cluster # 14171

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Oryza sativa
cluster # 14171 cluster # 14171 Sequences # 15 consensus # 6

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_14171#0 length = 1488 sequences # 5
consensus_14171#1 length = 1237 sequences # 5
consensus_14171#2 length = 660 sequences # 2

consensus_14171#3 length = 588 sequences # 1
consensus_14171#4 length = 380 sequences # 1
consensus_14171#5 length = 276 sequences # 1

consensusID : consensus_14171#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1488
fasta sequence

                              [AACGAAAATATGATGTACTATATATATCCTCTCTTTATCTTCTAGGAACAAAATTGGAACAAAATTAGATGTGATACCTAACCCTTCAAAACTTGGCTTTGAGACAATGACCGACATGATCCAGCTTTATAAACGCCTCCCCTTCCACTTCACTCTTCTTCACTCCACCACAGGTTCAGCTCGCCTCCTCCCGTAGCCAACTTCCACGCAGAGATCGCCAACCACCATGCCGCCGCCGTCGCCGCACCCACCTCACCGCAACGGCAACCACGTCCCGGCGCCCTCCGGCGAGTCGTTCGCCAAGTTCTTCGAGTGCTGGATCTCCGAGCAGTCCCGCGACCTCGCCGCGCTCCGCTCCGCCGCGTCGGCGGCGACGAACCCCGCGGCGCCGCCCGACGACGCCGAGCTCCACCGCCTCGTCAACCGGGTCCTCGGCCACTACGAGCACTACTACCGGACCAAGTCCGCCGCCGCCTCCACCGACGTGCTCCGCATGTTCTCCCCGTCGTGGACCTCCACCACCGAGAACCTCTACCTCTGGTGCGGCGGATGGCGCCCCACTGCCGCGCTCCACCTGCTCTACTCCAAGTCCGGCGCGCAGCTCGAGACCCAGCTCCCGGTGTTCCTCGCCGGCGGCGGCCTCGGGGCGGGCGACCTCGGCGACCTCTCCGCCGAGCAGCTCCAGGCCGCCGACCAGCTTCAGCGGATAACCGTCAGCAAGGAACGGGAGATCGAGAACGCCGCCGCGAGTGCACAGGTGAGTGATGGTTAATTTGTTCTTTCATCAGTGAGGTGAGCTCGATCAGCATCCGGATGCAAACGTGAACAATGCAGGAGTCGTTGGCGACGGTGAAGATGGTGGAGCTAGCCGGAGGCGGCGGGATGGACGCGGAGGGGATGGAGATGGAGATGAGGAGCAAGGCGGACGGGATGAGGCGCGTGCTGGAGATGGCAGAC-GGGCTGAGGCTGGAGACGATGA-GGGAGGTGGTGGCGCTGCTCCGCCCGTCGCAGGCCGTGCACTTCCTCATCGCCGCCGCCGAGCTCCACCTCGCCGTGCACGAG-TTCGGCAGGCGCAAGGACGGCGACGGCGCCGCGTCGCCGCCGCCGGCGTGACGCGTGCGCGCTCGTGTCGTGTCGTTGCCGTTCCAAGTGCGCGGCGTGGTCTCCGATGCGTAGGCTCGTCGTCTAGCTCTGGTCAACTCAAGTCGTCGCGATAAGCTTTGACCGATATTTATTTATGCAGTACTCGTACACTAGTATTTCTCTCTCTCTCTCTTTTTTTTCTGCGATGAAGCCGATGATACCTGTAGGGTTTTTTTTTTCTTTCTTTTTTGCGTTTGCATGTGATGGAATTTTACTACCGTACTTTGGAGCAGCTGTTTCTATATAGACAGTGAGCTAACCTGCGTGATATTTCTAATCAATTCGGGAAGGGAAGGATAAAATTGTTTTTTGTTGCTATGTGTTCGAATCTTAATGTTAATCACA]

[+] EMBL AU068203             [AACGAAAATATGATGTACTATATATATCCTCTCTTTATCTTCTAGGAACAAAATTGGAACAAAATTAGATGTGATACCTAACCCTTCAAAACTTGGCTTTGAGACAATGACCGACATGATCCAGCTTTATAAACGCCTCCCCTTCCACTTCACTCTTCTTCACTCCACCACAGGTTCAGCTCGCCTCCTCCCGTAGCCAACTTCCACGCAGAGATCGCCAACCACCATGCCGCCGCCGTCGCCGCACCCACCTCACCGCAACGGCAACCACGTCCCGGCGCCCTCCGGCGAGTCGTTCGCCAAGTTCTTCGAGTGCTGGATCTCCGAGCAGTCCCGCGACCTCGCCGCGCTCCGCTCCGCCGCGTCGGC GCGACGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL AK070330             [                                                                                                                                                                       CCACAGGTTCAGCTCGCCTCCTCCCGTAGCCAACTTCCACGCAGAGATCGCCAACCACCATGCCGCCGCCGTCGCCGCACCCACCTCACCGCAACGGCAACCACGTCCCGGCGCCCTCCGGCGAGTCGTTCGCCAAGTTCTTCGAGTGCTGGATCTCCGAGCAGTCCCGCGACCTCGCCGCGCTCCGCTCCGCCGCGTCGGCGGCGACGAACCCCGCGGCGCCGCCCGACGACGCCGAGCTCCACCGCCTCGTCAACCGGGTCCTCGGCCACTACGAGCACTACTACCGGACCAAGTCCGCCGCCGCCTCCACCGACGTGCTCCGCATGTTCTCCCCGTCGTGGACCTCCACCACCGAGAACCTCTACCTCTGGTGCGGCGGATGGCGCCCCACTGCCGCGCTCCACCTGCTCTACTCCAAGTCCGGCGCGCAGCTCGAGACCCAGCTCCCGGTGTTCCTCGCCGGCGGCGGCCTCGGGGCGGGCGACCTCGGCGACCTCTCCGCCGAGCAGCTCCAGGCCGCCGACCAGCTTCAGCGGATAACCGTCAGCAAGGAACGGGAGATCGAGAACGCCGCCGCGAGTGCACAGGTGAGTGATGGTTAATTTGTTCTTTCATCAGTGAGGTGAGCTCGATCAGCATCCGGATGCAAACGTGAACAATGCAGGAGTCGTTGGCGACGGTGAAGATGGTGGAGCTAGCCGGAGGCGGCGGGATGGACGCGGAGGGGATGGAGATGGAGATGAGGAGCAAGGCGGACGGGATGAGGCGCGTGCTGGAGATGGCAGAC GGGCTGAGGCTGGAGACGATGA GGGAGGTGGTGGCGCTGCTCCGCCCGTCGCAGGCCGTGCACTTCCTCATCGCCGCCGCCGAGCTCCACCTCGCCGTGCACGAG TTCGGCAGGCGCAAGGACGGCGACGGCGCCGCGTCGCCGCCGCCGGCGTGACGCGTGCGCGCTCGTGTCGTGTCGTTGCCGTTCCAAGTGCGCGGCGTGGTCTCCGATGCGTAGGCTCGTCGTCTAGCTCTGGTCAACTCAAGTCGTCGCGATAAGCTTTGACCGATATTTATTTATGCAGTACTCGTACACTAGTATTTCTCTCTCTCTCTCTTTTTTTTCTGCGATGAAGCCGATGATACCTGTAGGGTTTTTTTTTTCTTTCTTTTTTGCGTTTGCATGTGATGGAATTTTACTACGGTACTTTGGAGCAGCTGTTTCTATATAGACAGTGAGCTAACCTGCGTGAT                                                                            ]
[+] EMBL AK106273             [                                                                                                                                                                           AGGTTCAGCTCGCCTCCTCCCGTAGCCAACTTCCACGCAGAGATCGCCAACCACCATGCCGCCGCCGTCGCCGCACCCACCTCACCGCAACGGCAACCACGTCCCGGCGCCCTCCGGCGAGTCGTTCGCCAAGTTCTTCGAGTGCTGGATCTCCGAGCAGTCCCGCGACCTCGCCGCGCTCCGCTCCGCCGCGTCGGCGGCGACGAACCCCGCGGCGCCGCCCGACGACGCCGAGCTCCACCGCCTCGTCAACCGGGTCCTCGGCCACTACGAGCACTACTACCGGACCAAGTCCGCCGCCGCCTCCACCGACGTGCTCCGCATGTTCTCCCCGTCGTGGACCTCCACCACCGAGAACCTCTACCTCTGGTGCAGCGGATGGCGCCCCACTGCCGCGCTCCACCTGCTCTACTCCAAGTCCGGCGCGCAGCTCGAGACCCAGCTCCCGGTGTTCCTCGCCGGCGGCGGCCTCGGGGCGGGCGACCTCGGCGACCTCTCCGCCGAGCAGCTCCAGGCCGCCGACCAGCTTCAGCGGATAACCGTCAGCAAGGAACGGGAGATCGAGAACGCCGCCGCGAGTGCACAGGTGAGTGATGGTTAATTTGTTCTTTCATCAGTGAGGTGAGCTCGATCAGCATCCGGATGCAAACGTGAACAATGCAGGAGTCGTTGGCGACGGTGAAGATGGTGGAGCTAGCCGGAGGCGGCGGGATGGACGCGGAGGGGATGGAGATGGAGATGAGGAGCAAGGCGGACGGGATGAGGCGCGTGCTGGAGATGGCAGAC GGGCTGAGGCTGGAGACGATGA GGGAGGTGGTGGCGCTGCTCCGCCCGTCGCAGGCCGTGCACTTCCTCATCGCCGCCGCCGAGCTCCACCTCGCCGTGCACGAG TTCGGCAGGCGCAAGGACGGCGACGGCGCCGCGTCGCCGCCGCCGGCGTGACGCGTGCGCGCTCGTGTCGTGTCGTTGCCGTTCCAAGTGCGCGGCGTGGTCTCCGATGCGTAGGCTCGTCGTCTAGCTCTGGTCAACTCAAGTCGTCGCGATAAGCTTTGACCGATATTTATTTATGCAGTACTCGTACACTAGTATTTCTCTCTCTCTCTCTTTTTTTTCTGCGATGAAGCCGATGATACCTGTAGGGTTTTTTTTTTCTTTCTTTTTTGCGTTTGCATGTGATGGAATTTTACTACCGTACTTTGGAGCAGCTGTTTCTATATAGACAGTGAGCTAACCTGCGTGATATTTCTAATCAATTCGGGAAGGGAAGGATAAAATTGTTTTTTGTTGCTATGTGTTCGAATCTTAATGTTAATCACA]
[+] EMBL CB662551             [                                                                                                                                                                                                                                                                        CAACCACGTCCCGGCGCCCTCCGGCGAGTCGTTCGCCAAGTTCTTCGAGTGCTGGATCTCCGAGCAGTCCCGCGACCTCGCCGCGCTCCGCTCCGCCGCGTCGGCGGCGACGAACCCCGCGGCGCCGCCCGACGACGCCGAGCTCCACCGCCTCGTCAACCGGGTCCTCGGCCACTACGAGCACTACTACCGGACCAAGTCCGCCGCCGCCTCCACCGACGTGCTCCGCATGTTCTCCCCGTCGTGGACCTCCACCACCGAGAACCTCTACCTCTGGTGCGGCGGATGGCGCCCCACTGCCGCGCTCCACCTGCTCTACTCCAAGTCCGGCGCGCAGCTCGAGACCCAGCTCCCGGTGTTCCTCGCCGGCGGCGGCCTCGGGGCGGGCGACCTCGGCGACCTCTCCGCCGAGCAGCTCCAGGCCGCCGACCAGCTTCAGCGGATAACCGTCAGCAAGGAACGGGAGATCGAGAACGCCGCCGCGAGTGCACAGGTGAGTGATGGTTAATTTGTTCTTTCATCAGTGAGGTGAGCTCGATCAGCATCCGGATGCAAACGTGAACAATGCAGGAGTCGTTGGCGACGGTGAAGATGGTGGAGCTAGCCGGAGGCGGCGGGATGGACGCGGAGGGGATGGAGATGGAGATGAGGAGCAAGGCGGACGGGATGAGGCGCGTGCTGGAGATGGCAGAC GGGCTGAGGCTGGAGACGATGAGGGGAGGTGGTGGCGCTGCTCCGCCCGTCGCAGGCCGTGCACTTCCTCATCGCCGCCGCCGAGCTCCACC                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL AU057825             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GGACGGGATGAGGCGCGTGCTGGAGATGGCAGACGGGGCTGAGGCTGGAGACGATGA GGGAGGTGGTGGCGCTGCTCCGCCCGTCGCAGGCCGTGCACTTCCTCATCGCCGCCGCCGAGCTCCACCTCGCCGTGCACGAGNTTCGGCAGGCGCAAGGACGGCGACGGCGCCGCGTCGCCGCCGCCGGCGTGACGCGTGCGCGCTCGTGTCGTGTCGTTGCCGTTCCAAGTGCGCGGCGTGGTCTCCGATGCGTAGGCTCGTCGTCTAGCTCTGGTCAACTCAAGTCGTCGCGATAAGCTTTGACCGATATTTATTTATGCAGTACTCGTACACTAGTATTTCTCTCTCTCTCTCTTTTTTTTCTGCGATGAAGCCGATGATACCTGTAGGGTTTTTTTTTTCTTTCTTTTTTGCGTTTGCATGTGATGGAATTTTACTACCGTACTTTGGAGCAGCTGTTTCTATATAGACAGTGAGCTAACCTGCGTGATATTTCTAATCAATTCGGGAAGGGAAGGATAAAATTGTTTTTaaaaaa                             ]




>consensus_14171#0
AACGAAAATATGATGTACTATATATATCCTCTCTTTATCTTCTAGGAACAAAATTGGAAC
AAAATTAGATGTGATACCTAACCCTTCAAAACTTGGCTTTGAGACAATGACCGACATGAT
CCAGCTTTATAAACGCCTCCCCTTCCACTTCACTCTTCTTCACTCCACCACAGGTTCAGC
TCGCCTCCTCCCGTAGCCAACTTCCACGCAGAGATCGCCAACCACCATGCCGCCGCCGTC
GCCGCACCCACCTCACCGCAACGGCAACCACGTCCCGGCGCCCTCCGGCGAGTCGTTCGC
CAAGTTCTTCGAGTGCTGGATCTCCGAGCAGTCCCGCGACCTCGCCGCGCTCCGCTCCGC
CGCGTCGGCGGCGACGAACCCCGCGGCGCCGCCCGACGACGCCGAGCTCCACCGCCTCGT
CAACCGGGTCCTCGGCCACTACGAGCACTACTACCGGACCAAGTCCGCCGCCGCCTCCAC
CGACGTGCTCCGCATGTTCTCCCCGTCGTGGACCTCCACCACCGAGAACCTCTACCTCTG
GTGCGGCGGATGGCGCCCCACTGCCGCGCTCCACCTGCTCTACTCCAAGTCCGGCGCGCA
GCTCGAGACCCAGCTCCCGGTGTTCCTCGCCGGCGGCGGCCTCGGGGCGGGCGACCTCGG
CGACCTCTCCGCCGAGCAGCTCCAGGCCGCCGACCAGCTTCAGCGGATAACCGTCAGCAA
GGAACGGGAGATCGAGAACGCCGCCGCGAGTGCACAGGTGAGTGATGGTTAATTTGTTCT
TTCATCAGTGAGGTGAGCTCGATCAGCATCCGGATGCAAACGTGAACAATGCAGGAGTCG
TTGGCGACGGTGAAGATGGTGGAGCTAGCCGGAGGCGGCGGGATGGACGCGGAGGGGATG
GAGATGGAGATGAGGAGCAAGGCGGACGGGATGAGGCGCGTGCTGGAGATGGCAGACGGG
CTGAGGCTGGAGACGATGAGGGAGGTGGTGGCGCTGCTCCGCCCGTCGCAGGCCGTGCAC
TTCCTCATCGCCGCCGCCGAGCTCCACCTCGCCGTGCACGAGTTCGGCAGGCGCAAGGAC
GGCGACGGCGCCGCGTCGCCGCCGCCGGCGTGACGCGTGCGCGCTCGTGTCGTGTCGTTG
CCGTTCCAAGTGCGCGGCGTGGTCTCCGATGCGTAGGCTCGTCGTCTAGCTCTGGTCAAC
TCAAGTCGTCGCGATAAGCTTTGACCGATATTTATTTATGCAGTACTCGTACACTAGTAT
TTCTCTCTCTCTCTCTTTTTTTTCTGCGATGAAGCCGATGATACCTGTAGGGTTTTTTTT
TTCTTTCTTTTTTGCGTTTGCATGTGATGGAATTTTACTACCGTACTTTGGAGCAGCTGT
TTCTATATAGACAGTGAGCTAACCTGCGTGATATTTCTAATCAATTCGGGAAGGGAAGGA
TAAAATTGTTTTTTGTTGCTATGTGTTCGAATCTTAATGTTAATCACA

consensusID : consensus_14171#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1237
fasta sequence

                              [CAGGTTCAGCTCGCCTCCTCCCGTAGCCAACTTCCACGCAGAGATCGCCAACCACCATGCCGCCGCCGTCGCCGCACCCACCTCACCGCAACGGCAACCACGTCCCGGCGCCCTCCGGCGAGTCGTTCGCCAAGTTCTTCGAGTGCTGGATCTCCGAGCAGTCCCGCGACCTCGCCGCGCTCCGCTCCGCCGCGTCGGCGGCGACGAACCCCGCGGCGCCGCCCGACGACGCCGAGCTCCACCGCCTCGTCAACCGGGTCCTCGGCCACTACGAGCACTACTACCGGACCAAGTCCGCCGCCGCCTCCACCGACGTGCTCCGCATGTTCTCCCCGTCGTGGACCTCCACCACCGAGAACCTCTACCTCTGGTGCGGCGGATGGCGCCCCACTGCCGCGCTCCACCTGCTCTACTCCAAGTCCGGCGCGCAGCT-CGAGACCCAGCTCCCGGTGTTCCTCGCCGGCGGCGGCCTCGGGGCGGGCGACCTCGGCGACCTCTCCGCCGAGCAGCTCCAGGCCGCCGACCAGCTTCAGCGGATAACCGTCAGCAAGGAACGGGAGGTCGAGAACGCCGCCGCGAGTGCACAGGAGTCGTTGGCGACGGTGAAGATGGTGGAGCTAGCCGGAGGCGGCGGGATGGACGCGGAGGGGATGGAGATGGAGATGAGGAGCAAGGCGGACGGGATGAGGCGCGTGCTGGAGATGGCAGACGGGCTGAGGCTGGAGACGATGAGGGAGGTGGTGGCGCTGCTCCGCCCGTCGCAGGCCGTGCACTTCCTCATCGCCGCCGCCGAGCTCCACCTCGCCGTGCACGAGTTCGGCAGGCGCAAGGACGGCGACGGCGCCGCGTCGCCGCCGCCGGCGTGACGCGTGCGCGCTCGTGTCGTGTCGTTGCCGTTCCAAGTGCGCGGCGTGGTCTCCGATGCGTAGGCTCGTCGTCTAGCTCTGGTCAACTCAAGTCGTCGCGATAAGCTTTGACTGAGAGAGAAGGGAGAGAAGGAGAGAAAAAACTGACAAGTGGGCCCCACATGTTTTTATTTGTTTTTGCTGACTGTATCGTCACGTGTGTGCCACGTAGGCTAAAAACCGCTTCAAATCGAGTTATGGGGGGTAATTTGTCCGGTTTCAATAGTTTAGGGTATCAAATGTCCGGTTTTGAGGTTCGGGGGGGGGGTAATTCGTACTGTCGCGATTGTTCAGGGGGGTAATTTGTACTTTTTCCTAAAATAAATGGATGG]

[+] EMBL AK106334             [CAGGTTCAGCTCGCCTCCTCCCGTAGCCAACTTCCACGCAGAGATCGCCAACCACCATGCCGCCGCCGTCGCCGCACCCACCTCACCGCAACGGCAACCACGTCCCGGCGCCCTCCGGCGAGTCGTTCGCCAAGTTCTTCGAGTGCTGGATCTCCGAGCAGTCCCGCGACCTCGCCGCGCTCCGCTCCGCCGCGTCGGCGGCGACGAACCCCGCGGCGCCGCCCGACGACGCCGAGCTCCACCGCCTCGTCAACCGGGTCCTCGGCCACTACGAGCACTACTACCGGACCAAGTCCGCCGCCGCCTCCACCGACGTGCTCCGCATGTTCTCCCCGTCGTGGACCTCCACCACCGAGAACCTCTACCTCTGGTGCGGCGGATGGCGCCCCACTGCCGCGCTCCACCTGCTCTACTCCAAGTCCGGCGCGCAGCT CGAGACCCAGCTCCCGGTGTTCCTCGCCGGCGGCGGCCTCGGGGCGGGCGACCTCGGCGACCTCTCCGCCGAGCAGCTCCAGGCCGCCGACCAGCTTCAGCGGATAACCGTCAGCAAGGAACGGGAGGTCGAGAACGCCGCCGCGAGTGCACAGGAGTCGTTGGCGACGGTGAAGATGGTGGAGCTAGCCGGAGGCGGCGGGATGGACGCGGAGGGGATGGAGATGGAGATGAGGAGCAAGGCGGACGGGATGAGGCGCGTGCTGGAGATGGCAGACGGGCTGAGGCTGGAGACGATGAGGGAGGTGGTGGCGCTGCTCCGCCCGTCGCAGGCCGTGCACTTCCTCATCGCCGCCGCCGAGCTCCACCTCGCCGTGCACGAGTTCGGCAGGCGCAAGGACGGCGACGGCGCCGCGTCGCCGCCGCCGGCGTGACGCGTGCGCGCTCGTGTCGTGTCGTTGCCGTTCCAAGTGCGCGGCGTGGTCTCCGATGCGTAGGCTCGTCGTCTAGCTCTGGTCAACTCAAGTCGTCGCGATAAGCTTTGACTGAGAGAGAAGGGAGAGAAGGAGAGAAAAAACTGACAAGTGGGCCCCACATGTTTTTATTTGTTTTTGCTGACTGTATCGTCACGTGTGTGCCACGTAGGCTAAAAACCGCTTCAAATCGAGTTATGGGGGGTAATTTGTCCGGTTTCAATAGTTTAGGGTATCAAATGTCCGGTTTTGAGGTTCGGGGGGGGGGTAATTCGTACTGTCGCGATTGTTCAGGGGGGTAATTTGTACTTTTTCCTAAAATAAATGGATGG]
[+] EMBL CB664073             [                                                     ACCATGCCGCCGCCGTCGCCGCACCCACCTCACCGCAACGGCAACCACGTCCCGGCGCCCTCCGGCGAGTCGTTCGCCAAGTTCTTCGAGTGCTGGATCTCCGAGCAGTCCCGCGACCTCGCCGCGCTCCGCTCCGCCGCGTCGGCGGCGACGAACCCCGCGGCGCCGCCCGACGACGCCGAGCTCCACCGCCTCGTCAACCGGGTCCTCGGCCACTACGAGCACTACTACCGGACCAAGTCCGCCGCCGCCTCCACCGACGTGCTCCGCATGTTCTCCCCGTCGTGGACCTCCACCACCGAGAACCTCTACCTCTGGTGCGGCGGATGGCGCCCCACTGCCGCGCTCCACCTGCTCTACTCCAAGTCCGGCGCGCAGCT CGAGACCCAGCTCCCGGTGTTCCTCGCCGGCGGCGGCCTCGGGGCGGGCGACCTCGGCGACCTCTCCGCCGAGCAGCTCCAGGCCGCCGACCAGCTTCAGCGGATAACCGTCAGCAAGGAACG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL AU057302             [                                                       CATGCCGCCGCCGTCGCCGCACCCACCTCACCGCAACGGCAACCACGTCCCGGCGCCCTCCGGCGAGTNNTTCGCCAAGTTCTTCGAGTNCTGGATCTCCGAGCAGTCCCGCGACCTCGCCGCGCTCCGCTCCGCCGCGTCGGC GCGACGAACCCCGCGGCGCCGCCCGACGACGCCGAGCTCCANCGCCTCGTCAACCGGGTCCTCGGCCACNACGAGCACTACTACCGGACCAAGTCCGCCGCCGCCTCCANCGACGTGCTCCGCATGTTCTCCCCGTCGTGGACCTCCACCACCGAGAACCTCTACCTCTGGTGCGGCGGATGGCGCACCACTGCCGCGCTCCACCTGCTCTACTCCAAGTCCGGCGCGCAGTN CGAGACCCAGCTCCCNGTGTTCCTCGCCGGCGGTGGCCTCGGGGCGGGCGACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AU057824             [                                                                                                                                                                   CCGCGACCTCGCCGCGCTCCGCTCCGCCGCGTCGG GACGACGAACCCCGCGGCGCCGCCCGACGACGCCGAGCTCCACCGCCTCGTCAACCGGGTCCTCGGCCACTACGAGCACTACTACCGGACCAAGTCCGCCGCCGCCTCCACCGACGTGCTCCGCATGTTCTCCCCGTCGTGGACCTCCACCACCGAGAACCTCTACCTCTGGTGCGGCGGATGGCGCCCCACTGCCGCGCTCCACCTGCTCTACTCCAAGTCCGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AU083355             [                                                                                                                                                                                                                                                                                                                                                                                                                   gCTGCTCTACTCCAAGTCCGGCGCGCA CTGCGAGACCCAGCTCCCGGTGTTCCTCGCCGGNGGCGGCCTCGGGGCGGGCGACCTCGGCGACCTCTCCGCCGAGCAGCTCCNGGCCGCCGACCAGCTTCAGCGGATAACCGTCAGCAAGGAACGGGAGATCGAGAACGCCGCCGCGAGTGCACAGGAGTCGTTGGCGACGGTGAAGATGGTGGAGCTAGCCGGAGG GTCGGGATGGACGCGGAGGGGATGGAGATGGAGATGAGGAGCAAGGCGGACGGGATGAGGCGCGTGCNGGAGATNGCAGACGGGCTGAGGCTGGAGACGATGAGGGANGTTGTGGCGCTGCTCCGCCCGTCGCANGCCGTGCACTTCCTCATCGCCGCCGCCGAGNTCCACCTCG                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]




>consensus_14171#1
CAGGTTCAGCTCGCCTCCTCCCGTAGCCAACTTCCACGCAGAGATCGCCAACCACCATGC
CGCCGCCGTCGCCGCACCCACCTCACCGCAACGGCAACCACGTCCCGGCGCCCTCCGGCG
AGTCGTTCGCCAAGTTCTTCGAGTGCTGGATCTCCGAGCAGTCCCGCGACCTCGCCGCGC
TCCGCTCCGCCGCGTCGGCGGCGACGAACCCCGCGGCGCCGCCCGACGACGCCGAGCTCC
ACCGCCTCGTCAACCGGGTCCTCGGCCACTACGAGCACTACTACCGGACCAAGTCCGCCG
CCGCCTCCACCGACGTGCTCCGCATGTTCTCCCCGTCGTGGACCTCCACCACCGAGAACC
TCTACCTCTGGTGCGGCGGATGGCGCCCCACTGCCGCGCTCCACCTGCTCTACTCCAAGT
CCGGCGCGCAGCTCGAGACCCAGCTCCCGGTGTTCCTCGCCGGCGGCGGCCTCGGGGCGG
GCGACCTCGGCGACCTCTCCGCCGAGCAGCTCCAGGCCGCCGACCAGCTTCAGCGGATAA
CCGTCAGCAAGGAACGGGAGGTCGAGAACGCCGCCGCGAGTGCACAGGAGTCGTTGGCGA
CGGTGAAGATGGTGGAGCTAGCCGGAGGCGGCGGGATGGACGCGGAGGGGATGGAGATGG
AGATGAGGAGCAAGGCGGACGGGATGAGGCGCGTGCTGGAGATGGCAGACGGGCTGAGGC
TGGAGACGATGAGGGAGGTGGTGGCGCTGCTCCGCCCGTCGCAGGCCGTGCACTTCCTCA
TCGCCGCCGCCGAGCTCCACCTCGCCGTGCACGAGTTCGGCAGGCGCAAGGACGGCGACG
GCGCCGCGTCGCCGCCGCCGGCGTGACGCGTGCGCGCTCGTGTCGTGTCGTTGCCGTTCC
AAGTGCGCGGCGTGGTCTCCGATGCGTAGGCTCGTCGTCTAGCTCTGGTCAACTCAAGTC
GTCGCGATAAGCTTTGACTGAGAGAGAAGGGAGAGAAGGAGAGAAAAAACTGACAAGTGG
GCCCCACATGTTTTTATTTGTTTTTGCTGACTGTATCGTCACGTGTGTGCCACGTAGGCT
AAAAACCGCTTCAAATCGAGTTATGGGGGGTAATTTGTCCGGTTTCAATAGTTTAGGGTA
TCAAATGTCCGGTTTTGAGGTTCGGGGGGGGGGTAATTCGTACTGTCGCGATTGTTCAGG
GGGGTAATTTGTACTTTTTCCTAAAATAAATGGATGG

consensusID : consensus_14171#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 660
fasta sequence

                              [CCAGCTTCAGCGGATATCCGTCAGCAAGGAACGGGAGATCGAGAACGCCGCCGCGAGTGCACAGGAGTCGTTGGCGACGGTGAAGATGGTGGAGCTAGCCGGAGGCGGCGGGATGGACGCGGAGGGGATGGAGATGGAGATGAGGAGCAAGGCGGACGGGATGAGGCGCGTGCTGGAGATGGCAGACGGGCTGAGGCTGGAGACGATGAGGGAGGTGGTGGCGCTGCTCCGCCCGTCGCAGGCCGTGCACTTCCTCATCGCCGCCGCCGAGCTCCACCTCGCCGTGCACGAGTTCGGCAGGCGCAAGGACGGCGACGGCGCCGCGTCGCCGCCGCCGGCGTGACGCGTGCGCGCTCGTGT-CGTGTCGTTGCCGTTCCAAGTGCGCGGCGTGGTCTCCGATGCGTAGGCTCGTCGTCTAGCTCTGGTCAACTCAAGTCGTCGCGATAAGCTTTGACCGATATTTATTTATGCAGTACTCGTACACTAGTATTTCTCTCTCTCTCTCTTTTTTTTCTGCGATGAAGCCGATGATACCTGTAGGGTTTTTTTTTTCTTTCTTTTTTGCGTTTGCATGTGATGGAATTTTACTACCGTACTTTGGAGCAGCTGTTTCTATATAGACAGTGAGCTACCCTGCGTGATATTTCTAAAAAAAAAAAA]

[-] EMBL CB664074             [CCAGCTTCAGCGGATATCCGTCAGCAAGGAACGGGAGATCGAGAACGCCGCCGCGAGTGCACAGGAGTCGTTGGCGACGGTGAAGATGGTGGAGCTAGCCGGAGGCGGCGGGATGGACGCGGAGGGGATGGAGATGGAGATGAGGAGCAAGGCGGACGGGATGAGGCGCGTGCTGGAGATGGCAGACGGGCTGAGGCTGGAGACGATGAGGGAGGTGGTGGCGCTGCTCCGCCCGTCGCAGGCCGTGCACTTCCTCATCGCCGCCGCCGAGCTCCACCTCGCCGTGCACGAGTTCGGCAGGCGCAAGGACGGCGACGGCGCCGCGTCGCCGCCGCCGGCGTGACGCGTGCGCGCTCGTGT CGTGTCGTTGCCGTTCCAAGTGCGCGGCGTGGTCTCCGATGCGTAGGCTCGTCGTCTAGCTCTGGTCAACTCAAGTCGTCGCGATAAGCTTTGACCGATATTTATTTATGCAGTACTCGTACACTAGTATTTCTCTCTCTCTCTCTTTTTTTTCTGCGATGAAGCCGATGATACCTGTAGGGTTTTTTTTTTCTTTCTTTTTTGCGTTTGCATGTGATGGAATTTTACTACCGTACTTTGGAGCAGCTGTTTCTATATAGACAGTGAGCTACCCTGCGT                     ]
[+] EMBL AU083356             [                                                                                                                                                                                                                                                                                                                                                      aacCGTGCGCGCTCGTGTNCGTGTCGTTGCCGTTCCAAGTGCGCGGCGTGGTCTCCGATGCGTAGGCTCGTCGTCTAGCTCTGGTCAANTCAAGTCGTCGCGATAAGCTTTGACCGATATTTATTTATGCAGTACTCGTACACTAGTATTTCTCTCTCTCTCTCTTTTTTTTCTGCGATGAAGCCGATGATACCTGTAGGGTTTTTTTTTTCTTTCTTTTTTGCGTTTGCATGTGATGGAATTTTACTACCGTACTTTGGAGCAGCTGTTTCTATATAGACAGTGAGCTAACCTGCGTGATATTTCTAAAAAAAAAAAA]




>consensus_14171#2
CCAGCTTCAGCGGATATCCGTCAGCAAGGAACGGGAGATCGAGAACGCCGCCGCGAGTGC
ACAGGAGTCGTTGGCGACGGTGAAGATGGTGGAGCTAGCCGGAGGCGGCGGGATGGACGC
GGAGGGGATGGAGATGGAGATGAGGAGCAAGGCGGACGGGATGAGGCGCGTGCTGGAGAT
GGCAGACGGGCTGAGGCTGGAGACGATGAGGGAGGTGGTGGCGCTGCTCCGCCCGTCGCA
GGCCGTGCACTTCCTCATCGCCGCCGCCGAGCTCCACCTCGCCGTGCACGAGTTCGGCAG
GCGCAAGGACGGCGACGGCGCCGCGTCGCCGCCGCCGGCGTGACGCGTGCGCGCTCGTGT
CGTGTCGTTGCCGTTCCAAGTGCGCGGCGTGGTCTCCGATGCGTAGGCTCGTCGTCTAGC
TCTGGTCAACTCAAGTCGTCGCGATAAGCTTTGACCGATATTTATTTATGCAGTACTCGT
ACACTAGTATTTCTCTCTCTCTCTCTTTTTTTTCTGCGATGAAGCCGATGATACCTGTAG
GGTTTTTTTTTTCTTTCTTTTTTGCGTTTGCATGTGATGGAATTTTACTACCGTACTTTG
GAGCAGCTGTTTCTATATAGACAGTGAGCTACCCTGCGTGATATTTCTAAAAAAAAAAAA

consensusID : consensus_14171#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 588
fasta sequence

                              [TTTTTTTTTTGCACTTGGACTAAATTGTAATTTGCAACTAATTTCACATTACATACCTTCCCTTCTACACATGCATGGAAGAAGCTTATACTTCAGCTTAAAACAACAACCATGTATATACTTCTTTGCACTGCTAAACAAGTTGGTAAACTGGCAAAATCTGACGAAGCTTCTCGAACAGGGTAAAATAAAGGAAAAAGTACGAATTACCCCCCAACAACCGCGACAGTACGAATTACCCATCCGAACCTCAAAACCGGATATTTGATACCCTAAACTATTGAAACCGGACAAATTACCCCCCTAACTTGATTTGAAGCGGTTTTCAGCCTACGTGGCACACACGTGGCGATACAGTCAGCAAAAACAAATAAAAACAGGTGGGAGCCCACCTGTCATTTTTTCTCTCCTCTCCCTTCTCTCTCTCGGTCAACACAGGCTACGGTGGGGGGCGGCTGACAACTGCGCNATCTCCACCCGCAAGGTTGTGATGGGCCATGCGGCCATGAAGNAATACGGAANGGCCCCCACTCCGGACATCACTCCCNGGATNGNTCGGAACCACCCTCCGGCCGGACGGNANGGGAC]

[+] EMBL AA753278             [TTTTTTTTTTGCACTTGGACTAAATTGTAATTTGCAACTAATTTCACATTACATACCTTCCCTTCTACACATGCATGGAAGAAGCTTATACTTCAGCTTAAAACAACAACCATGTATATACTTCTTTGCACTGCTAAACAAGTTGGTAAACTGGCAAAATCTGACGAAGCTTCTCGAACAGGGTAAAATAAAGGAAAAAGTACGAATTACCCCCCAACAACCGCGACAGTACGAATTACCCATCCGAACCTCAAAACCGGATATTTGATACCCTAAACTATTGAAACCGGACAAATTACCCCCCTAACTTGATTTGAAGCGGTTTTCAGCCTACGTGGCACACACGTGGCGATACAGTCAGCAAAAACAAATAAAAACAGGTGGGAGCCCACCTGTCATTTTTTCTCTCCTCTCCCTTCTCTCTCTCGGTCAACACAGGCTACGGTGGGGGGCGGCTGACAACTGCGCNATCTCCACCCGCAAGGTTGTGATGGGCCATGCGGCCATGAAGNAATACGGAANGGCCCCCACTCCGGACATCACTCCCNGGATNGNTCGGAACCACCCTCCGGCCGGACGGNANGGGAC]




>consensus_14171#3
TTTTTTTTTTGCACTTGGACTAAATTGTAATTTGCAACTAATTTCACATTACATACCTTC
CCTTCTACACATGCATGGAAGAAGCTTATACTTCAGCTTAAAACAACAACCATGTATATA
CTTCTTTGCACTGCTAAACAAGTTGGTAAACTGGCAAAATCTGACGAAGCTTCTCGAACA
GGGTAAAATAAAGGAAAAAGTACGAATTACCCCCCAACAACCGCGACAGTACGAATTACC
CATCCGAACCTCAAAACCGGATATTTGATACCCTAAACTATTGAAACCGGACAAATTACC
CCCCTAACTTGATTTGAAGCGGTTTTCAGCCTACGTGGCACACACGTGGCGATACAGTCA
GCAAAAACAAATAAAAACAGGTGGGAGCCCACCTGTCATTTTTTCTCTCCTCTCCCTTCT
CTCTCTCGGTCAACACAGGCTACGGTGGGGGGCGGCTGACAACTGCGCNATCTCCACCCG
CAAGGTTGTGATGGGCCATGCGGCCATGAAGNAATACGGAANGGCCCCCACTCCGGACAT
CACTCCCNGGATNGNTCGGAACCACCCTCCGGCCGGACGGNANGGGAC

consensusID : consensus_14171#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 380
fasta sequence

                              [AGGATTCGGNACGAATCGCTCCTCCCGTAGCCAACTTCCACGCAGAGATCNCAACCACCATGCCGCCGCCGTCGCCGCACCACCTCACCGCAACGGGAACCACGTCCCGGNGCCCTCCGGNGAGTCGTTCGCCAAGTTCTTCGAGTGCTGGATCTCCGAGCAGTCCCGCGANCTCGCCGCGCTCCGCTCCGCCGCGTCGGGGGGGAAGAANCCCGCGGGGCCGCCCGACGANGCCGAAGCTCCACGCCTCGTCAACCGGGTCCTCGGGCACTACNAACACTNCTNNCGGANCAAGTCCGCCGCCGNCTCCACCGANGTGCTCCGCATGTTCTCCCCNTCGTGGAACTCCACACNANAACTCTACCTCTGGTGCGGGGGAT]

[+] EMBL AA752720             [AGGATTCGGNACGAATCGCTCCTCCCGTAGCCAACTTCCACGCAGAGATCNCAACCACCATGCCGCCGCCGTCGCCGCACCACCTCACCGCAACGGGAACCACGTCCCGGNGCCCTCCGGNGAGTCGTTCGCCAAGTTCTTCGAGTGCTGGATCTCCGAGCAGTCCCGCGANCTCGCCGCGCTCCGCTCCGCCGCGTCGGGGGGGAAGAANCCCGCGGGGCCGCCCGACGANGCCGAAGCTCCACGCCTCGTCAACCGGGTCCTCGGGCACTACNAACACTNCTNNCGGANCAAGTCCGCCGCCGNCTCCACCGANGTGCTCCGCATGTTCTCCCCNTCGTGGAACTCCACACNANAACTCTACCTCTGGTGCGGGGGAT]




>consensus_14171#4
AGGATTCGGNACGAATCGCTCCTCCCGTAGCCAACTTCCACGCAGAGATCNCAACCACCA
TGCCGCCGCCGTCGCCGCACCACCTCACCGCAACGGGAACCACGTCCCGGNGCCCTCCGG
NGAGTCGTTCGCCAAGTTCTTCGAGTGCTGGATCTCCGAGCAGTCCCGCGANCTCGCCGC
GCTCCGCTCCGCCGCGTCGGGGGGGAAGAANCCCGCGGGGCCGCCCGACGANGCCGAAGC
TCCACGCCTCGTCAACCGGGTCCTCGGGCACTACNAACACTNCTNNCGGANCAAGTCCGC
CGCCGNCTCCACCGANGTGCTCCGCATGTTCTCCCCNTCGTGGAACTCCACACNANAACT
CTACCTCTGGTGCGGGGGAT

consensusID : consensus_14171#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 276
fasta sequence

                              [ACCACGTCCCGGCGCCCTCCGGCGAGTCGTTCGCCAAGTTCTTCGAGTGCTGGNTCTCCGAGCAGTCCCGCNACCTCGCCGCGCTCCGNTCCGCCGCNTCGGGCGANCGAACCCCGCGGCGCCGCCCGANGACGCCGAGCTCCACCGCNTCGTAAACCGGNTCCTCGGCCACTACGAGCACTACTACCGGACCAAGTCCGCCGCCGCCTCCACCGACGTGCTCCGAATGTNCTCCCGTNGTGGACCTCCACCACCGAGAAACTTTTACTTTTGGTN]

[+] EMBL C28903               [ACCACGTCCCGGCGCCCTCCGGCGAGTCGTTCGCCAAGTTCTTCGAGTGCTGGNTCTCCGAGCAGTCCCGCNACCTCGCCGCGCTCCGNTCCGCCGCNTCGGGCGANCGAACCCCGCGGCGCCGCCCGANGACGCCGAGCTCCACCGCNTCGTAAACCGGNTCCTCGGCCACTACGAGCACTACTACCGGACCAAGTCCGCCGCCGCCTCCACCGACGTGCTCCGAATGTNCTCCCGTNGTGGACCTCCACCACCGAGAAACTTTTACTTTTGGTN]




>consensus_14171#5
ACCACGTCCCGGCGCCCTCCGGCGAGTCGTTCGCCAAGTTCTTCGAGTGCTGGNTCTCCG
AGCAGTCCCGCNACCTCGCCGCGCTCCGNTCCGCCGCNTCGGGCGANCGAACCCCGCGGC
GCCGCCCGANGACGCCGAGCTCCACCGCNTCGTAAACCGGNTCCTCGGCCACTACGAGCA
CTACTACCGGACCAAGTCCGCCGCCGCCTCCACCGACGTGCTCCGAATGTNCTCCCGTNG
TGGACCTCCACCACCGAGAAACTTTTACTTTTGGTN

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14171#0      AACGAAAATATGATGTACTATATATATCCTCTCTTTATCTTCTAGGAACAAAATTGGAAC 60
consensus_14171#2      ------------------------------------------------------------
consensus_14171#1      ------------------------------------------------------------
consensus_14171#4      ------------------------------------------------------------
consensus_14171#5      ------------------------------------------------------------
consensus_14171#3      ------------------------------------------------------------
                                                                                   

consensus_14171#0      AAAATTAGATGTGATACCTAACCCTTCAAAACTTGGCTTTGAGACAATGACCGACATGAT 120
consensus_14171#2      ------------------------------------------------------------
consensus_14171#1      ------------------------------------------------------------
consensus_14171#4      ------------------------------------------------------------
consensus_14171#5      ------------------------------------------------------------
consensus_14171#3      ------------------------------------------------------------
                                                                                   

consensus_14171#0      CCAGCTTTATAAACGCCTCCCCTTCCACTTCACTCTTCTTCACTCCACCACAGGTTCAGC 180
consensus_14171#2      ------------------------------------------------------------
consensus_14171#1      ------------------------------------------------------------
consensus_14171#4      ------------------------------------------------------------
consensus_14171#5      ------------------------------------------------------------
consensus_14171#3      ------------------------------------------------------------
                                                                                   

consensus_14171#0      TCGCCTCCTCCCGTAGCCAACTTCCACGCAGAGATCGCCAACCACCATGCCGCCGCCGTC 240
consensus_14171#2      ------------------------------------------------------------
consensus_14171#1      ------------------------------------------------------------
consensus_14171#4      ------------------------------------------------------------
consensus_14171#5      ------------------------------------------------------------
consensus_14171#3      ------------------------------------------------------------
                                                                                   

consensus_14171#0      GCCGCACCCACCTCACCGCAACGGCAACCACGTCCCGGCGCCCTCCGGCGAGTCGTTCGC 300
consensus_14171#2      ------------------------------------------------------------
consensus_14171#1      ------------------------------------------------------------
consensus_14171#4      ------------------------------------------------------------
consensus_14171#5      ------------------------------------------------------------
consensus_14171#3      ------------------------------------------------------------
                                                                                   

consensus_14171#0      CAAGTTCTTCGAGTGCTGGATCTCCGAGCAGTCCCGCGACCTCGCCGCGCTCCGCTCCGC 360
consensus_14171#2      ------------------------------------------------------------
consensus_14171#1      ------------------------------------------------------------
consensus_14171#4      ------------------------------------------------------------
consensus_14171#5      ------------------------------------------------------------
consensus_14171#3      ------------------------------------------------------------
                                                                                   

consensus_14171#0      CGCGTCGGCGGCGACGAACCCCGCGGCGCCGCCCGACGACGCCGAGCTCCACCGCCTCGT 420
consensus_14171#2      ------------------------------------------------------------
consensus_14171#1      ------------------------------------------------------------
consensus_14171#4      ------------------------------------------------------------
consensus_14171#5      ------------------------------------------------------------
consensus_14171#3      ------------------------------------------------------------
                                                                                   

consensus_14171#0      CAACCGGGTCCTCGGCCACTACGAGCACTACTACCGGACCAAGTCCGCCGCCGCCTCCAC 480
consensus_14171#2      ------------------------------------------------------------
consensus_14171#1      ------------------------------------------------------------
consensus_14171#4      ------------------------------------------------------------
consensus_14171#5      ------------------------------------------------------------
consensus_14171#3      ------------------------------------------------------------
                                                                                   

consensus_14171#0      CGACGTGCTCCGCATGTTCTCCCCGTCGTGGACCTCCACCACCGAGAACCTCTACCTCTG 540
consensus_14171#2      ------------------------------------------------------------
consensus_14171#1      ------------------------------------------------------------
consensus_14171#4      ------------------------------------------------------------
consensus_14171#5      ------------------------------------------------------------
consensus_14171#3      ------------------------------------------------------------
                                                                                   

consensus_14171#0      GTGCGGCGGATGGCGCCCCACTGCCGCGCTCCACCTGCTCTACTCCAAGTCCGGCGCGCA 600
consensus_14171#2      ------------------------------------------------------------
consensus_14171#1      ------------------------------------------------------------
consensus_14171#4      ------------------------------------------------------------
consensus_14171#5      ------------------------------------------------------------
consensus_14171#3      ------------------------------------------------------------
                                                                                   

consensus_14171#0      GCTCGAGACCCAGCTCCCGGTGTTCCTCGCCGGCGGCGGCCTCGGGGCGGGCGACCTCGG 660
consensus_14171#2      ------------------------------------------------------------
consensus_14171#1      ------------------------------------------------------------
consensus_14171#4      ------------------------------------------------------------
consensus_14171#5      ------------------------------------------------------------
consensus_14171#3      ------------------------------------------------------------
                                                                                   

consensus_14171#0      CGACCTCTCCGCCGAGCAGCTCCAGGCCGCCGACCAGCTTCAGCGGATAACCGTCAGCAA 720
consensus_14171#2      ---------------------------------CCAGCTTCAGCGGATATCCGTCAGCAA 27
consensus_14171#1      ------------------------------------------------------------
consensus_14171#4      ------------------------------------------------------------
consensus_14171#5      ------------------------------------------------------------
consensus_14171#3      ------------------------------------------------------------
                                                                                   

consensus_14171#0      GGAACGGGAGATCGAGAACGCCGCCGCGAGTGCACAGGTGAGTGATGGTTAATTTGTTCT 780
consensus_14171#2      GGAACGGGAGATCGAGAACGCCGCCGCGAGTGCACAGG---------------------- 65
consensus_14171#1      ------------------------------------------------------------
consensus_14171#4      ------------------------------------------------------------
consensus_14171#5      ------------------------------------------------------------
consensus_14171#3      ------------------------------------------------------------
                                                                                   

consensus_14171#0      TTCATCAGTGAGGTGAGCTCGATCAGCATCCGGATGCAAACGTGAACAATGCAGGAGTCG 840
consensus_14171#2      -------------------------------------------------------AGTCG 70
consensus_14171#1      ------------------------------------------------------------
consensus_14171#4      ------------------------------------------------------------
consensus_14171#5      ------------------------------------------------------------
consensus_14171#3      ------------------------------------------------------------
                                                                                   

consensus_14171#0      TTGGCGACGGTGAAGATGGTGGAGCTAGCCGGAGGCGG--CGGGATGGACGCGGAGGGGA 898
consensus_14171#2      TTGGCGACGGTGAAGATGGTGGAGCTAGCCGGAGGCGG--CGGGATGGACGCGGAGGGGA 128
consensus_14171#1      ------------------------CAGGTTCAGCTCGCCTCCTCCCGTAGCCAACTTCCA 36
consensus_14171#4      -------------------AGGATTCGGNACGAATCGC-TCCTCCCGTAGCCAACTTCCA 40
consensus_14171#5      ------------------------------------------------------------
consensus_14171#3      --------------TTTTTTTTTTGCACTTGGACTAAATTGTAATTTGCAACTAATTTCA 46
                                                                                   

consensus_14171#0      TGGAGATGGAGATGAGGAGCAAGGCGGACGGGATGAGGCGCGTGCTGGAGATGGC--AGA 956
consensus_14171#2      TGGAGATGGAGATGAGGAGCAAGGCGGACGGGATGAGGCGCGTGCTGGAGATGGC--AGA 186
consensus_14171#1      CGCAGAGATCGCCAACCACCATGCCGCCGCCGTCGCCGCACCCACCTCACCGCAA--CGG 94
consensus_14171#4      CGCAGAGATCNC-AACCACCATGCCGCCGCCGTCGCCGCACC-ACCTCACCGCAA--CGG 96
consensus_14171#5      ------------------------------------------------------------
consensus_14171#3      CATTACATACCTTCCCTTCTACACATGCATGGAAGAAGCTTATACTTCAGCTTAAAACAA 106
                                                                                   

consensus_14171#0      CGGGCTGAGGCTGGAGACGATGAGGGAGGTGGTGGCGCTGCTCCGCCCGTCGCAGGCCGT 1016
consensus_14171#2      CGGGCTGAGGCTGGAGACGATGAGGGAGGTGGTGGCGCTGCTCCGCCCGTCGCAGGCCGT 246
consensus_14171#1      CAACCACGTCCCGGCGCCCTCCGGCGAGTCGTTCGCCAAGTTCTTCGAGTGCTGGATCTC 154
consensus_14171#4      GAACCACGTCCCGGNGCCCTCCGGNGAGTCGTTCGCCAAGTTCTTCGAGTGCTGGATCTC 156
consensus_14171#5      --ACCACGTCCCGGCGCCCTCCGGCGAGTCGTTCGCCAAGTTCTTCGAGTGCTGGNTCTC 58
consensus_14171#3      CAACCATGT----ATATACTTCTTTGCACTGCTAAACAAGTTGGTAAACTGGCAAAATCT 162
                           *                    *    * *      * *       *          

consensus_14171#0      GCACTTCCTCATCGCCGCCGCCGAGCTCCACCTCGCCGTGC--ACGAGTTCGGCAGGCGC 1074
consensus_14171#2      GCACTTCCTCATCGCCGCCGCCGAGCTCCACCTCGCCGTGC--ACGAGTTCGGCAGGCGC 304
consensus_14171#1      CGAGCAGTCCCGCGACCTCGCCGCGCTCCGCTCCGCCGCGTCGGCGGCGACGAACCCCGC 214
consensus_14171#4      CGAGCAGTCCCGCGANCTCGCCGCGCTCCGCTCCGCCGCGTCGGGGGGGAAGAANCCCGC 216
consensus_14171#5      CGAGCAGTCCCGCNACCTCGCCGCGCTCCGNTCCGCCGCNTCGG-GCGANCGAACCCCGC 117
consensus_14171#3      GACGAAGCTTCTCGAACAGGGTAAAATAAAG------GAAAAAGTACGAATTACCCCCCA 216
                                   *      *      *          *                   *  

consensus_14171#0      AAGGACGGC-GACGGCGCCGCGTCGCCGCCGCCGGCGTG-ACGCGTGCGCGCTCGTGTCG 1132
consensus_14171#2      AAGGACGGC-GACGGCGCCGCGTCGCCGCCGCCGGCGTG-ACGCGTGCGCGCTCGTGTCG 362
consensus_14171#1      GGCGCCGCCCGACGACGCCGAGCTCCACCGCCTCGTCAA-CCGGGTCCTCGGCCACTACG 273
consensus_14171#4      GGGGCCGCCCGACGANGCCGAAGCTCCACGCCTCGTCAA-CCGGGTCCTCGGGCACTACN 275
consensus_14171#5      GGCGCCGCCCGANGACGCCGAGCTCCACCGCNTCGTAAA-CCGGNTCCTCGGCCACTACG 176
consensus_14171#3      ACAACCGCGACAGTACGAATTACCCATCCGAACCTCAAAACCGGATATTTGATACCCTAA 276
                            **    *    *           *            **  *    *         

consensus_14171#0      --TGTCGTTGCCGTTCCAAGTGCGCGGCGTGGTCTCCGATGCGTAGGCTCGTCGTCTAGC 1190
consensus_14171#2      --TGTCGTTGCCGTTCCAAGTGCGCGGCGTGGTCTCCGATGCGTAGGCTCGTCGTCTAGC 420
consensus_14171#1      AGCACTACTACCGGACCAAGTCCGC--CGCCGCCTCCACCG-ACGTGCTCCGCATGTTCT 330
consensus_14171#4      AACACTNCTNNCGGANCAAGTCCGC--CGCCGNCTCCACCG-ANGTGCTCCGCATGTTCT 332
consensus_14171#5      AGCACTACTACCGGACCAAGTCCGC--CGCCGCCTCCACCG-ACGTGCTCCGAATGTNCT 233
consensus_14171#3      ACTATTGAAACCGGACAAATTACCC--CCCTAACTTGATTTGAAGCGGTTTTCA--GCCT 332
                                  **    ** * * *  *     **           * *           

consensus_14171#0      TCTGGTCAACTCAAGTCGTC-GCGATAAGCTTTGACCGATATTTATTTATGCAGTACTCG 1249
consensus_14171#2      TCTGGTCAACTCAAGTCGTC-GCGATAAGCTTTGACCGATATTTATTTATGCAGTACTCG 479
consensus_14171#1      CCCCGTCGTGGACCTCCACCACCGAGAA-CCTCTACCTCTGGTGCGGCGGATGGCGCCCC 389
consensus_14171#4      CCCCNTCGTGGAACTCCAC--ACNANAA-C-TCTACCTCTGGTGCGGGGGAT-------- 380
consensus_14171#5      CCC-GTNGTGGACCTCCACCACCGAGAAACTTTTACTTTTGGTN---------------- 276
consensus_14171#3      ACGTGGCACACACGTGGCGATACAGTCAGCAAAAACAAATAA-AAACAGGTGGGAGCCCA 391
                        *                    *    * *    **   *                    

consensus_14171#0      TACACTAGTATTTCTCTCTCTCTCTCTTTTTTTTCTGCGATGAAGCCGATGATACCTGTA 1309
consensus_14171#2      TACACTAGTATTTCTCTCTCTCTCTCTTTTTTTTCTGCGATGAAGCCGATGATACCTGTA 539
consensus_14171#1      ACTGCCGCGCTCCACCTGCTCTACTCCAAGTCCGGCGCGCAGCTCGAGACCCAGCTCCCG 449
consensus_14171#4      ------------------------------------------------------------
consensus_14171#5      ------------------------------------------------------------
consensus_14171#3      CCTGTCATTTTTTCTCTCCTCTCCCTTCTCTCTCTCGGTCAACACAGGCTACGGTGGGGG 451
                                                                                   

consensus_14171#0      GGGTTTTTTTTTTCTTTCTTTTTTGCGTTTGCATGTGATGGAATTTTACTACCGTACTTT 1369
consensus_14171#2      GGGTTTTTTTTTTCTTTCTTTTTTGCGTTTGCATGTGATGGAATTTTACTACCGTACTTT 599
consensus_14171#1      GTGTTCCTCGCCGGCGGCGGCCTCGGGGCGGGCGACCTCGGCGACCT-CTCCGCCGAGCA 508
consensus_14171#4      ------------------------------------------------------------
consensus_14171#5      ------------------------------------------------------------
consensus_14171#3      GCGGCTGACAACTGCG-CNATCTCCACCCGCAAGGTTGTGATGGGCCATGCGGCCATGAA 510
                                                                                   

consensus_14171#0      GGAGCAGCTGTTTCTATATAGACAGTGAGCTAACCTGCGTGATATTTCTAATCAATTCGG 1429
consensus_14171#2      GGAGCAGCTGTTTCTATATAGACAGTGAGCTACCCTGCGTGATATTTCTAAAAAAAAAAA 659
consensus_14171#1      GCTCCAGGCCGCCGACCAGCTTCAGCGGATAACCGTCAGCAAGGAACGGGAGGTCGAGAA 568
consensus_14171#4      ------------------------------------------------------------
consensus_14171#5      ------------------------------------------------------------
consensus_14171#3      GNAATACGGAANGGCCCCCACTCCGGACATCACTCCCNGGATNGNTCGGAACCACCCTCC 570
                                                                                   

consensus_14171#0      GAAGGGAAGGATAAAATTGTTTTTTGTTGCTATGTGTTCGAATCTTAATGTTAATCACA- 1488
consensus_14171#2      A----------------------------------------------------------- 660
consensus_14171#1      CGCCGCCGCGAGTGCACAGGAGTCGTTGGCGACGGTGAAGATGGTGGAGCTAGCCGGAGG 628
consensus_14171#4      ------------------------------------------------------------
consensus_14171#5      ------------------------------------------------------------
consensus_14171#3      GGCCGGACGGNANGGGAC------------------------------------------ 588
                                                                                   

consensus_14171#0      ------------------------------------------------------------
consensus_14171#2      ------------------------------------------------------------
consensus_14171#1      CGGCGGGATGGACGCGGAGGGGATGGAGATGGAGATGAGGAGCAAGGCGGACGGGATGAG 688
consensus_14171#4      ------------------------------------------------------------
consensus_14171#5      ------------------------------------------------------------
consensus_14171#3      ------------------------------------------------------------
                                                                                   

consensus_14171#0      ------------------------------------------------------------
consensus_14171#2      ------------------------------------------------------------
consensus_14171#1      GCGCGTGCTGGAGATGGCAGACGGGCTGAGGCTGGAGACGATGAGGGAGGTGGTGGCGCT 748
consensus_14171#4      ------------------------------------------------------------
consensus_14171#5      ------------------------------------------------------------
consensus_14171#3      ------------------------------------------------------------
                                                                                   

consensus_14171#0      ------------------------------------------------------------
consensus_14171#2      ------------------------------------------------------------
consensus_14171#1      GCTCCGCCCGTCGCAGGCCGTGCACTTCCTCATCGCCGCCGCCGAGCTCCACCTCGCCGT 808
consensus_14171#4      ------------------------------------------------------------
consensus_14171#5      ------------------------------------------------------------
consensus_14171#3      ------------------------------------------------------------
                                                                                   

consensus_14171#0      ------------------------------------------------------------
consensus_14171#2      ------------------------------------------------------------
consensus_14171#1      GCACGAGTTCGGCAGGCGCAAGGACGGCGACGGCGCCGCGTCGCCGCCGCCGGCGTGACG 868
consensus_14171#4      ------------------------------------------------------------
consensus_14171#5      ------------------------------------------------------------
consensus_14171#3      ------------------------------------------------------------
                                                                                   

consensus_14171#0      ------------------------------------------------------------
consensus_14171#2      ------------------------------------------------------------
consensus_14171#1      CGTGCGCGCTCGTGTCGTGTCGTTGCCGTTCCAAGTGCGCGGCGTGGTCTCCGATGCGTA 928
consensus_14171#4      ------------------------------------------------------------
consensus_14171#5      ------------------------------------------------------------
consensus_14171#3      ------------------------------------------------------------
                                                                                   

consensus_14171#0      ------------------------------------------------------------
consensus_14171#2      ------------------------------------------------------------
consensus_14171#1      GGCTCGTCGTCTAGCTCTGGTCAACTCAAGTCGTCGCGATAAGCTTTGACTGAGAGAGAA 988
consensus_14171#4      ------------------------------------------------------------
consensus_14171#5      ------------------------------------------------------------
consensus_14171#3      ------------------------------------------------------------
                                                                                   

consensus_14171#0      ------------------------------------------------------------
consensus_14171#2      ------------------------------------------------------------
consensus_14171#1      GGGAGAGAAGGAGAGAAAAAACTGACAAGTGGGCCCCACATGTTTTTATTTGTTTTTGCT 1048
consensus_14171#4      ------------------------------------------------------------
consensus_14171#5      ------------------------------------------------------------
consensus_14171#3      ------------------------------------------------------------
                                                                                   

consensus_14171#0      ------------------------------------------------------------
consensus_14171#2      ------------------------------------------------------------
consensus_14171#1      GACTGTATCGTCACGTGTGTGCCACGTAGGCTAAAAACCGCTTCAAATCGAGTTATGGGG 1108
consensus_14171#4      ------------------------------------------------------------
consensus_14171#5      ------------------------------------------------------------
consensus_14171#3      ------------------------------------------------------------
                                                                                   

consensus_14171#0      ------------------------------------------------------------
consensus_14171#2      ------------------------------------------------------------
consensus_14171#1      GGTAATTTGTCCGGTTTCAATAGTTTAGGGTATCAAATGTCCGGTTTTGAGGTTCGGGGG 1168
consensus_14171#4      ------------------------------------------------------------
consensus_14171#5      ------------------------------------------------------------
consensus_14171#3      ------------------------------------------------------------
                                                                                   

consensus_14171#0      ------------------------------------------------------------
consensus_14171#2      ------------------------------------------------------------
consensus_14171#1      GGGGGTAATTCGTACTGTCGCGATTGTTCAGGGGGGTAATTTGTACTTTTTCCTAAAATA 1228
consensus_14171#4      ------------------------------------------------------------
consensus_14171#5      ------------------------------------------------------------
consensus_14171#3      ------------------------------------------------------------
                                                                                   

consensus_14171#0      ---------
consensus_14171#2      ---------
consensus_14171#1      AATGGATGG 1237
consensus_14171#4      ---------
consensus_14171#5      ---------
consensus_14171#3      ---------