cluster # 14156

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Oryza sativa
cluster # 14156 cluster # 14156 Sequences # 15 consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_14156#0 length = 1246 sequences # 8
consensus_14156#1 length = 853 sequences # 3

consensus_14156#2 length = 535 sequences # 1
consensus_14156#3 length = 367 sequences # 1
consensus_14156#4 length = 167 sequences # 2

consensusID : consensus_14156#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1246
fasta sequence

                              [CAAAACCCACGCCGCCGCCGCCGTCTCTTCCCTCCCTTCTCCGCCGCAGCCGCCGTATCCCCCCTCTCTCTCCGGGAGCTGAAAGCGCCCGAGGAGGAGATCAGGTTCTTTGGCCATGGTGGGCTGGCGGGCGGCGGGCGGCGCTCGTGCCGTTCTTCGCCGGCTCAGCGCGGCGGCGGAGGCGGCGGCGAAGCAG-GACGGCCGTGTGTTCGCTGCCAGCTATAGCGGCAGCAGTGGCGGCGTGAATGCTCCGTTTGGCTTGGGCCAATATGCAAACCTTTTGAGGGCACAAGCTTTTGCATCCAGGGGAGTCGCGCTGAACTTCCATCAGCTGATCCGCAATGCTGGAATATCTACCACAAGGAACCTGCTTGCTGCAGATGATGCTATGGTTCCTGTTTCTTCTCCTTTGACACCTCCACTTGGTGATGGAGAACAAACTGACAAAAAGGGAGCAATTGTTAAGCGGCTGAAGGTCCAAGCCATCAAGAAGGATATCAAGCAGAGCCCCAAGAAGGTGAATCTGGTAGCAAAGCTGGTTCGAGGAATGCGTGTGGAAGATGCCCTGTTGCAGTTGCAAGTGACAGTTAAAAGGGCTGCAAAAACTGTATATCAGGTGATTCATTCTGCTCGTGCCAATGCAGCTCACAATCACGGACTGGATCCTGATAAACTTATTGTGGAAGAGGCTTTTGTTGGGAAAGGACTTTACCTGAAGAGGTTGTCCTACCATGCCAAAGGGCGGTGTGGCGTCATGGTGAGACCGAGGTGCAGACTGACAGTAGTGGTTCGAGAGGCTACCGCTGAGGAAGAGGCAAAGATCGCGAAACTCAGAGTCAGCAACTATAAGAAGCTGACCAGAAAGGAGAAGCAGCTAATGCCGCACCGTCTTATCGAGGTTAGCCCGAGGTGGGCTCGCAAGAGGAAAGAGGAGGCTGGTGCTGCTGCGTAGCATG-GCTTCCCATTTGCAGGATGTCTGCCTTCATTGGCCTTGAAGCGGTGAGTAGCCGCATATGCTGAAATTTACCCAAGAACAATTGTAGCTCTCTCAAGAATGAATTCAAAGGTC-TCATTTGTCAGGCCTGTCTTTGTTCTGTTTGTTTCATCTGTATGAAATTTGTC-TCATGAAGCATAGGAAACTGTGGCATTGCCCACGATTCTACTCAGAATGAATAATGTCACCTCTGATATTTTGTTCGGCCTGCCTATTTTTATAGTTGTCTTCGCTGAAGATCCGTATTCAAAG]

[+] EMBL AK073157             [CAAAACCCACGCCGCCGCCGCCGTCTCTTCCCTCCCTTCTCCGCCGCAGCCGCCGTATCCCCCCTCTCTCTCCGGGAGCTGAAAGCGCCCGAGGAGGAGATCAGGTTCTTTGGCCATGGTGGGCTGGCGGGCGGCGGGCGGCGCTCGTGCCGTTCTTCGCCGGCTCAGCGCGGCGGCGGAGGCGGCGGCGAAGCAG GACGGCCGTGTGTTCGCTGCCAGCTATAGCGGCAGCAGTGGCGGCGTGAATGCTCCGTTTGGCTTGGGCCAATATGCAAACCTTTTGAGGGCACAAGCTTTTGCATCCAGGGGAGTCGCGCTGAACTTCCATCAGCTGATCCGCAATGCTGGAATATCTACCACAAGGAACCTGCTTGCTGCAGATGATGCTATGGTTCCTGTTTCTTCTCCTTTGACACCTCCACTTGGTGATGGAGAACAAACTGACAAAAAGGGAGCAATTGTTAAGCGGCTGAAGGTCCAAGCCATCAAGAAGGATATCAAGCAGAGCCCCAAGAAGGTGAATCTGGTAGCAAAGCTGGTTCGAGGAATGCGTGTGGAAGATGCCCTGTTGCAGTTGCAAGTGACAGTTAAAAGGGCTGCAAAAACTGTATATCAGGTGATTCATTCTGCTCGTGCCAATGCAGCTCACAATCACGGACTGGATCCTGATAAACTTATTGTGGAAGAGGCTTTTGTTGGGAAAGGACTTTACCTGAAGAGGTTGTCCTACCATGCCAAAGGGCGGTGTGGCGTCATGGTGAGACCGAGGTGCAGACTGACAGTAGTGGTTCGAGAGGCTACCGCTGAGGAAGAGGCAAAGATCGCGAAACTCAGAGTCAGCAACTATAAGAAGCTGACCAGAAAGGAGAAGCAGCTAATGCCGCACCGTCTTATCGAGGTTAGCCCGAGGTGGGCTCGCAAGAGGAAAGAGGAGGCTGGTGCTGCTGCGTAGCATG GCTTCCCATTTGCAGGATGTCTGCCTTCATTGGCCTTGAAGCGGTGAGTAGCCGCATATGCTGAAATTTACCCAAGAACAATTGTAGCTCTCTCAAGAATGAATTCAAAGGTC TCATTTGTCAGGCCTGTCTTTGTTCTGTTTGTTTCATCTGTATGAAATTTGTC TCATGAAGCATAGGAAACTGTGGCATTGCCCACGATTCTACTCAGAATGAATAAT                                                                     ]
[+] EMBL OSS2054A             [                                                                                                                 CCATGGTGGGCTGGCGGGCGGCGGGCGGCGCTCGTNCCGTTCTTCGCCGGCTCAGCGCGGCGGCGGAGGCGGCGGCGAA NAGCGACGGCCGTGTGTTCGCTGCCAGCTATAGCGGCANAGGTNGCGGCGTGAATTCTCCGTTTGGCTTGGGCCAATATGCAAACCTTTTGAGGGCACAAGCTTTTGCATCCAGGGGAGTCGCGCTGAACTTCCATCAGCTGATCCGCAATGCTGGAATATCTACCACAAGGAACCTGCTTGCTGCAGATGATGCTATGGTTCCTGTTTCTTCTCCTTTGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CB685713             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ATTGTTAAGCGGCTGAAGGTCCAAGCCATCAAGAAGGATATCAAGCAGAGCCCCAAGAAGGTGAATCTGGTAGCAAAGCTGGTTCGAGGAATGCGTGTGGAAGATGCCCTGTTGCAGTTGCAAGTGACAGTTAAAAGGGCTGCAAAAACTGTATATCAGGTGATTCATTCTGCTCGTGCCAATGCAGCTCACAATCACGGACTGGATCCTGATAAACTTATTGTGGAAGAGGCTTTTGTTGGGAAAGGACTTTACCTGAAGAGGTTGTCCTACCATGCCAAAGGGCGGTGTGGCGTCATGGTGAGACCGAGGTGCAGACTGACAGTAGTGGTTCGAGAGGCTACCGCTGAGGAAGAGGCAAAGATCGCGAAACTCAGAGTCAGCAACTATAAGAAGCTGACCAGAAAGGAGAAGCAGCTAATGCCGCACCGTCTTATCGAGGTTAGCCCGAGGTGGGCTCGCAAGAGGAAAGAGGAGGCTGGTGCTGCTGCGTAGCATG GCTTCCCATTTGCAGGATGTCTGCCTTCATTGGCCTTGAAGCGGTGAGTAGCCGCATATGCTGAAATTTACCCAAGAACAATTGTAGCTCTCTCAAGAATGAATTCAAAGGTC TCATTTGTCAGGCCTGTCTTTGTTCTGTTTGTTTCATCTGTATGAAATTTGTC TCATGAAGCATAGGAAACTGTGGCATTGCCCACGATTCTACTCAGAATGAATAATGTCACCTCTGATATTTTGTTCGGCCTGCCTATTTTGATAGTTGTCTTCGCTGAAGATCCGTATTCAAAG]
[+] EMBL CA765382             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TCATTCTGCTCGTGCCAATGCAGCTCACAATCACGGACTGGATCCTGATAAACTTATTGTGGAAGAGGCTTTTGTTGGGAAAGGACTTTACCTGAAGAGGTTGTCCTACCATGCCAAAGGGCGGTGTGGCGTCATGGTGAGACCGAGGTGCAGACTGACAGTAGTGGTTCGAGAGGCTACCGCTGAGGAAGAGGCAAAGATCGCGAAACTCAGAGTCAGCAACTATAAGAAGCTGACCAGAAAGGAGAAGCAGCTAATGCCGCACCGTCTTATCGAGGTTAGCCCGAGGTGGGCTCGCAAGAGGAAAGAGGAGGCTGGTGCTGCTGCGTAGCATG GCTTCCCATTTGCAGGATGTCTGCCTTCATTGGCCTTGAAGCGGTGAGTAGCCGCATATACTGAAATTTACCCAAGAACAATTGTAGCTCTCTCAAGAATGAATTCAAAGGTC TCATTTGTCAGGCCTGTCTTTGTTCTGTTTGTTTCATCTGTATGAAATTTGTC TCATGAAGCATAGAAAACTGTGGCATTGCCCACGATTCTACTCAGAATGAATAATGTCACCTCTGATGTTTTGTTCGGCCTGCCTATTTTTATAGNTGTCTTC                     ]
[+] EMBL OSC20641             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CGTGCCAATGCAGCTCACAATCACGGACTGGATCCTGATAAACTTATTGTGGAAGAGGCTTTTGTTGGGAAAGGACTTTACCTGAAGAGGTTGTCCTACCATGCCAAAGGGCGGTGTGGCGTCATGGTGAGACCGAGGTGCAGACTGACAGTAGTGGTTCGAGAGGCTACCGCTGAGGAAGAGGCAAAGATCGCGAAACTCAGAGTCAGCAACTATAAGAAGCTGACCAGAAAGGAGAAGCAGCTAATGCCGCACCGTCTTATCGAGGTTAGCCCGAGGTGGGCTCGCAAGANGAAAGAGGAGGCTGGTNCTGCTGCGTAG ATGNGCTTCCCATTTGCAGGA                                                                                                                                                                                                                                                                                   ]
[+] EMBL BI799786             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CTTATTGTGGAAGAGGCTTTTGTTGGGAAAGGACTTTACCTGAAGAGGTTGTCCTACCATGCCAAAGGGCGGTGTGGCGTCATGGTGAGACCGAGGTGCAGACTGACAGTAGTGGTTCGAGAGGCTACCGCTGAGGAAGAGGCAAAGATCGCGAAACTCAGAGTCAGCAACTATAAGAAGCTGACCAGAAAGGAGAAGCAGCTAATGCCGCACCGTCTTATCGAGGTTAGCCCGAGGTGGGCTCGCAAGAGGAAAGAGGAGGCTGGTGCTGCTGCGTAGCATG GCTTCCCATTTGCAGGATGTCTGCCTTCATTGGCCTTGAAGCGGTGAGTAGCCGCATATACTGAAATTTACCCAAGAACAATTGTAGCTCTCTCAAGAATGAATTCAAAGGTC TCATTTGTCAGGCCTGTCTTTGTTCTGTTTGTTTCATCTGTATGAAATTTGTC TCATGAAGCATAGAAAACTGTGCCATTGCCCACGATTCTACTCAGAAaaa                                                                          ]
[+] EMBL CB683856             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             AATGCCGCACCGTCTTATCGAGGTTAGCCCGAGGTGGGCTCGCAAGAGGAAAGAGGAGGCTGGTGCTGCTGCGTAGCATG GCTTCCCATTTGCAGGATGTCTGCCTTCATTGGCCTTGAAGCGGTGAGTAGCCGCATATGCTGAAATTTACCCAAGAACAATTGTAGCTCTCTCAAGAATGAATTCAAAGGTC TCATTTGTCAGGCCTGTCTTTGTTCTGTTTGTTTCATCTGTATGAAATTTGTC TCATGAAGCATAGGAAACTGTGGCATTGCCCACGATTCTACTCAGAATGAATAATGTCACCTCTGATATTTTGT                                                  ]
[-] EMBL AU225487             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TGGGCTCGCAAGAGGAAAGAGGAGGCTGGTGCTGCTGCGTAGCATG GCTTCCCATTTGCAGGATGTCTGCCTTCATTGGCCTTGAAGCGGTGAGTAGCCGCATATGCTGAAATTTACCCAAGAACAATTGTAGCTCTCTCAAGAATGAATTCAAAGGTCTTCATTTGTCAGGCCTGTCTTTGTTCTGTTTGTTTCATCTGTATGAAATTTGTCTTCATGAAGCATAGGAAACTGTGGCATTGCCCACGATTCTACTCAGAATGAATAATGTCACCTCTGATATTTTGTTCGGCCTGCCTATTTTTATAGTTGagcggc                    ]




>consensus_14156#0
CAAAACCCACGCCGCCGCCGCCGTCTCTTCCCTCCCTTCTCCGCCGCAGCCGCCGTATCC
CCCCTCTCTCTCCGGGAGCTGAAAGCGCCCGAGGAGGAGATCAGGTTCTTTGGCCATGGT
GGGCTGGCGGGCGGCGGGCGGCGCTCGTGCCGTTCTTCGCCGGCTCAGCGCGGCGGCGGA
GGCGGCGGCGAAGCAGGACGGCCGTGTGTTCGCTGCCAGCTATAGCGGCAGCAGTGGCGG
CGTGAATGCTCCGTTTGGCTTGGGCCAATATGCAAACCTTTTGAGGGCACAAGCTTTTGC
ATCCAGGGGAGTCGCGCTGAACTTCCATCAGCTGATCCGCAATGCTGGAATATCTACCAC
AAGGAACCTGCTTGCTGCAGATGATGCTATGGTTCCTGTTTCTTCTCCTTTGACACCTCC
ACTTGGTGATGGAGAACAAACTGACAAAAAGGGAGCAATTGTTAAGCGGCTGAAGGTCCA
AGCCATCAAGAAGGATATCAAGCAGAGCCCCAAGAAGGTGAATCTGGTAGCAAAGCTGGT
TCGAGGAATGCGTGTGGAAGATGCCCTGTTGCAGTTGCAAGTGACAGTTAAAAGGGCTGC
AAAAACTGTATATCAGGTGATTCATTCTGCTCGTGCCAATGCAGCTCACAATCACGGACT
GGATCCTGATAAACTTATTGTGGAAGAGGCTTTTGTTGGGAAAGGACTTTACCTGAAGAG
GTTGTCCTACCATGCCAAAGGGCGGTGTGGCGTCATGGTGAGACCGAGGTGCAGACTGAC
AGTAGTGGTTCGAGAGGCTACCGCTGAGGAAGAGGCAAAGATCGCGAAACTCAGAGTCAG
CAACTATAAGAAGCTGACCAGAAAGGAGAAGCAGCTAATGCCGCACCGTCTTATCGAGGT
TAGCCCGAGGTGGGCTCGCAAGAGGAAAGAGGAGGCTGGTGCTGCTGCGTAGCATGGCTT
CCCATTTGCAGGATGTCTGCCTTCATTGGCCTTGAAGCGGTGAGTAGCCGCATATGCTGA
AATTTACCCAAGAACAATTGTAGCTCTCTCAAGAATGAATTCAAAGGTCTCATTTGTCAG
GCCTGTCTTTGTTCTGTTTGTTTCATCTGTATGAAATTTGTCTCATGAAGCATAGGAAAC
TGTGGCATTGCCCACGATTCTACTCAGAATGAATAATGTCACCTCTGATATTTTGTTCGG
CCTGCCTATTTTTATAGTTGTCTTCGCTGAAGATCCGTATTCAAAG

consensusID : consensus_14156#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 853
fasta sequence

                              [CACTAAGGGAATACTTGGCTCCGCAGCCG-CGTATCCCCCTCTCTCTCCGGGAGCTGAAAGCGCCCGAGGAGGAGATCAGGTTCTTTGGCCATGGTGGGCTGGAGGGCGGCGGGCGGCGCTCGTGCCGTTCTTCGCCGGCTCAGCGCGGCGGCGGAGGCGGCGGCGAAGCAGGACGGCCGTGTGTTCGCTGCCAGCTATAGCGGCAGCAGTGGCGGCGTGAATGCTCCGTTTGGCTTGGGCCAATATGCAAACCTTTTGAGGGCACAAGCTTTTGCATCCANGGGAGTCGCGCTGAACTTCCATCAGCTGATCCGCAATGCTGGAATATCTACCACAAGGAACCTGCTTGCTGCAGATGATGCTATGGTTCCTGTTTCTTCTCCTTTGACACCTCCACTTGGTGATGGAGAACAAACTGACAAAAAGGGAGCAATTGTTAAGCGGCTGAAGGTCCAAGCCATCAAGAAGGATATCAAGCAGAGCCCCAAGAAGGTGAATCTGGTAGCAAAGCTGGTTCGAGGAATGCGTGTGGAAGATGCCCTGTTGCAGTTGCAAGTGACAGTTAAAAGGGCTGCAAAAACTGTATATCAGGTGATTCATTCTGCTCGTGCCAATGCAGCTCACAATCACGGACTGGATCCTGATAAACTTATTGTGGAAGAGGCTTTTGTTGGGAAAGGACTTTACCTGAAGAGGTTGTCCTACCATGCCAAAGGGCGGTGTGGCGTCATGGTGAGACCGAGGTGCAGACTGACAGTAGTGGTTCGAGA-GGTTACCCGCTGAGGAAGAGGCAAAGATCGCGAAACTCAGAGTCGCAACTAATAAAAACTGACACAAAGGGAAGCGCTATTGC]

[+] EMBL CB964865             [CACTAAGGGAATACTTGGCTCCGCAGCCG CGTATCCCCCTCTCTCTCCGGGAGCTGAAAGCGCCCGAGGAGGAGATCAGGTTCTTTGGCCATGGTGGGCTGGAGGGCGGCGGGCGGCGCTCGTGCCGTTCTTCGCCGGCTCAGCGCGGCGGCGGAGGCGGCGGCGAAGCAGGACGGCCGTGTGTTCGCTGCCAGCTATAGCGGCAGCAGTGGCGGCGTGAATGCTCCGTTTGGCTTGGGCCAATATGCAAACCTTTTGAGGGCACAAGCTTTTGCATCCANGGGAGTCGCGCTGAACTTCCATCAGCTGATCCGCAATGCTGGAATATCTACCACAAGGAACCTGCTTGCTGCAGATGATGCTATGGTTCCTGTTTCTTCTCCTTTGACACCTCCACTTGGTGATGGAGAACAAACTGACAAAAAGGGAGCAATTGTTAAGCGGCTGAAGGTCCAAGCCATCAAGAAGGATATCAAGCAGAGCCCCAAGAAGGTGAATCTGGTAGCAAAGCTGGTTCGAGGAATGCGTGTGGAAGATGCCCTGTTGCAGTTGCAAGTGACAGTTAAAAGGGCTGCAAAAACTGTATATCAGGTGATTCATTCTGCTCGTGCCAATGCAGCTCACAATCACGGACTGGATCCTGATAAACTTATTGTGGAAGAGGCTTTTGTTGGGAAAGGACTTTACCTGAAGAGGTTGTCCTACCATGCCAAAGGGCGGTGTGGCGTCATGGTGAGAACGAGGTGCAGACTGACAGTAGTGGTTCGAGA GGTTAC                                                                             ]
[+] EMBL CB966166             [        GAATAACTGGCTCCGCAGCCGCCGTATCCCCCTCTCTCTCCGGGAGCTGAAAGCGCCCGAGGAGGAGATCAGGTTCTTTGGCCATGGTGGGCTGGAGGGCGGCGGGCGGCGCTCGTGCCGTTCTTCGCCGGCTCAGCGCGGCGGCGGAGGCGGCGGCGAAGCAGGACGGCCGTGTGTTCGCTGCCAGCTATAGCGGCAGCAGTGGCGGCGTGAATGCTCCGTTTGGCTTGGGCCAATATGCAAACCTTTTGAGGGCACAAGCTTTTGCATCCAGGGGAGTCGCGCTGAACTTCCATCAGCTGATCCGCAATGCTGGAATATCTACCACAAGGAACCTGCTTGCTGCAGATGATGCTATGGTTCCTGTTTCTTCTCCTTTGACACCTCCACTTGGTGATGGAGAACAAACTGACAAAAAGGGAGCAATTGTTAAGCGGCTGAAGGTCCAAGCCATCAAGAAGGATATCAAGCAGAGCCCCAAGAAGGTGAATCTGGTAGCAAAGCTGGTTCGAGGAATGCGTGTGGAAGATGCCCTGTTGCAGTTGCAAGTGACAGTTAAAAGGGCTGCAAAAACTGTATATCAGGTGATTCATTCTGCTCGTGCCAATGCAGCTCACAATCACGGACTGGATCCTGATAAACTTATTGTGGAAGAGGCTTTTGTTGGGAAAGGACTTTACCTGAAGAGGTTGTCCTACCATGCCAAAGGGCGGTGTGGCGTCATGGTGAGACCGAGGTGCAGACTGACAGTAGTGGTTCGAGAGGGCTA CCGCTGAGGAAGAGGCAAAGATCGCGAAACTCAGAGTCGCAACTAATAAAAACTGACACAAAGGGAAGCGCTATTGC]
[+] EMBL CB685712             [                                                                                                                                                                                                                                                                                                                                           ACCCCAAGGAATCTGCTTGCTGTAGATGATGCTATGGTTCCTGGTTCTTCTCCTTTGACACCTCCACTTGGTGATGGAGAACAAACTGACAAAAAGGGAGCAATTGTTAAGCGGCTGAAGGTCCAAGCCATCAAGAAGGATATCAAGCAGAGCCCCAAGAAGGTGAATCTGGTAGCAAAGCTGGTTCGAGGAATGCGTGTGGAAGATGCCCTGTTGCAGTTGCAAGTGACAGTTAAAAGGGCTGCAAAAACTGTATATCAGGTGATTCATTCTGCTCGTGCCAATGCAGCTCACAATCACGGACTGGATCCTGATAAACTTATTGTGGAAGAGGCTTTTGTTGGGAAAGGACTTTACCTGAAGAGGTTGTCCTACCATGCCAAAGGGCGGTGTGGCGTCATGGTGAGACCGAGGTGCAGACTGACAGTAGTGGCTC                                                                                        ]




>consensus_14156#1
CACTAAGGGAATACTTGGCTCCGCAGCCGCGTATCCCCCTCTCTCTCCGGGAGCTGAAAG
CGCCCGAGGAGGAGATCAGGTTCTTTGGCCATGGTGGGCTGGAGGGCGGCGGGCGGCGCT
CGTGCCGTTCTTCGCCGGCTCAGCGCGGCGGCGGAGGCGGCGGCGAAGCAGGACGGCCGT
GTGTTCGCTGCCAGCTATAGCGGCAGCAGTGGCGGCGTGAATGCTCCGTTTGGCTTGGGC
CAATATGCAAACCTTTTGAGGGCACAAGCTTTTGCATCCANGGGAGTCGCGCTGAACTTC
CATCAGCTGATCCGCAATGCTGGAATATCTACCACAAGGAACCTGCTTGCTGCAGATGAT
GCTATGGTTCCTGTTTCTTCTCCTTTGACACCTCCACTTGGTGATGGAGAACAAACTGAC
AAAAAGGGAGCAATTGTTAAGCGGCTGAAGGTCCAAGCCATCAAGAAGGATATCAAGCAG
AGCCCCAAGAAGGTGAATCTGGTAGCAAAGCTGGTTCGAGGAATGCGTGTGGAAGATGCC
CTGTTGCAGTTGCAAGTGACAGTTAAAAGGGCTGCAAAAACTGTATATCAGGTGATTCAT
TCTGCTCGTGCCAATGCAGCTCACAATCACGGACTGGATCCTGATAAACTTATTGTGGAA
GAGGCTTTTGTTGGGAAAGGACTTTACCTGAAGAGGTTGTCCTACCATGCCAAAGGGCGG
TGTGGCGTCATGGTGAGACCGAGGTGCAGACTGACAGTAGTGGTTCGAGAGGTTACCCGC
TGAGGAAGAGGCAAAGATCGCGAAACTCAGAGTCGCAACTAATAAAAACTGACACAAAGG
GAAGCGCTATTGC

consensusID : consensus_14156#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 535
fasta sequence

                              [GTCCAAGCCATCAAGAAGGATATCAAGCAGAGCCCCAAGAAGGTGAATCTGGTAGCAAAGTTGGTTCGAGGAATGCGTGTGGAAGATGCCCTGTTGCAGTTGCAAGTGACAGTTAAAAGGGCTGCAAAAACTGTATATCAGGTTCTGTAGTTAACAAAATTTTGTCCTGCAACTGCTCCTTGTGGTAGATAGGGTCAGGTGTGACCAATATTTTTCATGATCATTCCTTTCTATCAATCACTGCAGGTGATTCATTCTGCTCGTGCCAATGCAGCTCACAATCACGGACTGGATCCTGATAAACTTATTGTGGAAGAGGCTTTTGTTGGGAAAGGACTTTACCTGAAGAGGTTGTCCTACCATGCCAAAGGGCGGTGTGGCGTCATGGTGAGACCGAGGTGCAGACTGACAGTAGTGGTTCGAGAGGCTACCGCTGAGGAAGAGGCAAAGATCGCGAAACTCAGAGTCAGCAACTATAAGAAGCTGACCAGAAAGGAGAAGCAGCTAATGCCGCACCGTCTTATCGAGGTTAGCC]

[+] EMBL CA997854             [GTCCAAGCCATCAAGAAGGATATCAAGCAGAGCCCCAAGAAGGTGAATCTGGTAGCAAAGTTGGTTCGAGGAATGCGTGTGGAAGATGCCCTGTTGCAGTTGCAAGTGACAGTTAAAAGGGCTGCAAAAACTGTATATCAGGTTCTGTAGTTAACAAAATTTTGTCCTGCAACTGCTCCTTGTGGTAGATAGGGTCAGGTGTGACCAATATTTTTCATGATCATTCCTTTCTATCAATCACTGCAGGTGATTCATTCTGCTCGTGCCAATGCAGCTCACAATCACGGACTGGATCCTGATAAACTTATTGTGGAAGAGGCTTTTGTTGGGAAAGGACTTTACCTGAAGAGGTTGTCCTACCATGCCAAAGGGCGGTGTGGCGTCATGGTGAGACCGAGGTGCAGACTGACAGTAGTGGTTCGAGAGGCTACCGCTGAGGAAGAGGCAAAGATCGCGAAACTCAGAGTCAGCAACTATAAGAAGCTGACCAGAAAGGAGAAGCAGCTAATGCCGCACCGTCTTATCGAGGTTAGCC]




>consensus_14156#2
GTCCAAGCCATCAAGAAGGATATCAAGCAGAGCCCCAAGAAGGTGAATCTGGTAGCAAAG
TTGGTTCGAGGAATGCGTGTGGAAGATGCCCTGTTGCAGTTGCAAGTGACAGTTAAAAGG
GCTGCAAAAACTGTATATCAGGTTCTGTAGTTAACAAAATTTTGTCCTGCAACTGCTCCT
TGTGGTAGATAGGGTCAGGTGTGACCAATATTTTTCATGATCATTCCTTTCTATCAATCA
CTGCAGGTGATTCATTCTGCTCGTGCCAATGCAGCTCACAATCACGGACTGGATCCTGAT
AAACTTATTGTGGAAGAGGCTTTTGTTGGGAAAGGACTTTACCTGAAGAGGTTGTCCTAC
CATGCCAAAGGGCGGTGTGGCGTCATGGTGAGACCGAGGTGCAGACTGACAGTAGTGGTT
CGAGAGGCTACCGCTGAGGAAGAGGCAAAGATCGCGAAACTCAGAGTCAGCAACTATAAG
AAGCTGACCAGAAAGGAGAAGCAGCTAATGCCGCACCGTCTTATCGAGGTTAGCC

consensusID : consensus_14156#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 367
fasta sequence

                              [CCGCACCGTCTTATCGAGGTTAGCCCGAGGTGGGCTCGCAAGAGGAAAGAGGAGGCTGGTGCTGCTGCGTAGCATGGCTTCCCATTTGCAGGATGTCTGCCTTCATTGGCCTTGAAGCGGTGAGTAGCCGCATATGCTGAAATTTACCCAAGAACAATTGTAGCTCCCTCAAGAATGAATTCAAAGGTCTCATTTGTCAGGCCTGTCTTTGTTCTGTTTGTTTCATCTGTATGAAATTTGTCTCATGAAGCATAGGAAACTGTGGCATTGCCCACGATTCTACTCAGAATGAATAATGTCACCTCTGATATTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL CF331131             [CCGCACCGTCTTATCGAGGTTAGCCCGAGGTGGGCTCGCAAGAGGAAAGAGGAGGCTGGTGCTGCTGCGTAGCATGGCTTCCCATTTGCAGGATGTCTGCCTTCATTGGCCTTGAAGCGGTGAGTAGCCGCATATGCTGAAATTTACCCAAGAACAATTGTAGCTCCCTCAAGAATGAATTCAAAGGTCTCATTTGTCAGGCCTGTCTTTGTTCTGTTTGTTTCATCTGTATGAAATTTGTCTCATGAAGCATAGGAAACTGTGGCATTGCCCACGATTCTACTCAGAATGAATAATGTCACCTCTGATATTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_14156#3
CCGCACCGTCTTATCGAGGTTAGCCCGAGGTGGGCTCGCAAGAGGAAAGAGGAGGCTGGT
GCTGCTGCGTAGCATGGCTTCCCATTTGCAGGATGTCTGCCTTCATTGGCCTTGAAGCGG
TGAGTAGCCGCATATGCTGAAATTTACCCAAGAACAATTGTAGCTCCCTCAAGAATGAAT
TCAAAGGTCTCATTTGTCAGGCCTGTCTTTGTTCTGTTTGTTTCATCTGTATGAAATTTG
TCTCATGAAGCATAGGAAACTGTGGCATTGCCCACGATTCTACTCAGAATGAATAATGTC
ACCTCTGATATTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAA

consensusID : consensus_14156#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 167
fasta sequence

                              [AAAGGTCTCATTTGTCAGGCCTGTCTTTGTTCTGTTTGTTTCATCTGTATGAAATTTGTCTCATGAAGCATAGGAAACTGTGGCATTGCCCACGATTCTACTCAGAATGAATAATGTCACCTCTAAAAAAAAAAAAAAAAAAAAAAAACAAAGTCATGCCGTTACGT]

[+] EMBL CF332099             [AAAGGTCTCATTTGTCAGGCCTGTCTTTGTTCTGTTTGTTTCATCTGTATGAAATTTGTCTCATGAAGCATAGGAAACTGTGGCATTGCCCACGATTCTACTCAGAATGAATAATGTCACCTCTAAAAAAAAAAA                                ]
[-] EMBL CF332100             [ AAGGTCTCATTTGTCAGGCCTGTCTTTGTTCTGTTTGTTTCATCTGTATGAAATTTGTCTCATGAAGCATAGGAAACTGTGGCATTGCCCACGATTCTACTCAGAATGAATAATGTCACCTCTAAAAAAAAAAAAAAAAAAAAAAAACAAAGTCATGCCGTTACGT]




>consensus_14156#4
AAAGGTCTCATTTGTCAGGCCTGTCTTTGTTCTGTTTGTTTCATCTGTATGAAATTTGTC
TCATGAAGCATAGGAAACTGTGGCATTGCCCACGATTCTACTCAGAATGAATAATGTCAC
CTCTAAAAAAAAAAAAAAAAAAAAAAAACAAAGTCATGCCGTTACGT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14156#1      --------------------------CACTAAGGGAATACTTGGCTCCGCAGCCGCGTAT 34
consensus_14156#2      ------------------------------------------------------------
consensus_14156#0      CAAAACCCACGCCGCCGCCGCCGTCTCTTCCCTCCCTTCTCCGCCGCAGCCGCCGTAT-C 59
consensus_14156#3      ------------------------------------------------------------
consensus_14156#4      ------------------------------------------------------------
                                                                                   

consensus_14156#1      CCCCCTCTCTCTCCGGGAGCTGAAAGCGCCCGAGGAGGAGATCAGGTTCTTTGGCCATGG 94
consensus_14156#2      ------------------------------------------------------------
consensus_14156#0      CCCCCTCTCTCTCCGGGAGCTGAAAGCGCCCGAGGAGGAGATCAGGTTCTTTGGCCATGG 119
consensus_14156#3      ------------------------------------------------------------
consensus_14156#4      ------------------------------------------------------------
                                                                                   

consensus_14156#1      TGGGCTGGAGGGCGGCGGGCGGCGCTCGTGCCGTTCTTCGCCGGCTCAGCGCGGCGGCGG 154
consensus_14156#2      ------------------------------------------------------------
consensus_14156#0      TGGGCTGGCGGGCGGCGGGCGGCGCTCGTGCCGTTCTTCGCCGGCTCAGCGCGGCGGCGG 179
consensus_14156#3      ------------------------------------------------------------
consensus_14156#4      ------------------------------------------------------------
                                                                                   

consensus_14156#1      AGGCGGCGGCGAAGCAGGACGGCCGTGTGTTCGCTGCCAGCTATAGCGGCAGCAGTGGCG 214
consensus_14156#2      ------------------------------------------------------------
consensus_14156#0      AGGCGGCGGCGAAGCAGGACGGCCGTGTGTTCGCTGCCAGCTATAGCGGCAGCAGTGGCG 239
consensus_14156#3      ------------------------------------------------------------
consensus_14156#4      ------------------------------------------------------------
                                                                                   

consensus_14156#1      GCGTGAATGCTCCGTTTGGCTTGGGCCAATATGCAAACCTTTTGAGGGCACAAGCTTTTG 274
consensus_14156#2      ------------------------------------------------------------
consensus_14156#0      GCGTGAATGCTCCGTTTGGCTTGGGCCAATATGCAAACCTTTTGAGGGCACAAGCTTTTG 299
consensus_14156#3      ------------------------------------------------------------
consensus_14156#4      ------------------------------------------------------------
                                                                                   

consensus_14156#1      CATCCANGGGAGTCGCGCTGAACTTCCATCAGCTGATCCGCAATGCTGGAATATCTACCA 334
consensus_14156#2      ------------------------------------------------------------
consensus_14156#0      CATCCAGGGGAGTCGCGCTGAACTTCCATCAGCTGATCCGCAATGCTGGAATATCTACCA 359
consensus_14156#3      ------------------------------------------------------------
consensus_14156#4      ------------------------------------------------------------
                                                                                   

consensus_14156#1      CAAGGAACCTGCTTGCTGCAGATGATGCTATGGTTCCTGTTTCTTCTCCTTTGACACCTC 394
consensus_14156#2      --------------GTCCAAGCCATCAAGAAGGATATCAAGCAGAGCCCCAAGA-AGGTG 45
consensus_14156#0      CAAGGAACCTGCTTGCTGCAGATGATGCTATGGTTCCTGTTTCTTCTCCTTTGACACCTC 419
consensus_14156#3      ------------------------------------------------------------
consensus_14156#4      ------------------------------------------------------------
                                                                                   

consensus_14156#1      CACTTGGTGATGGAGAACAAACTGACAAAAAGGGAGCAATTGTTAAGCGGCTGAAGGTCC 454
consensus_14156#2      AATCTGGTAGC--AAAGTTGGTTCGAGGAATGCGTGTGGAAGATGCCCTGTTGCAGTTGC 103
consensus_14156#0      CACTTGGTGATGGAGAACAAACTGACAAAAAGGGAGCAATTGTTAAGCGGCTGAAGGTCC 479
consensus_14156#3      ------------------------------------------------------------
consensus_14156#4      ------------------------------------------------------------
                                                                                   

consensus_14156#1      AAGCCATCAAGAAGGATATCAAGCAGAGCCCCAAGAAGGTGAATCTGGTAGCAAAGCTGG 514
consensus_14156#2      AAGTGACAGTTAAAAGGGCTGCAAAAACTGTATATCAGGTTCTGTAGTTAACAAAATTTT 163
consensus_14156#0      AAGCCATCAAGAAGGATATCAAGCAGAGCCCCAAGAAGGTGAATCTGGTAGCAAAGCTGG 539
consensus_14156#3      -----CCGCACCGTCTTATCGAGGTTAGCCCGAGGTGGGCTCGCAAGAGGAAAGAGGAGG 55
consensus_14156#4      ------------------------------------------------------------
                                                                                   

consensus_14156#1      TTCGAGGAA----TGCGTGTGGAAGAT--GCCCTGTTGCAGTTGCAAGTGACAGTTAAAA 568
consensus_14156#2      GTCCTGCAACTGCTCCTTGTGGTAGATAGGGTCAGGTGTGACCAATATTTTTCATGATCA 223
consensus_14156#0      TTCGAGGAA----TGCGTGTGGAAGAT--GCCCTGTTGCAGTTGCAAGTGACAGTTAAAA 593
consensus_14156#3      CTGGTGCTG---CTGCGTAGCATGGCTTCCCATTTGCAGGATGTCTGCCTTCATTGGCCT 112
consensus_14156#4      ------------------------------------------------------------
                                                                                   

consensus_14156#1      GGGCTGCAAAAACTGTATATCAGGTGATTCATTCTGCTCGTGCCAATGCAGCTCACAATC 628
consensus_14156#2      TTCCTTTCTATCAATCACTGCAGGTGATTCATTCTGCTCGTGCCAATGCAGCTCACAATC 283
consensus_14156#0      GGGCTGCAAAAACTGTATATCAGGTGATTCATTCTGCTCGTGCCAATGCAGCTCACAATC 653
consensus_14156#3      TGAAGCGGTGAGTAGCCGCATATGCTGAAATTTACCCAAGAACAATTGTAGCTCCC---T 169
consensus_14156#4      ------------------------------------------------------------
                                                                                   

consensus_14156#1      ACGGACTGGATCCTGATAAACTTATTGTGGAAGAGGCTTTTGTTGGGAAAGGACTTTACC 688
consensus_14156#2      ACGGACTGGATCCTGATAAACTTATTGTGGAAGAGGCTTTTGTTGGGAAAGGACTTTACC 343
consensus_14156#0      ACGGACTGGATCCTGATAAACTTATTGTGGAAGAGGCTTTTGTTGGGAAAGGACTTTACC 713
consensus_14156#3      CAAGAATGAATTCAAAGGTCTCATTTGTCAGGCCTGTCTTTGTTCTGTTTGTTTCATCTG 229
consensus_14156#4      -------------AAAGGTCTCATTTGTCAGGCCTGTCTTTGTTCTGTTTGTTTCATCTG 47
                                      *        ****       *  ******  *   *     *   

consensus_14156#1      TGAAGAGGTTGTCCTACCATGCCAAAGGGCGGTGTGGCGTCATGGTGAGACCGAGGTGCA 748
consensus_14156#2      TGAAGAGGTTGTCCTACCATGCCAAAGGGCGGTGTGGCGTCATGGTGAGACCGAGGTGCA 403
consensus_14156#0      TGAAGAGGTTGTCCTACCATGCCAAAGGGCGGTGTGGCGTCATGGTGAGACCGAGGTGCA 773
consensus_14156#3      TATGAAATTTGTCTCATGAAGC-ATAGGAAACTGTGGCATTGCC-CACGATTCTACTCAG 287
consensus_14156#4      TATGAAATTTGTCTCATGAAGC-ATAGGAAACTGTGGCATTGCC-CACGATTCTACTCAG 105
                       *    *  *****  *  * ** * ***    ****** *        **      *   

consensus_14156#1      GACTGACAGTAGTGGTTCGAGAGGTTACCCGCTGAGGAAGAGGCAAAGATCGCGAAACTC 808
consensus_14156#2      GACTGACAGTAGTGGTTCGAGAGGCTACC-GCTGAGGAAGAGGCAAAGATCGCGAAACTC 462
consensus_14156#0      GACTGACAGTAGTGGTTCGAGAGGCTACC-GCTGAGGAAGAGGCAAAGATCGCGAAACTC 832
consensus_14156#3      AATGAATAATGTCACCTCTGATATTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 347
consensus_14156#4      AATGAATAATGTCACCTCTAA------AAAAAAAAAAAAAAAAAAAAAACAAAGTCATGC 159
                        *   * * *      **                *  ** *   *** *       *   

consensus_14156#1      AGAGTC-GCAACTAATAAAAACTGAC--ACAAAGGGAAGC-GCTATTGC----------- 853
consensus_14156#2      AGAGTCAGCAACTATAAGAAGCTGACCAGAAAGGAGAAGCAGCTAATGCCGCACCGTCTT 522
consensus_14156#0      AGAGTCAGCAACTATAAGAAGCTGACCAGAAAGGAGAAGCAGCTAATGCCGCACCGTCTT 892
consensus_14156#3      AAAAAAAAAAAAAAAAAAAA---------------------------------------- 367
consensus_14156#4      CGTTACGT---------------------------------------------------- 167
                                                                                   

consensus_14156#1      ------------------------------------------------------------
consensus_14156#2      ATCGAGGTTAGCC----------------------------------------------- 535
consensus_14156#0      ATCGAGGTTAGCCCGAGGTGGGCTCGCAAGAGGAAAGAGGAGGCTGGTGCTGCTGCGTAG 952
consensus_14156#3      ------------------------------------------------------------
consensus_14156#4      ------------------------------------------------------------
                                                                                   

consensus_14156#1      ------------------------------------------------------------
consensus_14156#2      ------------------------------------------------------------
consensus_14156#0      CATGGCTTCCCATTTGCAGGATGTCTGCCTTCATTGGCCTTGAAGCGGTGAGTAGCCGCA 1012
consensus_14156#3      ------------------------------------------------------------
consensus_14156#4      ------------------------------------------------------------
                                                                                   

consensus_14156#1      ------------------------------------------------------------
consensus_14156#2      ------------------------------------------------------------
consensus_14156#0      TATGCTGAAATTTACCCAAGAACAATTGTAGCTCTCTCAAGAATGAATTCAAAGGTCTCA 1072
consensus_14156#3      ------------------------------------------------------------
consensus_14156#4      ------------------------------------------------------------
                                                                                   

consensus_14156#1      ------------------------------------------------------------
consensus_14156#2      ------------------------------------------------------------
consensus_14156#0      TTTGTCAGGCCTGTCTTTGTTCTGTTTGTTTCATCTGTATGAAATTTGTCTCATGAAGCA 1132
consensus_14156#3      ------------------------------------------------------------
consensus_14156#4      ------------------------------------------------------------
                                                                                   

consensus_14156#1      ------------------------------------------------------------
consensus_14156#2      ------------------------------------------------------------
consensus_14156#0      TAGGAAACTGTGGCATTGCCCACGATTCTACTCAGAATGAATAATGTCACCTCTGATATT 1192
consensus_14156#3      ------------------------------------------------------------
consensus_14156#4      ------------------------------------------------------------
                                                                                   

consensus_14156#1      ------------------------------------------------------
consensus_14156#2      ------------------------------------------------------
consensus_14156#0      TTGTTCGGCCTGCCTATTTTTATAGTTGTCTTCGCTGAAGATCCGTATTCAAAG 1246
consensus_14156#3      ------------------------------------------------------
consensus_14156#4      ------------------------------------------------------