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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14137#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 2195 fasta sequence
[CCCACTTCTCAACCTCGCCTCGCCATCTCCGCGCCGCGGCCCAGATCCCTCCGGCGAGCGCCGCCGCCGCCACCGCCTCCGCCATGGACCGCCTCCGCGCGGGGAGCCCCGTCTACGGGCGGCAGCGGAGCGGCAGCAGCACGGGCTCCTCCTCCCCGGGCGGCGTCTCCCCGTCCCACCACCGCTCCTCCTCCACCTCCTCCGCCGCCTCCGCCGCCGCGGGGCTGGGCGGCGGCGTCTCCAACGTGCGCCGCACGCAGAACGTCGCGGCGCGGGCGGCCGCCGCGAGGCTGGCCCAGGTCATGGCGTCACAGAGCGCCGCGGCCGCCGCGGGCCGCGACGACGACGACGACGACGACGACTACGCCAATGACCACCCGCCCGCCCCTCCCCCCGCGAGGTTCGGCTCCGCGCGCCCCGCCGCGGCGCACGGCAGCAACGGCGTCTCGTTGCTCGGCCGCACCGCGAGATCTCCCTCCCCTGCGTTAGGTAGGAACATTGTAGAGCCACCTCCTACTGTCCGCTCAACATCAGCTGGGAGGCCTGCCGTTGCTTCACGGCCGACCACCACGGTGGTTCCACCGATCAAAACCAGCACGACATTGCGGACACCATCGCCTATTCCACCTGTGGCTGTGGAGCCTCCAGTGGACCGCAGTCGGCAGAAAAGGTTTGATACAGGGCATCTCAACTCCAGAGAATCAACACCAAAAAGGGAGGCGTCTGCACTTCAAGATGAGCTTGATATACTACAAGAGGAGAATGAGAGTGTTCTAGAAAAGCTACGACTTGCTGAAGAAAGATGTGAAGAAGCAGAAGCTAGAGCCAAGGAGCTTGAGAAACAGGTAGCTGCCCTTGGGGAAGGGGTATCATTAGAAGCTCGCCTCTTGAGCAGGAAAGAAGCTGCCCTTAAACAGAGGGAGGCTGCACTGAAGGCTGCAAGGGAATCAAAAGATGGTAAAGATGGGGAAGTGACAACACTAAAGCATGAACTGGATTGTGCCAAAGAAGAGGTTGTAACAGCTATGGAGCAGCTAAAGGAAGCAGAGACTGAAACAAAGGCCCTCCGGTCCATGACTCAGAGAATGATCTTAACCCAAGAGGAAATGGAAGAGGTGGTCCTTAAAAGGTGCTGGCTTTCACGTTATTGGGGCTTAGCGGTTCAATACGGAGTTTATCCCGAGATTGCGGTATCAAAGCATGAACATTGGTCATCATTAGCTCCTCTTCCCCTTGAGGTTGTTCTCTCTGCTGGTCAAAAGGCTAAGGAGGAACCTCTCAAACAAGGTGAGGATGACGCCCAAAGGAGAAATAAACTTGTGCGAGATATGAGTGATGTAATGGGAGAAGGCA--ATATAGAGAGCATGCTCTCAGTTGAAATGGGGCTTAGAGAGCTTTCATCATTGAAGGTGGAAGATGCTGTTGTGGTTGCACTTGGTCAACACCGGAGACCTAGTATAGTTCGGCAATTCACATCAGATTTTAAATCACCTGGTGAACCTAAATTCTTGGAGGCGTTTGATCTTAGCCATGAAGAGGCAG-AAGATGTTAGCTTTAAGCAGGCATGGCTTATATACTTCTGGAGAAGAGCTAAAACTCATGGCATTGAGGAAGACATTGCTGAAGAACGGCTTCAGTTCTGGATTGGTCGCAATGCAGTAGCCCCAACTTCTCATGATGCTATAGATGTGGAGCGAGGTCTAACAGAGCTCAGGAAACTGGGCATAGAGCAGCAACTGTGGGAAGGATCACGTGCAGATATCGATGAAGATTCATCGGCAATTGAGAATCACTAGGCACATCTCAAGGTTGTTTATGGTACATGATTATTCCAATTTTGGAGAATGGAAATGCTTTTTCGCGGCTGGTCTTGGGCCATTGCCATCATTGGATCCCTGAATGGTGCTGCAATCTTCGGGTGTTGAGCAATGGGCAGTCTTCGGGTGTTGAGCGATATTATGGGCTTGTCCAGAGATATTGTGTAGTGCATGTGCGAGCCATTTATCTTTTGTCGAAATATTTTTGTGAAATGTGTAATTGTTTTGTCCTGGCAATATGATGGTGATCTCACTTCATCCAATTTGTGAATTTGTGATTACACCACATGTGTACTGCCTGTTATTCAGTAAAATATACAGAGAGGAAGCTATGCTTCCTGCGACAAATGAGCAAATCATAAGTGATGATTCTTTCTG]
[+] EMBL AK120714 [CCCACTTCTCAACCTCGCCTCGCCATCTCCGCGCCGCGGCCCAGATCCCTCCGGCGAGCGCCGCCGCCGCCACCGCCTCCGCCATGGACCGCCTCCGCGCGGGGAGCCCCGTCTACGGGCGGCAGCGGAGCGGCAGCAGCACGGGCTCCTCCTCCCCGGGCGGCGTCTCCCCGTCCCACCACCGCTCCTCCTCCACCTCCTCCGCCGCCTCCGCCGCCGCGGGGCTGGGCGGCGGCGTCTCCAACGTGCGCCGCACGCAGAACGTCGCGGCGCGGGCGGCCGCCGCGAGGCTGGCCCAGGTCATGGCGTCACAGAGCGCCGCGGCCGCCGCGGGCCGCGACGACGACGACGACGACGACGACTACGCCAATGACCACCCGCCCGCCCCTCCCCCCGCGAGGTTCGGCTCCGCGCGCCCCGCCGCGGCGCACGGCAGCAACGGCGTCTCGTTGCTCGGCCGCACCGCGAGATCTCCCTCCCCTGCGTTAGGTAGGAACATTGTAGAGCCACCTCCTACTGTCCGCTCAACATCAGCTGGGAGGCCTGCCGTTGCTTCACGGCCGACCACCACGGTGGTTCCACCGATCAAAACCAGCACGACATTGCGGACACCATCGCCTATTCCACCTGTGGCTGTGGAGCCTCCAGTGGACCGCAGTCGGCAGAAAAGGTTTGATACAGGGCATCTCAACTCCAGAGAATCAACACCAAAAAGGGAGGCGTCTGCACTTCAAGATGAGCTTGATATACTACAAGAGGAGAATGAGAGTGTTCTAGAAAAGCTACGACTTGCTGAAGAAAGATGTGAAGAAGCAGAAGCTAGAGCCAAGGAGCTTGAGAAACAGGTAGCTGCCCTTGGGGAAGGGGTATCATTAGAAGCTCGCCTCTTGAGCAGGAAAGAAGCTGCCCTTAAACAGAGGGAGGCTGCACTGAAGGCTGCAAGGGAATCAAAAGATGGTAAAGATGGGGAAGTGACAACACTAAAGCATGAACTGGATTGTGCCAAAGAAGAGGTTGTAACAGCTATGGAGCAGCTAAAGGAAGCAGAGACTGAAACAAAGGCCCTCCGGTCCATGACTCAGAGAATGATCTTAACCCAAGAGGAAATGGAAGAGGTGGTCCTTAAAAGGTGCTGGCTTTCACGTTATTGGGGCTTAGCGGTTCAATACGGAGTTTATCCCGAGATTGCGGTATCAAAGCATGAACATTGGTCATCATTAGCTCCTCTTCCCCTTGAGGTTGTTCTCTCTGCTGGTCAAAAGGCTAAGGAGGAACCTCTCAAACAAGGTGAGGATGACGCCCAAAGGAGAAATAAACTTGTGCGAGATATGAGTGATGTAATGGGAGAAGGCA ATATAGAGAGCATGCTCTCAGTTGAAATGGGGCTTAGAGAGCTTTCATCATTGAAGGTGGAAGATGCTGTTGTGGTTGCACTTGGTCAACACCGGAGACCTAGTATAGTTCGGCAATTCACATCAGATTTTAAATCACCTGGTGAACCTAAATTCTTGGAGGCGTTTGATCTTAGCCATGAAGAGGCAG AAGATGTTAGCTTTAAGCAGGCATGGCTTATATACTTCTGGAGAAGAGCTAAAACTCATGGCATTGAGGAAGACATTGCTGAAGAACGGCTTCAGTTCTGGATTGGTCGCAATGCAGTAGCCCCAACTTCTCATGATGCTATAGATGTGGAGCGAGGTCTAACAGAGCTCAGGAAACTGGGCATAGAGCAGCAACTGTGGGAAGGATCACGTGCAGATATCGATGAAGATTCATCGGCAATTGAGAATCACTAGGCACATCTCAAGGTTGTTTATGGTACATGATTATTCCAATTTTGGAGAATGGAAATGCTTTTTCGCGGCTGGTCTTGGGCCATTGCCATCATTGGATCCCTGAATGGTGCTGCAATCTTCGGGTGTTGAGCAATGGGCAGTCTTCGGGTGTTGAGCGATATTATGGGCTTGTCCAGAGATATTGTGTAGTGCATGTGCGAGCCATTTATCTTTTGTCGAAATATTTTTGTGAAATGTGTAATTGTTTTGTCCTGGCAATATGATGGTGATCTCACTTCATCCAATTTGTGAATTTGTGATTACACCACATGTGTACTGCCTGTTATTCAGTAAAATATACAGAGAGGAAGCTATGCTTCCTGCGACAAATGAGCAAATCATAAGTGATGATTCTTTCTG]
[+] EMBL CB663866 [ GCCTCGCCATCTCCGCGCCGCGGCCCAGATCCCTCCGGCGAGCGCCGCCGCCGCCACCGCCTCCGCCATGGACCGCCTCCGCGCGGGGAGCCCCGTCTACGGGCGGCAGCGGAGCGGCAGCAGCACGGGCTCCTCCTCCCCGGGCGGCGTCTCCCCGTCCCACCACCGCTCCTCCTCCACCTCCTCCGCCGCCTCCGCCGCCGCGGGGCTGGGCGGCGGCGTCTCCAACGTGCGCCGCACGCAGAACGTCGCGGCGCGGGCGGCCGCCGCGAGGCTGGCCCAGGTCATGGCGTCACAGAGCGCCGCGGCCGCCGCGGGCCGCGACGACGACGACGACGACGACGACTACGCCAATGACCACCCGCCCGCCCCTCCCCCCGCGAGGTTCGGCTCCGCGCGCCCCGCCGCGGCGCACGGCAGCAACGGCGTCTCGTTGCTCGGCCGCACCGCGAGATCTCCCTCCCCTGCGTTAGGTACGAACATTGTAGAGCCACCTCCTACTGTCCGCTCAACA ]
[+] EMBL CB631315 [ ggGCGCCGCGGCCGCCGCGGGCCGCGACGACGACGACGACGACGACGACTACGCCAATGACCACCCGCCCGCCCCTCCCCCCGCGAGGTTCGGCTCCGCGCGCCCCGCCGCGGCGCACGGCAGCAACGGCGTCTCGTTGCTCGGCCGCACCGCGAGATCTCCCTCCCCTGCGTTAGGTAGGAACATTGTAGAGCCACCTCCTACTGTCCGCTCAACATCAGCTGGGAGGCCTGCCGTTGCTTCACGGCCGACCACCACGGTGGTTCCACCGATCAAAACCAGCACGACATTGCGGACACCATCGCCTATTCCACCTGTGGCTGTGGAGCCTCCAGTGGACCGCAGTCGGCAGAAAAGGTTTGATACAGGGCATCTCAACTCCAGAGAATCAACACCAAAAAGGGAGGCGTCTGCACTTCAAGATGAGCTTGATATACTACAAGAGGAGAATGAGAGTGTTCTAGAAAAGCTACGACTTGCTGAAGAAAGATGTGAAGAAGCAGAAGCTAGAGCCAAGGAGCTTGAGAAACAGGTAGCTGCCCTTGGGGAAGGGGTATCATTAGAAGCTCGCCTCTTGAGCAGGAAAGAAGCTGCCCTTAAACAGAGGGAGGCTGCACTGAAGGCTGCAAGGGAATCAAAAGATGGTAAAGATGGGGAAGTGACAACACTAAAGCATGAACTGGATTGTGCCAAAGAAGAGGTTGTAACAGCTATGGAGCAGCTAAAGGAAGCAGAGACTGAAACAAAGGCCCTCCGGTCCATGACTCAGAGAATGATCTTAACCCAAGAGGAAATGGAAGAGGTGGTCCTTAAAAGGTGCTGGC ]
[+] EMBL OSS4078A [ GTTGCTCGGCCGCACCGCGAGATCTCCCTCCCCTGCGTTAGGTAGGAACATTGTAGAGCCACCTCCTACTGTCCGCTCAACATCAGCTGGGAGGCCTGCCGTTGCTTCACGGCCGACCACCACGGTGGTTCCACCGATCAAAACCAGCACGACATTGCGGACACCATCGCCTATTCCACCTGTGGCTGTGGAGCCTCCAGTGGACCGCAGTCGGCAGAAAAGGTTTGATACAGGGCATCTCAACTCCAG ]
[+] EMBL CA764225 [ GAATCAAAAGATGGTAAAGATGGGGAAGTGACAACACTAAAGCGTGAACTGGATTGTGCCAAAGAAGAGGTTGTAACAGCTATGGAGCAGCTAAAGGAAGCAGAGACTGAAACAAAGGCCCTCCGGTCCATGACTCAGAGAATGATCTTAACCCAAGAGGAAATGGAAGAGGTGGTCCTTAAAAGGTGCTGGCTTTCACGTTATTGGGGCTTAGCGGTTCAATACGCAGTTTATCCCGAGATTGCGGTATCAAAGCATGAACATTGGTCATCATTAGCTCCTCTTCCCCTTGAGGTTGTTCTCTCTGCTGGTCAAAAGGCTAAGGAGGAACCTCTCAAACAAGGTGAGGATGACGCCCAAAGGAGAAATAAACTTGTGCGAGATATGAGTGATGTAATGGGAGAAGGCAATATATAGAGAGCATGCTCTCAGTTGAAATGGGGCTTAGAGAGCTTTCATCATTGAAGGTGGAAGATGCTGTTGTGGTTGCACTTGGTCAACACCGGAGACCTAGTATAGTTCGGCAATTCACATCAGATTTTAAATCACCTGGTGAACCTAAATTCTTGGAGGCGTTTGATCTTAGCCATGAAGAGGCAGAAAGATGNTAGCTTTAAGCAGGCATGGCTTATATACTTCTGGAGAAGAGCTAAAACTCATGGCATTGAGGAAGACATTGCTGAAGAACGGCTTCAGTTCTGGATTGGTCGCAATGCAGTAGCCCC ACTTCTCATGATGCTATAGATGGGGAGCGGGGTCTAACAGAGCTCAAGAAACTGGGCATAGAGCAGCAACTGNGGGAAGGATCACGNGCAGANTTCGATGAANATTCATCGGCAATTGANAATACCTAGGCNCATCTCAAGGTTGGTTATGGGACATG ]
[-] EMBL CB663867 [ TGTAATGGGAGAAGGCA ATATAGAGAGCATGCTCTCAGTGAAAATGGGGCTTAGAGAGCTTTCATCATTGAAGGTGGAAGATGCTGTTGTGGTTGCACTTGGTCAACACCGGAGACCTAGTATAGTTCGGCAATTCACATCAGATTTTAAATCACCTGGTGAACCTAAATTCTTGGAGGCGTTTGATCTTAGCCATGAAGAGGCAG AAGATGTTAGCTTTAAGCAGGCATGGCTTATATACTTCTGGAGAAGAGCTAAAACTCATGGCATTGAGGAAGACATTGCTGAAGAACGGCTTCAGTTCTGGATTGGTCGCAATGCAGTAGCCCCAACTTCTCATGATGCTATAGATGTGGAGCGAGGTCTAACAGAGCTCAGGAAACTGGGCATAGAGCAGCAACTGTGGGAAGGATCACGTGCAGATATCGATGAAGATTCATCGGCAATTGAGAATCACTAGGCACATCTCAAGGTTGTTTATGGTACATGATTATTCCAATTTTGGAGAATGGAAATGCTTTTTCGCGGCTGGTCTTGGGCCATTGCCATCATTGGATCCCTGAATGGTGCTGCAATCTTCGGGTGTTGAGCAATGGGCAGTCTTCGGGTGTTGAGCGATATTATGGGCTTGTCCAGAGATATTGTGTAGTGCATGTGCGAGCCATTTATCTTTTGTCGAAATATTTTTGTGAAATGTGTAATTGTTTTGTCCTGGCAATATGATGGTGATCTCACTTCATCCAATTTGTGAATTTGTGATTACACCACATGTGTACTGCCTGTTATTCAGTAAAATATACAGAGAGGAAGCTATGCT ]
[-] EMBL CB631314 [ GGAAGATGCTGTTGTGGTTGCACTTGGTCAACACCGGAGACNTAGTATAGTTCGGCAATTCACATCAGATTTTAAATCACCTGGTGAACCTAAATTCTTGGAGGCGTTTGATCTTAGCCATGAAGAGGCAG AAGATGTTAGCTTTAAGCAGGCATGGCTTATATACTTCTGGAGAAGAGCTAAAACTCATGGCATTGAGGAAGACATTGCTGAAGAACGGCTTCAGTTCTGGATTGGTCGCAATGCAGTAGCCCCAACTTCTCATGATGCTATAGATGTGGAGCGAGGTCTAACAGAGCTCAGGAAACTGGGCATAGAGCAGCAACTGTGGGAAGGATCACGTGCAGATATCGATGAAGATTCATCGGCAATTGAGAATCACTAGGCACATCTCAAGGTTGTTTATGGTACATGATTATTCCAATTTTGGAGAATGGAAATGCTTTTTCGCGGCTGGTCTTGGGCCATTGCCATCATTGGATCCCTGAATGGTGCTGCAATCTTCGGGTGTTGAGCAATGGGCAGTCTTCGGGTGTTGAGCGATATTATGGGCTTGTCCAGAGAGATTGTGTAGTGCATGTGCGAGCCATTTATCTTTTGTCGAAATATTTTTGTGAAATGTGTAATTGTTTTGTCCTGGCAATATGATGGTGATCTCACTTCATCCAATTTGTGAATTTGTGATTACACCACATGTGTACTGCCTGTTATTCAGTAAAATATACAGAGAGGAAGCTATGCTTCCTGCGA ]
[-] EMBL CB641876 [ TTTAAATCACCTGGTGAACCTAAATTCTTGGAGGCGTTTGATCTTAGCCATGAAGAGGCAG AAGATGTTAGCTTTAAGCAGGCATGGCTTATATACTTCTGGAGAAGAGCTAAAACTCATGGCATTGAGGAAGACATTGCTGAAGAACGGCTTCAGTTCTGGATTGGTCGCAATGCAGTAGCCCCAACTTCTCATGATGCTATAGATGTGGAGCGAGGTCTAACAGAGCTCAGGAAACTGGGCATAGAGCAGCAACTGTGGGAAGGATCACGTGCAGATATCGATGAAGATTCATCGGCAATTGAGAATCACTAGGCACATCTCAAGGTTGTTTATGGTACATGATTATTCCAATTTTGGAGAATGGAAATGCTTTTTCGCGGCTGGTCTTGGGCCATTGCCATCATTGGATCCCTGAATGGTGCTGCAATCTTCGGGTGTTGAGCAATGGGCAGTCTTCGGGTGTTGAGCGATATTATGGGCTTGTCCAGAGATATTGTGTAGTGCATGTGCGAGCCATTTATCTTTTGTCGAAATATTTTTGTGAAATGTGTAATTGTTTTGTCCTGGCAATATGATGGTGATCTCACTTCATCCAATTTGTGAATTTGTGATTACACCACATGTGTACTGCCTGTTATTCAGTAAAAAAGACAGAGAGGAAGCTATGtt ]
consensusID : consensus_14137#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 664 fasta sequence
[CTGCCCTTAAACAGAGGGAGGCTGCACTGAAGGCTGCAAGGGAATCAAAAGATGGTAAAGATGGGGAAGTGACAACACTAAAGCATGAACTGGATTGTGCCAAAGAAGAGGTTGTAACAGCTATGGAGCAGCTAAAGGAAGCAGAGACTGAAACAAAGGCCCTCCGGTCCATGACTCAGAGAATGATCTTAACCCAAGAGGAAATGGAAGAGGTGGTCCTTAAAAGGTGCTGGCTTTCACGTTATTGGGGCTTAGCGGTTCAATACGGAGTTTATCCCGAGATTGCGGTATCAAAGCATGAACATTGGTCATCATTAGCTCCTCTTCCCCTTGAGGTTGTTCTCTCTGCTGGTCAAAAGGCTAAGGAGGAACCTCTCAAACAAGGTGAGGATGACGCCCAAAGGAGAAATAAACTTGTGCGAGATATGAGTGATGTAATGGGAGAAGGCAATATAGAGAGCATGCTCTCAGTTGAAATGGGGCTTAAAGAGCTTTCATCATTGAAGTGGAAGATGCTGTGTGGTTCACTTGGCAACACCGGAACTATNTAGTCGGAATTACATAGATTTAATACTGGGACCTAATCTTGAGCNTGACTACATAAAGCAAAATTANTTACAGCTGGTTTCTTGAAAACTACTATGATNGAAATGTAACGTTATTG]
[+] EMBL BP184393 [CTGCCCTTAAACAGAGGGAGGCTGCACTGAAGGCTGCAAGGGAATCAAAAGATGGTAAAGATGGGGAAGTGACAACACTAAAGCATGAACTGGATTGTGCCAAAGAAGAGGTTGTAACAGCTATGGAGCAGCTAAAGGAAGCAGAGACTGAAACAAAGGCCCTCCGGTCCATGACTCAGAGAATGATCTTAACCCAAGAGGAAATGGAAGAGGTGGTCCTTAAAAGGTGCTGGCTTTCACGTTATTGGGGCTTAGCGGTTCAATACGGAGTTTATCCCGAGATTGCGGTATCAAAGCATGAACATTGGTCATCATTAGCTCCTCTTCCCCTTGAGGTTGTTCTCTCTGCTGGTCAAAAGGCTAAGGAGGAACCTCTCAAACAAGGTGAGGATGACGCCCAAAGGAGAAATAAACTTGTGCGAGATATGAGTGATGTAATGGGAGAAGGCAATATAGAGAGCATGCTCTCAGTTGAAATGGGGCTTAAAGAGCTTTCATCATTGAAGTGGAAGATGCTGTGTGGTTCACTTGGCAACACCGGAACTATNTAGTCGGAATTACATAGATTTAATACTGGGACCTAATCTTGAGCNTGACTACATAAAGCAAAATTANTTACAGCTGGTTTCTTGAAAACTACTATGATNGAAATGTAACGTTATTG]
consensusID : consensus_14137#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 603 fasta sequence
[GAGCTAAAACTCATGGCATTGAGGAAGACATTGCTGAAGAACGGCTTCAGTTCTGGATTGGTCGCAATGCAGTAGCCCCAACTTCTCATGATGCTATAGATGTGGAGCGAGGTCTAACAGAGCTCAGGAAACTGGGCATAGAGCAGCAACTGTGGGAAGGATCACGTGCAGATATCGATGAAGATTCATCGGCAATTGAGAATCACTAGGCACATCTCAAGGTTGTTTATGGTACATGATTATTCCAATTTTGGAGAATGGAAATGCTTTTTCGCGGCTGGTCTTGGGCCATTGCCATCATTGGATCCCTGAATGGTGCTGCAATCTTCGGGTGTTGAGCAATGGGCAGTCTTCGGGTGTTGAGCGAT-ATTATGGGCTTGTCCAGAGATATTGTGTAGTGCATGTGCGAGCCATTTATCTTTTGTCGAAATATTTTTGTGAAATGTGTAATTGTTTTGTCCTGGCAATATGATGGTGATCTC-ACTTCATCCAATTTGTGAATTTGTGATTACACCACATGTGTACTGCCTGTTATTCAGTAAAATATACAGAGAGGAAGCTATGCTTCCTGCGACAAATGAGCAAA--AAAAAAAAAAAAAAAAA]
[+] EMBL BP184394 [GAGCTAAAACTCATGGCATTGAGGAAGACATTGCTGAAGAACGGCTTCAGTTCTGGATTGGTCGCAATGCAGTAGCCCCAACTTCTCATGATGCTATAGATGTGGAGCGAGGTCTAACAGAGCTCAGGAAACTGGGCATAGAGCAGCAACTGTGGGAAGGATCACGTGCAGATATCGATGAAGATTCATCGGCAATTGAGAATCACTAGGCACATCTCAAGGTTGTTTATGGTACATGATTATTCCAATTTTGGAGAATGGAAATGCTTTTTCGCGGCTGGTCTTGGGCCATTGCCATCATTGGATCCCTGAATGGTGCTGCAATCTTCGGGTGTTGAGCAATGGGCAGTCTTCGGGTGTTGAGCGAT ATTATGGGCTTGTCCAGAGATATTGTGTAGTGCATGTGCGAGCCATTTATCTTTTGTCGAAATATTTTTGTGAAATGTGTAATTGTTTTGTCCTGGCAATATGATGGTGATCTC ACTTCATCCAATTTGTGAATTTGTGATTACACCACATGTGTACTGCCTGTTATTCAGTAAAATATACAGAGAGGAAGCTATGCTTCCTGCGACAAATGAGCAAA AAAAAAAAAAAAA ]
[-] EMBL CB677865 [ TTCAGTTCTGGATAGGTCGCAAGGCAGTAGCCCCAACTTGTCATGATGCTATGGATGTGGAGCGAGGTATAACAGAGCTCAGGAAACTGGGCATAGAGCAGCAACTGTGGGAAGGATCCCGTGCAGATATGGATGAAGATTCATCGGCAATTGAGAATCACTAGGCACATTTCAAGGTTGTTTATGGTACATGATTATTCCAATTTTGGAGAATGGAAATGCTTTTTGGCGGCTGGTCTTGGGCCATTGCCATCATTGGATCCTTGAATGGTGCTGCAATCTTCGGGTGTTGAGCAATGGGCAGTCTTCGGGTGTTGATCGATCATTATGGGCTTGTCCAGAGATATTGTGTAGTGCATGTGCGAGCCATTTATCTTTTGTCGAAATAT ]
[+] EMBL AU174313 [ GATATCGATGAAGATTCATCGGCAATTGAGAATCNCTAGGCACATNTCAAGGTTGTTTATGGTACATGATTATTCCAATTTTGGAGAATGGAAATGCTTTTTCGCGGCTGGTCTTGGGCCATTGCCATCATTGGATCCCTGAATGGTGCTGCAATNTTCGGGTGTTGAGCAATGGGCAGTNTTCGGGTGTTGAGCGAT ATTATGGGCTTGTCCANAGATATTGTGTAGTGCATGTGCGAGCCATTTATCTTTTGTCGAAATATTTTTGTGAAATGTGTAATTGTTTTGTCCTGGCAATATGATGGTGATNTC ACTTCATCCAATTTGTGAATTTGTGATTACNCCACATGTGTACTGCCTGTTATTCAGTAAAATATACAGAGAGGAAGCTATGCTTCCTGCGACAAATGAGCNAATCAAAAAAAAAAAAAAAAA]
[-] EMBL OS38023 [ TGTAGTGCATGTGCGAGCCATTTATCTTTTGTCGAAACACTTCTGTGAAATGTGTAATTGGTCTGTCCTGGCAATATGATGGTGATCTCAACTTCATC ]
consensusID : consensus_14137#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 333 fasta sequence
[GCCGAATTCGGCACGAGCTCAACTCCAGAGANTCAACACCNTAAAAGGGAGGCGTCTGCACTTCAAGATGAGCTTGATATACTACAAGAGGAGAATGAGAGTGTTCTANAAAAGCTACGACTTGCTGAAGAAAGATGTGAANAAGCNNAAGCTAGAGCCAAGGAGCTTGAGAAACNGGTNNCTGCCCTTGGGGAAGGGGTNTCNTTAGAAGCTCGCCTCTTGAGCAGGAAAGAACTGCCCTTAAACAGAGGGAGGCTGCACTGAAGGCTGCNAGGGANTCNNNAGATGGTAANGATGAAGAACAANATGATGTCTTTTGCNATAATGATTCNA]
[+] EMBL BE228903 [GCCGAATTCGGCACGAGCTCAACTCCAGAGANTCAACACCNTAAAAGGGAGGCGTCTGCACTTCAAGATGAGCTTGATATACTACAAGAGGAGAATGAGAGTGTTCTANAAAAGCTACGACTTGCTGAAGAAAGATGTGAANAAGCNNAAGCTAGAGCCAAGGAGCTTGAGAAACNGGTNNCTGCCCTTGGGGAAGGGGTNTCNTTAGAAGCTCGCCTCTTGAGCAGGAAAGAACTGCCCTTAAACAGAGGGAGGCTGCACTGAAGGCTGCNAGGGANTCNNNAGATGGTAANGATGAAGAACAANATGATGTCTTTTGCNATAATGATTCNA]
consensusID : consensus_14137#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 202 fasta sequence
[AGGGTTGTTTATGGTACATGAGTTATTCCCATTTTGGAGAATGGAAATGCGTTTTTCGCGGCTGGTCTTGGGCCCATTGCCCATCNATTGGATCCCTGAATGGNGCTGCCAATTTTCGGGGGTTGACACCATGGCGCAGATCTTCGGGTGTTGAGCGATATTATGGGCTNGGTCCACGAGATATTGTGTAGTGGCACTGTGG]
[+] EMBL BI806414 [AGGGTTGTTTATGGTACATGAGTTATTCCCATTTTGGAGAATGGAAATGCGTTTTTCGCGGCTGGTCTTGGGCCCATTGCCCATCNATTGGATCCCTGAATGGNGCTGCCAATTTTCGGGGGTTGACACCATGGCGCAGATCTTCGGGTGTTGAGCGATATTATGGGCTNGGTCCACGAGATATTGTGTAGTGGCACTGTGG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_14137#1 ------------------------------------------------------------
consensus_14137#3 ------------------------------------------------------------
consensus_14137#0 CCCACTTCTCAACCTCGCCTCGCCATCTCCGCGCCGCGGCCCAGATCCCTCCGGCGAGCG 60
consensus_14137#2 ------------------------------------------------------------
consensus_14137#4 ------------------------------------------------------------
consensus_14137#1 ------------------------------------------------------------
consensus_14137#3 ------------------------------------------------------------
consensus_14137#0 CCGCCGCCGCCACCGCCTCCGCCATGGACCGCCTCCGCGCGGGGAGCCCCGTCTACGGGC 120
consensus_14137#2 ------------------------------------------------------------
consensus_14137#4 ------------------------------------------------------------
consensus_14137#1 ------------------------------------------------------------
consensus_14137#3 ------------------------------------------------------------
consensus_14137#0 GGCAGCGGAGCGGCAGCAGCACGGGCTCCTCCTCCCCGGGCGGCGTCTCCCCGTCCCACC 180
consensus_14137#2 ------------------------------------------------------------
consensus_14137#4 ------------------------------------------------------------
consensus_14137#1 ------------------------------------------------------------
consensus_14137#3 ------------------------------------------------------------
consensus_14137#0 ACCGCTCCTCCTCCACCTCCTCCGCCGCCTCCGCCGCCGCGGGGCTGGGCGGCGGCGTCT 240
consensus_14137#2 ------------------------------------------------------------
consensus_14137#4 ------------------------------------------------------------
consensus_14137#1 ------------------------------------------------------------
consensus_14137#3 ------------------------------------------------------------
consensus_14137#0 CCAACGTGCGCCGCACGCAGAACGTCGCGGCGCGGGCGGCCGCCGCGAGGCTGGCCCAGG 300
consensus_14137#2 ------------------------------------------------------------
consensus_14137#4 ------------------------------------------------------------
consensus_14137#1 ------------------------------------------------------------
consensus_14137#3 ------------------------------------------------------------
consensus_14137#0 TCATGGCGTCACAGAGCGCCGCGGCCGCCGCGGGCCGCGACGACGACGACGACGACGACG 360
consensus_14137#2 ------------------------------------------------------------
consensus_14137#4 ------------------------------------------------------------
consensus_14137#1 ------------------------------------------------------------
consensus_14137#3 ------------------------------------------------------------
consensus_14137#0 ACTACGCCAATGACCACCCGCCCGCCCCTCCCCCCGCGAGGTTCGGCTCCGCGCGCCCCG 420
consensus_14137#2 ------------------------------------------------------------
consensus_14137#4 ------------------------------------------------------------
consensus_14137#1 ------------------------------------------------------------
consensus_14137#3 ------------------------------------------------------------
consensus_14137#0 CCGCGGCGCACGGCAGCAACGGCGTCTCGTTGCTCGGCCGCACCGCGAGATCTCCCTCCC 480
consensus_14137#2 ------------------------------------------------------------
consensus_14137#4 ------------------------------------------------------------
consensus_14137#1 ------------------------------------------------------------
consensus_14137#3 ------------------------------------------------------------
consensus_14137#0 CTGCGTTAGGTAGGAACATTGTAGAGCCACCTCCTACTGTCCGCTCAACATCAGCTGGGA 540
consensus_14137#2 ------------------------------------------------------------
consensus_14137#4 ------------------------------------------------------------
consensus_14137#1 ------------------------------------------------------------
consensus_14137#3 ------------------------------------------------------------
consensus_14137#0 GGCCTGCCGTTGCTTCACGGCCGACCACCACGGTGGTTCCACCGATCAAAACCAGCACGA 600
consensus_14137#2 ------------------------------------------------------------
consensus_14137#4 ------------------------------------------------------------
consensus_14137#1 ------------------------------------------------------------
consensus_14137#3 ------------------------------------------------------------
consensus_14137#0 CATTGCGGACACCATCGCCTATTCCACCTGTGGCTGTGGAGCCTCCAGTGGACCGCAGTC 660
consensus_14137#2 ------------------------------------------------------------
consensus_14137#4 ------------------------------------------------------------
consensus_14137#1 ------------------------------------------------------------
consensus_14137#3 ------------------------------------------------------------
consensus_14137#0 GGCAGAAAAGGTTTGATACAGGGCATCTCAACTCCAGAGAATCAACACCAAAAAGGGAGG 720
consensus_14137#2 ------------------------------------------------------------
consensus_14137#4 ------------------------------------------------------------
consensus_14137#1 ------------------------------------------------------------
consensus_14137#3 ------------------------------------------------------------
consensus_14137#0 CGTCTGCACTTCAAGATGAGCTTGATATACTACAAGAGGAGAATGAGAGTGTTCTAGAAA 780
consensus_14137#2 ------------------------------------------------------------
consensus_14137#4 ------------------------------------------------------------
consensus_14137#1 ------------------------------------------------------------
consensus_14137#3 ------------------------------------------------------------
consensus_14137#0 AGCTACGACTTGCTGAAGAAAGATGTGAAGAAGCAGAAGCTAGAGCCAAGGAGCTTGAGA 840
consensus_14137#2 ------------------------------------------------------------
consensus_14137#4 ------------------------------------------------------------
consensus_14137#1 ------------------------------------------------------------
consensus_14137#3 ------------------------------------------------------------
consensus_14137#0 AACAGGTAGCTGCCCTTGGGGAAGGGGTATCATTAGAAGCTCGCCTCTTGAGCAGGAAAG 900
consensus_14137#2 ------------------------------------------------------------
consensus_14137#4 ------------------------------------------------------------
consensus_14137#1 ---CTGCCCTTAAACAGAGGGAGGCTGCACTGAAGGCTGCAAGGGAATCAAAAGATGGTA 57
consensus_14137#3 ------------------------------------------------------------
consensus_14137#0 AAGCTGCCCTTAAACAGAGGGAGGCTGCACTGAAGGCTGCAAGGGAATCAAAAGATGGTA 960
consensus_14137#2 ------------------------------------------GAGCTAAAACTCATGGCA 18
consensus_14137#4 ------------------------------------------------------------
consensus_14137#1 AAGATGGGGAAGTGACAACACTAAAGCATGAACTGGATTGTGCCAAAGAAGAGGTTGTAA 117
consensus_14137#3 ------------------------------------------------------------
consensus_14137#0 AAGATGGGGAAGTGACAACACTAAAGCATGAACTGGATTGTGCCAAAGAAGAGGTTGTAA 1020
consensus_14137#2 TTGAGGAAGACATTGCTGAAGAACGGCTTCAGTTCTGGATTGGTCGCAATGCAGTAGCCC 78
consensus_14137#4 ------------------------------------------------------------
consensus_14137#1 CAGCTATGGAGCAGCTAAAGGAAGCAGAGACTGAAACAAAGGCCCTCCGGTCCATGACTC 177
consensus_14137#3 ------------------------------------------------------------
consensus_14137#0 CAGCTATGGAGCAGCTAAAGGAAGCAGAGACTGAAACAAAGGCCCTCCGGTCCATGACTC 1080
consensus_14137#2 CAACTTCTCATGATGCTATAGATGTGGAGCGAGGTCTAACAGAGCTCAGGAAACTGGGCA 138
consensus_14137#4 ------------------------------------------------------------
consensus_14137#1 AGAGAATGATCTTAACCCAAGAGGAAATGGAAGAGGTGGTCCTTAAAAGGTGCTGGCTTT 237
consensus_14137#3 ------------------------------------------------------------
consensus_14137#0 AGAGAATGATCTTAACCCAAGAGGAAATGGAAGAGGTGGTCCTTAAAAGGTGCTGGCTTT 1140
consensus_14137#2 TAGAGCAGCAACTGTGGGAAGGATCACGTGCAGATATCGATGAAGATTCATCGGCAATTG 198
consensus_14137#4 ------------------------------------------------------------
consensus_14137#1 CACGTTATTGGGGCTTAGCGGTTCAATACGGAGTTTATCCCGAGA----TTGCGGTATCA 293
consensus_14137#3 ---------------------------GCCGAATTCGGCACGAGC----T--CAACTCCA 27
consensus_14137#0 CACGTTATTGGGGCTTAGCGGTTCAATACGGAGTTTATCCCGAGA----TTGCGGTATCA 1196
consensus_14137#2 AGAATCACTAGGC----ACATCTCAAGGTTGTTTATGGTACATGA-TTATTCCAATTTTG 253
consensus_14137#4 ------------------------AGGGTTGTTTATGGTACATGAGTTATTCCCATTTTG 36
* * * * * *
consensus_14137#1 AAGCATGAACATTGGTCATCATTAGCTCCTCTTCCCCTTGAGGTT-GTTCTCTCTGCTGG 352
consensus_14137#3 GAGANTCAACACCN--TAAAAGGGAGGCGTCTGCACTTCAAGATGAGCTTGATATACTA- 84
consensus_14137#0 AAGCATGAACATTGGTCATCATTAGCTCCTCTTCCCCTTGAGGTT-GTTCTCTCTGCTGG 1255
consensus_14137#2 GAGAATGGAAATGC-TTTTTCGCGGCTGGTCTTGGGCC-ATTGCCA--TCATTGGATCC- 308
consensus_14137#4 GAGAATGGAAATGCGTTTTTCGCGGCTGGTCTTGGGCCCATTGCCCATCNATTGGATCC- 95
** * * * *** *
consensus_14137#1 TCAAAAGGCTAAGGAGGAACCTCTCA----AACAAGGTGAGGATGACGCCCAAAGGAGAA 408
consensus_14137#3 -CAAGAGGAGAATGAGAGTGTTCTAN----AA-AAGCTACGACT--TGCTGAAGAAAGAT 136
consensus_14137#0 TCAAAAGGCTAAGGAGGAACCTCTCA----AACAAGGTGAGGATGACGCCCAAAGGAGAA 1311
consensus_14137#2 -CTGAATGGTGCTGC-AATCTTCGGGTGTTGA-GCAATGG-GCAG-TCTTCGGGTGTTGA 363
consensus_14137#4 -CTGAATGGNGCTGCCAATTTTCGGGGGTTGACACCATGGCGCAGATCTTCGGGTGTTGA 154
* * * * ** * *
consensus_14137#1 ATAAACTTGTGCGAGATATGAGTGATGTAATGGGAGAAGGCAATATAGAGAGCATGCTCT 468
consensus_14137#3 GTGAANAAGCNNAAGCTA-GAGCCAAGGAGCTTGAGAAACNGGTNNC-------TGCCCT 188
consensus_14137#0 ATAAACTTGTGCGAGATATGAGTGATGTAATGGGAGAAGGCAATATAGAGAGCATGCTCT 1371
consensus_14137#2 GCGATATTATGGGCTTG-TCCA-GAGATATTGTGTAGTGCATGTGCGAGCCATTTATCTT 421
consensus_14137#4 GCGATATTATGGGCTNGGTCCACGAGATATTGTGTAGTGGCACTGTGG------------ 202
* * * * *
consensus_14137#1 CAGTTGAAATGGGGCTTAAAGAGCTTTCATCATTGA-AGTGGAAGATGCTGTGTGGTT-- 525
consensus_14137#3 TGGGGAAGGGGTNTCNTTAGAAGCTCGCCTC-TTGA-GCAGGAAAGAACTG--------- 237
consensus_14137#0 CAGTTGAAATGGGGCTTAGAGAGCTTTCATCATTGAAGGTGGAAGATGCTGTTGTGGTTG 1431
consensus_14137#2 TTGTCGAAATATTTTTGTGAAATGTGTAATTGTTTTGTCCTGGCAATATGATGGTGATCT 481
consensus_14137#4 ------------------------------------------------------------
consensus_14137#1 CACTTGG-CAACACCGGAACTATNTAGTCGG--AATTACATAGATTTAATACTGGGACCT 582
consensus_14137#3 CCCTTA---AACAGAGGGAGGCTGCACTGAA--GGCTGCNAGGG---ANTCNNNAGA--- 286
consensus_14137#0 CACTTGGTCAACACCGGAGACCTAGTATAGTTCGGCAATTCACATC-AGATTTTAAATCA 1490
consensus_14137#2 CACTTCATCCAATTTGTGAATTTGTGATTAC---ACCACATGTGTACTGCCTGTTATT-- 536
consensus_14137#4 ------------------------------------------------------------
consensus_14137#1 AATCTTGAGCNTGACTACATA-AAGCAAAATTANTTACAGCTGGTTTCTTGAAAACTACT 641
consensus_14137#3 --TGGTAANGATGAAGA-ACA-ANATGATGTCTTTTGCNA-TAATGATTCNA-------- 333
consensus_14137#0 CCTGGTGAACCTAAATTCTTGGAGGCGTTTGATCTTAGCCATGAAGAGGCAGAAGATGTT 1550
consensus_14137#2 --CAGTAAAATATACAGAGAGGAAGCTATGCTTCCTGCGACAAATGAGCAAAAAAAAAAA 594
consensus_14137#4 ------------------------------------------------------------
consensus_14137#1 ATGATNGAAATGTAACGTTATTG------------------------------------- 664
consensus_14137#3 ------------------------------------------------------------
consensus_14137#0 AGCTTTAAGCAGGCATGGCTTATATACTTCTGGAGAAGAGCTAAAACTCATGGCATTGAG 1610
consensus_14137#2 AAAAAAAAA--------------------------------------------------- 603
consensus_14137#4 ------------------------------------------------------------
consensus_14137#1 ------------------------------------------------------------
consensus_14137#3 ------------------------------------------------------------
consensus_14137#0 GAAGACATTGCTGAAGAACGGCTTCAGTTCTGGATTGGTCGCAATGCAGTAGCCCCAACT 1670
consensus_14137#2 ------------------------------------------------------------
consensus_14137#4 ------------------------------------------------------------
consensus_14137#1 ------------------------------------------------------------
consensus_14137#3 ------------------------------------------------------------
consensus_14137#0 TCTCATGATGCTATAGATGTGGAGCGAGGTCTAACAGAGCTCAGGAAACTGGGCATAGAG 1730
consensus_14137#2 ------------------------------------------------------------
consensus_14137#4 ------------------------------------------------------------
consensus_14137#1 ------------------------------------------------------------
consensus_14137#3 ------------------------------------------------------------
consensus_14137#0 CAGCAACTGTGGGAAGGATCACGTGCAGATATCGATGAAGATTCATCGGCAATTGAGAAT 1790
consensus_14137#2 ------------------------------------------------------------
consensus_14137#4 ------------------------------------------------------------
consensus_14137#1 ------------------------------------------------------------
consensus_14137#3 ------------------------------------------------------------
consensus_14137#0 CACTAGGCACATCTCAAGGTTGTTTATGGTACATGATTATTCCAATTTTGGAGAATGGAA 1850
consensus_14137#2 ------------------------------------------------------------
consensus_14137#4 ------------------------------------------------------------
consensus_14137#1 ------------------------------------------------------------
consensus_14137#3 ------------------------------------------------------------
consensus_14137#0 ATGCTTTTTCGCGGCTGGTCTTGGGCCATTGCCATCATTGGATCCCTGAATGGTGCTGCA 1910
consensus_14137#2 ------------------------------------------------------------
consensus_14137#4 ------------------------------------------------------------
consensus_14137#1 ------------------------------------------------------------
consensus_14137#3 ------------------------------------------------------------
consensus_14137#0 ATCTTCGGGTGTTGAGCAATGGGCAGTCTTCGGGTGTTGAGCGATATTATGGGCTTGTCC 1970
consensus_14137#2 ------------------------------------------------------------
consensus_14137#4 ------------------------------------------------------------
consensus_14137#1 ------------------------------------------------------------
consensus_14137#3 ------------------------------------------------------------
consensus_14137#0 AGAGATATTGTGTAGTGCATGTGCGAGCCATTTATCTTTTGTCGAAATATTTTTGTGAAA 2030
consensus_14137#2 ------------------------------------------------------------
consensus_14137#4 ------------------------------------------------------------
consensus_14137#1 ------------------------------------------------------------
consensus_14137#3 ------------------------------------------------------------
consensus_14137#0 TGTGTAATTGTTTTGTCCTGGCAATATGATGGTGATCTCACTTCATCCAATTTGTGAATT 2090
consensus_14137#2 ------------------------------------------------------------
consensus_14137#4 ------------------------------------------------------------
consensus_14137#1 ------------------------------------------------------------
consensus_14137#3 ------------------------------------------------------------
consensus_14137#0 TGTGATTACACCACATGTGTACTGCCTGTTATTCAGTAAAATATACAGAGAGGAAGCTAT 2150
consensus_14137#2 ------------------------------------------------------------
consensus_14137#4 ------------------------------------------------------------
consensus_14137#1 ---------------------------------------------
consensus_14137#3 ---------------------------------------------
consensus_14137#0 GCTTCCTGCGACAAATGAGCAAATCATAAGTGATGATTCTTTCTG 2195
consensus_14137#2 ---------------------------------------------
consensus_14137#4 ---------------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||