAAATTGCTGATGTAGATGTCAGTGATGAGGCTGATGAGGGACTCAATGCAGCCGAGGCCCTGCGAGCTCAAGTCAATGCAGAAGGGCAGCAGGATGAGCAGGAAACCTCTAGCTCTAGCGGGAGCAGCAGCAGCAGTAGTAGCAGTGGAAGTGGGAGTGGTAGTGGAAGCAGCAGCAGTGATAGTGACGGCAGTGATGGTGATTCAGCCAGCTCTGGGGGTGACGTTGATATATAAGTTTGGTGTACAGAGTTTTCTTGCTGTGTATGCCATGGTTCACAATTTTA CA CCAGTATCA GGAGGTGTAAGCCTTGAATGTTTAACTCATAGTTCACAGGTAA CAAAATTAAGTTTCTTCTGTTGTGATCTTATTCTGCTGTAATTTGTTTGTTCTCCTCTTGGTTAGTCTGCTATGTTTCTTAGATCTAGCCTGGAGCATAGCATTTGTATGAAACCTTTGCATGATGGATTTTCTTCCCAAATATGGGATATATTTTCTCTTGTTTTGAAGTACAGAACGGCATATATTTAGGGATGTAGACATACATAGTGTGCCCCAAAAAAAATTAAAAGG] [+] EMBL BI810128 [ ccggaGGACTCAAT CA CCGA GCCCTGCGAGCTCAAGTCAATGCAGAA GGCA CAGGATGA CAGGAAACCTCTAGCTCTA CGGGAGCAGCA CA CAGTAGTA CAGTGGAAGTGGGAGTGGTAGTGGAA CA CA CAGTGATAGTGAC GCAGTGATGGTGATTCA CCAGCTCTGGGGGTGACGTTGATATATAAGTTTGGTGTACAGAGTTTTCTTGCTGTGTATCCCATGGTTCACCATTTTACCACCCAGTATCACGGAGGTGTAACCCTTGAATGTTTAACTCATAGTTCACAGGTAACCAAAATTAAGTTTCTTCTGTTGTGATCTTATTCTGCTGTAATTTGTTTGTTCTCCTCTTGGTTAGTCTGCTATGTTTCTTAGATCTAGCCTGGAGCATAGCATTTGTATGAAACCTTTGCATGATGGATTTTCTTCCC AATATGGGATATATTTTCTCTTGTTTTGAAGTAa ] consensusID : consensus_14125#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 160 fasta sequence [GATGGGGATGTCAGCCAGCTCTGGGGGTGACGTTTGATATATAAGTTTGGTGTACAGAGTTTTCTTGCTGGTGTATGCCATGGGTTCACGAGTGTTACACCAGTATCAGGAGGTGTAAGCCTTGAATGTGTTAACTCATAGGTTCACAGGTAGACCAAAT] [+] EMBL BI810169 [GATGGGGATGTCAGCCAGCTCTGGGGGTGACGTTTGATATATAAGTTTGGTGTACAGAGTTTTCTTGCTGGTGTATGCCATGGGTTCACGAGTGTTACACCAGTATCAGGAGGTGTAAGCCTTGAATGTGTTAACTCATAGGTTCACAGGTAGACCAAAT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_14125#0 GGTCGATCCGTCGCGGGGGACCATCTCTCGGCATCGATCGATCGCCGCCGGTGTCGGCGG 60 consensus_14125#1 ------------------------------------------------------------ consensus_14125#2 ------------------------------------------------------------ consensus_14125#0 CGAGGGGCGGCGCGGGGATGGCGAGCGGCAACAGCGGCGAGCCGAGCACGGCGCCGCAGC 120 consensus_14125#1 ------------------------------------------------------------ consensus_14125#2 ------------------------------------------------------------ consensus_14125#0 CGAATCGGTGGTACGAGCTCCGGCTGGGCTCCTCCTGCCGCGACCCCTCCCCCACCGCCA 180 consensus_14125#1 ------------------------------------------------------------ consensus_14125#2 ------------------------------------------------------------ consensus_14125#0 AGTTCTGCACGCTCCGCTATGAATTTAAGCCAGCATCAATTGATAAGACTCAAGCTGGGT 240 consensus_14125#1 ------------------------------------------------------------ consensus_14125#2 ------------------------------------------------------------ consensus_14125#0 CTCTGCAGAAGACCAAAGATAACAGGGTTACTGTGGAATTCCACAACAATCAGCCTGGCA 300 consensus_14125#1 ------------------------------------------------------------ consensus_14125#2 ------------------------------------------------------------ consensus_14125#0 AGCCAAAGGTGACATTTGAAGGAAGCCAAGAAGAGTACAAGGATAATGATGGTGTCTTGT 360 consensus_14125#1 ------------------------------------------------------------ consensus_14125#2 ------------------------------------------------------------ consensus_14125#0 TTTTTGATGGTGAAACCTTTCGTCTGGAGCGGTTGCATCGGGCTGTCAAGAGATTAAGGC 420 consensus_14125#1 ------------------------------------------------------------ consensus_14125#2 ------------------------------------------------------------ consensus_14125#0 ATGTCCGAGTTCCAGGAGAGTCTTCGGCAGCCACTTCGGCTACTACTGGAATGGGCGAAT 480 consensus_14125#1 ------------------------------------------------------------ consensus_14125#2 ------------------------------------------------------------ consensus_14125#0 CACATTCCCCTCCATTACCGAAAGTTGGAAAGTCACCGGCCATGAGTAAACCTGCTGTAC 540 consensus_14125#1 ------------------------------------------------------------ consensus_14125#2 ------------------------------------------------------------ consensus_14125#0 ACTCAGTTCCTGTTGAGGTTGAACGCATTGACATTGGTGAACCTGAAAATCCAGGTCTAA 600 consensus_14125#1 ------------------------------------------------------------ consensus_14125#2 ------------------------------------------------------------ consensus_14125#0 GAAACAATAACAGGAGCACTACATACCAACCTGTTACCACAAATCCATTTTCATTTTCGC 660 consensus_14125#1 ----------------------------------------------ATTTTCATTTTCGC 14 consensus_14125#2 ------------------------------------------------------------ consensus_14125#0 CTGATCCAAATGATCAAGAGGAGAACCTAGACATACTTGGTGATGATGACAATGGCTCAC 720 consensus_14125#1 CTGATCCAAATGATCAAGAGGAGAACCTAGACATACTTGGTGATGATGACAATGGCTCAC 74 consensus_14125#2 ------------------------------------------------------------ consensus_14125#0 CGAATAACATGTCCTCTGGACAAGGAGCTTCTGTTCGTGGTTTTGACATCAACATACCAA 780 consensus_14125#1 CGAATAACATGTCCTCTGGACAAGGAGCTTCTGTTCGTGGTTTTGACATCAACATACCAA 134 consensus_14125#2 ------------------------------------------------------------ consensus_14125#0 ACCAGCTTGACATAGATGATGAAATTGCTGATGTAGATGTCAGTGATGAGGCTGATGAGG 840 consensus_14125#1 ACCAGCTTGACATAGATGATGAAATTGCTGATGTAGATGTCAGTGATGAGGCTGATGAGG 194 consensus_14125#2 ------------------------------------------------------------ consensus_14125#0 GACTCAATGCAGCCGAGGCCCTGCGAGCTCAAGTCAATGCAGAAGGGCAGCAGGATGAGC 900 consensus_14125#1 GACTCAATGCAGCCGAGGCCCTGCGAGCTCAAGTCAATGCAGAAGGGCAGCAGGATGAGC 254 consensus_14125#2 ------------------------------------------------------------ consensus_14125#0 AGGAAACCTCTAGCTCTAGCGGGAGCAGCAGCAGCAGTAGTAGCAGTGGAAGTGGGAGTG 960 consensus_14125#1 AGGAAACCTCTAGCTCTAGCGGGAGCAGCAGCAGCAGTAGTAGCAGTGGAAGTGGGAGTG 314 consensus_14125#2 ------------------------------------------------------------ consensus_14125#0 GTAGTGGAAGCAGCAGCAGTGATAGTGACGGCAGTGATGGTGAT-TCAGCCAGCTCTGGG 1019 consensus_14125#1 GTAGTGGAAGCAGCAGCAGTGATAGTGACGGCAGTGATGGTGAT-TCAGCCAGCTCTGGG 373 consensus_14125#2 -----------------------------------GATGGGGATGTCAGCCAGCTCTGGG 25 ***** *** *************** consensus_14125#0 GGTGACGTT-GATATATAAGTTTGGTGTACAGAGTTTTCTTGCTG-TGTATGCCATGG-T 1076 consensus_14125#1 GGTGACGTT-GATATATAAGTTTGGTGTACAGAGTTTTCTTGCTG-TGTATGCCATGG-T 430 consensus_14125#2 GGTGACGTTTGATATATAAGTTTGGTGTACAGAGTTTTCTTGCTGGTGTATGCCATGGGT 85 ********* *********************************** ************ * consensus_14125#0 TCACAATT-TTACACCAGTATCAGGAGGTGTAAGCCTTGAATGT-TTAACTCATAG-TTC 1133 consensus_14125#1 TCACAATT-TTACACCAGTATCAGGAGGTGTAAGCCTTGAATGT-TTAACTCATAG-TTC 487 consensus_14125#2 TCACGAGTGTTACACCAGTATCAGGAGGTGTAAGCCTTGAATGTGTTAACTCATAGGTTC 145 **** * * *********************************** *********** *** consensus_14125#0 ACAGGTA-ACAAAATTAAGTTTCTTCTGTTGTGATCTTATTCTGCTGTAATTTGTTTGTT 1192 consensus_14125#1 ACAGGTA-ACAAAATTAAGTTTCTTCTGTTGTGATCTTATTCTGCTGTAATTTGTTTGTT 546 consensus_14125#2 ACAGGTAGACCAAAT--------------------------------------------- 160 ******* ** **** consensus_14125#0 CTCCTCTTGGTTAGTCTGCTATGTTTCTTAGATCTAGCCTGGAGCATAGCATTTGTATGA 1252 consensus_14125#1 CTCCTCTTGGTTAGTCTGCTATGTTTCTTAGATCTAGCCTGGAGCATAGCATTTGTATGA 606 consensus_14125#2 ------------------------------------------------------------ consensus_14125#0 AACCTTTGCATGATGGATTTTCTTCCCAAATATGGGATATATTTTCTCTTGTTTTGAAGT 1312 consensus_14125#1 AACCTTTGCATGATGGATTTTCTTCCCAAATATGGGATATATTTTCTCTTGTTTTGAAGT 666 consensus_14125#2 ------------------------------------------------------------ consensus_14125#0 ACAGAACGGCATATATTCTGATATGTAGACATACATAGTGTGCACCATGTTGTGGGTTAG 1372 consensus_14125#1 ACAGAACGGCATATATTTAGGGATGTAGACATACATAGTGTGCCCCAAA--AAAAATTAA 724 consensus_14125#2 ------------------------------------------------------------ consensus_14125#0 TTGTTTGATGGAAGTATCTGCCCACTTTTTGTATCGTACTTGCTTTGCTTTGCAAATTAA 1432 consensus_14125#1 AAGG-------------------------------------------------------- 728 consensus_14125#2 ------------------------------------------------------------ consensus_14125#0 GGCATGGAGCTGTTATTTTTTGACAAGTAAAAAAATAAAAAGGA 1476 consensus_14125#1 -------------------------------------------- consensus_14125#2 -------------------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||