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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14127#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 14 consensus length = 2127 fasta sequence
[CATCTCGCCTCGAAGGAGGAGTAGGAGGAAGAGAGAAGCCGGCACAAGCGAGCCCAGCAAACGCACGGCACCACGGATCATTGGGATCAAAACACGAGAGCTTAATTGAGAAGCAGAGAAGGAGATCAAGAAAAGCAGAGCAAAGCCGCCGGCGAAGAGGGAGGAGGTGGCCGGTGGGATGGACGTGAAGCGGGCCCGGAGCCCGCGGGCTCCGGGC-GTCGACGCCGACGACGACAAGAAGCGGGCCGCCGAGTGGCGCGGCGCCGTCCGGCCGCACATGGTGCTGGTCGGCTTCCTCATCACCCTGCCCGTCCTGGTCTTCGTCTTCGGCGGCCGCTGGGGCTCCTTCCAAACCACCTCCGCCCCCAACGTCGGCGGCCGCCACGTCGTCCCCGGCGGCGTAACAACGACACAAAAAAATGAAGCCCCGAAAAACGTCTCTGTACCAGCCACTGCAACCAAATCTCTGCCCCAACCCCAGGACAAGCTTCTCGGAGGACTACTCTCTGCCGCATTCGAAGAATCCTCATGTCAGAGCAGATACAAATCATCTCTCTACCGGAAGAAGTCTCCGTTCCCTCTGTCCCCTTACCTGGTTCAGAAGCTGCGGAAGTACGAGGCCTACCACAAGAAGTGCGGCCCTGGCACGAAGCGCTACCGGAAGGCGATCGAGCAGCTCAAGGCGGGGCGCAACGCCGACAACGCCGAGTGCAAGTACGTGGTGTGGTTCCCCTGCAACGGCCTCGGCAACCGCATGCTCACCATCGCCTCCACCTTCCTGTACGCGCTCATCTCCAACCGCGTCCTCCTCATGCACGTCGCGGCGGAGCAGGAGGGCCTCTTCTGCGAGCCGTTCCCGGGGAGCTCGTGGGTGCTCCCGGGCGACTTCCCCCACAACAACCCGCAGGGCCTGCACATCGGCGCGCCGGAGAGCTACGTCAACATGCTCAAGAACAACGTCGTCCGCAACGACGACCCCGGCAGCGTGTCGGCGTCGTCGCTGCCGCCGTACGTGTACCTCCACGTCGAGCAGTTCCGGCTGAAGCTGTCCGACAACATCTTCTGCGACGAGGACCAGTTGATTCTCAACAAGTTCAACTGGATGATACTCAAATCTGACAGCTACTTCGCGCCGGCGCTGTTCATGACGCCGATGTACGAGAAGGAGCTGGAAAAGATGTTCCCGCAGAAGGAGTCAGTGTTCCATCATCTTGGGAGGTACCTGTTCCATCCGACGAACAAAGTATGGGGAATCGTGAGCAGGTACTACGAAGCGTACCTTGCCAGAGTCGACGAGAAAATCGGGTTCCAGATACGGATCTTCCCGGAGAAGCCGATAAAATTCGAGAACATGTATGATCAGCTGACGAGGTGCATCAGGGAGCAGCGGTTGTTGCCGGAGCTCGGCACGGCGGAGCCGGCGAACACGACTGCCGAAGCAGGGAAGGTGAAGGCCGTACTGATCGCTTCTCTGTACTCGGGATATTACGAGAAGATCCGTGGGATGTACTACGAGAATCCAACCAAGACTGGCGAGATCGTCGCGGTGTACCAGCCGAGCCACGAGGAGCAGCAGCAGTACACGTCCAACGAGCACAACCAGAAGGCGCTGGCCGAGATCTATCTGCTCAGCTACTGCGACAAGATCGCCATGAGCGCCTGGTCGACGTTCGGGTACGTGGCCTACAGCTTCGCCGGCGTCAAGCCGTGGATCCTGCTCCGGCCGGACTGGGACAAGGAGAGGTCGGAGGTGGCGTGCGTCAGGTCGACGTCGGTGGAGCCGTGCCTCCACTCGCCGCCGATCCTCTCGTGCAGGGCCAAGAAGGAGGTCGACGCGGCCACCGTCAAGCCGTACGTTCGGCACTGCGAGGATGTCGGGTTCGGTCTCAAGTTGTTCGATAGCTAATTTTTTGGAGAAGTGACTTCTTCGGTTTCACGTTCCGAATTGCGTTCGTTACGTCACGTCCTGTGGATTAACTAGGCCTTTTGGAGATTCGTTATATTCGTTTGGACTCGTATACACCTGAAAATGCACAAAATGTATTATGTAAAATGTATTATGTATCTGTATTCAAATTCGTTCTTCATAAAACAATTCGGATATATATATACACACAAAAAAAGAGA]
[+] EMBL AK072854 [CATCTCGCCTCGAAGGAGGAGTAGGAGGAAGAGAGAAGCCGGCACAAGCGAGCCCAGCAAACGCACGGCACCACGGATCATTGGGATCAAAACACGAGAGCTTAATTGAGAAGCAGAGAAGGAGATCAAGAAAAGCAGAGCAAAGCCGCCGGCGAAGAGGGAGGAGGTGGCCGGTGGGATGGACGTGAAGCGGGCCCGGAGCCCGCGGGCTCCGGGC GTCGACGCCGACGACGACAAGAAGCGGGCCGCCGAGTGGCGCGGCGCCGTCCGGCCGCACATGGTGCTGGTCGGCTTCCTCATCACCCTGCCCGTCCTGGTCTTCGTCTTCGG GGCCGCTGGGGCTCCTTCCAAACCACCTCCGCCCCCAACGTCGGCGGCCGCCACGTCGTCCCCGGCGGCGTAACAACGACACAAAAAAATGAAGCCCCGAAAAACGTCTCTGTACCAGCCACTGCAACCAAATCTCTGCCCCAACCCCAGGACAAGCTTCTCGGAGGACTACTCTCTGCCGCATTCGAAGAATCCTCATGTCAGAGCAGATACAAATCATCTCTCTACCGGAAGAAGTCTCCGTTCCCTCTGTCCCCTTACCTGGTTCAGAAGCTGCGGAAGTACGAGGCCTACCACAAGAAGTGCGGCCCTGGCACGAAGCGCTACCGGAAGGCGATCGAGCAGCTCAAGGCGGGGCGCAACGCCGACAACGCCGAGTGCAAGTACGTGGTGTGGTTCCCCTGCAACGGCCTCGGCAACCGCATGCTCACCATCGCCTCCACCTTCCTGTACGCGCTCATCTCCAACCGCGTCCTCCTCATGCACGTCGCGGCGGAGCAGGAGGGCCTCTTCTGCGAGCCGTTCCCGGGGAGCTCGTGGGTGCTCCCGGGCGACTTCCCCCACAACAACCCGCAGGGCCTGCACATCGGCGCGCCGGAGAGCTACGTCAACATGCTCAAGAACAACGTCGTCCGCAACGACGACCCCGGCAGCGTGTCGGCGTCGTCGCTGCCGCCGTACGTGTACCTCCACGTCGAGCAGTTCCGGCTGAAGCTGTCCGACAACATCTTCTGCGACGAGGACCAGTTGATTCTCAACAAGTTCAACTGGATGATACTCAAATCTGACAGCTACTTCGCGCCGGCGCTGTTCATGACGCCGATGTACGAGAAGGAGCTGGAAAAGATGTTCCCGCAGAAGGAGTCAGTGTTCCATCATCTTGGGAGGTACCTGTTCCATCCGACGAACAAAGTATGGGGAATCGTGAGCAGGTACTACGAAGCGTACCTTGCCAGAGTCGACGAGAAAATCGGGTTCCAGATACGGATCTTCCCGGAGAAGCCGATAAAATTCGAGAACATGTATGATCAGCTGACGAGGTGCATCAGGGAGCAGCGGTTGTTGCCGGAGCTCGGCACGGCGGAGCCGGCGAACACGACTGCCGAAGCAGGGAAGGTGAAGGCCGTACTGATCGCTTCTCTGTACTCGGGATATTACGAGAAGATCCGTGGGATGTACTACGAGAATCCAACCAAGACTGGCGAGATCGTCGCGGTGTACCAGCCGAGCCACGAGGAGCAGCAGCAGTACACGTCCAACGAGCACAACCAGAAGGCGCTGGCCGAGATCTATCTGCTCAGCTACTGCGACAAGATCGCCATGAGCGCCTGGTCGACGTTCGGGTACGTGGCCTACAGCTTCGCCGGCGTCAAGCCGTGGATCCTGCTCCGGCCGGACTGGGACAAGGAGAGGTCGGAGGTGGCGTGCGTCAGGTCGACGTCGGTGGAGCCGTGCCTCCACTCGCCGCCGATCCTCTCGTGCAGGGCCAAGAAGGAGGTCGACGCGGCCACCGTCAAGCCGTACGTTCGGCACTGCGAGGATGTCGGGTTCGGTCTCAAGTTGTTCGATAGCTAATTTTTTGGAGAAGTGACTTCTTCGGTTTCACGTTCCGAATTGCGTTCGTTACGTCACGTCCTGTGGATTAACTAGGCCTTTTGGAGATTCGTTATATTCGTTTGGACTCGTATACACCTGAAAATGCACAAAATGTATTATGTAAAATGTATTATGTATCTGTATTCAAATTCGTTCTTCATAAAACAATTCGGATATATATATACACACACGCAAACAGA]
[+] EMBL CB655511 [ ACGTGAAGCGGGCCCGGAGCCCGCGGGCTCCGGGC GTCGACGCCGACGACGACAAGAAGCGGGCCGCCGAGTGGCGCGGCGCCGTCCGGCCGCACATGGTGCTGGTCGGCTTCCTCATCACCCTGCCCGTCCTGGTCTTCGTCTTCGGCGGCCGCTGGGGCTCCTTCCAAACCACCTCCGCCCCCAACGTCGGCGGCCGCCACGTCGTCCCCGGCGGCGTAACAACGACACAAAAAAATGAAGCCCCGAAAAACGTCTCTGTACCAGCCACTGCAACCAAATCTCTGCCCCAACCCCAGGACAAGCTTCTCGGAGGACTACTCTCTGCCGCATTCGAAGAATCCTCATGTCAGAGCAGATACAAATCATCTCTCTACCGGAAGAAGTCTCCGTTCCCTCTGTCCCCTTACCTGGTTCAGAAGCTGCGGAAGTACGAGGCCTACCACAAGAAGTGCGGCCCTGGCACGAAGCGCTACCGGAAGGCGATCGAGCAGCTCAAGGCGGGGCGCAACGCCGACAACGCCGAGTGCAAGTACGTGGTGTGGTTCCCCTGCAACGGCCTCGGCAACCGCATGCTCACCATCGCCTCCACCTTCCTGTACGCGCTCATCTCCAACCGCGTCCTCCTCATGCACGTCGCGGCGGAGCAGGAGGGCCTCTTCTGCGAGCCGTTCCCGGGGAGCTCGTGGGTGCTCCCGGGCGACTTCCCCCACAACAACCCGCAGGGCCTGCACATCGGCGCGCCGGAGAGCTACGTCAACATGCTCAAGAATCACGTCGTC ]
[+] EMBL CB652814 [ GGCTCCCGGCTGTCGACGCCGACGACGACAAGAAGCGGGCCGCCGAGTGGCGCGGCGCCGTCCGGCCGCACATGGTGCTGGTCGGCTTCCTCATCACCCTGCCCGTCCTGGTCTTCGTCTTCGGCGGCCGCTGGGGCTCCTTCCAAACCACCTCCGCCCCCAACGTCGGCGGCCGCCACGTCGTCCCCGGCGGCGTAACAACGACACAAAAAAATGAAGCCCCGAAAAACGTCTCTGTACCAGCCACTGCAACCAAATCTCTGCCCCAACCCCAGGACAAGCTTCTCGGAGGACTACTCTCTGCCGCATTCGAAGAATCCTCATGTCAGAGCAGATACAAATCATCTCTCTACCGGAAGAAGTCTCCGTTCCCTCTGTCCCCTTACCTGGTTCAGAAGCTGCGGAAGTACGAGGCCTACCACAAGAAGTGCGGCCCTGGCACGAAGCGCTACCGGAAGGCGATCGAGCAGCTCAAGGCGGGGCGCAACGCCGACAACGCCGAGTGCAAGTACGTGGTGTGGTTCCCCTGCAACGGCCTCGGCAACCGCATGCTCACCATCGCCTCCACCTTCCTGTACGCGCTCATCTCCAACCGCGTCCTCCTCATGCACGTCGCGGCGGAGCAGGAGGGCCTCTTCTGCGAGCCGTTCCCGGGGAGCTCGTGGGTGCTCCCGGGCGACTTCCCCCACAACAACCCGCAGGGCCTGCACATCGGCGCGCCGGAGAGCTACGTCAACATGCTCAAGAACAACGTCGTCCGCAACGACGACCCCGGCAGCGTGTCGGCGTCGTCGCTGCCGCCGTA ]
[+] EMBL CB652848 [ GCTCCTGGC GTCGACGCCGACGACGACAAGAAGCGGGCCGCCGAGTGGCGCGGCGCCGTCCGGCCGCACATGGTGCTGGTCGGCTTCCTCATCACCCTGCCCGTCCTGGTCTTCGTCTTCGGCGGCCGCTGGGGCTCCTTCCAAACCACCTCCGCCCCCAACGTCGGCGGCCGCCACGTCGTCCCCGGCGGCGTAACAACGACACAAAAAAATGAAGCCCCGAAAAACGTCTCTGTACCAGCCACTGCAACCAAATCTCTGCCCCAACCCCAGGACAAGCTTCTCGGAGGACTACTCTCTGCCGCATTCGAAGAATCCTCATGTCAGAGCAGATACAAATCATCTCTCTACCGGAAGAAGTCTCCGTTCCCTCTGTCCCCTTACCTGGTTCAGAAGCTGCGGAAGTACGAGGCCTACCACAAGAAGTGCGGCCCTGGCACGAAGCGCTACCGGAAGGCGATCGAGCAGCTCAAGGCGGGGCGCAACGCCGACAACGCCGAGTGCAAGTACGTGGTGTGGTTCCCCTGCAACGGCCTCGGCAACCGCATGCTCACCATCGCCTCCACCTTCCTGTACGCGCTCATCTCCAACCGCGTCCTCCTCATGCACGTCGCGGCGGAGCAGGAGGGCCTCTTCTGCGAGCCGTTCCCGGGGAGCTCGTGGGTGCTCCCGGGCGACTTCCCCCACAACAACCCGCAGGGCCTGCACA ]
[+] EMBL CB652906 [ ACAAGAAGCGGGCCGCCGAGTGGCGCGGCGCCATCCGGCCGCACATGGTGCTGGCCGGCTTCCTCATCACCCTGCCCGTCCTGGACTTCGTCTTCGGCGGCCGCTGGGGCTCCTTCCAAACCACCTCCGCCCCCAACGTCGGCGGCCGCCACGTCGTCCCCGGCGGCGTAACAACGACACAAAAAAATGAAGCCCCGAAAAACGTCTCTGTACCAGCCACTGCAACCAAATCTCTGCCCCAACCCCAGGACAAGCTTCTCGGAGGACTACTCTCTGCCGCATTCGAAGAATCCTCATGTCAGAGCAGATACAAATCCTCTCTCTACCGGAAGAAGTCTCCGTTCCCTCTGTCCCCTTACCTGGATCAGAAGCTGCGGAAGTACGAGGCCTACCACAAGAAGTGCGGCCCTGGCACGAAACGCTACCGGAAGGCGATCGAGCAGCTCAAGGGGGGGCGCAACG ]
[-] EMBL CB652849 [ ATACGGATCTCCCCGGAGAAGCCGATAAAATTCGAGAACATGTATGATCAGCTGACGAGGTGCATCAGGGAGCAGCGGTTGTTGCCGGAGCTCGGCACGGCGGAGCCGGCGAACACGACTGCCGAAGCAGGGAAGGTGAAGGCCGTACTGATCGCTTCTCTGTACTCGGGATATTACGAGAAGATCCGTGGGATGTACTACGAGAATCCAACCAAGACTGGCGAGATCGTCGCGGTGTACCAGCCGAGCCACGAGGAGCAGCAGCAGTACACGTCCAACGAGCACAACCAGAAGGCGCTGGCCGAGATCTATCTGCTCAGCTACTGCGACAAGATCGCCATGAGCGCCTGGTCGACGTTCGGGTACGTGGCCTACAGCTTCGCCGGCGTCAAGCCGTGGATCCTGCTCCGGCCGGACTGGGACAAGGAGAGGTCGGAGGTGGCGTGCGTCAGGTCGACGTCGGTGGAGCCGTGCCTCCACTCGCCGCCGATCCTCTCGTGCAGGGCCAAGAAGGAGGTCGACGCGGCCACCGTCAAGCCGTACGTTCGGCACTGCGAGGATGTCGGGTTCGGTCTCAAGTTGTTCGATAGCTAATTTTTTGGAGAAGTGACTTCTTCGGTTTCACGTTCCGAATTGCGTTCGTTACGTCACGTCCTGTGGATTAACTAGGCCTTTTGGAGATTCGTTATATTCGTTTGGACTCGTATACACCTGAAAATGCACAAAATGTATTATGTTAAAGGTATTATGTATCTGTATTCA ]
[-] EMBL CB652815 [ GGATCTTCCCGGAGAAGCCGATAAAATTCGAGAACATGTATGATCAGCTGACGAGGTGCATCAGGGAGCAGCGGTTGTTGCCGGAGCTCGGCACGGCGGAGCCGGCGAACACGACTGCCGAAGCAGGGAAGGTGAAGGCCGTACTGATCGCTTCTCTGTACTCGGGATATTACGAGAAGATCCGTGGGATGTACTACGAGAATCCAACCAAGACTGGCGAGATCGTCGCGGTGTACCAGCCGAGCCACGAGGAGCAGCAGCAGTACACGTCCAACGAGCACAACCAGAAGGCGCTGGCCGAGATCTATCTGCTCAGCTACTGCGACAAGATCGCCATGAGCGCCTGGTCGACGTTCGGGTACGTGGCCTACAGCTTCGCCGGCGTCAAGCCGTGGATCCTGCTCCGGCCGGACTGGGACAAGGAGAGGTCGGAGGTGGCGTGCGTCAGGTCGACGTCGGTGGAGCCGTGCCTCCACTCGCCGCCGATCCTCTCGTGCAGGGCCAAGAAGGAGGTCGACGCGGCCACCGTCAAGCCGTACGTTCGGCACTGCGAGGATGTCGGGTTCGGTCTCAAGTTGTTCGATAGCTAATTTTTTGGAGAAGTGACTTCTTCGGTTTCACGTTCCGAATTGCGTTCGTTACGTCACGTCCTGTGGATTAACTAGGCCTTTTGGAGATTCGTTATATTCGTTTGGACTCGTATACACCTGAAAATGCACAAAATGTATTATGTAAAATGTATTATGTATCTGTATTCAAATTCGTTCTTCA ]
[-] EMBL CB641473 [ TTCGAGAACATGTATGATCAGCTGACGAGGTGCATCAGGGAGCAGCGGTTGTTGCCGGAGCTCGGCACGGCGGAGCCGGCGAACACGACTGCCGAAGCAGGGAAGGTGAAGGCCGTACTGATCGCTTCTCTGTACTCGGGATATTACGAGAAGATCCGTGGGATGTACTACGAGAATCCAACCAAGACTGGCGAGATCGTCGCGGTGTACCAGCCGAGCCACGAGGAGCAGCAGCAGTACACGTCCAACGAGCACAACCAGAAGGCGCTGGCCGAGATCTATCTGCTCAGCTACTGCGACAAGATCGCCATGAGCGCCTGGTCGACGTTCGGGTACGTGGCCTACAGCTTCGCCGGCGTCAAGCCGTGGATCCTGCTCCGGCCGGACTGGGACAAGGAGAGGTCGGAGGTGGCGTGCGTCAGGTCGACGTCGGTGGAGCCGTGCCTCCACTCGCCGCCGATCCTTTCGTGCAGGGCCAAGAAGGAGGTCGACGCGGCCACCGTCAAGCCGTACGTTCGGCACTGCGAGGATGTCGGGTTCGGTCTCAAGTTGTTCGATAGCTAATTTTTTGGAGAAGTGACTTCTTCGGTTTCACGTTCCGAATTGCGTTCGTTACGTCACGTCCTGTGGATTAACTAGGCCTTTTGGAGATTCGTTATATTCGTTTGGACTCGTATACCCCTGAAAATGCACAAAATGTATTATGTAAAATGTATTATGTATCTGTATTCAAATTCGTTCTTCATAAAACAATTCGGATATATATATCCACAAAAAAAAAG ]
[-] EMBL CB652907 [ TTCGAGAACATGTATGATCAGCTGACGAGGTGCATCAGGGAGCAGCGGTTGTTGCCGGAGCTCGGCACGGCGGAGCCGGCGAACACGACTGCCGAAGCAGGGAAGGTGAAGGCCGTACTGATCGCTTCTCTGTACTCGGGATATTACGAGAAGATCCGTGGGATGTACTACGAGAATCCAACCAAGACTGGCGAGATCGTCGCGGTGTACCAGCCGAGCCACGAGGAGCAGCAGCAGTACACGTCCAACGAGCACAACCAGAAGGCGCTGGCCGAGATCTATCTGCTCAGCTACTGCGACAAGATCGCCATGAGCGCCTGGTCGACGTTCGGGTACGTGGCCTACAGCTTCGCCGGCGTCAAGCCGTGGATCCTGCTCCGGCCGGACTGGGACAAGGAGAGGTCGGAGGTGGCGTGCGTCAGGTCGACGTCGGTGGAGCCGTGCCTCCACTCGCCGCCGATCCTCTCGTGCAGGGCCAAGAAGGAGGTCGACGCGGCCACCGTCAAGCCGTACGTTCGGCACTGCGAGGATGTCGGGTTCGGTCTCAAGTTGTTCGATAGCTAATTTTTTGGAGAAGTGACTTCTTCGGTTTCACGTTCCGAATTGCGTTCGTTACGTCACGTCCTGTGGATTAACTAGGCCTTTTGGAGATTCGTTATATTCGTTTGGACTCGTATACACCTGAAAATGCc ]
[-] EMBL CB655512 [ AGAACATGTATGATCAGCTGACGAGGTGCATCAGGGAGCAGCGGTTGTTGCCGGAGCTCGGCACGGCGGAGCCGGCGAACACGACTGCCGAAGCAGGGAAGGTGAAGGCCGTACTGATCGCTTCTCTGTACTCGGGATATTACGAGAAGATCCGTGGGATGTACTACGAGAATCCAACCAAGACTGGCGAGATCGTCGCGGTGTACCAGCCGAGCCACGAGGAGCAGCAGCAGTACACGTCCAACGAGCACAACCAGAAGGCGCTGGCCGAGATCTATCTGCTCAGCTACTGCGACAAGATCGCCATGAGCGCTTGGTCGACGTTCGGGTACGTGGCCTACAGCTTCGCCGGCGTCAAGCCGTGGATCCTGCTCCGGCCGGATTGGGACAAGGAGAGGTCGGAGGTGGCGTGCGTCAGGTCGACGTCGGTGGAGCCGTGCCTCCACTCGCCGCCGATCCTCTCGTGCAGGGCCAAGAAGGAGGTCGACGCGGCCACCGTCAAGCCGTACGTTCGGCACTGCGAGGATGTCGGGTTCGGTCTCAAGTTGTTCGATAGCTAATTTTTTGGAGAAGTGACTTCTTCGGTTTCACGTTCGGAATTGCGTTCGTTACGTCACGTCCTGTGGATTAACTAGGCCTTTTGGAGATTCGTTATATTCGTTTGGACTCGTATACACCTGAAAATGCACAAAATGTATTATGTAAAATGTATTATGTATCTGTATTCAAATTCGTTGTTCATAAAACAATTCGGATATATATATACA ]
[-] EMBL CB641394 [ CAGCGGTTGTTGCCGGAGCTCGGCACGGCGGAGCCGGCGAACACGACTGCCGAAGCAGGGAAGGTGAAGGCCGTACTGATCGCTTCTCTGTACTCGGGATATTACGAGAAGATCCGTGGGATGTACTACGAGAATCCAACCAAGACTGGCGAGATCGTCGCGGTGTACCAGCCGAGCCACGAGGAGCAGCAGCAGTACACGTCCAACGAGCACAACCAGAAGGCGCTGGCCGAGATCTATCTGCTCAGCTACTGCGACAAGATCGCCATGAGCGCCTGGTCGACGTTCGGGTACGTGGCCTACAGCTTCGCCGGCGTCAAGCCGTGGATCCTGCTCCGGCCGGACTGGGACAAGGAGAGGTCGGAGGTGGCGTGCGTCAGGTCGACGTCGGTGGAGCCGTGCCTCCACTCGCCGCCGATCCTCTCGTGCAGGGCCAAGAAGGAGGTCGACGCGGCCACCGTCAAGCCGTACGTTCGGCACTGCGAGGATGTCGGGTTCGGTCTCAAGTTGTTCGATAGCTAATTTTTTGGAGAAGTGACTTCTTCGGTTTCACGTTCCGAATTGCGTTCGTTACGTCACGTCCTGTGGATTAACTAGGCCTTTTGGAGATTCGTTATATTCGTTTGGACTCGTATACCCCTGAAAATGCACAAAATGTATTATGTAAAATGTATTATGTATCTGTATTCAAATTCGTTCGTCATAAAACAATTCGGATATATATATCCACAAAAAAAAAG ]
[+] EMBL CB640020 [ ACTGATCGCTTCTCTGTACTCGGGATATTACGAGAAGATCCGTGGGATGTACTACGAGAATCCAACCAAGACTGGCGAGATCGTCGCGGTGTACCAGCCGAGCCACGAGGAGCAGCAGCAGTACACGTCCAACGAGCACAACCAGAAGGCGCTGGCCGAGATCTATCTGCTCAGCTACTGCGACAAGATCGCCATGAGCGCCTGGTCGACGTTCGGGTACGTGGCCTACAGCTTCGCCGGCGTCAAGCCGTGGATCCTGCTCCGGCCGGACTGGGACAAGGAGAGGTCGGAGGTGGCGTGCGTCAAGTCGACGTCGGTGGAGCCGTGCCTCCACTCGCCGCCGATCCTCTCGTGCAGGGCCAAGAAGGAGGTCGACGCGGCCACCGTCAAGCCGTACGTTCGGCACTGCGAGGATGTCGGGTTCGGTCTCAAGTTGTTCGATAGCTAATTTTTTGGAGAAGTGACTTCTTCGGTTTCACGTTCCGAATTGCGTTCGTTACGTCACGTCCTGTGGATT ]
[-] EMBL CF312679 [ AGCCGTGGATCCTGCTCCGGCCGGACTGGGACAAGGAGAGGTCGGAGGTGGCGTGCGTCAGGTCGACGTCGGTGGAGCCGTGCCTCCACTCGCCGCCGATCCTTTCGTGCAGGGCCAAGAAGGAGGTCGACGCGGCCACTGTCAAGCCGTACGTTCGGCACTGCGAGGATGTCGGGTTCGGTCTCAAGTTGTTCGATAGCTAATTTTTTGGAGAAGTGACTTCTTCGGTTTCACGTTCCGAATTGCGTTCGTTACGTCACGTCCTGTGGATTAACTAGGCCTTTTGGAGATTCGTTATATTCGTTTGGACTCGTATACACCTGAAAATGCACAAAATGTATTATGTAAAATGTATTATGTATCTGTATTCAAATTCGTTCTTCATAAAACAATTCGGATATATATta ]
[+] EMBL BQ906461 [ TTTGGAGATTCGTTATATTCGTTTGGACTCGTATACACCTGAAAATGCACAAAATGTATTATGTAAAATGTATTATGTATCTGTATTCAAATTCGTTCTTCACCANACAATTCGGATATATATATACACACAAAA ]
consensusID : consensus_14127#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 839 fasta sequence
[TACTCGAGTGGTCCCTGGATTTACTGGAGTAGCAGACAAACTTAAGCATCTTGGGAGGCCTCATGCCCTCGTGAAAGTAGGTGGTCCGAGATGGATAATTTCTGCCGTGCATGTTGCCAGCAATAATGCTGGTAACAACGCTGTTGAGAGTGATGACAAATCTACAACAAAGTAAACTTTTGTTCCTATATGGGGGCTGTTCTGAGAGGAAAAAAAAGTACAGCACGATGTTTATTTTGACAAAATGAAAATGAAGCCCCGAAAAACGTCTCTGTACCAGCCACTGCAACCAAATCTCTGCCCCAACCCCAGGACAAGCTTCTCGGAGGACTACTCTCTGCCGCATTCGAAGAATCCTCATGTCAGAGCAGATACAAATCATCTCTCTACCGGAAGAAGTCTCCGTTCCCTCTGTCCCCTTACCTGGTTCAGAAGCTGCGGAAGTACGAGGCCTACCACAAGAAGTGCGGCCCTGGCACGAAGCGCTACCGGAAGGCGATCGAGCAGCTCAAGGCGGGGCGCAACGCCGACAACGCCGAGTGCAAGTACGTGGTGTGGTTCCCCTGCAACGGCCTCGGCAACCGCATGCTCACCATCGCCTCCACCTTCCTGTACGCGCTCATCTCCAACCGCGTCCTCCTCATGCACGTCGCGGCGGAGCAGGAGGGCCTCTTCTGCGAGCCGTTCCCGGGGAGCTCGTGGGTGCTCCCGGGCGACTTCCCCCACAACAACCCGCAGGGCCTGCACATCGGCGCGCCGGAGAGCTACGTCAACATGCTCAAGAAACACGTCGTCCGCAACGACGACCCCGGCAGCGTGTCGGCGTCGTCGCTGCCGCC]
[+] EMBL CB641472 [TACTCGAGTGGTCCCTGGATTTACTGGAGTAGCAGACAAACTTAAGCATCTTGGGAGGCCTCATGCCCTCGTGAAAGTAGGTGGTCCGAGATGGATAATTTCTGCCGTGCATGTTGCCAGCAATAATGCTGGTAACAACGCTGTTGAGAGTGATGACAAATCTACAACAAAGTAAACTTTTGTTCCTATATGGGGGCTGTTCTGAGAGGAAAAAAAAGTACAGCACGATGTTTATTTTGACAAAATGAAAATGAAGCCCCGAAAAACGTCTCTGTACCAGCCACTGCAACCAAATCTCTGCCCCAACCCCAGGACAAGCTTCTCGGAGGACTACTCTCTGCCGCATTCGAAGAATCCTCATGTCAGAGCAGATACAAATCATCTCTCTACCGGAAGAAGTCTCCGTTCCCTCTGTCCCCTTACCTGGTTCAGAAGCTGCGGAAGTACGAGGCCTACCACAAGAAGTGCGGCCCTGGCACGAAGCGCTACCGGAAGGCGATCGAGCAGCTCAAGGCGGGGCGCAACGCCGACAACGCCGAGTGCAAGTACGTGGTGTGGTTCCCCTGCAACGGCCTCGGCAACCGCATGCTCACCATCGCCTCCACCTTCCTGTACGCGCTCATCTCCAACCGCGTCCTCCTCATGCACGTCGCGGCGGAGCAGGAGGGCCTCTTCTGCGAGCCGTTCCCGGGGAGCTCGTGGGTGCTCCCGGGCGACTTCCCCCACAACAACCCGCAGGGCCTGCACATCGGCGCGCCGGAGAGCTACGTCAACATGCTCAAGAAACACGTCGTCCGCAACGACGACCCCGGCAGCGTGTCGGCGTCGTCGCTGCCGCC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_14127#0 CATCTCGCCTCGAAGGAGGAGTAGGAGGAAGAGAGAAGCCGGCACAAGCGAGCCCAGCAA 60
consensus_14127#1 ------------------------------------------------------------
consensus_14127#0 ACGCACGGCACCACGGATCATTGGGATCAAAACACGAGAGCTTAATTGAGAAGCAGAGAA 120
consensus_14127#1 ------------------------------------------------------------
consensus_14127#0 GGAGATCAAGAAAAGCAGAGCAAAGCCGCCGGCGAAGAGGGAGGAGGTGGCCGGTGGGAT 180
consensus_14127#1 ---------------------------------------TACTCGAGTGGTCCCTGG-AT 20
**** * *** **
consensus_14127#0 GGACGTGAAGCGGGCCCGGAGCCCGCGGGCTCCGGGCGTCGACGCCGACGACGACAAGAA 240
consensus_14127#1 TTAC-TGGAGTAGCAGACAAACTTAAGCATCTTGGGAGGCCTCATGCCCTCGTGAAAGTA 79
** ** ** * * * * *** * * * * *** *
consensus_14127#0 GCGGGCCGCCGAGTGGCGCGGCGCCGTCCGGCCGCACATGGTGCTGGTCGGCTTCCTCAT 300
consensus_14127#1 GGTGGTC--CGAGATGGATAAT----TTCTGCCGTGCATGTTGCCAGCAATAATGCTGGT 133
* ** * **** * * * **** **** *** * * ** *
consensus_14127#0 CACCCTGCCCGTCCTGGTCTTCGTCT-TCGGCGGCCGCTGGGGCTCCTTCCAAACCACCT 359
consensus_14127#1 AACAACGCTGTTGAGAGTGATGACAAATCTACAACAAAGTAAACTTTTGTT--CCTATAT 191
** ** * ** * ** * * ** * * * *
consensus_14127#0 CCGCCCCCAACGTCGGCGGCCGCCACGTCGTCCCCGGCGGCGTAACAACGACACAA-AAA 418
consensus_14127#1 GGGGGCTGTTCTGAGAGGAAAAAAAAGTACAGCACGATG--TTTATTTTGACAAAATGAA 249
* * * * * * ** * ** * * * **** ** **
consensus_14127#0 AATGAAGCCCCGAAAAACGTCTCTGTACCAGCCACTGCAACCAAATCTCTGCCCCAACCC 478
consensus_14127#1 AATGAAGCCCCGAAAAACGTCTCTGTACCAGCCACTGCAACCAAATCTCTGCCCCAACCC 309
************************************************************
consensus_14127#0 CAGGACAAGCTTCTCGGAGGACTACTCTCTGCCGCATTCGAAGAATCCTCATGTCAGAGC 538
consensus_14127#1 CAGGACAAGCTTCTCGGAGGACTACTCTCTGCCGCATTCGAAGAATCCTCATGTCAGAGC 369
************************************************************
consensus_14127#0 AGATACAAATCATCTCTCTACCGGAAGAAGTCTCCGTTCCCTCTGTCCCCTTACCTGGTT 598
consensus_14127#1 AGATACAAATCATCTCTCTACCGGAAGAAGTCTCCGTTCCCTCTGTCCCCTTACCTGGTT 429
************************************************************
consensus_14127#0 CAGAAGCTGCGGAAGTACGAGGCCTACCACAAGAAGTGCGGCCCTGGCACGAAGCGCTAC 658
consensus_14127#1 CAGAAGCTGCGGAAGTACGAGGCCTACCACAAGAAGTGCGGCCCTGGCACGAAGCGCTAC 489
************************************************************
consensus_14127#0 CGGAAGGCGATCGAGCAGCTCAAGGCGGGGCGCAACGCCGACAACGCCGAGTGCAAGTAC 718
consensus_14127#1 CGGAAGGCGATCGAGCAGCTCAAGGCGGGGCGCAACGCCGACAACGCCGAGTGCAAGTAC 549
************************************************************
consensus_14127#0 GTGGTGTGGTTCCCCTGCAACGGCCTCGGCAACCGCATGCTCACCATCGCCTCCACCTTC 778
consensus_14127#1 GTGGTGTGGTTCCCCTGCAACGGCCTCGGCAACCGCATGCTCACCATCGCCTCCACCTTC 609
************************************************************
consensus_14127#0 CTGTACGCGCTCATCTCCAACCGCGTCCTCCTCATGCACGTCGCGGCGGAGCAGGAGGGC 838
consensus_14127#1 CTGTACGCGCTCATCTCCAACCGCGTCCTCCTCATGCACGTCGCGGCGGAGCAGGAGGGC 669
************************************************************
consensus_14127#0 CTCTTCTGCGAGCCGTTCCCGGGGAGCTCGTGGGTGCTCCCGGGCGACTTCCCCCACAAC 898
consensus_14127#1 CTCTTCTGCGAGCCGTTCCCGGGGAGCTCGTGGGTGCTCCCGGGCGACTTCCCCCACAAC 729
************************************************************
consensus_14127#0 AACCCGCAGGGCCTGCACATCGGCGCGCCGGAGAGCTACGTCAACATGCTCAAGAACAAC 958
consensus_14127#1 AACCCGCAGGGCCTGCACATCGGCGCGCCGGAGAGCTACGTCAACATGCTCAAGAAACAC 789
******************************************************** **
consensus_14127#0 GTCGTCCGCAACGACGACCCCGGCAGCGTGTCGGCGTCGTCGCTGCCGCCGTACGTGTAC 1018
consensus_14127#1 GTCGTCCGCAACGACGACCCCGGCAGCGTGTCGGCGTCGTCGCTGCCGCC---------- 839
**************************************************
consensus_14127#0 CTCCACGTCGAGCAGTTCCGGCTGAAGCTGTCCGACAACATCTTCTGCGACGAGGACCAG 1078
consensus_14127#1 ------------------------------------------------------------
consensus_14127#0 TTGATTCTCAACAAGTTCAACTGGATGATACTCAAATCTGACAGCTACTTCGCGCCGGCG 1138
consensus_14127#1 ------------------------------------------------------------
consensus_14127#0 CTGTTCATGACGCCGATGTACGAGAAGGAGCTGGAAAAGATGTTCCCGCAGAAGGAGTCA 1198
consensus_14127#1 ------------------------------------------------------------
consensus_14127#0 GTGTTCCATCATCTTGGGAGGTACCTGTTCCATCCGACGAACAAAGTATGGGGAATCGTG 1258
consensus_14127#1 ------------------------------------------------------------
consensus_14127#0 AGCAGGTACTACGAAGCGTACCTTGCCAGAGTCGACGAGAAAATCGGGTTCCAGATACGG 1318
consensus_14127#1 ------------------------------------------------------------
consensus_14127#0 ATCTTCCCGGAGAAGCCGATAAAATTCGAGAACATGTATGATCAGCTGACGAGGTGCATC 1378
consensus_14127#1 ------------------------------------------------------------
consensus_14127#0 AGGGAGCAGCGGTTGTTGCCGGAGCTCGGCACGGCGGAGCCGGCGAACACGACTGCCGAA 1438
consensus_14127#1 ------------------------------------------------------------
consensus_14127#0 GCAGGGAAGGTGAAGGCCGTACTGATCGCTTCTCTGTACTCGGGATATTACGAGAAGATC 1498
consensus_14127#1 ------------------------------------------------------------
consensus_14127#0 CGTGGGATGTACTACGAGAATCCAACCAAGACTGGCGAGATCGTCGCGGTGTACCAGCCG 1558
consensus_14127#1 ------------------------------------------------------------
consensus_14127#0 AGCCACGAGGAGCAGCAGCAGTACACGTCCAACGAGCACAACCAGAAGGCGCTGGCCGAG 1618
consensus_14127#1 ------------------------------------------------------------
consensus_14127#0 ATCTATCTGCTCAGCTACTGCGACAAGATCGCCATGAGCGCCTGGTCGACGTTCGGGTAC 1678
consensus_14127#1 ------------------------------------------------------------
consensus_14127#0 GTGGCCTACAGCTTCGCCGGCGTCAAGCCGTGGATCCTGCTCCGGCCGGACTGGGACAAG 1738
consensus_14127#1 ------------------------------------------------------------
consensus_14127#0 GAGAGGTCGGAGGTGGCGTGCGTCAGGTCGACGTCGGTGGAGCCGTGCCTCCACTCGCCG 1798
consensus_14127#1 ------------------------------------------------------------
consensus_14127#0 CCGATCCTCTCGTGCAGGGCCAAGAAGGAGGTCGACGCGGCCACCGTCAAGCCGTACGTT 1858
consensus_14127#1 ------------------------------------------------------------
consensus_14127#0 CGGCACTGCGAGGATGTCGGGTTCGGTCTCAAGTTGTTCGATAGCTAATTTTTTGGAGAA 1918
consensus_14127#1 ------------------------------------------------------------
consensus_14127#0 GTGACTTCTTCGGTTTCACGTTCCGAATTGCGTTCGTTACGTCACGTCCTGTGGATTAAC 1978
consensus_14127#1 ------------------------------------------------------------
consensus_14127#0 TAGGCCTTTTGGAGATTCGTTATATTCGTTTGGACTCGTATACACCTGAAAATGCACAAA 2038
consensus_14127#1 ------------------------------------------------------------
consensus_14127#0 ATGTATTATGTAAAATGTATTATGTATCTGTATTCAAATTCGTTCTTCATAAAACAATTC 2098
consensus_14127#1 ------------------------------------------------------------
consensus_14127#0 GGATATATATATACACACAAAAAAAGAGA 2127
consensus_14127#1 -----------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||