cluster # 14143

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Oryza sativa
cluster # 14143 cluster # 14143 Sequences # 15 consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_14143#0 length = 2062 sequences # 6
consensus_14143#1 length = 830 sequences # 4

consensus_14143#2 length = 694 sequences # 1
consensus_14143#3 length = 636 sequences # 1
consensus_14143#4 length = 609 sequences # 3

consensusID : consensus_14143#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 2062
fasta sequence

                              [CGCCTCCCCGCCGCAGTAGCAGAGTCGCCCGCCGCCGCGCATCCGCATGGCAGCTGCTCAAGGTAGCAGCGTTGTCCCATCCTCTGCGAAAGTTGACTTTTTAAAGCTCCAGAATGGCAGTGATATTCGTGGTGTTGCTGTTGGTGGGGTCGAAGGCGAGCCCGTAAATCTCACTGAGCCTGTTACTGAAGCAATAGCTTCTGCATTTGCTGCATGGTTATTAAACAAGAAGAAAGCGGATGGATGGAGACGTTTAAGAATTTCTGTTGGACATGATTCTCGAATTTCTGCACATAAATTGCAGGATGCAGTTACTCTTGGAATTACCACTGCAGGGCATGATGTTTTACAATTTGGATTGGCTTCAACACCAGCAATGTTCAACAGTACACTTACAGAAGATGAGATAAATCATTGCCCAGTTGATGGAGCCATAATGATAACAGCAAGTCATCTTCCATACAACCGGAATGGTCTCAAATTTTTTACAAGTGCCGGTGGTTTGAATAAGGCTGATATCAAAGATATCTTGGAGCGCGCTTCTAGAATATATGAGGACTCTTCTCATGGTAGCACACAAGAATTAGAGCAAGCTTCGAAGGGAGAAGTGAGTAATGTCGATTACATGTCAATTTATGCATCCGATCTTGTGAAAGCAGTTCGTAAATCTGCTGGAAACAAAGAAAAACCACTGGAGGGACTGCACATAGTCGTGGATGCAGGGAATGGAGCAGGTGGCTTTTTTGTGGATAAGGTACTCAAGCCGTTAGGCGCTATTACTACTGGGAGCCAATTCCTAGAGCCTGATGGCATGTTTCCAAATCACATTCCAAATCCTGAGGACAAAACTGCAATGAAAGCCATTACACAAGCTGTGGCCGATAACAAGGCAGACTTGGGCATCATATTTGATACTGATGTTGACAGGTCTGCTGCTGTTGATTCAAGTGGTCGTGAGTTAAACCGTAACAGATTGATTGCTTTGATGTCTGCCATAGTTCTTGAAGAGCACCCAGGCACTACAATTGTGACAGATAGCGTGACTTCTGATGGGCTGACTACATTTATTGAAAATAAACTTGGAGGGAAGCATCATCGTTTCAAGCGAGGGTACAAGAATGTAATAGATGAGGCTATTCGTCTGAATACTATTGGTGAGGAGTCACATTTAGCTATGGAAACAAGTGGCCATGGAGCACTGAAAGAGAATCACTGGCTCGATGATGGTGCATATCTTATGGTTAAACTTTTGAATAAGCTTGCTGCAGCTAGAATATTGAATCCAAACGTTGGTAGTAAAGTTTTGACTGATTTGGTCGAGGGCCTTGAGGAGGCTTCTGTGACAGTGGAGATAAGATTGAAGATTGATCAGAATCATGCAGATTTGAAAGGGGGGTCCTTCCGTGATTACGGAGAAGCTGTCTTGAAACATTTGGAGAATGCAATCAGTAAAGATGAATATCTGTGCAAAGCACCGAAGAACTATGAAGGCGTAAGAGTTTCAGGATATGGTGGCTGGTTCTTATTGCGGTTATCCCTCCATGACCCAGTTCTTCCCCTTAACATCGAGGCGCCGAGCAAGGATGATGCCATTAAGCTTGGGCTTGCAGTGCTTACTGCCGTAAGTGAATTTCCAGCATTGGACATAACGGCATTGAACAAGTTTTTGCAGCAGTGATGGAAGTATTGCGGCGGCGACGATAATCTGCAGCCATCACATGCCTTTGTTGAGCTGGGATGAGAGAAACGCACCACAGTACTATACATAGACGTACTTGCATTCAGGCTTACACATAATATTACATGGTTTTGACTTTTCGGCTTTACTTGGTCTTTGTTTGGTATGGAAATGTCAAACAAGGAAGACTAATTTTCGTGTTTTAAAGAAAATATACAAAGTAGTTGTCAGGAATCTTATATACCATCGTCAATGTGTTTTCGGATTGCTTATATCGTCATCAGAGTGCTGTGAAGGCAGTCGGTTTTCGGAACGATGTTATCATCAAATGAAAATATTTCATGTTTCTGTTGTCTTGCTCGTATAAATTTTCATGGTTATTGG]

[+] EMBL AK064872             [CGCCTCCCCGCCGCAGTAGCAGAGTCGCCCGCCGCCGCGCATCCGCATGGCAGCTGCTCAAGGTAGCAGCGTTGTCCCATCCTCTGCGAAAGTTGACTTTTTAAAGCTCCAGAATGGCAGTGATATTCGTGGTGTTGCTGTTGGTGGGGTCGAAGGCGAGCCCGTAAATCTCACTGAGCCTGTTACTGAAGCAATAGCTTCTGCATTTGCTGCATGGTTATTAAACAAGAAGAAAGCGGATGGATGGAGACGTTTAAGAATTTCTGTTGGACATGATTCTCGAATTTCTGCACATAAATTGCAGGATGCAGTTACTCTTGGAATTACCACTGCAGGGCATGATGTTTTACAATTTGGATTGGCTTCAACACCAGCAATGTTCAACAGTACACTTACAGAAGATGAGATAAATCATTGCCCAGTTGATGGAGCCATAATGATAACAGCAAGTCATCTTCCATACAACCGGAATGGTCTCAAATTTTTTACAAGTGCCGGTGGTTTGAATAAGGCTGATATCAAAGATATCTTGGAGCGCGCTTCTAGAATATATGAGGACTCTTCTCATGGTAGCACACAAGAATTAGAGCAAGCTTCGAAGGGAGAAGTGAGTAATGTCGATTACATGTCAATTTATGCATCCGATCTTGTGAAAGCAGTTCGTAAATCTGCTGGAAACAAAGAAAAACCACTGGAGGGACTGCACATAGTCGTGGATGCAGGGAATGGAGCAGGTGGCTTTTTTGTGGATAAGGTACTCAAGCCGTTAGGCGCTATTACTACTGGGAGCCAATTCCTAGAGCCTGATGGCATGTTTCCAAATCACATTCCAAATCCTGAGGACAAAACTGCAATGAAAGCCATTACACAAGCTGTGGCCGATAACAAGGCAGACTTGGGCATCATATTTGATACTGATGTTGACAGGTCTGCTGCTGTTGATTCAAGTGGTCGTGAGTTAAACCGTAACAGATTGATTGCTTTGATGTCTGCCATAGTTCTTGAAGAGCACCCAGGCACTACAATTGTGACAGATAGCGTGACTTCTGATGGGCTGACTACATTTATTGAAAATAAACTTGGAGGGAAGCATCATCGTTTCAAGCGAGGGTACAAGAATGTAATAGATGAGGCTATTCGTCTGAATACTATTGGTGAGGAGTCACATTTAGCTATGGAAACAAGTGGCCATGGAGCACTGAAAGAGAATCACTGGCTCGATGATGGTGCATATCTTATGGTTAAACTTTTGAATAAGCTTGCTGCAGCTAGAATATTGAATCCAAACGTTGGTAGTAAAGTTTTGACTGATTTGGTCGAGGGCCTTGAGGAGGCTTCTGTGACAGTGGAGATAAGATTGAAGATTGATCAGAATCATGCAGATTTGAAAGGGGGGTCCTTCCGTGATTACGGAGAAGCTGTCTTGAAACATTTGGAGAATGCAATCAGTAAAGATGAATATCTGTGCAAAGCACCGAAGAACTATGAAGGCGTAAGAGTTTCAGGATATGGTGGCTGGTTCTTATTGCGGTTATCCCTCCATGACCCAGTTCTTCCCCTTAACATCGAGGCGCCGAGCAAGGATGATGCCATTAAGCTTGGGCTTGCAGTGCTTACTGCCGTAAGTGAATTTCCAGCATTGGACATAACGGCATTGAACAAGTTTTTGCAGCAGTGATGGAAGTATTGCGGCGGCGACGATAATCTGCAGCCATCACATGCCTTTGTTGAGCTGGGATGAGAGAAACGCACCACAGTACTATACATAGACGTACTTGCATTCAGGCTTACACATAATATTACATGGTTTTGACTTTTCGGCTTTACTTGGTCTTTGTTTGGTATGGAAATGTCAAACAAGGAAGACTAATTTTCGTGTTTTAAAGAAAATATACAAAGTAGTTGTCAGGAATCTTATATACCATCGTCAATGTGTTTT                                                                                                                           ]
[+] EMBL CB656953             [CGCCTCCCCGCCGCAGTAGCAGAGTCGCCCGCCGCCGCGCATCCGCATGGCAGCTGCTCAAGGTAGCAGCGTTGTCCCATCCTCTGCGAAAGTTGACTTTTTAAAGCTCCAGAATGGCAGTGATATTCGTGGTGTTGCTGTTGGTGGGGTCGAAGGCGAGCCCGTAAATCTCACTGAGCCTGTTACTGAAGCAATAGCTTCTGCATTTGCTGCATGGTTATTAAACAAGAAGAAAGCGGATGGATGGAGACGTTTAAGAATTTCTGTTGGACATGATTCTCGAATTTCTGCACATAAATTGCAGGATGCAGTTACTCTTGGAATTACCACTGCAGGGCATGATGTTTTACAATTTGGATTGGCTTCAACACCAGCAATGTTCAACAGTACACTTACAGAAGATGAGATAAATCATTGCCCAGTTGATGGAGCCATAATGATAACAGCAAGTCATCTTCCATACAACCGGAATGGTCTCAAATTTTTTACAAGTGCCGGTGGTTTGAATAAGGCTGATATCAAAGATATCTTGGAGCGCGCTTCTAGAATATATGAGGACTCTTCTCATGGTAGCACACAAGAATTAGAGCAAGCTTCGAAGGGAGAAGTGAGTAATGTCGATTACATGTCAATTTATGCATCCGATCTTGTGAAAGCAGTTCGTAAATCTGCTGGAAACAAAGAAAAACCACTGGAGGGACTGCACATAGTCGTGGATGCAGGGAATGGAGCAGGTGGCTTTTTTGTGGATAAGGTACTCAAGCCGTTAGGCGCTATTACTACTGGGAGCCAATTCCTAGAGCCTGATGGCATGTTTCCCAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CF322466             [                                                                                                                                                                        TCTCACTGAGCCTGTTACTGAAGCAATAGCTTCTGCATTTGCTGCATGGTTATTAAACAAGAAGAAAGCGGATGGATGGAGACGTTTAAGAATTTCTGTTGGACATGATTCTCGAATTTCTGCACATAAATTGCAGGATGCAGTTACTCTTGGAATTACCACTGCAGGGCATGATGTTTTACAATTTGGATTGGCTTCAACACCAGCAATGTTCAACAGTACACTTACAGAAGATGAGATAAATCATTGCCCAGTTGATGGAGCCATAATGATAACAGCAAGTCATCTTCCATACAACCGGAATGGTCTCAAATTTTTTACAAGTGCCGGTGGTTTGAATAAGGCTGATATCAAAGATATCTTGGAGCGCGCTTCTAGAATATATGAGGACTCTTCTCATGGTAGCACACAAGAATTAGAGCAAGCTTCGAAGGGAGAAGTGAGTAATGTCGATTACATGTCAATTTATGCATCCGATCTTGTGAAAGCAGTTCGTAAATCTGCTGGAAACAAAGAAAAACCACTGGAGGGACTGCACATAGTCGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CB618478             [                                                                                                                                                                                                                                                                                                                                                                                                                                                               AAGTCATCTTCCATACAACCGGAATGGTCTCAAATTTTTTACAAGTGCTGGTGGCTTGAATAAGGCTGATATCAAAGATATCTTGGAGCGTGCTTCTAGAATATACGAGGACTCTTCTCATGGTAGCACACAAGAATTAGAGCAAGCTTCGAAGGGAGAAGTGAGTAATGTCGATTACATGTCAATTTATGCATCCGATCTTGTGAAAGCAGTTCGTAAATCTGCTGGAAACAAATAAAAACCACTGGAGGGACTGCACATAGTCGTGGATGCAGGGAATGGAGCAGGTGGCTTTTTTGTGGATAAGGTACTCAAGCCGTTAGGCGCTATTACTACTGGGAGCCAATTCCTAGAGCCTGATGGCATGTTTCCAAATCACATTCCAAACCCTGAGGACAAAACTGCAATGAAAGCCATTACACAAGCTGTGGCTGATAACAAGGCAGACTTGGGCATCATATTTGACACTGATGTTGACAGGTCTGCTGCTGTTGATTCAAGTGGTCGTGAGTTAAACCGTAACAGATTGATTGCTTTGATGTCTGCCATAGTTCTTGAAGAGCACCCAGGCACTACAATTGTGACAGATAGCGTGACTTCTGATGGGCTGACTACATTTATTGAAAATAAACTTGGAGGGAAGCATCATCGTTTCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CF196105             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CTTCCATACAACCGGAATGGTCTCAAATTTTTTACAAGTGCCGGTGGTTTGAATAAGGCTGATATCAAAGATATCTTGGAGCGCGCTTCTAGAATATATGAGGACTCTTCTCATGGTAGCACACAAGAATTAGAGCAAGCTTCGAAGGGAGAAGTGAGTAATGTCGATTACATGTCAATTTATGCATCCGATCTTGTGAAAGCAGTTCGTAAATCTGCTGGAAACAAAGAAAAACCACTGGAGGGACTGCACATAGTCGTGGATGCAGGGAATGGAGCAGGTGGCTTTTTTGTGGATAAGGTACTCAAGCCGTTAGGCGCTATTACTACTGGGAGCCAATTCCTAGAGCCTGATGGCATGTTTCCAAATCACATTCCAAATCCTGAGGACAAAACTGCAATGAAAGCCATTACACAAGCTGTGGCCGATAACAAGGCAGACTTGGGCATCATATTTGATACTGATGTTGACAGGTCTGCTGCTGTTGATTCAAGTGGTCGTGAGTTAAACCGTAACAGANTGATTGCTTTGATGTCTGCCATAGTTCTTGNNNNGCACCCANNCACTACNNNTGTGACANNNNGCGTGACTTCTGATGGGCTGACTACATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CB656954             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CTTGCTGCAGCTAGAATATTGAATCCAAACGTTGGTAGTAAAGTTTTGACTGATTTGGTCGAGGGCCTTGAGGAGGCTTCTGTGACAGTGGAGATAAGATTGAAGATTGATCAGAATCATGCAGATTTGAAAGGGGGGTCCTTCCGTGATTACGGAGAAGCTGTCTTGAAACATTTGGAGAATGCAATCAGTAAAGATGAATATCTGTGCAAAGCACCGAAGAACTATGAAGGCGTAAGAGTTTCAGGATATGGTGGCTGGTTCTTATTGCGGTTATCCCTCCATGACCCAGTTCTTCCCCTTAACATCGAGGCGCCGAGCAAGGATGATGCCATTAAGCTTGGGCTTGCAGTGCTTACTGCCGTAAGTGAATTTCCAGCATTGGACATAACGGCATTGAACAAGTTTTTGCAGCAGTGATGGAAGTATTGCGGCGGCGACGATAATCTGCAGCCATCACATGCCTTTGTTGAGCTGGGATGAGAGAAACGCACCACAGTACTATACATAGACGTACTTGCATTCAGGCTTACACATAATATTACATGGTTTTGACTTTTCGGCTTTACTTGGTCTTTGTTTGGTATGGAAATGTCAAACAAGGAAGACTAATTTTCGTGTTTTAAAGAAAATATACAAAGTAGTTGTCAGGAATCTTATATACCATCGTCAATGTGTTTTCGGATTGCTTATATCGTCATCAGAGTGCTGTGAAGGCAGTCGGTTTTCGGAACGATGTTATCATCAAATGAAAATATTTCATGTTTCTGTTGTCTTGCTCGTATAAATTTTCATGGTTATTGG]




>consensus_14143#0
CGCCTCCCCGCCGCAGTAGCAGAGTCGCCCGCCGCCGCGCATCCGCATGGCAGCTGCTCA
AGGTAGCAGCGTTGTCCCATCCTCTGCGAAAGTTGACTTTTTAAAGCTCCAGAATGGCAG
TGATATTCGTGGTGTTGCTGTTGGTGGGGTCGAAGGCGAGCCCGTAAATCTCACTGAGCC
TGTTACTGAAGCAATAGCTTCTGCATTTGCTGCATGGTTATTAAACAAGAAGAAAGCGGA
TGGATGGAGACGTTTAAGAATTTCTGTTGGACATGATTCTCGAATTTCTGCACATAAATT
GCAGGATGCAGTTACTCTTGGAATTACCACTGCAGGGCATGATGTTTTACAATTTGGATT
GGCTTCAACACCAGCAATGTTCAACAGTACACTTACAGAAGATGAGATAAATCATTGCCC
AGTTGATGGAGCCATAATGATAACAGCAAGTCATCTTCCATACAACCGGAATGGTCTCAA
ATTTTTTACAAGTGCCGGTGGTTTGAATAAGGCTGATATCAAAGATATCTTGGAGCGCGC
TTCTAGAATATATGAGGACTCTTCTCATGGTAGCACACAAGAATTAGAGCAAGCTTCGAA
GGGAGAAGTGAGTAATGTCGATTACATGTCAATTTATGCATCCGATCTTGTGAAAGCAGT
TCGTAAATCTGCTGGAAACAAAGAAAAACCACTGGAGGGACTGCACATAGTCGTGGATGC
AGGGAATGGAGCAGGTGGCTTTTTTGTGGATAAGGTACTCAAGCCGTTAGGCGCTATTAC
TACTGGGAGCCAATTCCTAGAGCCTGATGGCATGTTTCCAAATCACATTCCAAATCCTGA
GGACAAAACTGCAATGAAAGCCATTACACAAGCTGTGGCCGATAACAAGGCAGACTTGGG
CATCATATTTGATACTGATGTTGACAGGTCTGCTGCTGTTGATTCAAGTGGTCGTGAGTT
AAACCGTAACAGATTGATTGCTTTGATGTCTGCCATAGTTCTTGAAGAGCACCCAGGCAC
TACAATTGTGACAGATAGCGTGACTTCTGATGGGCTGACTACATTTATTGAAAATAAACT
TGGAGGGAAGCATCATCGTTTCAAGCGAGGGTACAAGAATGTAATAGATGAGGCTATTCG
TCTGAATACTATTGGTGAGGAGTCACATTTAGCTATGGAAACAAGTGGCCATGGAGCACT
GAAAGAGAATCACTGGCTCGATGATGGTGCATATCTTATGGTTAAACTTTTGAATAAGCT
TGCTGCAGCTAGAATATTGAATCCAAACGTTGGTAGTAAAGTTTTGACTGATTTGGTCGA
GGGCCTTGAGGAGGCTTCTGTGACAGTGGAGATAAGATTGAAGATTGATCAGAATCATGC
AGATTTGAAAGGGGGGTCCTTCCGTGATTACGGAGAAGCTGTCTTGAAACATTTGGAGAA
TGCAATCAGTAAAGATGAATATCTGTGCAAAGCACCGAAGAACTATGAAGGCGTAAGAGT
TTCAGGATATGGTGGCTGGTTCTTATTGCGGTTATCCCTCCATGACCCAGTTCTTCCCCT
TAACATCGAGGCGCCGAGCAAGGATGATGCCATTAAGCTTGGGCTTGCAGTGCTTACTGC
CGTAAGTGAATTTCCAGCATTGGACATAACGGCATTGAACAAGTTTTTGCAGCAGTGATG
GAAGTATTGCGGCGGCGACGATAATCTGCAGCCATCACATGCCTTTGTTGAGCTGGGATG
AGAGAAACGCACCACAGTACTATACATAGACGTACTTGCATTCAGGCTTACACATAATAT
TACATGGTTTTGACTTTTCGGCTTTACTTGGTCTTTGTTTGGTATGGAAATGTCAAACAA
GGAAGACTAATTTTCGTGTTTTAAAGAAAATATACAAAGTAGTTGTCAGGAATCTTATAT
ACCATCGTCAATGTGTTTTCGGATTGCTTATATCGTCATCAGAGTGCTGTGAAGGCAGTC
GGTTTTCGGAACGATGTTATCATCAAATGAAAATATTTCATGTTTCTGTTGTCTTGCTCG
TATAAATTTTCATGGTTATTGG

consensusID : consensus_14143#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 830
fasta sequence

                              [TCACTGGCTCGATGATGGTGCATATCTTATGGTTAAACTTTTGAATAAGCTTGCTGCAGCTAGAATATTGAATCCAAACGTTGGTAGTAAAGTTTTGACTGATTTGGTCGAGGGCCTTGAGGAGGCTTCTGTGACAGTGGAGATAAGATTGAAGATTGATCAGAATCATGCAGATTTGAAAGGCGGGTCCTTCCGTGATTACGGAGAAGCTGTCTTGAAACATTTGGAGAATTCAATCAGTAAAGATGAACATCTGTGCAAAGCACCAAAGAACTATGAAGGCGTAAGAGTTTCAGGATATGGTGGCTGGTTCTTATTGCGGTTATCCCTCCATGACCCAGTTCTTCCCCTTAACATCGAGGCGCCGAGCAAGGATGATGCCATTAAGCTTGGGCTTGCAGTGCTTACTGCCGTAAGTGAATTTCCAGCA-TTGGACATAACGGCATTGAACAAGTTTTTGCA-GCAGTGATGGAAGTATTGCGGCGGCGACGATAATCTGCAGC-CATCACATGC-CTTTGTTGAGCTGGGATGAGAGAAACGCACCACAGTACTATACAGAGACGTACTTGCATTCAGGCTTACA-TGGTTTTGACTTTTCGGCTTTACTTGGTCTTTGTTTGGTATGGAAATGTCAAGCA-AGGAAGACTAATTTTCGTGTTTTAAAGAAAATATG-C-AAGTAGTT-GTCAAGAATCGTATACCATCATC-ATGTGTTTTCGGATTGCTTATATCGTCATCA-GAGTGCTTAAAGACCTGATTTTGCGGAGGTTTTTGGGAC-ATGTTGTCGTCAAATGAAAGTATTTCCTGTTTCTGTTGTCTTAAAAAAAAAAAGA]

[-] EMBL CB618479             [TCACTGGCTCGATGATGGTGCATATCTTATGGTTAAACTTTTGAATAAGCTTGCTGCAGCTAGAATATTGAATCCAAACGTTGGTAGTAAAGTTTTGACTGATTTGGTCGAGGGCCTTGAGGAGGCTTCTGTGACAGTGGAGATAAGATTGAAGATTGATCAGAATCATGCAGATTTGAAAGGCGGGTCCTTCCGTGATTACGGAGAAGCTGTCTTGAAACATTTGGAGAATTCAATCAGTAAAGATGAACATCTGTGCAAAGCACCAAAGAACTATGAAGGCGTAAGAGTTTCAGGATATGGTGGCTGGTTCTTATTGCGGTTATCCCTCCATGACCCAGTTCTTCCCCTTAACATCGAGGCGCCGAGCAAGGATGATGCCATTAAGCTTGGGCTTGCAGTGCTTACTGCCGTAAGTGAATTTCCAGCA TTGGACATAACGGCATTGAACAAGTTTTTGCA GCAGTGATGGAAGTATTGCGGCGGCGACGATAATCTGCAGC CATCACATGC CTTTGTTGAGCTGGGATGAGAGAAACGCACCACAGTACTATACAGAGACGTACTTGCATTCAGGCTTACA TGGTTTTGACTTTTCGGCTTTACTTGGTCTTTGTTTGGTATGGAAATGTCAAGCA AGGAAGACTAATTTTCGTGTTTTAAAGAAAATATG CAAAGTAGTT GTCAAGAATCGTATACCATCATCAATGTGTTTTCGGATTGCTTATATCGTCATCA GAGTGCTTAAAGACCTGATTTTGCGGAGGTTTTTGGGACAATGTTGTCGTCAAATGAAAGTATTTCCTGTTTCTG      TAAAAAAAAAAAGA]
[+] EMBL BI802398             [                                                                                                                                                                                                                                                                                                                                                 CCAGTTCTTCCCCTTAACATCGAGGCGCCGAGCAAGGATGATGCCATTAAGCTTGGGCTTGCAGTGCTTACTGCCGTAAGTGAATTTCCAGCA TTGGACATAACGGCATTGAACAAGTTTTTGCA GCAGTGATGGAAGTATTGCGGCGGCGACGATAATCTGCAGC CATCACATGC CTTTGTTGAGCTGGGATGAGAGAAACGCACCACAGTACTATACAGAGACGTACTTGCATTCAGGCTTACA TGGTTTTGACTTTTCGGCTTTACTTGGTCTTTGTTTGGTATGGAAATGTCAAGC  AGGAAGACTAATTTTCGTGTTTTAAAGAAAATATG C AAGTAGTTCGTCAAGAATCGTATACCATCATC ATGTGTTTTCGGATTGCTTATATCGTCATCACGAGTGCTTAAAGACCTGATTTTGCGGAGGTTTTTGGGAC Aaaaa                                                  ]
[+] EMBL BI811939             [                                                                                                                                                                                                                                                                                                                                                                         GCGCCGAGCAAGGATGAT CCATTAAGCTTGGGCTT CAGTGCTTACT CCGTAAGTGAATTTCCAGCACTTGGACATAACGGCATTGAACAAGTTTTTGCACGCAGTGATGGAAGTATTGCGGCGGCGACGATAATCTCAAGCACATCACATGCACTTTGTTGAGCTGGGATGAGAGAAACGCACCACAGTACTATACAGAGACGTACTTGCATTCAGGCTTACACTGGTTTTGACTTTTCGGCTTTACTTGGTCTTTGTTTGGTATGGAAATGTCAAGCACAGGAAGACTAATTTTCGTGTTTTAAAGAAAATATGCC AAGTAGTT GTCAAGAATCGTATACCATCATC ATGTGTTTTCGGATTGCTTATATCGTCATCA GAGTGCTTAAAGACCTGATTTTGCGGAGGTTTTTGGGAC ATGTTGTCGTCAAATGAAAGTATTTCCTGTTTCTGTTGTCTTAAAAAAAAAA   ]
[+] EMBL BI802546             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TCTGCAGC CATCACATGC CTTTGTTGAGCTGGGATGAGAGAAACGCACCACAGTACTATACAGAGACGTACTTGCATTCAGGCTTACA TGGTTTTGACTTTTCGGCTTTACTTGGTCTTTGTTTGGTATGGAAATGTCAAGCA AGGAAGACTAATTTTCGTGTTTTAAAGAAAATATG C AAGTAGTT GTCAAGAATCGTATACCATCATC ATGTGTTTTCGGATTGCTTATATCGTCATCA GAGTGCTTAAAGACCTGATTTTGCGGAGGTTTTTGGGAC ATGTTGTCGTCAAATGAAAGTATTTCCTGTTTCTGTTGTCTTAAAAAAAAA    ]




>consensus_14143#1
TCACTGGCTCGATGATGGTGCATATCTTATGGTTAAACTTTTGAATAAGCTTGCTGCAGC
TAGAATATTGAATCCAAACGTTGGTAGTAAAGTTTTGACTGATTTGGTCGAGGGCCTTGA
GGAGGCTTCTGTGACAGTGGAGATAAGATTGAAGATTGATCAGAATCATGCAGATTTGAA
AGGCGGGTCCTTCCGTGATTACGGAGAAGCTGTCTTGAAACATTTGGAGAATTCAATCAG
TAAAGATGAACATCTGTGCAAAGCACCAAAGAACTATGAAGGCGTAAGAGTTTCAGGATA
TGGTGGCTGGTTCTTATTGCGGTTATCCCTCCATGACCCAGTTCTTCCCCTTAACATCGA
GGCGCCGAGCAAGGATGATGCCATTAAGCTTGGGCTTGCAGTGCTTACTGCCGTAAGTGA
ATTTCCAGCATTGGACATAACGGCATTGAACAAGTTTTTGCAGCAGTGATGGAAGTATTG
CGGCGGCGACGATAATCTGCAGCCATCACATGCCTTTGTTGAGCTGGGATGAGAGAAACG
CACCACAGTACTATACAGAGACGTACTTGCATTCAGGCTTACATGGTTTTGACTTTTCGG
CTTTACTTGGTCTTTGTTTGGTATGGAAATGTCAAGCAAGGAAGACTAATTTTCGTGTTT
TAAAGAAAATATGCAAGTAGTTGTCAAGAATCGTATACCATCATCATGTGTTTTCGGATT
GCTTATATCGTCATCAGAGTGCTTAAAGACCTGATTTTGCGGAGGTTTTTGGGACATGTT
GTCGTCAAATGAAAGTATTTCCTGTTTCTGTTGTCTTAAAAAAAAAAAGA

consensusID : consensus_14143#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 694
fasta sequence

                              [TCTGTGACAGTGGAGATAAGATTGAAGATTGATCAGAATCATGCAGATNTGAAAGGCGGGTCCTTCCGTGATTACGGAGAAGCTGTCTTGAAACATTTGGAGAATTCAATCAGTAAAGATGAACATCTGTGCAAAGCACCAAAGAACTATGAAGGCGTAAGAGTTTCAGGATATGGTGGCTGGTTCTTATTGCGGTTATCCCTCCATGACCCAGTTCTTCCCCTTAACATCGAGGCGCCGAGCAAGGATGATGCCATTAAGCTTGGGCTTGCAGTGCTTACTGCCGTAAGTGAATTTCCAGCATTGGACATAACGGCATTGAACAAGTTTTTGCAGCAGTGATGGAAGTATTGCGGCGGCGACGATAATCTGCAGCCATCACATGCCTTTGTTGAGCTGGGATGAGAGAAACGCCCCACAGTACTATACAGAGACGTACTTGCATTCAGGCTTACATGGTTTTGACTTTTCGGCTTTACTTGGTCTTTGTTTGGTATGGAAATGTCAAGCAAGGAAGACTAATTTTCGTGTTTTAAAGAAAATATGCAAAGTAGTTGTCAAGAATCGTATACCATCATCAATGTGTTTTCGGATTGCTTATATCGTCATCAGAGTGCTTAAAGACCTGATTTTGCGGAGGTTTTTGGGACAATGTTGTCGTCAAATGAAAGTATTTCCTGTTAAAAAAAAAAAA]

[-] EMBL CA762666             [TCTGTGACAGTGGAGATAAGATTGAAGATTGATCAGAATCATGCAGATNTGAAAGGCGGGTCCTTCCGTGATTACGGAGAAGCTGTCTTGAAACATTTGGAGAATTCAATCAGTAAAGATGAACATCTGTGCAAAGCACCAAAGAACTATGAAGGCGTAAGAGTTTCAGGATATGGTGGCTGGTTCTTATTGCGGTTATCCCTCCATGACCCAGTTCTTCCCCTTAACATCGAGGCGCCGAGCAAGGATGATGCCATTAAGCTTGGGCTTGCAGTGCTTACTGCCGTAAGTGAATTTCCAGCATTGGACATAACGGCATTGAACAAGTTTTTGCAGCAGTGATGGAAGTATTGCGGCGGCGACGATAATCTGCAGCCATCACATGCCTTTGTTGAGCTGGGATGAGAGAAACGCCCCACAGTACTATACAGAGACGTACTTGCATTCAGGCTTACATGGTTTTGACTTTTCGGCTTTACTTGGTCTTTGTTTGGTATGGAAATGTCAAGCAAGGAAGACTAATTTTCGTGTTTTAAAGAAAATATGCAAAGTAGTTGTCAAGAATCGTATACCATCATCAATGTGTTTTCGGATTGCTTATATCGTCATCAGAGTGCTTAAAGACCTGATTTTGCGGAGGTTTTTGGGACAATGTTGTCGTCAAATGAAAGTATTTCCTGTTAAAAAAAAAAAA]




>consensus_14143#2
TCTGTGACAGTGGAGATAAGATTGAAGATTGATCAGAATCATGCAGATNTGAAAGGCGGG
TCCTTCCGTGATTACGGAGAAGCTGTCTTGAAACATTTGGAGAATTCAATCAGTAAAGAT
GAACATCTGTGCAAAGCACCAAAGAACTATGAAGGCGTAAGAGTTTCAGGATATGGTGGC
TGGTTCTTATTGCGGTTATCCCTCCATGACCCAGTTCTTCCCCTTAACATCGAGGCGCCG
AGCAAGGATGATGCCATTAAGCTTGGGCTTGCAGTGCTTACTGCCGTAAGTGAATTTCCA
GCATTGGACATAACGGCATTGAACAAGTTTTTGCAGCAGTGATGGAAGTATTGCGGCGGC
GACGATAATCTGCAGCCATCACATGCCTTTGTTGAGCTGGGATGAGAGAAACGCCCCACA
GTACTATACAGAGACGTACTTGCATTCAGGCTTACATGGTTTTGACTTTTCGGCTTTACT
TGGTCTTTGTTTGGTATGGAAATGTCAAGCAAGGAAGACTAATTTTCGTGTTTTAAAGAA
AATATGCAAAGTAGTTGTCAAGAATCGTATACCATCATCAATGTGTTTTCGGATTGCTTA
TATCGTCATCAGAGTGCTTAAAGACCTGATTTTGCGGAGGTTTTTGGGACAATGTTGTCG
TCAAATGAAAGTATTTCCTGTTAAAAAAAAAAAA

consensusID : consensus_14143#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 636
fasta sequence

                              [AGACAAGGGGGATTACGGAGAAGCTGTCTTGAAACATTTGGAGAATTCAATCAGTAAAGATGAACATCTGTGCAAAGCACCAAAGAACTATGAAGGCGTAAGAGTTTCCGGATATGGTGGCTGGTTCTTATTGCGGTTATCCCTCCATGACCCAGTTCTTCCCCTTAACATCGAGGCGCCGAGCAAGGATGATGCCATTAAGCTTGGGCTTGCAGTGCTTACTGCCGTAAGTGAATTTCCAGCATTGGACATAACGGCATTGAACAAGTTTTTGCAGCAGTGATGGAAGTATTGCGGCGGCGACGATAATCTGCAGCCATCACATGCCTTTGTTGAGCTGGGATGAGAGAAACGCCCCACAGTACTATACAGAGACGTACTTGCATTCAGGCTTACATGGTTTTGACTTTTCGGCTTTACTTGGTCTTTGTTTGGTATGGAAATGTCAAGCAAGGAAGACTAATTTTCGTGTTTTAAAGAAAATATGCAAAGTAGTTGTCAAGAATCGTATACCATCATCAATGTGTTTTCGGATTGCTTAAATCGTCATCAGAGTGCTTAAAGACCTGATTTTGCGGAGGTTTTTGGGACAATGTTGTCGTCAAATGAAAGTATTTCCTGTTAAAAAAAAAAAAA]

[-] EMBL CA762665             [AGACAAGGGGGATTACGGAGAAGCTGTCTTGAAACATTTGGAGAATTCAATCAGTAAAGATGAACATCTGTGCAAAGCACCAAAGAACTATGAAGGCGTAAGAGTTTCCGGATATGGTGGCTGGTTCTTATTGCGGTTATCCCTCCATGACCCAGTTCTTCCCCTTAACATCGAGGCGCCGAGCAAGGATGATGCCATTAAGCTTGGGCTTGCAGTGCTTACTGCCGTAAGTGAATTTCCAGCATTGGACATAACGGCATTGAACAAGTTTTTGCAGCAGTGATGGAAGTATTGCGGCGGCGACGATAATCTGCAGCCATCACATGCCTTTGTTGAGCTGGGATGAGAGAAACGCCCCACAGTACTATACAGAGACGTACTTGCATTCAGGCTTACATGGTTTTGACTTTTCGGCTTTACTTGGTCTTTGTTTGGTATGGAAATGTCAAGCAAGGAAGACTAATTTTCGTGTTTTAAAGAAAATATGCAAAGTAGTTGTCAAGAATCGTATACCATCATCAATGTGTTTTCGGATTGCTTAAATCGTCATCAGAGTGCTTAAAGACCTGATTTTGCGGAGGTTTTTGGGACAATGTTGTCGTCAAATGAAAGTATTTCCTGTTAAAAAAAAAAAAA]




>consensus_14143#3
AGACAAGGGGGATTACGGAGAAGCTGTCTTGAAACATTTGGAGAATTCAATCAGTAAAGA
TGAACATCTGTGCAAAGCACCAAAGAACTATGAAGGCGTAAGAGTTTCCGGATATGGTGG
CTGGTTCTTATTGCGGTTATCCCTCCATGACCCAGTTCTTCCCCTTAACATCGAGGCGCC
GAGCAAGGATGATGCCATTAAGCTTGGGCTTGCAGTGCTTACTGCCGTAAGTGAATTTCC
AGCATTGGACATAACGGCATTGAACAAGTTTTTGCAGCAGTGATGGAAGTATTGCGGCGG
CGACGATAATCTGCAGCCATCACATGCCTTTGTTGAGCTGGGATGAGAGAAACGCCCCAC
AGTACTATACAGAGACGTACTTGCATTCAGGCTTACATGGTTTTGACTTTTCGGCTTTAC
TTGGTCTTTGTTTGGTATGGAAATGTCAAGCAAGGAAGACTAATTTTCGTGTTTTAAAGA
AAATATGCAAAGTAGTTGTCAAGAATCGTATACCATCATCAATGTGTTTTCGGATTGCTT
AAATCGTCATCAGAGTGCTTAAAGACCTGATTTTGCGGAGGTTTTTGGGACAATGTTGTC
GTCAAATGAAAGTATTTCCTGTTAAAAAAAAAAAAA

consensusID : consensus_14143#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 609
fasta sequence

                              [CGCCTCCCCGCCGCAGTAGCAGAGTCGCCCGCCGCCGCGCATCCGCATGGCAGCATTATCA-GGGAAGATCATTCAAAATGCATTCTTGGCACAACATCGCCCACAGGCTAGACACAGCACAAGATATCCCAGTGACTTTTGTGCCCTCGATACCCGCAGCGTGCATTCTTTCCAGGAATGTAGACTAAGACTGGCTGGTACTTCAGCCAAGTGGTTAAATACAATATCAACAGCATGGATTAGCTCCAGCAAACAAGCATATATTAGCTGCAATGCTGCTCAAGGTAGCAGCGTTGTCCCATCCTCTGCGAAAGTTGACTTTTTAAAGCTCCAGAATGGCAGTGATATTCGTGGTGTTGCTGTTGGTGGGGTCGAAGGCGAGCCCGTAAATCTCACTGAGCCTGTTACTGAAGCAATAGCTTCTGCATTTGCTGCATGGTTATTAAACAAGAAGAAAGCGGATGGATGGAGACGTTTAAGAATTTCTGTTGGACATGATTCTCGAATTTCTGCACATAAATTGCAGGATGCAGTTACTCTTGGAATTACCACTGCAGGGCATGATGTTTTACAATTTGGATTGGCTTCANCNNNNNNNNTGTTCNNNNN]

[+] EMBL CF306752             [CGCCTCCCCGCCGCAGTAGCAGAGTCGCCCGCCGCCGCGCATCCGCATGGCAGCATTATCA GGGAAGATCATTCAAAATGCATTCTTGGCACAACATCGCCCACAGGCTAGACACAGCACAAGATATCCCAGTGACTTTTGTGCCCTCGATACCCGCAGCGTGCATTCTTTCCAGGAATGTAGACTAAGACTGGCTGGTACTTCAGCCAAGTGGTTAAATACAATATCAACAGCATGGATTAGCTCCAGCAAACAAGCATATATTAGCTGCAATGCTGCTCAAGGTAGCAGCGTTGTCCCATCCTCTGCGAAAGTTGACTTTTTAAAGCTCCAGAATGGCAGTGATATTCGTGGTGTTGCTGTTGGTGGGGTCGAAGGCGAGCCCGTAAATCTCACTGAGCCTGTTACTGAAGCAATAGCTTCTGCATTTGCTGCATGGTTATTAAACAAGAAG                                                                                                                                                           ]
[+] EMBL CF326182             [                                                       TTATCAGGGGAAGATCATTCAAAATGCATTCTTGGCACAACATCGCCCACAGGCTAGACACAG ACAAGATATCCCAGTGACTTTTGTGCCCTCGATACCCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CF196710             [                                                                                                                                                                                                                                                              CAAGCATATATTAGCTGCAATGCTGCTCAAGGTAGCAGCGTTGTCCCATCCTCTGCGAAAGTTGACTTTTTAAAGCTCCAGAATGGCAGTGATATTCGTGGTGTTGCTGTTGGTGGGGTCGAAGGCGAGCCCGTAAATCTCACTGAGCCTGTTACTGAAGCAATAGCTTCTGCATTTGCTGCATGGTTATTAAACAAGAAGAAAGCGGATGGATGGAGACGTTTAAGAATTTCTGTTGGACATGATTCTCGAATTTCTGCACATAAATTGCAGGATGCAGTTACTCTTGGAATTACCACTGCAGGGCATGATGTTTTACAATTTGGATTGGCTTCANCNNNNNNNNTGTTCNNNNN]




>consensus_14143#4
CGCCTCCCCGCCGCAGTAGCAGAGTCGCCCGCCGCCGCGCATCCGCATGGCAGCATTATC
AGGGAAGATCATTCAAAATGCATTCTTGGCACAACATCGCCCACAGGCTAGACACAGCAC
AAGATATCCCAGTGACTTTTGTGCCCTCGATACCCGCAGCGTGCATTCTTTCCAGGAATG
TAGACTAAGACTGGCTGGTACTTCAGCCAAGTGGTTAAATACAATATCAACAGCATGGAT
TAGCTCCAGCAAACAAGCATATATTAGCTGCAATGCTGCTCAAGGTAGCAGCGTTGTCCC
ATCCTCTGCGAAAGTTGACTTTTTAAAGCTCCAGAATGGCAGTGATATTCGTGGTGTTGC
TGTTGGTGGGGTCGAAGGCGAGCCCGTAAATCTCACTGAGCCTGTTACTGAAGCAATAGC
TTCTGCATTTGCTGCATGGTTATTAAACAAGAAGAAAGCGGATGGATGGAGACGTTTAAG
AATTTCTGTTGGACATGATTCTCGAATTTCTGCACATAAATTGCAGGATGCAGTTACTCT
TGGAATTACCACTGCAGGGCATGATGTTTTACAATTTGGATTGGCTTCANCNNNNNNNNT
GTTCNNNNN

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14143#2      ------------------------------------------------------------
consensus_14143#3      ------------------------------------------------------------
consensus_14143#1      ------------------------------------------------------------
consensus_14143#0      CGCCTCCCCGCCGCAGTAGCAGAGTCGCCCGCCGCCGCGCATCCGCATGGCAGCTGCTCA 60
consensus_14143#4      ------------------------------------------------------------
                                                                                   

consensus_14143#2      ------------------------------------------------------------
consensus_14143#3      ------------------------------------------------------------
consensus_14143#1      ------------------------------------------------------------
consensus_14143#0      AGGTAGCAGCGTTGTCCCATCCTCTGCGAAAGTTGACTTTTTAAAGCTCCAGAATGGCAG 120
consensus_14143#4      ------------------------------------------------------------
                                                                                   

consensus_14143#2      ------------------------------------------------------------
consensus_14143#3      ------------------------------------------------------------
consensus_14143#1      ------------------------------------------------------------
consensus_14143#0      TGATATTCGTGGTGTTGCTGTTGGTGGGGTCGAAGGCGAGCCCGTAAATCTCACTGAGCC 180
consensus_14143#4      ------------------------------------------------------------
                                                                                   

consensus_14143#2      ------------------------------------------------------------
consensus_14143#3      ------------------------------------------------------------
consensus_14143#1      ------------------------------------------------------------
consensus_14143#0      TGTTACTGAAGCAATAGCTTCTGCATTTGCTGCATGGTTATTAAACAAGAAGAAAGCGGA 240
consensus_14143#4      ------------------------------------------------------------
                                                                                   

consensus_14143#2      ------------------------------------------------------------
consensus_14143#3      ------------------------------------------------------------
consensus_14143#1      ------------------------------------------------------------
consensus_14143#0      TGGATGGAGACGTTTAAGAATTTCTGTTGGACATGATTCTCGAATTTCTGCACATAAATT 300
consensus_14143#4      ------------------------------------------------------------
                                                                                   

consensus_14143#2      ------------------------------------------------------------
consensus_14143#3      ------------------------------------------------------------
consensus_14143#1      ------------------------------------------------------------
consensus_14143#0      GCAGGATGCAGTTACTCTTGGAATTACCACTGCAGGGCATGATGTTTTACAATTTGGATT 360
consensus_14143#4      ------------------------------------------------------------
                                                                                   

consensus_14143#2      ------------------------------------------------------------
consensus_14143#3      ------------------------------------------------------------
consensus_14143#1      ------------------------------------------------------------
consensus_14143#0      GGCTTCAACACCAGCAATGTTCAACAGTACACTTACAGAAGATGAGATAAATCATTGCCC 420
consensus_14143#4      ------------------------------------------------------------
                                                                                   

consensus_14143#2      ------------------------------------------------------------
consensus_14143#3      ------------------------------------------------------------
consensus_14143#1      ------------------------------------------------------------
consensus_14143#0      AGTTGATGGAGCCATAATGATAACAGCAAGTCATCTTCCATACAACCGGAATGGTCTCAA 480
consensus_14143#4      ------------------------------------------------------------
                                                                                   

consensus_14143#2      ------------------------------------------------------------
consensus_14143#3      ------------------------------------------------------------
consensus_14143#1      ------------------------------------------------------------
consensus_14143#0      ATTTTTTACAAGTGCCGGTGGTTTGAATAAGGCTGATATCAAAGATATCTTGGAGCGCGC 540
consensus_14143#4      ------------------------------------------------------------
                                                                                   

consensus_14143#2      ------------------------------------------------------------
consensus_14143#3      ------------------------------------------------------------
consensus_14143#1      ------------------------------------------------------------
consensus_14143#0      TTCTAGAATATATGAGGACTCTTCTCATGGTAGCACACAAGAATTAGAGCAAGCTTCGAA 600
consensus_14143#4      ------------------------------------------------------------
                                                                                   

consensus_14143#2      ------------------------------------------------------------
consensus_14143#3      ------------------------------------------------------------
consensus_14143#1      ------------------------------------------------------------
consensus_14143#0      GGGAGAAGTGAGTAATGTCGATTACATGTCAATTTATGCATCCGATCTTGTGAAAGCAGT 660
consensus_14143#4      ------------------------------------------------------------
                                                                                   

consensus_14143#2      ------------------------------------------------------------
consensus_14143#3      ------------------------------------------------------------
consensus_14143#1      ------------------------------------------------------------
consensus_14143#0      TCGTAAATCTGCTGGAAACAAAGAAAAACCACTGGAGGGACTGCACATAGTCGTGGATGC 720
consensus_14143#4      ------------------------------------------------------------
                                                                                   

consensus_14143#2      ------------------------------------------------------------
consensus_14143#3      ------------------------------------------------------------
consensus_14143#1      ------------------------------------------------------------
consensus_14143#0      AGGGAATGGAGCAGGTGGCTTTTTTGTGGATAAGGTACTCAAGCCGTTAGGCGCTATTAC 780
consensus_14143#4      ------------------------------------------------------------
                                                                                   

consensus_14143#2      ------------------------------------------------------------
consensus_14143#3      ------------------------------------------------------------
consensus_14143#1      ------------------------------------------------------------
consensus_14143#0      TACTGGGAGCCAATTCCTAGAGCCTGATGGCATGTTTCCAAATCACATTCCAAATCCTGA 840
consensus_14143#4      ------------------------------------------------------------
                                                                                   

consensus_14143#2      ------------------------------------------------------------
consensus_14143#3      ------------------------------------------------------------
consensus_14143#1      ------------------------------------------------------------
consensus_14143#0      GGACAAAACTGCAATGAAAGCCATTACACAAGCTGTGGCCGATAACAAGGCAGACTTGGG 900
consensus_14143#4      ------------------------------------------------------------
                                                                                   

consensus_14143#2      ------------------------------------------------------------
consensus_14143#3      ------------------------------------------------------------
consensus_14143#1      ------------------------------------------------------------
consensus_14143#0      CATCATATTTGATACTGATGTTGACAGGTCTGCTGCTGTTGATTCAAGTGGTCGTGAGTT 960
consensus_14143#4      ------------------------------------------------------------
                                                                                   

consensus_14143#2      ------------------------------------------------------------
consensus_14143#3      ------------------------------------------------------------
consensus_14143#1      ------------------------------------------------------------
consensus_14143#0      AAACCGTAACAGATTGATTGCTTTGATGTCTGCCATAGTTCTTGAAGAGCACCCAGGCAC 1020
consensus_14143#4      ------------------------------------------------------------
                                                                                   

consensus_14143#2      ------------------------------------------------------------
consensus_14143#3      ------------------------------------------------------------
consensus_14143#1      ------------------------------------------------------------
consensus_14143#0      TACAATTGTGACAGATAGCGTGACTTCTGATGGGCTGACTACATTTATTGAAAATAAACT 1080
consensus_14143#4      ------------------------------------------------------------
                                                                                   

consensus_14143#2      ------------------------------------------------------------
consensus_14143#3      ------------------------------------------------------------
consensus_14143#1      ------------------------------------------------------------
consensus_14143#0      TGGAGGGAAGCATCATCGTTTCAAGCGAGGGTACAAGAATGTAATAGATGAGGCTATTCG 1140
consensus_14143#4      ------------------------------------------------------------
                                                                                   

consensus_14143#2      ------------------------------------------------------------
consensus_14143#3      ------------------------------------------------------------
consensus_14143#1      ------------------------------------------------------------
consensus_14143#0      TCTGAATACTATTGGTGAGGAGTCACATTTAGCTATGGAAACAAGTGGCCATGGAGCACT 1200
consensus_14143#4      ------------------------------------------------------------
                                                                                   

consensus_14143#2      ------------------------------------------------------------
consensus_14143#3      ------------------------------------------------------------
consensus_14143#1      ---------TCACTGGCTCGATGATGGTGCATATCTTATGGTTAAACTTTTGAATAAGCT 51
consensus_14143#0      GAAAGAGAATCACTGGCTCGATGATGGTGCATATCTTATGGTTAAACTTTTGAATAAGCT 1260
consensus_14143#4      ------------------------------------------------------------
                                                                                   

consensus_14143#2      ------------------------------------------------------------
consensus_14143#3      ------------------------------------------------------------
consensus_14143#1      TGCTGCAGCTAGAATATTGAATCCAAACGTTGGTAGTAAAGTTTTGACTGATTTGGTCGA 111
consensus_14143#0      TGCTGCAGCTAGAATATTGAATCCAAACGTTGGTAGTAAAGTTTTGACTGATTTGGTCGA 1320
consensus_14143#4      ------------------------------------------------------------
                                                                                   

consensus_14143#2      ----------------TCTGTGACAGTGGAGATAAGATTGAAGATTGATCAGAATCATGC 44
consensus_14143#3      ------------------------------------------------------------
consensus_14143#1      GGGCCTTGAGGAGGCTTCTGTGACAGTGGAGATAAGATTGAAGATTGATCAGAATCATGC 171
consensus_14143#0      GGGCCTTGAGGAGGCTTCTGTGACAGTGGAGATAAGATTGAAGATTGATCAGAATCATGC 1380
consensus_14143#4      ------------------------------------------------------------
                                                                                   

consensus_14143#2      AGATNTGAAAGGCGGGTCCTT-CCGTGATTACGGAGAAGCT-GTCTTGAAACATTTGGAG 102
consensus_14143#3      ---------AGACAAGG-------GGGATTACGGAGAAGCT-GTCTTGAAACATTTGGAG 43
consensus_14143#1      AGATTTGAAAGGCGGGTCCTT-CCGTGATTACGGAGAAGCT-GTCTTGAAACATTTGGAG 229
consensus_14143#0      AGATTTGAAAGGGGGGTCCTT-CCGTGATTACGGAGAAGCT-GTCTTGAAACATTTGGAG 1438
consensus_14143#4      ------------CGCCTCCCCGCCGCAGTAGCAGAGTCGCCCGCCGCCGCGCATCCGCAT 48
                                               *   *  * ***  **  * *      ***  * * 

consensus_14143#2      AATTCAATCAGTAAAGATGAACATCTGTGCAAAGCACCAAAGAACTATGAAGGCGTAAGA 162
consensus_14143#3      AATTCAATCAGTAAAGATGAACATCTGTGCAAAGCACCAAAGAACTATGAAGGCGTAAGA 103
consensus_14143#1      AATTCAATCAGTAAAGATGAACATCTGTGCAAAGCACCAAAGAACTATGAAGGCGTAAGA 289
consensus_14143#0      AATGCAATCAGTAAAGATGAATATCTGTGCAAAGCACCGAAGAACTATGAAGGCGTAAGA 1498
consensus_14143#4      GGCAGCATTATCAGGGAAGATCATTCAA--AATGCATTCTTGGCACAACATCGCCCACAG 106
                             ** *  *  ** **  **      ** ***     *    *  *  **  *   

consensus_14143#2      GTTTCAGGATATGGTGGCTGGT-TCTTATTG-CGGTTATCCCTCCATGACCCAGTTCTTC 220
consensus_14143#3      GTTTCCGGATATGGTGGCTGGT-TCTTATTG-CGGTTATCCCTCCATGACCCAGTTCTTC 161
consensus_14143#1      GTTTCAGGATATGGTGGCTGGT-TCTTATTG-CGGTTATCCCTCCATGACCCAGTTCTTC 347
consensus_14143#0      GTTTCAGGATATGGTGGCTGGT-TCTTATTG-CGGTTATCCCTCCATGACCCAGTTCTTC 1556
consensus_14143#4      GCT---AGACACAGCACAAGATATCCCAGTGACTTTTGTGCCCTCGATACCCGCAGCGTG 163
                       * *    ** *  *     * * **  * ** *  ** * **  *   ****    * * 

consensus_14143#2      CCCTTAACATCGAGGCGCCGAGCAAGGATGATGCCATTAAGCTTGGGCTTGCAGTGCTTA 280
consensus_14143#3      CCCTTAACATCGAGGCGCCGAGCAAGGATGATGCCATTAAGCTTGGGCTTGCAGTGCTTA 221
consensus_14143#1      CCCTTAACATCGAGGCGCCGAGCAAGGATGATGCCATTAAGCTTGGGCTTGCAGTGCTTA 407
consensus_14143#0      CCCTTAACATCGAGGCGCCGAGCAAGGATGATGCCATTAAGCTTGGGCTTGCAGTGCTTA 1616
consensus_14143#4      CATTCTTTCCAGGAATGTAGACTAAGACTG--GCTGGTA--CTTCAGCCA--AGTGGTTA 217
                       *  *       *    *  **  ***  **  **   **  ***  **    **** ***

consensus_14143#2      CTGCCGTAAGTGAATTTCCAGCATTGGACATAACGGCATTGAACAAGTTTTTGCAGCAGT 340
consensus_14143#3      CTGCCGTAAGTGAATTTCCAGCATTGGACATAACGGCATTGAACAAGTTTTTGCAGCAGT 281
consensus_14143#1      CTGCCGTAAGTGAATTTCCAGCATTGGACATAACGGCATTGAACAAGTTTTTGCAGCAGT 467
consensus_14143#0      CTGCCGTAAGTGAATTTCCAGCATTGGACATAACGGCATTGAACAAGTTTTTGCAGCAGT 1676
consensus_14143#4      AATACA-ATATCAACAGCATGGATTAGCTCCAGCA--AACAAGCATATATTAGCTGCAAT 274
                           *  *  * **   *  * *** *    * *   *   * **  * ** ** *** *

consensus_14143#2      GATGGA-AGTATTGCGGCGGCGACGATAATCTGCAGCCATCACATGCCTTTGTTGAGCT- 398
consensus_14143#3      GATGGA-AGTATTGCGGCGGCGACGATAATCTGCAGCCATCACATGCCTTTGTTGAGCT- 339
consensus_14143#1      GATGGA-AGTATTGCGGCGGCGACGATAATCTGCAGCCATCACATGCCTTTGTTGAGCT- 525
consensus_14143#0      GATGGA-AGTATTGCGGCGGCGACGATAATCTGCAGCCATCACATGCCTTTGTTGAGCT- 1734
consensus_14143#4      GCTGCTCAAGGTAGCAGCGTTGTC--CCATCCTCTGCGAA-AGTTGACTTTTTAAAGCTC 331
                       * **   *   * ** ***  * *    ***  * ** *  *  ** **** *  **** 

consensus_14143#2      -GGGATGAGAGAAACGCCCCACAGTACTATACAGAGACGTACTTGCATTCAGGCTTACA- 456
consensus_14143#3      -GGGATGAGAGAAACGCCCCACAGTACTATACAGAGACGTACTTGCATTCAGGCTTACA- 397
consensus_14143#1      -GGGATGAGAGAAACGCACCACAGTACTATACAGAGACGTACTTGCATTCAGGCTTACA- 583
consensus_14143#0      -GGGATGAGAGAAACGCACCACAGTACTATACATAGACGTACTTGCATTCAGGCTTACAC 1793
consensus_14143#4      CAGAATGGCAGTGATAT-TCGTGGTGTTGC-TGTTGGTGGGGTCGAAGGCGAGCCCGTAA 389
                         * ***  **  *     *   **  *       *  *   * * *  *  **    * 

consensus_14143#2      -----------TGGTTTTGACTTTTCGGCTTTACTTGGTCTTTGTTTGGTATGGAAATGT 505
consensus_14143#3      -----------TGGTTTTGACTTTTCGGCTTTACTTGGTCTTTGTTTGGTATGGAAATGT 446
consensus_14143#1      -----------TGGTTTTGACTTTTCGGCTTTACTTGGTCTTTGTTTGGTATGGAAATGT 632
consensus_14143#0      ATAATATTACATGGTTTTGACTTTTCGGCTTTACTTGGTCTTTGTTTGGTATGGAAATGT 1853
consensus_14143#4      ATCTC----ACTGAGCCTGTTACTGAAGCAATAGCT--TCTGCATTTGCTGCATGGTTAT 443
                                  **    **    *   **  **  *  ***   **** *       * *

consensus_14143#2      CAAGCAAGGAA------GACTAATTTTCGTGTTTTAAAGAAAATATGCAAAGTAGTTGTC 559
consensus_14143#3      CAAGCAAGGAA------GACTAATTTTCGTGTTTTAAAGAAAATATGCAAAGTAGTTGTC 500
consensus_14143#1      CAAGCAAGGAA------GACTAATTTTCGTGTTTTAAAGAAAATATGCAA-GTAGTTGTC 685
consensus_14143#0      CAAACAAGGAA------GACTAATTTTCGTGTTTTAAAGAAAATATACAAAGTAGTTGTC 1907
consensus_14143#4      TAAACAAGAAGAAAGCGGATGGATGGAGACGTTTAAGAATTTCTGTTGGACATGATTCTC 503
                        ** **** *       **   **      **** * *     * *   *  *  ** **

consensus_14143#2      AAGAATC--GTATACCATCATCAATGTGTTTTCGGATTGCTTATATCGTCATCAGAGTGC 617
consensus_14143#3      AAGAATC--GTATACCATCATCAATGTGTTTTCGGATTGCTTAAATCGTCATCAGAGTGC 558
consensus_14143#1      AAGAATC--GTATACCATCATCA-TGTGTTTTCGGATTGCTTATATCGTCATCAGAGTGC 742
consensus_14143#0      AGGAATCTTATATACCATCGTCAATGTGTTTTCGGATTGCTTATATCGTCATCAGAGTGC 1967
consensus_14143#4      GAATTTCT-GCACATAAATTGCAGGATGCAGTT--ACTCTTGGAATTACCACTGCAGGGC 560
                            **    * *  *    **   **   *   * *  *   **   **    ** **

consensus_14143#2      TTAAAGACCTG-ATTTTGCGGAGGTTTTTGGGACAATGTTGTCGTCAAATGAAAGTATTT 676
consensus_14143#3      TTAAAGACCTG-ATTTTGCGGAGGTTTTTGGGACAATGTTGTCGTCAAATGAAAGTATTT 617
consensus_14143#1      TTAAAGACCTG-ATTTTGCGGAGGTTTTTGGGACA-TGTTGTCGTCAAATGAAAGTATTT 800
consensus_14143#0      TGTGAAGGCAG-TC--------GGTTTTCGGAACGATGTTATCATCAAATGAAAATATTT 2018
consensus_14143#4      ATGATGTTTTACAATTTGGATTGGCTTCANCNNNNNNNNTGTTCNNNNN----------- 609
                                             ** **            * *                  

consensus_14143#2      CCTGTT-----------AAAAAAAAAAAA--------------- 694
consensus_14143#3      CCTGTT-----------AAAAAAAAAAAAA-------------- 636
consensus_14143#1      CCTGTTTCTGTTGTCTTAAAAAAAAAAAGA-------------- 830
consensus_14143#0      CATGTTTCTGTTGTCTTGCTCGTATAAATTTTCATGGTTATTGG 2062
consensus_14143#4      --------------------------------------------