cluster # 14125

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Oryza sativa
cluster # 14125 cluster # 14125 Sequences # 15 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_14125#0 length = 1476 sequences # 12

consensus_14125#1 length = 728 sequences # 2
consensus_14125#2 length = 160 sequences # 1

consensusID : consensus_14125#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 12
consensus length = 1476
fasta sequence

                              [GGTCGATCCGTCGCGGGGGACCATCTCTCGGCATCGATCGATCGCCGCCGGTGTCGGCGGCGAGGGGCGGCGCGGGGATGGCGAGCGGCAACAGCGGCGAGCCGAGCACGGCGCCGCAGCCGAATCGGTGGTACGAGCTCCGGCTGGGCTCCTCCTGCCGCGACCCCTCCCCCACCGCCAAGTTCTGCACGCTCCGCTATGAATTTAAGCCAGCATCAATTGATAAGACTCAAGCTGGGTCTCTGCAGAAGACCAAAGATAACAGGGTTACTGTGGAATTCCACAACAATCAGCCTGGCAAGCCAAAGGTGACATTTGAAGGAAGCCAAGAAGAGTACAAGGATAATGATGGTGTCTTGTTTTTTGATGGTGAAACCTTTCGTCTGGAGCGGTTGCATCGGGCTGTCAAGAGATTAAGGCATGTCCGAGTTCCAGGAGAGTCTTCGGCAGCCACTTCGGCTACTACTGGAATGGGCGAATCACATTCCCCTCCATTACCGAAAGTTGGAAAGTCACCGGCCATGAGTAAACCTGCTGTACACTCAGTTCCTGTTGAGGTTGAACGCATTGACATTGGTGAACCTGAAAATC------CAGGTCTAAGAAACAATAACAGGAGCACTACATACCAACCTGTTACCACAAATCCATTTTCATTTTCGCCTGATCCAAATGATCAAGAGGAGAACCTAGACATACTTGGTGATGATGACAATGGCTCACCGAATAACATGTCCTCTGGACAAGGAGCTTCTGTTCGTGGTTTTGACATCAACATACCAAACCAGCTTGACATAGATGATGAAATTGCTGATGTAGATGTCAGTGAT-GAGGCTGATGAGGGACTCAATGCAGCCGAGGCCCTGCGAGCTCAAGTCAATGCAGAAGGGCAGCAGGATGAGCAGGAAACCTCTAGCTCTAGCGGGAGCAGCAGCAGCAGTAGTAGCAGTGGAAGTGGGAGTGGTAGTGGAAGCAGCAGCAGTGATAGTGACGGCAGTGATGGTGATTCAGCCAGCTCTGGGGGTGACGTTGATATATAAGTTTGGTGTACAGAGTTTTCTTGCTGTGTATGCCATGGTTCACAATTTTACACCAGTATCAGGAGGTGTAAGCCTTGAATGTTTAACTCATAGTTCACAGGTAACAAAATTAAGTTTCTTCTGTTGTGATCTTATTCTGCTGTAATTTGTTTGTTCTCCTCTTGGTTAGTCTGCTATGTTTCTTAGATCTAGCCTGGAGCATAGCATTTGTATGAAACCTTTGCATGATGGATTTTCTTCCCAAATATGGGATATATTTTCTCTTGTTTTGAAGTACAGAACGGC-ATATATTCTGATATGTAGACATACATAGTGTGCACCATGTTGTGGGTTAGTTGTTTGATGGAAGTATCTGCCCACTTTTTGTATCGTACTTGCTTTGCTTTGCAAATTAAGGCATGGAGCTGTTATTTTTTGACAAGTAAAAAAATAAAAAGGA]

[+] EMBL AK102891             [GGTCGATCCGTCGCGGGGGACCATCTCTCGGCATCGATCGATCGCCGCCGGTGTCGGCGGCGAGGGGCGGCGCGGGGATGGCGAGCGGCAACAGCGGCGAGCCGAGCACGGCGCCGCAGCCGAATCGGTGGTACGAGCTCCGGCTGGGCTCCTCCTGCCGCGACCCCTCCCCCACCGCCAAGTTCTGCACGCTCCGCTATGAATTTAAGCCAGCATCAATTGATAAGACTCAAGCTGGGTCTCTGCAGAAGACCAAAGATAACAGGGTTACTGTGGAATTCCACAACAATCAGCCTGGCAAGCCAAAGGTGACATTTGAAGGAAGCCAAGAAGAGTACAAGGATAATGATGGTGTCTTGTTTTTTGATGGTGAAACCTTTCGTCTGGAGCGGTTGCATCGGGCTGTCAAGGGATTAAGGCGTGTCCGAGTTCCAGGAGAGTCTTCGGCAGCCACTTCGGCTACTACTGGAATGGGCGAATCACATTCCCCTCCATTACCGAAAGTTGGAAAGTCACCGGCCATGAGTAAACCTGCTGTACACTCAGTTCCTGTTGAGGTTGAACGCATTGACATTGGTGAACCTGAAAATC      CAGGTCTAAGAAACAATAACAGGAGCACTACATACCAACCTGTTACCACAAATCCATTTTCATTTTCGCCTGATCCAAATGATCAAGAGGAGAACCTAGACATACTTGGTGATGATGACAATGGCTCACCGAATAACATGTCCTCTGGACAAGGAGCTTCTGTTCGTGGTTTTGACATCAACATACCAAACCAGCTTGACATAGATGATGAAATTGCTGATGTAGATGTCAGTGAT GAGGCTGATGAGGGACTCAATGCAGCCGAGGCCCTGCGAGCTCAAGTCAATGCAGAAGGGCAGCAGGATGAGCAGGAAACCTCTAGCTCTAGCGGGAGCAGCAGCAGCAGTAGTAGCAGTGGAAGTGGGAGTGGTAGTGGAAGCAGCAGCAGTGATAGTGACGGCAGTGATGGTGATTCAGCCAGCTCTGGGGGTGACGTTGATATATAAGTTTGGTGTACAGAGTTTTCTTGCTGTGTATGCCATGGTTCACAATTTTACACCAGTATCAGGAGGTGTAAGCCTTGAATGTTTAACTCATAGTTCACAGGTAACAAAATTAAGTTTCTTCTGTTGTGATCTTATTCTGCTGTAATTTGTTTGTTCTCCTCTTGGTTAGTCTGCTATGTTTCTTAGATCTAGCCTGGAGCATAGCATTTGTATGAAACCTTTGCATGATGGATTTTCTTCCCAAATATGGGATATATTTTCTCTTGTTTTGAAGTACAGAACGGC ATATATTCTGATATGTAGACATACATAGTGTGCACCATGTTGTGGGTTAGT                                                                                                       ]
[+] EMBL AK059119             [GGTCGATCCGTCGCGGGGGACCATCTCTCGGCATCGATCGATCGCCGCCGGTGTCGGCGGCGAGGGGCGGCGCGGGGATGGCGAGCGGCAACAGCGGCGAGCCGAGCACGGCGCCGCAGCCGAATCGGTGGTACGAGCTCCGGCTGGGCTCCTCCTGCCGCGACCCCTCCCCCACCGCCAAGTTCTGCACGCTCCGCTATGAATTTAAGCCAGCATCAATTGATAAGACTCAAGCTGGGTCTCTGCAGAAGACCAAAGATAACAGGGTTACTGTGGAATTCCACAACAATCAGCCTGGCAAGCCAAAGGTGACATTTGAAGGAAGCCAAGAAGAGTACAAGGATAATGATGGTGTCTTGTTTTTTGATGGTGAAACCTTTCGTCTGGAGCGGTTGCATCGGGCTGTCAAGAGATTAAGGCATGTCCGAGTTCCAGGAGAGTCTTCGGCAGCCACTTCGGCTACTACTGGAATGGGCGAATCACATTCCCCTCCATTACCGAAAGTTGGAAAGTCACCGGCCATGAGTAAACCTGCTGTACACTCAGTTCCTGTTGAGGTTGAACGCATTGACATTGGTGAACCTGAAAATC      CAGGTCTAAGAAACAATAACAGGAGCACTACATACCAACCTGTTACCACAAATCCATTTTCATTTTCGCCTGATCCAAATGATCAAGAGGAGAACCTAGACATACTTGGTGATGATGACAATGGCTCACCGAATAACATGTCCTCTGGACAAGGAGCTTCTGTTCGTGGTTTTGACATCAACATACCAAACCAGCTTGACATAGATGATGAAATTGCTGATGTAGATGTCAGTGAT GAGGCTGATGAGGGACTCAATGCAGCCGAGGCCCTGCGAGCTCAAGTCAATGCAGAAGGGCAGCAGGATGAGCAGGAAACCTCTAGCTCTAGCGGGAGCAGCAGCAGCAGTAGTAGCAGTGGAAGTGGGAGTGGTAGTGGAAGCAGCAGCAGTGATAGTGACGGCAGTGATGGTGATTCAGCCAGCTCTGGGGGTGACGTTGATATATAAGTTTGGTGTACAGAGTTTTCTTGCTGTGTATGCCATGGTTCACAATTTTACACCAGTATCAGGAGGTGTAAGCCTTGAATGTTTAACTCATAGTTCACAGGTAACAAAATTAAGTTTCTTCTGTTGTGATCTTATTCTGCTGTAATTTGTTTGTTCTCCTCTTGGTTAGTCTGCTATGTTTCTTAGATCTAGCCTGGAGCATAGCATTTGTATGAAACCTTTGCATGATGGATTTTCTTCCCAAATATGGGATATATTTTCTCTTGTTTTGAAGTACAGAACGGC ATATATTCTGATATGTAGACATACAT                                                                                                                                ]
[+] EMBL CB677067             [          TCGCGGGGGACCATCTCTCGGCATCGATCGATCGCCGCCGGTGTCGGCGGCGAGGGGCGGCGCGGGGATGGCGAGCGGCAACAGCGGCGAGCCGAGCACGGCGCCGCAGCCGAATCGGTGGTACGAGCTCCGGCTGGGCTCCTCCTGCCGCGACCCCTCCCCCACCGCCAAGTTCTGCACGCTCCGCTATGAATTTAAGCCAGCATCAATTGATAAGACTCAAGCTGGGTCTCTGCAGAAGACCAAAGATAACAGGGTTACTGTGGAATTCCACAACAATCAGCCTGGCAAGCCAAAGGTGACATTTGAAGGAAGCCAAGAAGAGTACAAGGATAATGATGGTGTCTTGTTTTTTGATGGTGAAACCTTTCGTCTGGAGCGGTTGCATCGGGCTGTCAAGAGATTAAGGCATGTCCGAGTTCCAGGAGAGTCTTCGGCAGCCACTTCGGCTACTACTGGAATGGGCGAATCACATTCCCCTCCATTACCGAAAGTTGGAAAGTCACCGGCCATGAGTAAACCTGCTGTACACTCAGTTCCTGTTGAGGTTGAACGCATTGACATTGGTGAACCTGAAAATC      CAGGTCTAAGAAACAATAACAGGAGCACTACATACCAACCTGTTACCACAAATCCATTTTCATTTTCGCCTGATCGCAATGATCAAGAGGAGAACCTAGACATACTTGGTGATGATGACAATGGCTCACCGAATAACATGTCCTCTGGAACAGGAGCTTCTGTTCGTGGTTTTGACATCAACATACCAAACCAGCTTGACATAGATGAAGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CB678082             [             CGGGCCACCATCTCTCGGCATCGATCGATCGCCGCCGGTGTCGGCGGCGAGGGGCGGCGCGGGGATGGCGAGCGGCAACAGCGGCGAGCCGAGCACGGCGCCGCAGCCGAATCGGTGGTACGAGCTCCGGCTGGGCTCCTCCTGCCGCGACCCCTCCCCCACCGCCAAGTTCTGCACGCTCCGCTATGAATTTAAGCCAGCATCAATTGATAAGACTCAAGCTGGGTCTCTGCAGAAGACCAAAGATAACAGGGTTACTGTGGAATTCCACAACAATCAGCCTGGCAAGCCAAAGGTGACATTTGAAGGAAGCCAACAAGAGTACAAGGATAATGATGGTGTCTTGTTTTTTGATGGTGAAACCTTTCGTCTGGAGCGGTTGCATCGGGCTGTCAAGAGATTAAGGCATGTCCGAGTTCCAGGAGAGTCTTCGGCAGCCACTTCGGCTACTACTGGAATGGGCGAATCACATTCCCCTCCATTACCGAAAGTTGGAAAGTCACCGGCCATGAGTAAACCTGCTGTACACTCAGTTCCTGTTGAGGTTGAACGCATTGACATTGGTGAACCTGAAAATC      CAGGTCTAAGAAACTATAACAGGAGCACTACATACCAACCTGTTACCACAAATCCATTTTCATTTTCGCCTGATCCAAATGATCAAGAGGAGAACCTAGACATACTTGGTGATGATGACAATGGCTCACCGAATAACATGTCCTCTGGACAAGGAGCTTCTGTTCGTGGTTTTGACATCCACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CB649899             [                 GGACCATCTCTCGGCATCGATCGATCGCCGCCGGTGTCGGCGGCGAGGGGCGGCGCGGGGATGGCGAGCGGCAACAGCGGCGAGCCGAGCACGGCGCCGCAGCCGAATCGGTGGTACGAGCTCCGGCTGGGCTCCTCCTGCCGCGACCCCTCCCCCACCGCCAAGTTCTGCACGCTCCGCTATGAATTTAAGCCAGCATCAATTGATAAGACTCAAGCTGGGTCTCTGCAGAAGACCAAAGATAACAGGGTTACTGTGGAATTCCACAACAATCAGCCTGGCAAGCCAAAGGTGACATTTGAAGGAAGCCAAGAAGAGTACAAGGATAATGATGGTGTCTTGTTTTTTGATGGTGAAACCTTTCGTCTGGAGCGGTTGCATCGGGCTGTCAAGAGATTAAGGCATGTCCGAGTTCCAGGAGAGTCTTCGGCAGCCACTTCGGCTACTACTGGAATGGGCGAATCACATTCCCCTCCATTACCGAAAGTTGGAAAGTCACCGGCCATGAGTAAACCTGCTGTACACTCAGTTCCTGTTGAGGTTGAACGCATTGACATTGGTGAACCTGAAAATC      CAGGTCTAAGAAACAATAACAGGAGCACTACATACCAACCTGTTACCACAAATCCATTTTCATTTTCGCCTGATCCAAATGATCAAGAGGAGAACCTAGACATACTTGGTGATGATGACAATGGCTCACCGAATAACATGTCCTCTGGACAAGGAGCTTCTGTTCGTGGTTTTGACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CB681857             [                                                                                                                                                                                                        GAATTTAAGCCAGCATCAATTGATAAGACTCAAGCTGGGTCTCTGCAGAAGACCAAAGATAACAGGGTTACTGTGGAATTCCACAACAATCAGCCTGGCAAGCCAAAGGTGACATTTGAAGGAAGCCAAGAAGAGTACAAGGATAATGATGGTGTCTTGTTTTTTGATGGTGAAACCTTTCGTCTGGAGCGGTTGCATCGGGCTGTCAAGAGATTAAGGCATGTCCGAGTTCCAGGAGAGTCTTCGGCAGCCACTTCGGCTACTACTGGAATGGGCGAATCACATTCCCCTCCATTACCGAAAGTTGGAAAGTCACCGGCCATGAGTAAACCTGCTGTACACTCAGTTCCTGTTGAGGTTGAACGCATTGACATTGGTGAACCTGAAAATC      CAGGTCTAAGAAACAATAACAGGAGCACTACATACCAACCTGTTACCACAAATCCATTTTCATTTTCGCCTGATCCAAATGATCAAGAGGAGAACCTAGACATACTTGGTGATGATGACAATGGCTCACCGAATAACATGTCCTCTGGACAAGGAGCTTCTGTTCGTGGTTTTGACATCAACATACCAAACCAGCTTGACATAGATGATGAAATTGCTGATGTAGATGTCAGTGAT GAGGCTGATGAGGGACTCAATGCAGCCGAGGCCCTGCGAGCTCAAGTCAATGCAGAAGGGCAGCAGGATGAGCAGGAAACCTCTAGCTCTAGCGGGAGCAGCAGCAGCAGTAGTAGCAGTGGAAGTGGGAGTGGTAGTGGAAGCAGCAGCAGTGATAGTGACGGCAGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AU030594             [                                                                                                                                                                                                                                                                        GGGTTACTGTGGAATTCCACAACAATCAGCCTGGCAAGCCAAAGGTGACATTTGAAGGAAGCCAAGAAGAGTACAAGGATAATGATGGTGTCTTGTTTTTTGATGGTGAAA CTTTCGTCTGGAGCGGTTGCATCGGGCTGTCAAGAGATTAAGGCATGTCCGAGTTCCAGGAGAGTCTTCGGCAGCCACTTCGGCTACTACTGGAATGGGCGAATCACATTCCCCTCCATTACCGAAAGTTGGAAAGTCACCGGCCATGAGTAAACCTGCTGTACACTCAGTTCCTGTTGAGGTTGAACGCATTGACATTGGTGAACCTGAAAATCCAGTTGCAGGTCTAAGAAACAATAACAGGAGCACTACATACCAACCTGTTACCAC AATCCATTTTCATTTTCGCCTGATCC AATGATCAAGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CB649900             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TTGAGGTTGAACGCATTGACATTGGTGAACCTGAAAATC      CAGGTCTAAGAAACAATAACAGGAGCACTACATACCAACCTGTTACCACAAATCCATTTTCATTTTCGCCTGATCCAAATGATCAAGAGGAGAACCTAGACATACTTGGTGATGATGACAATGGCTCACCGAATAACATGTCCTCTGGACAAGGAGCTTCTGTTCGTGGTTTTGACATCAACATACCAAACCAGCTTGACATAGATGATGAAATTGCTGATGTAGATGTCAGTGAT GAGGCTGATGAGGGACTCAATGCAGCCGAGGCCCTGCGAGCTCAAGTCAATGCAGAAGGGCAGCAGGATGAGCAGGAAACCTCTAGCTCTAGCGGGAGCAGCAGCAGCAGTAGTAGCAGTGGAAGTGGGAGTGGTAGTGGAAGCAGCAGCAGTGATAGTGACGGCAGTGATGGTGATTCAGCCAGCTCTGGGGGTGACGTTGATATATAAGTTTGGTGTACAGAGTTTTCTTGCTGTGTATGCCATGGTTCACAATTTTACACCAGTATCAGGAGGTGTAAGCCTTGAATGTTTAACTCATAGTTCACAGGTAACAAAATTAAGTTTCTTCTGTTGTGATCTTATTCTGCTGTAATTTGTTTGTTCTCCTCTTGGTTAGTCTGCTATGTTTCTTAGATCTAGCCTGGAGCATAGCATTTGTATGAAACCTTTGCATGATGGATTTTCTTCCCAAATATGGGATATATTTTCTCTTGTTT                                                                                                                                                                           ]
[+] EMBL AU030595             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                tcCCACAAATCCATTTCCATTTCCNCCTGATCCAAATGATCAAGAGGAGACCCTAGACATACTTGGTGATGATGACAATGGCTCACCGAATAACAT TCCTCTGGACAAGGAGCTCCTGTTCGTGGTTTTGACATCAACATACCAAACCAGCTTGACATAGATGATGAAATTGCTGATGTAGATGTCAGTGAT GAGGCTGATGAGGGACTCAATGCAGCCGAGGCCCTGCGAGCTCAAGTCAATGCAGAAGGGCAGCAGGATGAGCAGGAAACCTCTAGCTCTAGCGGGAGCAGCAGCAGCAGTAGTAGCAGTGGAAGTGGGAGTGGTAGTGGAAGCAGCAGCAGTGATAGTGACGGCAGTGATGGTGATTCAGCCAGCTCTGGGGGTGACGTTGATATATAAGTTTGGTGTACAGAGTTTTCTTGCTGTGTATGCCATGGTTCACAATTTTACACCAGTATCAGGAGGTGTAAGCCTTGAATGTTTAACTCATAGTTCACAGGTAACAAAATTAAGTTTCTTCTGTTGTGATCTTATTCTGCTGTAATTTGTTTGTTCTCCTCTTGGTTAGTCTGCTATGTTTCTTAGATCTAGCCTGGAGCATAGCATTTGTATGAAACCTTTGCATGATGGATTTTCTTCCCAAATATGGGATATAaaaa                                                                                                                                                                                    ]
[-] EMBL CB677068             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TGGCTCACCGAATAACATGTCCTCTGGACAAGGAGCTTCTGTTCGTGGTTTTGACATCAACATACCAAACCAGCTTGACATAGATGATGAAATTGCTGATGTAGATGTCAGTGAT GAGGCTGATGAGGGACTCAATGCAGCCGAGGCCCTGCGAGCTCAAGTCAATGCAGAAGGGCAGCAGGATGAGCAGGAAACCTCTAGCTCTAGCGGGAGCAGCAGCAGCAGTAGTAGCAGTGGAAGTGGGAGTGGTAGTGGAAGCAGCAGCAGTGATAGTGACGGCAGTGATGGTGATTCAGCCAGCTCTGGGGGTGACGTTGATATATAAGTTTGGTGTACAGAGTTTTCTTGCTGTGTATGCCATGGTTCACAATTTTACACCAGTATCAGGAGGTGTAAGCCTTGAATGTTTAACTCATAGTTCACAGGTAACAAAATTAAGTTTCTTCTGTTGTGATCTTATTCTGCTGTAATTTGTTTGTTCTCCTCTTGGTTAGTCTGCTATGTTTCTTAGATCTAGCCTGGAGCATAGCATTTGTATGAAACCTTTGCATGATGGATTTTCTTCCCAAATATGGGATATATTTTCTCTTGTTTTGAAGTACAGAACGGC ATATATTTTGATATGTAGACATACATAGTGTGCACCATGTTGTGGGTTAGTTGTTTGATGGAAGTATCTGCCCACTTTTTGTATCGTACTTGCTTTGCTTTGCAAATTAAGGCATGGAGCTGTTATTTTTTGACAAGTAAAAAAATAAAAAGGA]
[+] EMBL BI810595             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           tcCTGATGTAGATGTCAGTGATAGA GCTGATGAGGGACTCAATGCA CCGA GCCCTGCGAGCTCAAGTCAATGCAGAA GGCAGCAGGATGA CAGGAAACCTCTAGCTCTAGCGGGA CAGCAGCA CAGTAGTAGCAGTGGAAGTGGGAGTGGTAGTGGAAGCAGCAGCAGTGATAGTGACGGCAGTGATGGTGATTCAGCCAGCTCTGGGGGTGACGTTGATATATAAGTTTGGTGTACAGAGTTTTCTTGCTGTGTATGCCATGGTTCACAATTTTACACCAGTATCAGGAGGTGTAAGCCTTGAATGTTTAACTCATAGTTCACAGGTAACAAAATTAAGTTTCTTCTGTTGTGATCTTATTCTGCTGTAATTTGTTTGTTCTCCTCTTGGTTAGTCTGCTATGTTTCTTAGATCTAGCCTGGAGCATAGCATTTGTATGAAACCTTTGCATGATGGATTTTCTTCCCAAATATGGGATATATTTTCTCTTGTTTTGAAGTACAGAACGGC ATATATTCTGATAaaaa                                                                                                                                         ]
[+] EMBL AU181474             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TGNCGGCAGTGATGGTGATTCAGCCAGCTCTGGGGGTGACGTTGATATATAAGTTTGGTGTACAGAGTTTTCTTGCTGTGTATGCCATGGTTCNCAATTTTACACCAGTATCAGGAGGTGTAAGCCTTGAATGTTTAACTCATAGTTCACAGGTAACAAAATTAAGTTTCTTCTGTTGTGATCTTATTCTGCTGTAATTTGTTTGTTCTCCTCTTGGTTAGTCTGCTATGTTTCTTAGATCTAGCCTGGAGCATAGCATTTGTATGAAACCTTTGCATGATGGATTTTCTTCCCAAATATGGGATATATTTTCTCTTGTTTTGAAGTACAGAACGGCTATATATTCTGATATGTAGACATACATAGTGTGCNCCATGTTGTGGGTTAGTTGTTTGATGGAAGTATCTGCCCACTTTTTGTATCGTAaaaaaaa                                                           ]




>consensus_14125#0
GGTCGATCCGTCGCGGGGGACCATCTCTCGGCATCGATCGATCGCCGCCGGTGTCGGCGG
CGAGGGGCGGCGCGGGGATGGCGAGCGGCAACAGCGGCGAGCCGAGCACGGCGCCGCAGC
CGAATCGGTGGTACGAGCTCCGGCTGGGCTCCTCCTGCCGCGACCCCTCCCCCACCGCCA
AGTTCTGCACGCTCCGCTATGAATTTAAGCCAGCATCAATTGATAAGACTCAAGCTGGGT
CTCTGCAGAAGACCAAAGATAACAGGGTTACTGTGGAATTCCACAACAATCAGCCTGGCA
AGCCAAAGGTGACATTTGAAGGAAGCCAAGAAGAGTACAAGGATAATGATGGTGTCTTGT
TTTTTGATGGTGAAACCTTTCGTCTGGAGCGGTTGCATCGGGCTGTCAAGAGATTAAGGC
ATGTCCGAGTTCCAGGAGAGTCTTCGGCAGCCACTTCGGCTACTACTGGAATGGGCGAAT
CACATTCCCCTCCATTACCGAAAGTTGGAAAGTCACCGGCCATGAGTAAACCTGCTGTAC
ACTCAGTTCCTGTTGAGGTTGAACGCATTGACATTGGTGAACCTGAAAATCCAGGTCTAA
GAAACAATAACAGGAGCACTACATACCAACCTGTTACCACAAATCCATTTTCATTTTCGC
CTGATCCAAATGATCAAGAGGAGAACCTAGACATACTTGGTGATGATGACAATGGCTCAC
CGAATAACATGTCCTCTGGACAAGGAGCTTCTGTTCGTGGTTTTGACATCAACATACCAA
ACCAGCTTGACATAGATGATGAAATTGCTGATGTAGATGTCAGTGATGAGGCTGATGAGG
GACTCAATGCAGCCGAGGCCCTGCGAGCTCAAGTCAATGCAGAAGGGCAGCAGGATGAGC
AGGAAACCTCTAGCTCTAGCGGGAGCAGCAGCAGCAGTAGTAGCAGTGGAAGTGGGAGTG
GTAGTGGAAGCAGCAGCAGTGATAGTGACGGCAGTGATGGTGATTCAGCCAGCTCTGGGG
GTGACGTTGATATATAAGTTTGGTGTACAGAGTTTTCTTGCTGTGTATGCCATGGTTCAC
AATTTTACACCAGTATCAGGAGGTGTAAGCCTTGAATGTTTAACTCATAGTTCACAGGTA
ACAAAATTAAGTTTCTTCTGTTGTGATCTTATTCTGCTGTAATTTGTTTGTTCTCCTCTT
GGTTAGTCTGCTATGTTTCTTAGATCTAGCCTGGAGCATAGCATTTGTATGAAACCTTTG
CATGATGGATTTTCTTCCCAAATATGGGATATATTTTCTCTTGTTTTGAAGTACAGAACG
GCATATATTCTGATATGTAGACATACATAGTGTGCACCATGTTGTGGGTTAGTTGTTTGA
TGGAAGTATCTGCCCACTTTTTGTATCGTACTTGCTTTGCTTTGCAAATTAAGGCATGGA
GCTGTTATTTTTTGACAAGTAAAAAAATAAAAAGGA

consensusID : consensus_14125#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 728
fasta sequence

                              [ATTTTCATTTTCGCCTGATCCAAATGATCAAGAGGAGAACCTAGACATACTTGGTGATGATGACAATGGCTCACCGAATAACATGTCCTCTGGACAAGGAGCTTCTGTTCGTGGTTTTGACATCAACATACCAAACCAGCTTGACATAGATGATGAAATTGCTGATGTAGATGTCAGTGATGAGGCTGATGAGGGACTCAATGCAGCCGAGGCCCTGCGAGCTCAAGTCAATGCAGAAGGGCAGCAGGATGAGCAGGAAACCTCTAGCTCTAGCGGGAGCAGCAGCAGCAGTAGTAGCAGTGGAAGTGGGAGTGGTAGTGGAAGCAGCAGCAGTGATAGTGACGGCAGTGATGGTGATTCAGCCAGCTCTGGGGGTGACGTTGATATATAAGTTTGGTGTACAGAGTTTTCTTGCTGTGTATGCCATGGTTCACAATTTTA-CA-CCAGTATCA-GGAGGTGTAAGCCTTGAATGTTTAACTCATAGTTCACAGGTAA-CAAAATTAAGTTTCTTCTGTTGTGATCTTATTCTGCTGTAATTTGTTTGTTCTCCTCTTGGTTAGTCTGCTATGTTTCTTAGATCTAGCCTGGAGCATAGCATTTGTATGAAACCTTTGCATGATGGATTTTCTTCCCAAATATGGGATATATTTTCTCTTGTTTTGAAGTACAGAACGGCATATATTTAGGGATGTAGACATACATAGTGTGCCCCAAAAAAAATTAAAAGG]

[-] EMBL CB681858             [ATTTTCATTTTCGCCTGATCCAAATGATCAAGAGGAGAACCTAGACATACTTGGTGATGATGACAATGGCTCACCGAATAACATGTCCTCTGGACAAGGAGCTTCTGTTCGTGGTTTTGACATCAACATACCAAACCAGCTTGACATAGATGATGAAATTGCTGATGTAGATGTCAGTGATGAGGCTGATGAGGGACTCAATGCAGCCGAGGCCCTGCGAGCTCAAGTCAATGCAGAAGGGCAGCAGGATGAGCAGGAAACCTCTAGCTCTAGCGGGAGCAGCAGCAGCAGTAGTAGCAGTGGAAGTGGGAGTGGTAGTGGAAGCAGCAGCAGTGATAGTGACGGCAGTGATGGTGATTCAGCCAGCTCTGGGGGTGACGTTGATATATAAGTTTGGTGTACAGAGTTTTCTTGCTGTGTATGCCATGGTTCACAATTTTA CA CCAGTATCA GGAGGTGTAAGCCTTGAATGTTTAACTCATAGTTCACAGGTAA CAAAATTAAGTTTCTTCTGTTGTGATCTTATTCTGCTGTAATTTGTTTGTTCTCCTCTTGGTTAGTCTGCTATGTTTCTTAGATCTAGCCTGGAGCATAGCATTTGTATGAAACCTTTGCATGATGGATTTTCTTCCCAAATATGGGATATATTTTCTCTTGTTTTGAAGTACAGAACGGCATATATTTAGGGATGTAGACATACATAGTGTGCCCCAAAAAAAATTAAAAGG]
[+] EMBL BI810128             [                                                                                                                                                                                            ccggaGGACTCAAT CA CCGA GCCCTGCGAGCTCAAGTCAATGCAGAA GGCA CAGGATGA CAGGAAACCTCTAGCTCTA CGGGAGCAGCA CA CAGTAGTA CAGTGGAAGTGGGAGTGGTAGTGGAA CA CA CAGTGATAGTGAC GCAGTGATGGTGATTCA CCAGCTCTGGGGGTGACGTTGATATATAAGTTTGGTGTACAGAGTTTTCTTGCTGTGTATCCCATGGTTCACCATTTTACCACCCAGTATCACGGAGGTGTAACCCTTGAATGTTTAACTCATAGTTCACAGGTAACCAAAATTAAGTTTCTTCTGTTGTGATCTTATTCTGCTGTAATTTGTTTGTTCTCCTCTTGGTTAGTCTGCTATGTTTCTTAGATCTAGCCTGGAGCATAGCATTTGTATGAAACCTTTGCATGATGGATTTTCTTCCC AATATGGGATATATTTTCTCTTGTTTTGAAGTAa                                                            ]




>consensus_14125#1
ATTTTCATTTTCGCCTGATCCAAATGATCAAGAGGAGAACCTAGACATACTTGGTGATGA
TGACAATGGCTCACCGAATAACATGTCCTCTGGACAAGGAGCTTCTGTTCGTGGTTTTGA
CATCAACATACCAAACCAGCTTGACATAGATGATGAAATTGCTGATGTAGATGTCAGTGA
TGAGGCTGATGAGGGACTCAATGCAGCCGAGGCCCTGCGAGCTCAAGTCAATGCAGAAGG
GCAGCAGGATGAGCAGGAAACCTCTAGCTCTAGCGGGAGCAGCAGCAGCAGTAGTAGCAG
TGGAAGTGGGAGTGGTAGTGGAAGCAGCAGCAGTGATAGTGACGGCAGTGATGGTGATTC
AGCCAGCTCTGGGGGTGACGTTGATATATAAGTTTGGTGTACAGAGTTTTCTTGCTGTGT
ATGCCATGGTTCACAATTTTACACCAGTATCAGGAGGTGTAAGCCTTGAATGTTTAACTC
ATAGTTCACAGGTAACAAAATTAAGTTTCTTCTGTTGTGATCTTATTCTGCTGTAATTTG
TTTGTTCTCCTCTTGGTTAGTCTGCTATGTTTCTTAGATCTAGCCTGGAGCATAGCATTT
GTATGAAACCTTTGCATGATGGATTTTCTTCCCAAATATGGGATATATTTTCTCTTGTTT
TGAAGTACAGAACGGCATATATTTAGGGATGTAGACATACATAGTGTGCCCCAAAAAAAA
TTAAAAGG

consensusID : consensus_14125#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 160
fasta sequence

                              [GATGGGGATGTCAGCCAGCTCTGGGGGTGACGTTTGATATATAAGTTTGGTGTACAGAGTTTTCTTGCTGGTGTATGCCATGGGTTCACGAGTGTTACACCAGTATCAGGAGGTGTAAGCCTTGAATGTGTTAACTCATAGGTTCACAGGTAGACCAAAT]

[+] EMBL BI810169             [GATGGGGATGTCAGCCAGCTCTGGGGGTGACGTTTGATATATAAGTTTGGTGTACAGAGTTTTCTTGCTGGTGTATGCCATGGGTTCACGAGTGTTACACCAGTATCAGGAGGTGTAAGCCTTGAATGTGTTAACTCATAGGTTCACAGGTAGACCAAAT]




>consensus_14125#2
GATGGGGATGTCAGCCAGCTCTGGGGGTGACGTTTGATATATAAGTTTGGTGTACAGAGT
TTTCTTGCTGGTGTATGCCATGGGTTCACGAGTGTTACACCAGTATCAGGAGGTGTAAGC
CTTGAATGTGTTAACTCATAGGTTCACAGGTAGACCAAAT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14125#0      GGTCGATCCGTCGCGGGGGACCATCTCTCGGCATCGATCGATCGCCGCCGGTGTCGGCGG 60
consensus_14125#1      ------------------------------------------------------------
consensus_14125#2      ------------------------------------------------------------
                                                                                   

consensus_14125#0      CGAGGGGCGGCGCGGGGATGGCGAGCGGCAACAGCGGCGAGCCGAGCACGGCGCCGCAGC 120
consensus_14125#1      ------------------------------------------------------------
consensus_14125#2      ------------------------------------------------------------
                                                                                   

consensus_14125#0      CGAATCGGTGGTACGAGCTCCGGCTGGGCTCCTCCTGCCGCGACCCCTCCCCCACCGCCA 180
consensus_14125#1      ------------------------------------------------------------
consensus_14125#2      ------------------------------------------------------------
                                                                                   

consensus_14125#0      AGTTCTGCACGCTCCGCTATGAATTTAAGCCAGCATCAATTGATAAGACTCAAGCTGGGT 240
consensus_14125#1      ------------------------------------------------------------
consensus_14125#2      ------------------------------------------------------------
                                                                                   

consensus_14125#0      CTCTGCAGAAGACCAAAGATAACAGGGTTACTGTGGAATTCCACAACAATCAGCCTGGCA 300
consensus_14125#1      ------------------------------------------------------------
consensus_14125#2      ------------------------------------------------------------
                                                                                   

consensus_14125#0      AGCCAAAGGTGACATTTGAAGGAAGCCAAGAAGAGTACAAGGATAATGATGGTGTCTTGT 360
consensus_14125#1      ------------------------------------------------------------
consensus_14125#2      ------------------------------------------------------------
                                                                                   

consensus_14125#0      TTTTTGATGGTGAAACCTTTCGTCTGGAGCGGTTGCATCGGGCTGTCAAGAGATTAAGGC 420
consensus_14125#1      ------------------------------------------------------------
consensus_14125#2      ------------------------------------------------------------
                                                                                   

consensus_14125#0      ATGTCCGAGTTCCAGGAGAGTCTTCGGCAGCCACTTCGGCTACTACTGGAATGGGCGAAT 480
consensus_14125#1      ------------------------------------------------------------
consensus_14125#2      ------------------------------------------------------------
                                                                                   

consensus_14125#0      CACATTCCCCTCCATTACCGAAAGTTGGAAAGTCACCGGCCATGAGTAAACCTGCTGTAC 540
consensus_14125#1      ------------------------------------------------------------
consensus_14125#2      ------------------------------------------------------------
                                                                                   

consensus_14125#0      ACTCAGTTCCTGTTGAGGTTGAACGCATTGACATTGGTGAACCTGAAAATCCAGGTCTAA 600
consensus_14125#1      ------------------------------------------------------------
consensus_14125#2      ------------------------------------------------------------
                                                                                   

consensus_14125#0      GAAACAATAACAGGAGCACTACATACCAACCTGTTACCACAAATCCATTTTCATTTTCGC 660
consensus_14125#1      ----------------------------------------------ATTTTCATTTTCGC 14
consensus_14125#2      ------------------------------------------------------------
                                                                                   

consensus_14125#0      CTGATCCAAATGATCAAGAGGAGAACCTAGACATACTTGGTGATGATGACAATGGCTCAC 720
consensus_14125#1      CTGATCCAAATGATCAAGAGGAGAACCTAGACATACTTGGTGATGATGACAATGGCTCAC 74
consensus_14125#2      ------------------------------------------------------------
                                                                                   

consensus_14125#0      CGAATAACATGTCCTCTGGACAAGGAGCTTCTGTTCGTGGTTTTGACATCAACATACCAA 780
consensus_14125#1      CGAATAACATGTCCTCTGGACAAGGAGCTTCTGTTCGTGGTTTTGACATCAACATACCAA 134
consensus_14125#2      ------------------------------------------------------------
                                                                                   

consensus_14125#0      ACCAGCTTGACATAGATGATGAAATTGCTGATGTAGATGTCAGTGATGAGGCTGATGAGG 840
consensus_14125#1      ACCAGCTTGACATAGATGATGAAATTGCTGATGTAGATGTCAGTGATGAGGCTGATGAGG 194
consensus_14125#2      ------------------------------------------------------------
                                                                                   

consensus_14125#0      GACTCAATGCAGCCGAGGCCCTGCGAGCTCAAGTCAATGCAGAAGGGCAGCAGGATGAGC 900
consensus_14125#1      GACTCAATGCAGCCGAGGCCCTGCGAGCTCAAGTCAATGCAGAAGGGCAGCAGGATGAGC 254
consensus_14125#2      ------------------------------------------------------------
                                                                                   

consensus_14125#0      AGGAAACCTCTAGCTCTAGCGGGAGCAGCAGCAGCAGTAGTAGCAGTGGAAGTGGGAGTG 960
consensus_14125#1      AGGAAACCTCTAGCTCTAGCGGGAGCAGCAGCAGCAGTAGTAGCAGTGGAAGTGGGAGTG 314
consensus_14125#2      ------------------------------------------------------------
                                                                                   

consensus_14125#0      GTAGTGGAAGCAGCAGCAGTGATAGTGACGGCAGTGATGGTGAT-TCAGCCAGCTCTGGG 1019
consensus_14125#1      GTAGTGGAAGCAGCAGCAGTGATAGTGACGGCAGTGATGGTGAT-TCAGCCAGCTCTGGG 373
consensus_14125#2      -----------------------------------GATGGGGATGTCAGCCAGCTCTGGG 25
                                                          ***** *** ***************

consensus_14125#0      GGTGACGTT-GATATATAAGTTTGGTGTACAGAGTTTTCTTGCTG-TGTATGCCATGG-T 1076
consensus_14125#1      GGTGACGTT-GATATATAAGTTTGGTGTACAGAGTTTTCTTGCTG-TGTATGCCATGG-T 430
consensus_14125#2      GGTGACGTTTGATATATAAGTTTGGTGTACAGAGTTTTCTTGCTGGTGTATGCCATGGGT 85
                       ********* *********************************** ************ *

consensus_14125#0      TCACAATT-TTACACCAGTATCAGGAGGTGTAAGCCTTGAATGT-TTAACTCATAG-TTC 1133
consensus_14125#1      TCACAATT-TTACACCAGTATCAGGAGGTGTAAGCCTTGAATGT-TTAACTCATAG-TTC 487
consensus_14125#2      TCACGAGTGTTACACCAGTATCAGGAGGTGTAAGCCTTGAATGTGTTAACTCATAGGTTC 145
                       **** * * *********************************** *********** ***

consensus_14125#0      ACAGGTA-ACAAAATTAAGTTTCTTCTGTTGTGATCTTATTCTGCTGTAATTTGTTTGTT 1192
consensus_14125#1      ACAGGTA-ACAAAATTAAGTTTCTTCTGTTGTGATCTTATTCTGCTGTAATTTGTTTGTT 546
consensus_14125#2      ACAGGTAGACCAAAT--------------------------------------------- 160
                       ******* ** ****                                             

consensus_14125#0      CTCCTCTTGGTTAGTCTGCTATGTTTCTTAGATCTAGCCTGGAGCATAGCATTTGTATGA 1252
consensus_14125#1      CTCCTCTTGGTTAGTCTGCTATGTTTCTTAGATCTAGCCTGGAGCATAGCATTTGTATGA 606
consensus_14125#2      ------------------------------------------------------------
                                                                                   

consensus_14125#0      AACCTTTGCATGATGGATTTTCTTCCCAAATATGGGATATATTTTCTCTTGTTTTGAAGT 1312
consensus_14125#1      AACCTTTGCATGATGGATTTTCTTCCCAAATATGGGATATATTTTCTCTTGTTTTGAAGT 666
consensus_14125#2      ------------------------------------------------------------
                                                                                   

consensus_14125#0      ACAGAACGGCATATATTCTGATATGTAGACATACATAGTGTGCACCATGTTGTGGGTTAG 1372
consensus_14125#1      ACAGAACGGCATATATTTAGGGATGTAGACATACATAGTGTGCCCCAAA--AAAAATTAA 724
consensus_14125#2      ------------------------------------------------------------
                                                                                   

consensus_14125#0      TTGTTTGATGGAAGTATCTGCCCACTTTTTGTATCGTACTTGCTTTGCTTTGCAAATTAA 1432
consensus_14125#1      AAGG-------------------------------------------------------- 728
consensus_14125#2      ------------------------------------------------------------
                                                                                   

consensus_14125#0      GGCATGGAGCTGTTATTTTTTGACAAGTAAAAAAATAAAAAGGA 1476
consensus_14125#1      --------------------------------------------
consensus_14125#2      --------------------------------------------