These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14177#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 1821 fasta sequence [CCCCCCAAATCCCCCTCCTCCTCCGCCACCGCCATGGCTCGCCTCCTCCTCCCCCTCCCCATCGCCGCCGCCGCCGCCTCCCGCCTCCGCCTCCCCGTCCTCTCCTCCTCCGTGGCGCGGCGTGAGGCGCTGCTCTTCGGGGGGAGGGTGGCGGCGGCGAGGGCGCCGGTGAGGCTGGCGAGGAGAGGGGTGAGCGCCGGGGCGGAGGCGGGCGGGTCGTCGTCGGCCGCCGCGGCAGCGCAGGTGATCGGGCAGGACGAGGCGGTGGAGTGGGTCAAGAAGGACCGGAGGCGCATGCTCCATGTCGTCTACCGCGTCGGCGACCTCGACAAGACGATCAAGTTTTACACCGAGTGCTTGGGGATGAAGCTGTTGCGCAAGCGCGACATTCCGGAGGAGAGGTATACCAATGCTTTTCTCGGGTACGGGCCTGAGGACTCGCATTTTGTTGTGGAGCTCACTTACAATTATGGTGTGGAAAGTTATGATATCGGGACTGCTTTCGGTCACTTCGGGATTGCTGTCGAGGACGTTGCAAAAACAGTAGATCTCATTAAAGCCAAGGGAGGAACGGTAACAAGAGAACCAGGACCTGTAAAAGGTGGAAAGTCTGTAATTGCTTTTATTGAAGATCCTGATGGTTACAAATTTGAGCTTATAGAAAGAGGTCCTACACCTGAGCCTTTATGCCAGGTAATGCTTCGAGTGGGAGATCTTGATCATGCTATCAATTTCTATGAGAAGGCATTTGGCATGGAACTTCTCCGGAAACGAGACAATCCCCAATACAAGTATACTATTGCAATGATGGGATATGGTCCTGAAGACAAAAATGCTGTACTGGAGTTGACCTACAACTATGGTGTCAAGGAATATGATAAAGGAAATGCTTATGCACAGATTGCTATTAGCACAGATGATGTCTACAAGACTGCGGAAGTCATTAGACAAAATGGTGGACAAATAACTCGTGAACCTGGCCCATTACCTGGAATTAATACGAAGATAACTGCTTGCACAGATCCAGATGGCTGGAAAACAGTATTTGTTGATAATGTAGATTTTCTCAAGGAGTTGGAAGAATGAGTTTTTGCCAATGATCTCATCTTGGTACAGGATTCAGAGGTTTTTCCCCTTGATTTGACATCTTGCGCCCTTGAAATCTTGTAAAAGCCACACCACCTCGAACTGAGGTTTGTAGATAGGCCATGCAAATCTACCATTCCACAGTTGGTAGTTTAATAGAGCATTAGATTACAACATTCCAAGCGATGTAGATGCGCAATCCATTTTGTTAGCGAAGTCAAATCATATGTACAAATTTTG-TTTTCCGGGTCAGAACTATTGTTCTTAATCAATCCATTTTACATTCGAAAGTTAGCATTCCTGCTGTAGGACTTCTTGTCATTTGTATTCTATGTCATGGAATATGAATGAATGGTGGTAAGTATGGAATCAGCGAGTGAGGAGCACAAACGCTGAGAACTGAAAAGTCTTTTGTGCTTTATCCATGGGCGCCCTGGAAGAAAGGAGAGAAAGGTTACATGTGATCTTTTACGTTGATATGGTGCCCATTTGACATGGAGCGAGATGGCGACAGTGTTCATCACTGTTAACATATGAAGGCATATTATATAGCAAAAGATTCTATGAATACCAGCGTCAGTGTAAGTTGAGTTTGACCTAGTTTTATTGACAATAATATTGGCAAAGTTGTACTTTCATCCAGATTTGTATAATTGTATGCATGGTTTTGGGACATTTTGTTTAAAAAAAAAAAAAAAAAACAAAGTCATGCCGTTACGTAGCGTATCGTGACAG] [+] EMBL CB665649 [CCCCCCAAATCCCCCTCCTCCTCCGCCACCGCCATGGCTCGCCTCCTCCTCCCCCTCCCCATCGCCGCCGCCGCCGCCTCCCGCCTCCGCCTCCCCGTCCTCTCCTCCTCCGTGGCGCGGCGTGAGGCGCTGCTCTTCGGGGGGAGGGTGGCGGCGGCGAGGGCGCCGGTGAGGCTGGCGAGGAGAGGGGTGAGCGCCGGGGCGGAGGCGGGCGGGTCGTCGTCGGCCGCCGCGGCAGCGCAGGTGATCGGGCAGGACGAGGCGGTGGAGTGGGTCAAGAAGGACCGGAGGCGCATGCTCCATGTCGTCTACCGCGTCGGCGACCTCGACAAGACGATCAAGTTTTACACCGAGTGCTTGGGGATGAAGCTGTTGCGCAAGCGCGACATTCCGGAGGAGAGGTATACCAATGCTTTTCTCGGGTACGGGCCTGAGGACTCGCATTTTGTTGTGGAGCTCACTTACAATTATGGTGTGGAAAGTTATGATATCGGGACTGCTTTCGGTCACTTCGGGATTGCTGTCGAGGACGTTGCAAAAACAGTAGATCTCATTAAAGCCAAGGGAGGAACGGTAACAAGAGAACCAGGACCTGTAAAAGGTGGAAAGTCTGAAATTGCTTTTATTGAAGATCCTGATGGTTACAAATTTGAGCTTATAGAAAGAGGTCCTACACCTGAGCCTTTATGCCAGGTAATGCTTCGAGTGGGAGATCTTGATCATGCTATCAATTTCTATGAGAAGGCATTTGGCATGGAACTTCTCCG ] [+] EMBL CB656607 [ GCGCCGCTTAGGCTGGCGAGGAGAGGGGTGAGCGCCGGGGCGGAGGCGGGCGGGTCGTCGTCGGCCGCCGCGGCAGCGCAGGTGATCGGGCAGGACGAGGCGGTGGAGTGGGTCAAGAAGGACCGGAGGCGCATGCTCCATGTCGTCTACCGCGTCGGCGACCTCGACAAGACGATCAAGTTTTACACCGAGTGCTTGGGGATGAAGCTGTTGCGCAAGCGCGACATTCCGGAGGAGAGGTATACCAATGCTTTTCTCGGGTACGGGCCTGAGGACTCGCATTTTGTTGTGGAGCTCACTTACAATTATGGTGTGGAAAGTTATGATATCGGGACTGCTTTCGGTCACTTCGGGATTGCTGTCGAGGACGTTGCAAAAACAGTAGATCTCATTAAAGCCAAGGGAGGAACGGTAACAAGAGAACCAGGACCTGTAAAAGGTGGAAAGTCTGTAATTGCTTTTATTGAAGATCCTGATGGTTACAAATTTGAGCTTATAGAAAGAGGTCCTACACCTGAGCCTTTATGCCAGGTAATGCTTCGAGTGGGAGATCTTGATCATGCTATCAATTTCTATGAGAAGGCATTTGGCATGGAACTTCTCCGGAAACGAGACAATCCCCAATACAAGTATACTATTGCAATGATGGGATATGGTCCTGAAGACAAAAATGCTGTACTGGAGTTGACCTACAACTATGGTGTNCAGGAATATGATAAAGGAAATGCTTATGCACAGATTGCTATTAGCACAGATGATGTCTACAAGACTGCGGAAGTCATTAGACAA ] [+] EMBL CB660678 [ ctctctctcCGCCGGTGAGGCTGGCGAGCAGTGGGGTGAGCGCCGGGGCGGAGGCGGGCGGGTCGTCCCCTGCCGCCGCGGCAGCGCAGGTGATCGGGCAGGACGAGGCGGTGGAGTGGGTCAAGAAGGACCGGAGGCGCATGCTCCATGTCGTCTACCGCGTCGGCGACCTCGACAAGACGATCAAGTTTTACACCGAGTGCTTGGGGATGAAGCTGTTGCGCAAGCGCGACATTCCGGAGGAGAGGTATACCAATGCTTTTCTCGGGTACGGGCCTGAGGACTCGCATTTTGTTGTGGAGCTCACTTACAATTATGGTGTGGAAAGTTATGATATCGGGACTGCTTTCGGTCACTTCGGGATTGCTGTCGAGGACGTTGCAAAAACAGTAGATCTCATTAAAGCCAAGGGAGGAACGGTAACAAGAGAACCAGGACCTGTAAAAGGTGGAAAGTCTGTAATTGCTTTTATTGAAGATCCTGATGGTTACAAATTTGAGCTTATAGAAAGAGGTCCTACACCTGAGCCTTTATGCCAGGTAATGCTTCGAGTGGGAGATCTTGATCATGCTATCAATTTCTATGAGAAGGCATTTGGCATGGAACTTCTCCGGAAACGAGACAATCCCCAATACAAGTATACTATTGCAATGATGGGATATGGTCCTGAAGACAAAAATGCTGTACTGGAGTTGACCTACAACTATGGTGTCAAGGAATATGATAAAGGAAATGCTTATGCACAGATTGCTATTAGCACAGATGATGTCTACAAGACTGCGGAAGTCATTAGACAAAATGGTGGACAAATAACTCGTGAACCT ] [+] EMBL AK067996 [ TCGTCGGCCGCCGCGGCAGCGCAGGTGATCGGGCAGGACGAGGCGGTGGAGTGGGTCAAGAAGGACCGGAGGCGCATGCTCCATGTCGTCTACCGCGTCGGCGACCTCGACAAGACGATCAAGTTTTACACCGAGTGCTTGGGGATGAAGCTGTTGCGCAAGCGCGACATTCCGGAGGAGAGGTATACCAATGCTTTTCTCGGGTACGGGCCTGAGGACTCGCATTTTGTTGTGGAGCTCACTTACAATTATGGTGTGGAAAGTTATGATATCGGGACTGCTTTCGGTCACTTCGGGATTGCTGTCGAGGACGTTGCAAAAACAGTAGATCTCATTAAAGCCAAGGGAGGAACGGTAACAAGAGAACCAGGACCTGTAAAAGGTGGAAAGTCTGTAATTGCTTTTATTGAAGATCCTGATGGTTACAAATTTGAGCTTATAGAAAGAGGTCCTACACCTGAGCCTTTATGCCAGGTAATGCTTCGAGTGGGAGATCTTGATCATGCTATCAATTTCTATGAGAAGGCATTTGGCATGGAACTTCTCCGGAAACGAGACAATCCCCAATACAAGTATACTATTGCAATGATGGGATATGGTCCTGAAGACAAAAATGCTGTACTGGAGTTGACCTACAACTATGGTGTCAAGGAATATGATAAAGGAAATGCTTATGCACAGATTGCTATTAGCACAGATGATGTCTACAAGACTGCGGAAGTCATTAGACAAAATGGTGGACAAATAACTCGTGAACCTGGCCCATTACCTGGAATTAATACGAAGATAACTGCTTGCACAGATCCAGATGGCTGGAAAACAGTATTTGTTGATAATGTAGATTTTCTCAAGGAGTTGGAAGAATGAGTTTTTGCCAATGATCTCATCTTGGTACAGGATTCAGAGGTTTTTCCCCTTGATTTGACATCTTGCGCCCTTGAAATCTTGTAAAAGCCACACCACCTCGAACTGAGGTTTGTAGATAGGCCATGCAAATCTACCATTCCACAGTTGGTAGTTTAATAGAGCATTAGATTACAACATTCCAAGCGATGTAGATGCGCAATCCATTTTGTTAGCGAAGTCAAATCATATGTACAAATTTTG TTTTCCCGGTCAGAACTATTGTTCTTAATCAATCCATTTTACATTCGAAAGTTAGCATTCCTGCTGTAGGACTTCTTGTCATTTGTATTCTATGTCATGGAATATGAATGAATGGTGGTAA ] [+] EMBL BE530940 [ gcCCGCCGCGGCGGCGCAGGTGATCGGGCAGGACGAGGCGGTGGAGTGGGTCAAGAAGGACCGGAGGCGCATGCTCCATGTCGTCTACCGCGTCGGCGACCTCGACAAGACGATCAAGTTTTACACCGAGTGCTTGGGGATGAAGCTGTTGCGCAAGCGCGACATTCCGGAGGAGAGGTATACCAATGCTTTTCTCGGGTACNGGCCTGAGGACTCGCATTTTGTTGTGGAGCTCACTTACAATTATGGTGTGGAAAGTTATGATATCGGGACTGCTTTCGGTCACTTCNGGATTGCTGTCGAGGACGTTGCAAAAACANTAGATCTCATTAAAGCCAAGGGAGGAACGGT NCAAGAG ACCACGACCTGTTAAANGNGGAAAGTCTGTAATTGCTTTTATTGAAGATCCTGATGGTTAC ] [-] EMBL CB660677 [ AAAAACAGTAGATCTCATTAAAGCCAAGGGAGGAACGGTAACAAGAGAACCAGGACCTGTAAAAGGTGGAAAGTCTGTAATTGCTTTTATTGAAGATCCTGATGGTTACAAATTTGAGCTTATAGAAAGAGGTCCTACACCTGAGCCTTTATGCCAGGTAATGCTTCGAGTGGGAGATCTTGATCATGCTATCAATTTCTATGAGAAGGCATTTGGCATGGAACTTCTCCGGAAACGAGACAATCCCCAATACAAGTATACTATTGCAATGATGGGATATGGTCCTGAAGACAAAAATGCTGTACTGGAGTTGACCTACAACTATGGTGTCAAGGAATATGATAAAGGAAATGCTTATGCACAGATTGCTATTAGCACAGATGATGTCTACAAGACTGCGGAAGTCATTAGACAAAATGGTGGACAAATAACTCGTGAACCTGGCCCATTACCTGGAATTAATACGAAGATAACTGCTTGCACAGATCCAGATGGCTGGAAAACAGTATTTGTTGATAATGTAGATTTTCTCAAGGAGTTGGAAGAATGAGTTTTTGCCAATGATCTCATCTTGGTACAGGATTCAGAGGTTTTTCCCCTTGATTTGACATCTTGCGCCCTTGAAATCTTGTAAAAGCCACACCACCTCGAACTGAGGTTTGTAGATAGGCCATGCAAATCTACCATTCCACAGTTGGTAGTTTAATAGAGCATTAGATTACAACATTCCAAGCGATGTAGATGCGCAATCCATTTTGTTAGCGAAGTCAAATCATATGTACAAATTTTG TTTTCCGGGTCAGAACTATTGTTCTTAATCAATCCATTTTACAT ] [+] EMBL CA766313 [ AACAAGAGAACC GGACCTGTAAAAGGTGGAAAGTCTGTAATTGCTTTTATTGAAGATCCAGATGGTTACAAATTTGAGCTTATAGAAAGAGGTCCTACACCTGAGCCTTTATGCCAGGTAATGCTTCGAGTGGGAGATCTTGATCATGCTATCAATTTCTATGAGAAGGCATTTGGCATGGAACTTCTCCGGAAACGAGACAATCCCCAATACAAGTATACTATTGCAATGATGGGATATGGTCCTGAAGACAAAAATGCTGTACTGGAGTTGACCTACAACTATGGTGTCAAGGAATATGATAAAGGAAATGCTTATGCACAGATTGCTATTAGCACAGATGATGTCTACAAGACTGCGGAAGTCATTAGACAAAATGGTGGACAAATAACTCGTGAACCTGGCCCATTACCTGGAATTAATACGAAGATAACTGCTTGCACAGATCCAGATGGCTGGAAAACAGTATTTGTTGATAATGTAGATTTCCTCAAGGAGTTGGAAGAATGAGTTTTTGCCAATGATCTCATCTTGGTACATGATTCAGAGGTTTTTCCCCTTGATTTGACATCTTGCGCCCTTGAAATCTTGTAAAAGCCACACCACCTCGAACTGAGGTTTGTAGATAGGCCATGCAAATCTACCATTCCACAGTTGGTAGTTTAATAGAGCATTAGATTACAACATTCCAAGCGATGTAGATGCGCAATCCATTTTGTTAGCGAAGTCAAATCATATGTACAAATTTTGTTTTTCCGGGTCAGAACTATTGgt ] [-] EMBL CB654005 [ CTTTATGCCAGGTAATGCTTCGAGTGGGAGATCTTGATCATGCTATCAATTTCTATGAGAAGGCATTTGGCATGGAACTTCTCCGGAAACGAGACAATCCCCAATACAAGTATACTATTGCAATGATGGGATATGGTCCTGAAGACAAAAATGCTGTACTGGAGTTGACCTACAACTATGGTGTCAAGGAATATGATAAAGGAAATGCTTATGCACAGATTGCTATTAGCACAGATGATGTCTACAAGACTGCGGAAGTCATTAGACAAAATGGTGGACAAATAACTCGTGAACCTGGCCCATTACCTGGAATTAATACGAAGATAACTGCTTGCACAGATCCAGATGGCTGGAAAACAGTATTTGTTGATAATGTAGATTTTCTCAAGGAGTTGGAAGAATGAGTTTTTGCCAATGATCTCATCTTGGTACAGGATTCAGAGGTTTTTCCCCTTGATTTGACATCTTGCGCCCTTGAAATCTTGTAAAAGCCACACCACCTCGAACTGAGGTTTGTAGATAGGCCATGCAAATCTACCATTCCACAGTTGGTAGTTTAATAGAGCATTAGATTACAACATTCCAAGGGATGTAGATGCGCAATCCATTTTGTTAGGGAAGTCAAATCATATGTACAAATTTTG TTTTCCGGGTCAGAAAGGTTGTTATTAATC ] [+] EMBL AA751971 [ ttngcaagAGGAAATGCTTGTNCCCAGATTGATATTAGCNNAGATGATGTCTACAAGACTGCGGAAGTCATTAGACCAAATGGTGGACAAATAACTCGTGAACCTGGCCCATTACCTGGAATTAATACGAAGATAACTGCTTGCACAGATCCAGATGGCTGGAAAACAGTATTTGTTGATAATGTANATTTCCTCAAGGAGTTGGAAGAATGAGTTTTTGCCAATGATCTCATCTTGGTACATGATTCAGAGGTTTTTCCCCTTGATTTGACATCTTGCGCCCTTGAAATCTTGTNNNNTCCNCACCACCTCGAACTGAGGTTTGTAGATAGGCCATGCAAATCTACCATTCCACAGTTGGTAGTTTAATAGAGCATTAGATTACAACATTCCAAGCGATGTNGATGCGCAATCCATTTTGTTAGCGAAGTCAAATCATATGTNCAAATTTTG TTTTCCGGGTCAGAACTATTGTTCTTAAT ] [-] EMBL CB665650 [ GAAGATAACTGCTTGCACAGATCCAGATGGCTGGAAAACAGTATTTGTTGATAATGTAGATTTTCTCAAGGAGTTGGAAGAATGAGTTTTTGCCAATGATCTCATCTTGGTACAGGATTCAGAGGTTTTTCCCCTTGATTTGACATCTTGCGCCCTTGAAATCTTGTAAAAGCCACACCACCTCGAACTGAGGTTTGTAGATAGGCCATGCAAATCTACCATTCCACAGTTGGTAGTTTAATAGAGCATTAGATTACAACATTCCAAGCGATGTAGATGCGCAATCCATTTTGTTAGCGAAGTCAAATCATATGTACAAATTTTG TTTTCCGGGTCAGAACTATTGTTCTTAATCAATCCATTTTACATTCGAAAGTTAGCATTCCTGCTGTAGGACTTCTTGTCATTTGTATTCTATGTCATGGAATATGAATGAATGGTGGTAAGTATGGAATCAGCGAGTGAGGAGCACAAACGCTGAGAACTGAAAAGTCTTTTGTGCTTTATCCATGGGCGCCCTGGAAGAAAGGAGAGAAAGGTTACATGTGATCTTTTACGTTGATATGGTGCCCATTTGACATGGAGCGAGATGGCGACAGTGTTCATCACTGTTAACATATGAAGGCATATTATATAGCAAAAGATTCTATGAATACCAGCGTCAGTGTAAGTTGAGTTTGACCTAGTTTTATTGACAATAATATTGGCAAAGTTGTACTTTCATCCAGATTTGTATAATTGTATGCATGGTTTTGGGACATTTTGTT ] [-] EMBL CA762098 [ CCCCTTGATTTGACATCTTGCGCCCTTGAAATCTTGTAAAAGCCACACCACCTCGAACTGAGGTTTGTAGATAGGCCATGCAAATCTACCATTCCACAGTTGGTAGTTTAATAGAGCATTAGATTACAACATTCCAAGCGATGTAGATGCGCAATCCATTTTGTTAGCGAAGTCAAATCATATGTACAAATTTTG TTTTCCGGGTCAGAACTATTGTTCTTAATCAAaaaaaaaaa ] [+] EMBL CF330282 [ CACAGTTGGTAGTTTAATAGAGCATTAGATTACAACATTCCAAGCGATGTAGATGCGCAATCCATTTTGTTAGCGAAGTCGAATCATATGTACAAATTTTG TTTTCCGGGTCAGAACTATTGTTCTTAATCAATCCATTGGACATTCGAAAGTTGGCATTCCTGCTGTAGGACTTCTTGTCATTGGTATGCTATGTCATGGAATATGAATGAATGGTGGTAAGTATGGAATCAGCGAGTGAGGAGCACAAACGCTGAGAACTGAAAAGTCTTTTGTGCTTTATCCATGGGCGCCCTGGAACAAAGGAGAGAAAGGTTACATGGGATCTTTTACGTTGAGAGGGGGCCCATTTGACATGGAGCGAGATGGCGACAGc ] [-] EMBL CF330283 [ GTAGTTTAATAGAGCATTAGATTACAACATTCCAAGCGATGTAGATGCGCAATCCATTTTGTTAGCGAAGTCGAATCATATGTACAAATTTTG TTTTCCGGGTCAGAACTATTGTTCTTAATCAATCCATTTTACATTCGAAAGTTGGCATTCCTGCTGTAGGACTTCTTGTCATTTGTATTCTATGTCATGGAATATGAATGAATGGTGGTAAGTATGGAATCAGCGAGTGAGGAGCACAAACGCTGAGAACTGAAAAGTCTTTTGTGCTTTATCCATGGGCGCCCTGGAAGAAAGGAGAGAAAGGTTACATGTGATCTTTTACGTTGATATGGTGCCCATTTGACATGGAGCGAGATGGCGACAGTGTTCATCACTGTTAACATATGAAGGCATATTATATAGCAAAAGATTCTATGAATACCAGCGTCAGTGTAAGTTGAGTTTGACCTAGTTTTATTGACAATAATATTGGCAAAGTTGTACTTTCATCCAGATTTGTATAATTGTATGCATGGTTTTGGGACATTTTGTTTAAAAAAAAAAAAAAAAAACAAAGTCATGCCGTTACGTAGCGTATCGTGACAG] consensusID : consensus_14177#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 812 fasta sequence [GGGGGATCTTAGAATAATAATACTCCTAAGTACATTTGTCAGAAAAAAAGTATATGCATATGCATTATTAGTTTGTTGCATTACATATTTTGTGCCNTGCCTCTATTTTCATGAAGAACCCGCAGTTTCTTCCGTCTGATACATTAATTACCATAATTGCAGGTATTTGTTGATAATGTAGATTTCCTCAAGGAGTTGGAAGAATGAGTTTTTGCCAATGATCTCATCGTGGTACATGATTCAGAGGTTTTTCCCCTTGATTTGACATCTTGCGCCCTTGAAATCTTGTAAAAGCCACACCACCTCGAACTGAGGTTTGTAGATAGGCCATGCAAATCTACCATTCCACAGTTGGTAGTTTAATAGAGCATTAGATTACAACATTCCAAGCGATGTAGATGCGCAATCCATTTTGTTAGCGAAGTCAAATCATATGTACAAATTTTGTTTTCCGGGTCAGAACTATTGNTCTTAATCAATCCATTTTACATTCGAAAGTTAGCATTCCTGCTGTAGGACTTCTTGTCATTTGTATTCTATGTCATGGAATATGAATGAATGGTGCTAAGTATGGAATCAGCGAGTGAGGAGCACAAACGCTGAGAACTGAAAGTCTTTTGTGCTTTATCCATGGGCGCCCTGGAAGAAAGGAGAGAAAGGTTACACTTTTTGTCAATCAACAGTCAGAAATTTCTAGTTTTCACTATGGGTAAATCAGATTGATGCCACATGTGATCTTTTACGTTGATATGGTGCCCATTTGACATGGGAGCGAGATGGCGACAGNGGTCATCACTGGTNACATATGAAGG] [+] EMBL CB096776 [GGGGGATCTTAGAATAATAATACTCCTAAGTACATTTGTCAGAAAAAAAGTATATGCATATGCATTATTAGTTTGTTGCATTACATATTTTGTGCCNTGCCTCTATTTTCATGAAGAACCCGCAGTTTCTTCCGTCTGATACATTAATTACCATAATTGCAGGTATTTGTTGATAATGTAGATTTCCTCAAGGAGTTGGAAGAATGAGTTTTTGCCAATGATCTCATCGTGGTACATGATTCAGAGGTTTTTCCCCTTGATTTGACATCTTGCGCCCTTGAAATCTTGTAAAAGCCACACCACCTCGAACTGAGGTTTGTAGATAGGCCATGCAAATCTACCATTCCACAGTTGGTAGTTTAATAGAGCATTAGATTACAACATTCCAAGCGATGTAGATGCGCAATCCATTTTGTTAGCGAAGTCAAATCATATGTACAAATTTTGTTTTCCGGGTCAGAACTATTGNTCTTAATCAATCCATTTTACATTCGAAAGTTAGCATTCCTGCTGTAGGACTTCTTGTCATTTGTATTCTATGTCATGGAATATGAATGAATGGTGCTAAGTATGGAATCAGCGAGTGAGGAGCACAAACGCTGAGAACTGAAAGTCTTTTGTGCTTTATCCATGGGCGCCCTGGAAGAAAGGAGAGAAAGGTTACACTTTTTGTCAATCAACAGTCAGAAATTTCTAGTTTTCACTATGGGTAAATCAGATTGATGCCACATGTGATCTTTTACGTTGATATGGTGCCCATTTGACATGGGAGCGAGATGGCGACAGNGGTCATCACTGGTNACATATGAAGG] consensusID : consensus_14177#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 682 fasta sequence [TCTGCTATCAATTTCTATGAGAAGGCATTTGGCATGGAACTTCTCCGGAAACGAGACAATCCCCAATACAAGGTTGGTACTTTTCGAAACCATTGCATGGATTTACCTCGTGACACTCATGGCTTCTGTTTGCCCTGATGCTTTCTAATGTTATGCTCTACTACAAAGTACTAGACAAACATTCAAAAGAGCTTCCATCAATGTACCTCATCACCTCCATTGCTATGACTTCTGTTTGTCCTCATGGCTTCTGTTTGCCCTGATGCTTTCTAATCTGATCCTTGCTTAAGTGAGATAAGGAAAAACATGCACTACTACCTCGAAATATGAGAACATGTTAAATGCACTTTTTGTTTGTAAACTATTTGCTTAGTTCCATATCTTATACAGTGGTATCCTGACTTACGGAGAACATGTTAAATGTAGCTATTATGGTTGTATCCTGATTTTTGCTACATTCATACACTGGGTTCAGACTTCAGACTTGGGTAGTAGGCATGGTATTGATAAAACCGAAGTGATAGCAAGTTCCGCATGTGCATTTACTGGTTGTTTCATTATACATGCCATTGGTTCTTATATTTCTTTCTAGAGATGGGAACTTCGTTGNTTTTAGGCATCATTTTTCTGGNGNTGACAAGCCTTTTTCTTTTCTTTTTGAAATCTTANTCTCAAGCATGTT] [+] EMBL CB096556 [TCTGCTATCAATTTCTATGAGAAGGCATTTGGCATGGAACTTCTCCGGAAACGAGACAATCCCCAATACAAGGTTGGTACTTTTCGAAACCATTGCATGGATTTACCTCGTGACACTCATGGCTTCTGTTTGCCCTGATGCTTTCTAATGTTATGCTCTACTACAAAGTACTAGACAAACATTCAAAAGAGCTTCCATCAATGTACCTCATCACCTCCATTGCTATGACTTCTGTTTGTCCTCATGGCTTCTGTTTGCCCTGATGCTTTCTAATCTGATCCTTGCTTAAGTGAGATAAGGAAAAACATGCACTACTACCTCGAAATATGAGAACATGTTAAATGCACTTTTTGTTTGTAAACTATTTGCTTAGTTCCATATCTTATACAGTGGTATCCTGACTTACGGAGAACATGTTAAATGTAGCTATTATGGTTGTATCCTGATTTTTGCTACATTCATACACTGGGTTCAGACTTCAGACTTGGGTAGTAGGCATGGTATTGATAAAACCGAAGTGATAGCAAGTTCCGCATGTGCATTTACTGGTTGTTTCATTATACATGCCATTGGTTCTTATATTTCTTTCTAGAGATGGGAACTTCGTTGNTTTTAGGCATCATTTTTCTGGNGNTGACAAGCCTTTTTCTTTTCTTTTTGAAATCTTANTCTCAAGCATGTT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_14177#0 CCCCCCAAATCCCCCTCCTCCTCCGCCACCGCCATGGCTCGCCTCCTCCTCCCCCTCCCC 60 consensus_14177#1 ------------------------------------------------------------ consensus_14177#2 ------------------------------------------------------------ consensus_14177#0 ATCGCCGCCGCCGCCGCCTCCCGCCTCCGCCTCCCCGTCCTCTCCTCCTCCGTGGCGCGG 120 consensus_14177#1 ------------------------------------------------------------ consensus_14177#2 ------------------------------------------------------------ consensus_14177#0 CGTGAGGCGCTGCTCTTCGGGGGGAGGGTGGCGGCGGCGAGGGCGCCGGTGAGGCTGGCG 180 consensus_14177#1 ------------------------------------------------------------ consensus_14177#2 ------------------------------------------------------------ consensus_14177#0 AGGAGAGGGGTGAGCGCCGGGGCGGAGGCGGGCGGGTCGTCGTCGGCCGCCGCGGCAGCG 240 consensus_14177#1 ------------------------------------------------------------ consensus_14177#2 ------------------------------------------------------------ consensus_14177#0 CAGGTGATCGGGCAGGACGAGGCGGTGGAGTGGGTCAAGAAGGACCGGAGGCGCATGCTC 300 consensus_14177#1 ------------------------------------------------------------ consensus_14177#2 ------------------------------------------------------------ consensus_14177#0 CATGTCGTCTACCGCGTCGGCGACCTCGACAAGACGATCAAGTTTTACACCGAGTGCTTG 360 consensus_14177#1 ------------------------------------------------------------ consensus_14177#2 ------------------------------------------------------------ consensus_14177#0 GGGATGAAGCTGTTGCGCAAGCGCGACATTCCGGAGGAGAGGTATACCAATGCTTTTCTC 420 consensus_14177#1 ------------------------------------------------------------ consensus_14177#2 ------------------------------------------------------------ consensus_14177#0 GGGTACGGGCCTGAGGACTCGCATTTTGTTGTGGAGCTCACTTACAATTATGGTGTGGAA 480 consensus_14177#1 ------------------------------------------------------------ consensus_14177#2 ------------------------------------------------------------ consensus_14177#0 AGTTATGATATCGGGACTGCTTTCGGTCACTTCGGGATTGCTGTCGAGGACGTTGCAAAA 540 consensus_14177#1 ------------------------------------------------------------ consensus_14177#2 ------------------------------------------------------------ consensus_14177#0 ACAGTAGATCTCATTAAAGCCAAGGGAGGAACGGTAACAAGAGAACCAGGACCTGTAAAA 600 consensus_14177#1 ------------------------------------------------------------ consensus_14177#2 ------------------------------------------------------------ consensus_14177#0 GGTGGAAAGTCTGTAATTGCTTTTATTGAAGATCCTGATGGTTACAAATTTGAGCTTATA 660 consensus_14177#1 ------------------------------------------------------------ consensus_14177#2 ------------------------------------------------------------ consensus_14177#0 GAAAGAGGTCCTACACCTGAGCCTTTATGCCAGGTAATGCTTCGAGTGGGAGATCTTGAT 720 consensus_14177#1 ------------------------------------------------------------ consensus_14177#2 ------------------------------------------------------------ consensus_14177#0 CATGCTATCAATTTCTATGAGAAGGCATTTGGCATGGAACTTCTCCGGAAACGAGACAAT 780 consensus_14177#1 ------------------------------------------------------------ consensus_14177#2 TCTGCTATCAATTTCTATGAGAAGGCATTTGGCATGGAACTTCTCCGGAAACGAGACAAT 60 consensus_14177#0 CCCCAATACAAGTATACTATTGCAATGATGGGATATGGTCCTGAAGACAAAAATGCTGTA 840 consensus_14177#1 ------------------------------------------------------------ consensus_14177#2 CCCCAATACAAGGTTGGTACTTTTCGAAACCATTGCATGGATTTACCTCGTGACACTC-- 118 consensus_14177#0 CTGGAGTTGACCTACAACTATGGTGTCAAGGAATATGATAAAGGAAATGCTTATGCACAG 900 consensus_14177#1 ---------------------------GGGGGATCTTAGAATAATAATACTCCTAAGTAC 33 consensus_14177#2 ATGGCTTCTGTTTGCCCTGATGCTTTCTAATGTTATGCTCTACTACAAAGTACTAGACAA 178 * * * * * * consensus_14177#0 ATTGCTATTAGCACAGATGATGTCTACAAGACTGCGGAAGTCATTAGACAAAATGGTGGA 960 consensus_14177#1 ATT-----TGTCAGAAAAAAAGTATATGCATATGCA----TTATTAGTT----TGTTGCA 80 consensus_14177#2 AC-------ATTCAAAAGAGCTTCCATCAATGTACC----TCATCACCTCCATTGCT--- 224 * * * * * * * * ** * ** * consensus_14177#0 CAA-ATAACTCGTGAACCTGGCCCATTACCTGGAATTAATACGAAGATAACTG--CTTGC 1017 consensus_14177#1 TTACATATTTTGTGCCNTGCCTCTATTTTCATGAAG-AACCCGCAGTTTCTTC--CGTCT 137 consensus_14177#2 ----ATGACTTCTGT-TTGTCCTCATGGCTTCTGTTTGCCCTGATGCTTTCTAATCTGAT 279 ** * ** ** * * * * * consensus_14177#0 ACAGATCCAGATGGCTGGAAAACAG-TATTTGTTGATAATGTAGATTTTCTCAAGGAGTT 1076 consensus_14177#1 GATACATTAATTACCATAATTGCAGGTATTTGTTGATAATGTAGATTTCCTCAAGGAGTT 197 consensus_14177#2 CCTTGCTTAAGTGAGATAAGGAAAAACATGCACTACTACCTCGAAATATGAGAACATGTT 339 * * * * ** * ** * * ** *** consensus_14177#0 GGAAGAATGAGTT-TTTGCCAATGAT---CTCATCTTGGTACAGGATTCAGAGGTTTTTC 1132 consensus_14177#1 GGAAGAATGAGTT-TTTGCCAATGAT---CTCATCGTGGTACATGATTCAGAGGTTTTTC 253 consensus_14177#2 AAATGCACTTTTTGTTTGTAAACTATTTGCTTAGTTCCATATCTTATACAGTGGTATCCT 399 * * * ** **** ** ** ** * ** ** *** *** * consensus_14177#0 CCCTTGATTTGACATCTTGCGCCCTTGAAATCTTGTAAAAGCCACACCACCTCGAACTGA 1192 consensus_14177#1 CCCTTGATTTGACATCTTGCGCCCTTGAAATCTTGTAAAAGCCACACCACCTCGAACTGA 313 consensus_14177#2 GACTTA--CGGAGAACATGTTAAATGTAGCTATTATGGTTGT-ATCCTGATTTTTGCT-A 455 *** ** * * ** * * * ** * * * * * ** * consensus_14177#0 GGTTTGTAGATAGGCCATGCAAATCTACCATTCCACAGTTGGTA--GT-TTAATAGAGCA 1249 consensus_14177#1 GGTTTGTAGATAGGCCATGCAAATCTACCATTCCACAGTTGGTA--GT-TTAATAGAGCA 370 consensus_14177#2 CATTCATACACTGGGT-TCAGACTTCAGACTTGGGTAGTAGGCATGGTATTGATAAAAC- 513 ** ** * ** * * * * ** *** ** * ** ** *** * * consensus_14177#0 TTAGATTACAACATTCCAAGCGATGTAGATGCGCAATCCATTTTGTTAGCGAAGTCAAAT 1309 consensus_14177#1 TTAGATTACAACATTCCAAGCGATGTAGATGCGCAATCCATTTTGTTAGCGAAGTCAAAT 430 consensus_14177#2 CGAAGTGATAGCAAGTTCCGC-ATGTGCATTTACTGGTTGTTTCATTATACATGCCA--- 569 * * * * ** ** **** ** * *** *** * * ** consensus_14177#0 CATATGTACAAATTTTGTTTTCCGGGTCAGAACT--ATTGTTCTTAATCAATCCATTTTA 1367 consensus_14177#1 CATATGTACAAATTTTGTTTTCCGGGTCAGAACT--ATTGNTCTTAATCAATCCATTTTA 488 consensus_14177#2 TTGGTTCTTATATTTCTTTCTAGAGATGGGAACTTCGTTGNTTTTAGGCA--TCATTTT- 626 * * **** ** * * * ***** *** * *** ** ****** consensus_14177#0 CATTCGAAAGTTAGCATTCCTGCTGTAGGACTTCTTGTCATTTGTATTCTATGTCATGGA 1427 consensus_14177#1 CATTCGAAAGTTAGCATTCCTGCTGTAGGACTTCTTGTCATTTGTATTCTATGTCATGGA 548 consensus_14177#2 ---TCTGGNGNTGACAAGCCTTTTTCTTTTCTTTTTGAAATCT-TANTCTCAAGCATGTT 682 ** * * ** *** * *** *** ** * ** *** **** consensus_14177#0 ATATGAATGAATGGTGGTAAGTATGGAATCAGCGAGTGAGGAGCACAAACGCTGAGAACT 1487 consensus_14177#1 ATATGAATGAATGGTGCTAAGTATGGAATCAGCGAGTGAGGAGCACAAACGCTGAGAACT 608 consensus_14177#2 ------------------------------------------------------------ consensus_14177#0 GAAAAGTCTTTTGTGCTTTATCCATGGGCGCCCTGGAAGAAAGGAGAGAAAGGTTACATG 1547 consensus_14177#1 GAAA-GTCTTTTGTGCTTTATCCATGGGCGCCCTGGAAGAAAGGAGAGAAAGGTTACAC- 666 consensus_14177#2 ------------------------------------------------------------ consensus_14177#0 TGATCTTTTACGTTGATATGGTGCCCATTTGACATGGAGCGAGATGGCGACAGTGTTCAT 1607 consensus_14177#1 ------TTTTTGTCAAT------------CAACA----GTCAGAAATTTCTAGTTTTCAC 704 consensus_14177#2 ------------------------------------------------------------ consensus_14177#0 CACTGTTAACATATGAAGGCATATTATATAGCAAAAGATTCTATGAATACCAGCGTCAGT 1667 consensus_14177#1 TATGGGTAA-ATCAGATTG-ATGCCACAT-GTGATCTTTTACGTTGATAT-GGTGCCCAT 760 consensus_14177#2 ------------------------------------------------------------ consensus_14177#0 GTAAGTTGAGTTTGACCTAGTTTTATTGACAATAATATTGGCAAAGT-TGTACTTTCATC 1726 consensus_14177#1 TTGACATGGGAGCGAGATGGCGACAGNGGTCAT--CACTGGTNACATATGAAGG------ 812 consensus_14177#2 ------------------------------------------------------------ consensus_14177#0 CAGATTTGTATAATTGTATGCATGGTTTTGGGACATTTTGTTTAAAAAAAAAAAAAAAAA 1786 consensus_14177#1 ------------------------------------------------------------ consensus_14177#2 ------------------------------------------------------------ consensus_14177#0 ACAAAGTCATGCCGTTACGTAGCGTATCGTGACAG 1821 consensus_14177#1 ----------------------------------- consensus_14177#2 ----------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||