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Oryza sativa
cluster # 14165 cluster # 14165       Sequences # 15       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_14165#0 length = 1406 sequences # 12  
consensus_14165#1 length = 638 sequences # 3  

consensusID : consensus_14165#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 12
consensus length = 1406
fasta sequence
                              [ACGCGCCTCGGTTTTATCCGCGTCCCTAGCTTAGAGAGAGAGAGAGAGAGAAAGAGAGAGAGAAGGGCGTTTGACCTGTGACCCCGGCGGCGGCGGCGGCGACGACGAGCGCGCCATGGCAGGTTCACCACCAAAGCCGTGGGAACGTGCTGGGGCTGAGGGAACTTCTGGCCCAGCACCTTTTAAGCCCCCATCTGGTGGCACCACTAGCGATGTAGTTGAAGCTTCTGGTACAGCTAAACCCGGAGAAACCGTCACCGCGACAGAGAGGAACCTCTCTGCCAATGTAAATAACCCTGTCTCGAGGCCTATGCCACAACGTCCGTGGCAGCAGACATCTGGCTAT-GGAAATACTTATGGAGGTTATGGATCCAAT-ATGTACAGTTCGTACGG-TGG-ATTT-GGCAATACCTATGGTAGTGGTGGACTCTAC-GGAAATAGCATGTATTCTAGTTATGGTGGAGGTTATGGTGGTAGCCTTTACGGAGGTTCTGGGATGTATGGTGGAGGCATG-TATAACAGTGGGTTGGGAGGCTCTTATGGTGGTTACGGCAT-GGGTGGCATGGGTGGCATGGGTGGTATGGGCGGTA-TGGGCATGGGCCCTTACGGTAACCAGGATCCGAATTCATTTGGCCCTCCTGCACCA-CCACCAAGTGTCTGGGTGTCCTTCCTACGAGTGATGCATGGTGTTGTCAATTTC-TTTGGGCGAGTTGCATTCCTTGTTGAGCAGAACACACAAGCATTCTATTTGTTTATCACAGCTATGTTGCAGCTCTTTGATCGGTCTGGGATGCTTTATGGCGAACTTGCCAGATTTGTCTTGCGCATGTTAGGAATCCGAACAAAGTCAAAGAAGGGCAAGGTTCAGGGCCCAGATACCCCAGCTTTCGAGGGACCTGCGCAGCAGTTCATTGAGGCACCAAAAGGGAACAACTCATGGGACAACGTTTGGGGAAACTGAGACGCCTTCTATATAATGCAAAATTTAAGTTGAACATACAGTTTACAAAGGAATTAT-CATGGCATGAGAGGTTGCATGTCAG-CAGTGAATCGAAACGAAGAGTACTGTTGTTAAGGTGAATTACCTGCTGGAATCGGGTTG-ACAGATAGATACTCTACTTTCTGAATTTCACGCCGATCTGTGATATATCCGAGT-CCTAGTGGACAGGT-CCAAGATGTTGTGGGCAGGTACAGTTTTTG-CCCAGATGATGCAATGGTATTTAAAGTAAGTATGTTGTATCTTGTGGGTAATCAATACTGTACCTGGAAGAGTTGGGCAAAATGTATTAATGTATCGTTTTCCTTGTTTTTCATCATAACATATGGAGTTGATTTTGACTGAAGTTTGCCTCGGACGTGCTGGTGGAGTGGTGGTACTTCATCAGGACTGTCATGCAAATGCTTTGGTT]

[+] EMBL CF276414             [ACGCGCCTCGGTTTTATCCGCGTCCCTAGCTTAGAGAGAGAGAGAGAGAGAAAGAGAGAGAGAAGGGCGTTTGACCTGTGACCCCGGCGGCGGCGGCGGCGACGACGAGCGCGCCATGGCAGGTTCACCACCAAAGCCGTGGGAACGTGCTGGGGCTGAGGGAACTTCTGGCCCAGCACCCTTTAAGCCCCCATCTGGTGGCACCACTAGCGATGTAGTTGAAGCTTCTGGTACAGCTAAACCCGGAGAAACCGTCACCGCGACAGAGAGGAACCTCTCTGCCAATGTAAATAACCCTGTCTCGAGGCCTATGCCACAACGTCCGTGGCAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL C28503               [   CGCCTCGGTTTTATCCGCGTCCCTAGCTTAGAGAGAGAGAGAGAGAGAAAGAGAGAGAGAAGGGCGTTTGACCTGTGACCCCGGCGGCGGCGGCGGCGACGACGAGCGCGCCATGGCAGGTTCACCACCAAAGCCGTGGGAACGTGCTGGGGCTGAGGGAACTTCTGGCCCAGCACCTTTTAAGCCCCCATCTGGTGGCACCACTAGCGATGTAGTTGAAGCTTCTGGTACAGCTAAACCCGGAGAAACCGTCACCGCGACAGAGAGGAACCTCTCTGCCAATGTAAATAACCCTGTTTCGAGGCCTATGCCACAACGTCCGTGGCAa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL D85554               [   CGCCTCGGTTTTATCCGCGTCCCTAGCTTAGAGAGAGAGAGAGAGAGAAAGAGAGAGAGAAGGGCGTTTGACCTGTGACCCCGGCGGCGGCGGCGGCGACGACGAGCGCGCCATGGCAGGTTCACCACCAAAGCCGTGGGAACGTGCTGGGGCTGAGGGAACTTCTGGCCCAGCACCTTTTAAGCCCCCATCTGGTGGCACCACTAGCGATGTAGTTGAAGCTTCTGGTACAGCTAAACCCGGAGAAACCGTCACCGCGACAGAGAGGAACCTCTCTGCCAATGTAAATAACCCTGTTTCGAGGCCTATGCCACAACGTCCGTGGCAa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AU065240             [   CGCCTCGGTTTTATCCGCGTCCCTAGCTTAGAGAGAGAGAGAGAGAGAAAGAGAGAGAGAAGGGCGTTTGACCTGTGACCCCGGCGGCGGCGGCGGCGACGACGAGCGCGCCATGGCAGGTTCACCACCAAAGCCGTGGGAACGTGCTGGGGCTGAGGGAACTTCTGGCCCAGCACCTTTTAAGCCCCCATCTGGTGGCACCACTAGCGATGTAGTTGAAGCTTCTGGTACAGCTAAACCCGGAGAAACCGTCACCGCGACAGAGAGGAACCTCTCTGCCAATGTAAATAACCCTGTCTCGAGGCCTATGCCACAACGTCCGTGGCAGCAGACATCTGGCTATGGGAAATACTTATGGAGGTTATGGATCCAATNATGTACAGTTCGTACGG TGGAATTTGGGCAATACCTATGGTAGTGGTGGACTCTACGGGAAATAGCATGTATTCTAGTTATGGTGGAGGTTATGGTGGTAGCCTTTACGGANGTTCTGGGATGTATGGTGGAGGCATGTTATAACAGTGGGTTGGGAGGCTCTTATGGTGGTTANGGCATGGGGTGGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL C72590               [           TTTTATCCGCGTCCCTAGCTTAGAGAGAGAGAGAGAGAGAAAGAGAGAGAGAAGGGCGTTTGACCTGTGACCCCGGCGGCGGCGGCGGCGACGACGAGCGCGCCATGGCAGGTTCACCACCAAAGCCGTGGGAACGTGCTGGGGCTGAGGGAACTTCTGGCCCAGCACCTTTTAAGCCCCCATCTGGTGGCACCACTAGCGATGTAGTTGAAGCTTCTGGTACAGCTAAACCCGGAGAAACCGTCACCGCGACAGAGAGGAACCTCTCTGCCAATGTAAATAACCCTGTCTCGAGGCCTATGCCACAACGTCCGTGGCAGCAGACATCTNGCTAT GGAAATACTTATGGAGGTTATGGATCCAAT ATGTACAGTTCGTACGGTTGG ATTT TGCAATACCTATGGTAGTGGTTGACTTTAC GGAAATAGCATGTNTTt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL OSS10658A            [                                                          AGAGAAGGGCGTTTGACCTGTGACCCCGGCGGCGGCGGCGGCGACGACGAGCGCGCCATGNCAGGTTCACCACCAAAGCCGTGGGAACGTGCTGGGGCTGAGGGAACTTNTGGCCCAGCACCTTTTAAGCCCCCATCTGGTGGCACCACTAGCGATGTAGTTGAAGCTTCTGGTACAGCTAAACCCGGAGAAACCGTCACCGCGACAGANAGGAACCTCTCTGCCAATNTAAATAACCCTGTNTCGAGGCCTATNCCACAACGTCCGTGGCAGCAGACATCTGGNTAT GGAAATACTTATGGAGGTTATGGNTCCAAT ATGTACAGTTCGTACGG TGG ATTT GGCAATAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL OSS14424A            [                                                                                                                                                                                                                                                                                                                                                                                 GATCCAAT ATGTACAGTTCGTACGG TGG ATTT GGCAATACCTATGGTAGTGGTGGACTCTAC GGAAATAGCATGTATTCTAGTTATGGTGGAGGTTATGGTGGTAGCCTTTACGGAGGTTCTGGGATGTATGGTGGAGGCATG TATAACAGTGGGTTGGGAGGCTCTTATGGTGGTTACGGCAT GGGTGGCATGGGTNGCATGGGTGGTATGGGCGGTATTGGGCATNGGCCCTTACGGTAACCAGGNTCCGAATTCATTTGGCCCTCCTGCAACA NCACCAAGTGTCTTGGTGTCCTTCCTACGAGTTATGCATGGTGTTGTCAATTTCTTTTGGGCGAGTTc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AK065458             [                                                                                                                                                                                                                                                                                                                                                                                 GATCCAAT ATGTACAGTTCGTACGG TGG ATTT GGCAATACCTATGGTAGTGGTGGACTCTAC GGAAATAGCATGTATTCTAGTTATGGTGGAGGTTATGGTGGTAGCCTTTACGGAGGTTCTGGGATGTATGGTGGAGGCATG TATAACAGTGGGTTGGGAGGCTCTTATGGTGGTTACGGCAT GGGTGGCATGGGTGGCATGGGTGGTATGGGCGGTA TGGGCATGGGCCCTTACGGTAACCAGGATCCGAATTCATTTGGCCCTCCTGCACCA CCACCAAGTGTCTGGGTGTCCTTCCTACGAGTGATGCATGGTGTTGTCAATTTC TTTGGGCGAGTTGCATTCCTTGTTGAGCAGAACACACAAGCATTCTATTTGTTTATCACAGCTATGTTGCAGCTCTTTGATCGGTCTGGGATGCTTTATGGCGAACTTGCCAGATTTGTCTTGCGCATGTTAGGAATCCGAACAAAGTCAAAGAAGGGCAAGGTTCAGGGCCCAGATACCCCAGCTTTCGAGGGACCTGCGCAGCAGTTCATTGAGGCACCAAAAGGGAACAACTCATGGGACAACGTTTGGGGAAACTGAGACGCCTTCTATATAATGCAAAATTTAAGTTGAACATACAGTTTACAAAGGAATTAT CATGGCATGAGAGGTTGCATGTCAG CAGTGAATCGAAACGAAGAGTACTGTTGTTAAGGTGAATTACCTGCTGGAATCGGGTTG ACAGATAGATACTCTACTTTCTGAATTTCACGCCGATCTGTGATATATCCGAGT CCTAGTGGACAGGT CCAAGATGTTGTGGGCAGGTACAGTTTTTG CCCAGATGATGCAATGGTATTTAAAGTAAGTATGTTGTATCTTGTGGGTAATCAATACTGTACCTGGAAGAGTTGGGCAAAATGTATTAATGTATCGTTTTCCTTGTTTTTCATCATAACATATGGAGTTGATTTTGACTGAAGTTTGCCTCGGACGTGCTGGTGGAGTGGTGGTACTTCATCAGGACTGTCATGCAAATGCTTTGGTT]
[+] EMBL AA752358             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ggcacgaGTGGAGGCATG TATAACAGTGGGTTGGGAGGCTCTTATGGTGGTTACGGCAT GGGTGGCATGGGTGGCATGGGTGGTATGGGCGGTA TGGGCATGGGCCCTTACGGTAACCAGGATCCGAATTCATTTGGCCCTCCTGCACCA CCACCAAGTGTCTGGGTGTCCTTCCTACAAATGATGCATGGTGTTGTCAATTTC TTTGGGCGAGTTGCATTCCTTGTTGAACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AU092991             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 nTCNTGNACCACCCACCAAGTGTCTGGGTGTCCTTCCTACGAGTGATGCATGGTGTTGTCAATTTC TTTGGGCGAGTTGCATTCCTTGTTGAGCAGAACACACAAGCATTCTATTTGTTTATCACAGCTATGTTGCAGCTCTTTGATCGGTCTGGGATGCTTTATGGCGAACTTGCCAGATTTGTCTTGCGCATGTTAGGAATCCGAACAAAGTCAAAGAAGGGCAAGGTTCAGGGCCCAGATACCCCAGCTTTCGAGGGACCTGCGCAGCAGTTCATTGAGGCACCAAAAGGGAACAACTCATGGGACAACGTTTGGGGAAACTGAGACGCCTTCTATATAATGCAAAATTTAAGTTGAACATACAGTTTACAAAGGAATTAT CATGGCATGAGAGGTTGCATGTCAG CAGTGAATCGAAACGAAGAGTACTGTTGTTAAGGTGAATTACCTGCTGGAATCGGGTTG ACAGATAGATACTCTACTTTCTGAATTTCACGCCGATCTGTGATATATCCGAGT CCTAGTGGACAGGT CCAAGATGTTGTGGGCAGGTACAGTTTTTG CCCAGATGATGCAATGGTATTTAAAGTAAGTATGTTGTATCTTGTGGGTAATCAATACTGTACCTGGAAGAGTTGGGCAAAATGTATTAATGTATCGTTTTCCTTGTTTTTCATCAAAAaaa                                                                                       ]
[-] EMBL BI306112             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TTCAGGGCCCAGATACCCCAGCTTTCGAGGGACCTGCGCAGCAGTTCATTGAGGCACCAAAAGGGAACAACTCATGGGACAACGTTTGGGGAAACTGAGACGCCTTCTATATAATGCAAAATTTAAGTTGAACATACAGTTTACAAAGGAATTAT CATGGCATGAGAGGTTGCATGTCAG CAGTGAATCGAAACGAAGAGTACTGTTGTTAAGGTGAATTACCTGCTGGAATCGGGTTG ACAGATAGATACTCTACTTTCTGAATTTCACGCCGATCTGTGATATATCCGAGT CCTAGTGGACAGGT CCAAGATGTTGTGGGCAGGTACAGTTTTTG CCCAGATGATGCAATGGTATTTAAAGTAAGTATGTTGTATCTTGTGGGTAATCAATACTGTACCTGGAAGAGTTGGGCAAAATGTATTAATGTATCGTTTTCCTTGTT                                                                                                     ]
[+] EMBL AU032508             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       tATGC AAATTT AGTTGAACATACAGTTTACAANGG ATTATCCATGGCATGAGAGGTTGCATGTCAGCCAGTGAATCGAAACGAAGAGTACTGTTGTTAAGGTGAATTNCCTGCTGGAATCGGGTTGNACAGATAGATACTCTACTTTCTGAATTTCACGCCGATCTGTGATATATCCGAGTCCCTANTGGACAGGTCCCAAGATGTTGTGGGCAGGTACAGTTTTTGCCCCAGATGATGCCATGGTATTTAAAGTAAGTATGTTGTATCTTGTGGGTAATCAATACTGTACCTGGAAGAGTTGGGCAAAATGTATTAATGTATCGTTTTCCTTGTTTTTCATCATAACATATGGAGTTGATTTTGACTGAAGTTTGCCTCGGACGTGCTGGTGGAGTGGTGGTACTTCATCAGGACTGTCATGCAAATGCTT     ]


>consensus_14165#0 ACGCGCCTCGGTTTTATCCGCGTCCCTAGCTTAGAGAGAGAGAGAGAGAGAAAGAGAGAG AGAAGGGCGTTTGACCTGTGACCCCGGCGGCGGCGGCGGCGACGACGAGCGCGCCATGGC AGGTTCACCACCAAAGCCGTGGGAACGTGCTGGGGCTGAGGGAACTTCTGGCCCAGCACC TTTTAAGCCCCCATCTGGTGGCACCACTAGCGATGTAGTTGAAGCTTCTGGTACAGCTAA ACCCGGAGAAACCGTCACCGCGACAGAGAGGAACCTCTCTGCCAATGTAAATAACCCTGT CTCGAGGCCTATGCCACAACGTCCGTGGCAGCAGACATCTGGCTATGGAAATACTTATGG AGGTTATGGATCCAATATGTACAGTTCGTACGGTGGATTTGGCAATACCTATGGTAGTGG TGGACTCTACGGAAATAGCATGTATTCTAGTTATGGTGGAGGTTATGGTGGTAGCCTTTA CGGAGGTTCTGGGATGTATGGTGGAGGCATGTATAACAGTGGGTTGGGAGGCTCTTATGG TGGTTACGGCATGGGTGGCATGGGTGGCATGGGTGGTATGGGCGGTATGGGCATGGGCCC TTACGGTAACCAGGATCCGAATTCATTTGGCCCTCCTGCACCACCACCAAGTGTCTGGGT GTCCTTCCTACGAGTGATGCATGGTGTTGTCAATTTCTTTGGGCGAGTTGCATTCCTTGT TGAGCAGAACACACAAGCATTCTATTTGTTTATCACAGCTATGTTGCAGCTCTTTGATCG GTCTGGGATGCTTTATGGCGAACTTGCCAGATTTGTCTTGCGCATGTTAGGAATCCGAAC AAAGTCAAAGAAGGGCAAGGTTCAGGGCCCAGATACCCCAGCTTTCGAGGGACCTGCGCA GCAGTTCATTGAGGCACCAAAAGGGAACAACTCATGGGACAACGTTTGGGGAAACTGAGA CGCCTTCTATATAATGCAAAATTTAAGTTGAACATACAGTTTACAAAGGAATTATCATGG CATGAGAGGTTGCATGTCAGCAGTGAATCGAAACGAAGAGTACTGTTGTTAAGGTGAATT ACCTGCTGGAATCGGGTTGACAGATAGATACTCTACTTTCTGAATTTCACGCCGATCTGT GATATATCCGAGTCCTAGTGGACAGGTCCAAGATGTTGTGGGCAGGTACAGTTTTTGCCC AGATGATGCAATGGTATTTAAAGTAAGTATGTTGTATCTTGTGGGTAATCAATACTGTAC CTGGAAGAGTTGGGCAAAATGTATTAATGTATCGTTTTCCTTGTTTTTCATCATAACATA TGGAGTTGATTTTGACTGAAGTTTGCCTCGGACGTGCTGGTGGAGTGGTGGTACTTCATC AGGACTGTCATGCAAATGCTTTGGTT



consensusID : consensus_14165#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 638
fasta sequence
                              [TTGAGCAGAACACACAGCATTCTATTTTGTTTATCACAGCTATGTTGCAGCTCTTTGANCGGTCTGGGATGCTTTATGGCGAACTTGCNCAGATTTGTCTTGCGCATGTTAGGAATCCGAACAAAGTCAAAGAAGGGCAAGGTTCAGGGCCCAGATACCCCAGCTTTCGAGGGACCTGCGCAGCAGTTCATTGAGGCACCAAAAGGGNACAACTCATGGGACAACGTTTGGGGAAACTGAGACGCCTTCTATATAATGCAAAATTTAAGTTGAACATACAGTTTACAAAGGAATTATCATGGCATGAGAGGTTGCATGTCAGCAGTGAATCGAAACGAAGAGTACTGTTGTTAAGGTGAATTNCCTGCTGGAATCGGGTTGACAGATAGATACTCTACTTTCTGAATTTCACGCCGATCTGTGATATATCCGAGTCCTAGTGGACAGGTCCAAGATGTTGTGGGCAGGTACAGTTTTTGCCCAGATGATGCAATGGTATTTAAAGTAAGTATGTTGTATCTTGTGGGTAATCAATACTGTACCTGGAAGAGTTGGGCAAAATGTATTAATGTATCGTTTTCCTTGTTTTTCATCATAACATATGGAGTTGATTTTGACTGAAAAAAAAAAAAAAAAAA]

[+] EMBL AU094022             [TTGAGCAGAACACACAGCATTCTATTTTGTTTATCACAGCTATGTTGCAGCTCTTTGANCGGTCTGGGATGCTTTATGGCGAACTTGCNCAGATTTGTCTTGCGCATGTTAGGAATCCGAACAAAGTCAAAGAAGGGCAAGGTTCAGGGCCCAGATACCCCAGCTTTCGAGGGACCTGCGCAGCAGTTCATTGAGGCACCAAAAGGGNACAACTCATGGGACAACGTTTGGGGAAACTGAGACGCCTTCTATATAATGCAAAATTTAAGTTGAACATACAGTTTACAAAGGAATTATCATGGCATGAGAGGTTGCATGTCAGCAGTGAATCGAAACGAAGAGTACTGTTGTTAAGGTGAATTNCCTGCTGGAATCGGGTTGACAGATAGATACTCTACTTTCTGAATTTCACGCCGATCTGTGATATATCCGAGTCCTAGTGGACAGGTCCAAGATGTTGTGGGCAGGTACAGTTTTTGCCCAGATGATGCAATGGTATTTAAAGTAAGTATGTTGTATCTTGTGGGTAATCAATACTGTACCTGGAAGAGTTGGGCAAAATGTATTAATGTATCGTTTTCCTTGTTTTTCATCATAACATATGGAGTTGATTTTGACTGAAAAAAAAAAAAAAAAAA]
[+] EMBL AU165946             [                                                                                                                                                                                          TTCATTGAGGCACCAANAGGGAACNACTCATGGGACAACGTTTGGGGAAACTGAGACGCCTTCTATATAATGCAAAATTTAAGTTGAACATACAGTTTACAAAGGAATTATCATGGCATGAGAGGTTGCATGTCAGCAGTGAATCGAAACGAAGAGTACTGTTGTTAAGGTGAATTACCTGCTGGAATCGGGTTGACAGATAGATACTCTACTTTCTGAATTTCACGCCGATCTGTGATATATCCGAGTCCTAGTGGACAGGTCCAAGATGTTGTGGGCAGGTACAGTTTTTGCCCAGATGATGCAATGGTATTTAAAGTAAGTATGTTGTATCTTGTGGGTAATCAATACTGTACCTGGAAGAGTTGGGCAAAATGTATTAATGTATCGTTTTCCTTGTTTTTCATCATAACATATGGAGTTGATTTTGACTGAAAAAAAAAAAAAAAA  ]
[-] EMBL CF276415             [                                                                                                                                                                                                                                                                                                                                                                                                                                       ATATATCCGAGTCCTAGTGGACAGGTCCCAGATGTTGTGGGCAGGCACAGTTTTTGCCCAGATTATGCAATGGTATTTAAAGTAAGTATGTTGTATCTTGTGGGTAATCAATACTGTACCTGGAAGAGTTGGGCAAAATGTATTAATGTATCGTTTTCCTTGTTTTTCATCATAACATATGGAGTTGATTTTGAC GAAAAAAAAA         ]


>consensus_14165#1 TTGAGCAGAACACACAGCATTCTATTTTGTTTATCACAGCTATGTTGCAGCTCTTTGANC GGTCTGGGATGCTTTATGGCGAACTTGCNCAGATTTGTCTTGCGCATGTTAGGAATCCGA ACAAAGTCAAAGAAGGGCAAGGTTCAGGGCCCAGATACCCCAGCTTTCGAGGGACCTGCG CAGCAGTTCATTGAGGCACCAAAAGGGNACAACTCATGGGACAACGTTTGGGGAAACTGA GACGCCTTCTATATAATGCAAAATTTAAGTTGAACATACAGTTTACAAAGGAATTATCAT GGCATGAGAGGTTGCATGTCAGCAGTGAATCGAAACGAAGAGTACTGTTGTTAAGGTGAA TTNCCTGCTGGAATCGGGTTGACAGATAGATACTCTACTTTCTGAATTTCACGCCGATCT GTGATATATCCGAGTCCTAGTGGACAGGTCCAAGATGTTGTGGGCAGGTACAGTTTTTGC CCAGATGATGCAATGGTATTTAAAGTAAGTATGTTGTATCTTGTGGGTAATCAATACTGT ACCTGGAAGAGTTGGGCAAAATGTATTAATGTATCGTTTTCCTTGTTTTTCATCATAACA TATGGAGTTGATTTTGACTGAAAAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14165#0      ACGCGCCTCGGTTTTATCCGCGTCCCTAGCTTAGAGAGAGAGAGAGAGAGAAAGAGAGAG 60
consensus_14165#1      ------------------------------------------------------------
                                                                                   

consensus_14165#0      AGAAGGGCGTTTGACCTGTGACCCCGGCGGCGGCGGCGGCGACGACGAGCGCGCCATGGC 120
consensus_14165#1      ------------------------------------------------------------
                                                                                   

consensus_14165#0      AGGTTCACCACCAAAGCCGTGGGAACGTGCTGGGGCTGAGGGAACTTCTGGCCCAGCACC 180
consensus_14165#1      ------------------------------------------------------------
                                                                                   

consensus_14165#0      TTTTAAGCCCCCATCTGGTGGCACCACTAGCGATGTAGTTGAAGCTTCTGGTACAGCTAA 240
consensus_14165#1      ------------------------------------------------------------
                                                                                   

consensus_14165#0      ACCCGGAGAAACCGTCACCGCGACAGAGAGGAACCTCTCTGCCAATGTAAATAACCCTGT 300
consensus_14165#1      ------------------------------------------------------------
                                                                                   

consensus_14165#0      CTCGAGGCCTATGCCACAACGTCCGTGGCAGCAGACATCTGGCTATGGAAATACTTATGG 360
consensus_14165#1      ------------------------------------------------------------
                                                                                   

consensus_14165#0      AGGTTATGGATCCAATATGTACAGTTCGTACGGTGGATTTGGCAATACCTATGGTAGTGG 420
consensus_14165#1      ------------------------------------------------------------
                                                                                   

consensus_14165#0      TGGACTCTACGGAAATAGCATGTATTCTAGTTATGGTGGAGGTTATGGTGGTAGCCTTTA 480
consensus_14165#1      ------------------------------------------------------------
                                                                                   

consensus_14165#0      CGGAGGTTCTGGGATGTATGGTGGAGGCATGTATAACAGTGGGTTGGGAGGCTCTTATGG 540
consensus_14165#1      ------------------------------------------------------------
                                                                                   

consensus_14165#0      TGGTTACGGCATGGGTGGCATGGGTGGCATGGGTGGTATGGGCGGTATGGGCATGGGCCC 600
consensus_14165#1      ------------------------------------------------------------
                                                                                   

consensus_14165#0      TTACGGTAACCAGGATCCGAATTCATTTGGCCCTCCTGCACCACCACCAAGTGTCTGGGT 660
consensus_14165#1      ------------------------------------------------------------
                                                                                   

consensus_14165#0      GTCCTTCCTACGAGTGATGCATGGTGTTGTCAATTTCTTTGGGCGAGTTGCATTCCTTGT 720
consensus_14165#1      -----------------------------------------------------------T 1
                                                                                  *

consensus_14165#0      TGAGCAGAACACACAAGCATTCTATTT-GTTTATCACAGCTATGTTGCAGCTCTTTGATC 779
consensus_14165#1      TGAGCAGAACACACA-GCATTCTATTTTGTTTATCACAGCTATGTTGCAGCTCTTTGANC 60
                       *************** *********** ****************************** *

consensus_14165#0      GGTCTGGGATGCTTTATGGCGAACTTGCC-AGATTTGTCTTGCGCATGTTAGGAATCCGA 838
consensus_14165#1      GGTCTGGGATGCTTTATGGCGAACTTGCNCAGATTTGTCTTGCGCATGTTAGGAATCCGA 120
                       ****************************  ******************************

consensus_14165#0      ACAAAGTCAAAGAAGGGCAAGGTTCAGGGCCCAGATACCCCAGCTTTCGAGGGACCTGCG 898
consensus_14165#1      ACAAAGTCAAAGAAGGGCAAGGTTCAGGGCCCAGATACCCCAGCTTTCGAGGGACCTGCG 180
                       ************************************************************

consensus_14165#0      CAGCAGTTCATTGAGGCACCAAAAGGGAACAACTCATGGGACAACGTTTGGGGAAACTGA 958
consensus_14165#1      CAGCAGTTCATTGAGGCACCAAAAGGGNACAACTCATGGGACAACGTTTGGGGAAACTGA 240
                       *************************** ********************************

consensus_14165#0      GACGCCTTCTATATAATGCAAAATTTAAGTTGAACATACAGTTTACAAAGGAATTATCAT 1018
consensus_14165#1      GACGCCTTCTATATAATGCAAAATTTAAGTTGAACATACAGTTTACAAAGGAATTATCAT 300
                       ************************************************************

consensus_14165#0      GGCATGAGAGGTTGCATGTCAGCAGTGAATCGAAACGAAGAGTACTGTTGTTAAGGTGAA 1078
consensus_14165#1      GGCATGAGAGGTTGCATGTCAGCAGTGAATCGAAACGAAGAGTACTGTTGTTAAGGTGAA 360
                       ************************************************************

consensus_14165#0      TTACCTGCTGGAATCGGGTTGACAGATAGATACTCTACTTTCTGAATTTCACGCCGATCT 1138
consensus_14165#1      TTNCCTGCTGGAATCGGGTTGACAGATAGATACTCTACTTTCTGAATTTCACGCCGATCT 420
                       ** *********************************************************

consensus_14165#0      GTGATATATCCGAGTCCTAGTGGACAGGTCCAAGATGTTGTGGGCAGGTACAGTTTTTGC 1198
consensus_14165#1      GTGATATATCCGAGTCCTAGTGGACAGGTCCAAGATGTTGTGGGCAGGTACAGTTTTTGC 480
                       ************************************************************

consensus_14165#0      CCAGATGATGCAATGGTATTTAAAGTAAGTATGTTGTATCTTGTGGGTAATCAATACTGT 1258
consensus_14165#1      CCAGATGATGCAATGGTATTTAAAGTAAGTATGTTGTATCTTGTGGGTAATCAATACTGT 540
                       ************************************************************

consensus_14165#0      ACCTGGAAGAGTTGGGCAAAATGTATTAATGTATCGTTTTCCTTGTTTTTCATCATAACA 1318
consensus_14165#1      ACCTGGAAGAGTTGGGCAAAATGTATTAATGTATCGTTTTCCTTGTTTTTCATCATAACA 600
                       ************************************************************

consensus_14165#0      TATGGAGTTGATTTTGACTGAAGTTTGCCTCGGACGTGCTGGTGGAGTGGTGGTACTTCA 1378
consensus_14165#1      TATGGAGTTGATTTTGACTGAAAAAAAAAAAAAAAAAA---------------------- 638
                       **********************           *                          

consensus_14165#0      TCAGGACTGTCATGCAAATGCTTTGGTT 1406
consensus_14165#1      ----------------------------
                                                   




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)