cluster # 14185

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 14185 cluster # 14185 Sequences # 15 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_14185#0 length = 1929 sequences # 10

consensus_14185#1 length = 826 sequences # 5

consensusID : consensus_14185#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 1929
fasta sequence

                              [CTCCCCCCACTACTCCTTTCGTCTCCAACCCCTCGCCGCCGCCGCCACCCAAAACCCTACCCTTCCCCTCCCCGTATTCTAATGGCGCTGCAACCAATCCGGCACAGCTGCTAGCAATCGACTCCCATCATCCGCGCGCGTCGAGTAGCTCCGTGAACCTACCGCAGCCTCTCCTCTCTCTCTCTCTCCGGCGCCGCCCCCCCCCCCCCCCCCCCCCGCGTCTCGCCATGGCGACCCTCAACATGTTCGACATCCTCGGTGCGGACGACAACGACGACCCCTCGCAGCTGCTGGCCGCGGCCGCGGCCGCGGCGCAGAAGGCCGAGGCGAAGAAGGCCGCCGCCGCCGCGGCGGCGCCCGCTGGGAAGGCGGCCCAGGCCGCGTCGGCCGCCGCCAAGTTCCCCACCAAGCCCGCTCCCCCCACCCAGGCTGCGCGGGAGGCACGGGGTGGTGGTGCACCATCACGTGGAGGATTTGGCCGTGGTGAGCGTGGCCGTGGCAGAGGTGGACGGGGATATGGCCAGAACCGTGATTTTGGTGGAGACAATGCCAATGGCTACCAGGGTGGTTACGGTGGAGGCTATGGAGATGGGGCTGTTGCTGCTGGTGGAGAAGGTGACAGGGAGAGAGGCCCTCGAGCTCCATTCCATGGAGGTAGGCGTGGTGGCTACCGAAATGGTGAATATGGGGATGATTCTGAGAGGCCGCCCCGGAGAAATTATGAGCGCCACAGTGGTACTGGCCGTGGTTA-TGAGATGAAGCGTGATGGTGCAGGGCGTGGGAACTGGGGAACTGCTACTGATGAGGCTCTTGCACAGGAGACTGAGGAAGCCTTGAAGGTTGAGGAGAGTGCTCCTATTGCTGAGAAACAGGGTGAGCAGGATGATGCTCCAAC-TGGAGAGAAGGATAAC-AAGGA-GGGTGCTGCAAATGAGGAAGAAGAGAAGGAAGAGGATAAGGAGATGACTCTTGAGGAGTTTGAGAAATTAAGGGAGGAAAAGCGGAAAGCTCTTCTTGCTTTCAAGGCTGAAGAGAGGAAGGTTGAGGTCGATAAGGACCTGCAGTCTATGCAGCCACTTTCTACCAAGAAAGGAAATGATGAAATTTTCATTAAGCTGGGTTCTGACAAGGATAAGAAGAAGGAAAATGCTGAGCGCGATGAGCGTGCCAAGAAGTCTGTGAGCATCAATGAGTTCCTGAAGCCTGCGGAAGGAGAAAGGTACTATGGCGGCCGTGGTCGTGGAAGGGGGCGTGGAGATCGTGGCGGTCGTGGATATGGTGGTGGTTACCAACGTGGCCCATATTCTACATCTGCACCATCCATTGAAGATCAGGCTCAGTTCCCAACCCTTGGTGGGAAGCCGC-GTGCGTGAACGGTCTAA-GAGCATCGCAGCATTGTTTTTACTGGTGTCACCTTTAAATTTTGCCCGCAGTTGAATCATATTGTCACGGTTAATCGGAACAAATAATGGTGTTGCCTGTGCCTTTTTTCCATCGTGTGTTGGTCTACTTTGTATACCGGAGTTGCTTGTCAGAATTAGCCTCTAATTTTGTAGGCTAGCTTTTACCATTTTGTTAAAAATCTGCATTCCTTGCATGTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANAAAAANNNNNNANANAAAAAAAAAAACCAAANNNNAACCTTTGGGGGGGGGGCCGGGCCCCATTTCCCCTTAATAGGGGCCTTTTTACCCCCCCCAAATTGCCTGTGTTTAACAAAGTTGAGATGGGGAAAACCCTGGGCTTTCCCACTTAATCCGTTTTGAAAAAATCCCCTTTTCCACGTGTGGTTAAAAAAAAAAGAGGCCCCCCTGTCCCCTTTTCCAAAAATTGCACCCCTTAATGGGAAATGGGACCCCCCTTTAACGCCCTATAACCC]

[+] EMBL AK121001             [CTCCCCCCACTACTCCTTTCGTCTCCAACCCCTCGCCGCCGCCGCCACCCAAAACCCTACCCTTCCCCTCCCCGTATTCTAATGGCGCTGCAACCAATCCGGCACAGCTGCTAGCAATCGACTCCCATCATCCGCGCGCGTCGAGTAGCTCCGTGAACCTACCGCAGCCTCTCCTCTCTCTCTCTCTCCGGCGCCGCCCCCCCCCCCCCCCCCCCCCGCGTCTCGCCATGGCGACCCTCAACATGTTCGACATCCTCGGTGCGGACGACAACGACGACCCCTCGCAGCTGCTGGCCGCGGCCGCGGCCGCGGCGCAGAAGGCCGAGGCGAAGAAGGCCGCCGCCGCCGCGGCGGCGCCCGCTGGGAAGGCGGCCCAGGCCGCGTCGGCCGCCGCCAAGTTCCCCACCAAGCCCGCTCCCCCCACCCAGGCTGCGCGGGAGGCACGGGGTGGTGGTGCACCATCACGTGGAGGATTTGGCCGTGGTGAGCGTGGCCGTGGCAGAGGTGGACGGGGATATGGCCAGAACCGTGATTTTGGTGGAGACAATGCCAATGGCTACCAGGGTGGTTACGGTGGAGGCTATGGAGATGGGGCTGTTGCTGCTGGTGGAGAAGGTGACAGGGAGAGAGGCCCTCGAGCTCCATTCCATGGAGGTAGGCGTGGTGGCTACCGAAATGGTGAATATGGGGATGATTCTGAGAGGCCGCCCCGGAGAAATTATGAGCGCCACAGTGGTACTGGCCGTGGTTA TGAGATGAAGCGTGATGGTGCAGGGCGTGGGAACTGGGGAACTGCTACTGATGAGGCTCTTGCACAGGAGACTGAGGAAGCCTTGAAGGTTGAGGAGAGTGCTCCTATTGCTGAGAAACAGGGTGAGCAGGATGATGCTCCAAC TGGAGAGAAGGATAAC AAGGA GGGTGCTGCAAATGAGGAAGAAGAGAAGGAAGAGGATAAGGAGATGACTCTTGAGGAGTTTGAGAAATTAAGGGAGGAAAAGCGGAAAGCTCTTCTTGCTTTCAAGGCTGAAGAGAGGAAGGTTGAGGTCGATAAGGACCTGCAGTCTATGCAGCCACTTTCTACCAAGAAAGGAAATGATGAAATTTTCATTAAGCTGGGTTCTGACAAGGATAAGAAGAGGGAAAATGCTGAGCGCGATGAGCGTGCCAAGAAGTCTGTGAGCATCAATGAGTTCCTGAAGCCTGCGGAAGGAGAAAGGTACTATGGCGGCCGTGGTCGTGGAAGGGGGCGTGGAGATCGTGGCGGTCGTGGATATGGTGGTGGTTACCAACGTGGCCCATATTCTACATCTGCACCATCCATTGAAGATCAGGCTCAGTTCCCAACCCTTGGTGGGAAGCCGC GTGCGTGAACGGTCTAA GAGCATCGCAGCATTGTTTTTACTGGTGTCACCTTTAAATTTTGCCCGCAGTTGAATCATATTGTCACGGTTAATCGGAACAAATAATGGTGTTGCCTGTGCCTTTTTTCCATCGTGTGTTGGTCTACTTTGTATACCGGAGTTGCTTGTCAGAATTAGCCTCTAATTTTGTAGGCTAGCTTTTACCATTTTGTTAAAAATCTGCATTCCTTG                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL OSR3294A             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GAGCGTGGCCGTGGCAGAGGTGGACGGGGATATGGCCAGAACCGTGATTTTGGTGGAGACAATGCCAATGGCTACCAGGGTGGTTACGGTGGAGGCTATGGAGATGGGGCTGTTGCTGCTGGTGGAGAAGGTGACAGGGAGAGAGGCCCTCGAGCTCCATTCCATGGAGGTAGGCGTGGTGGCTACCGAAATGGTGAATATGGGGATGATTCTNAGAGGCCGCCCCGGAGAAATTATGAGCGCCACAGTGGTACTGGCCNTGGTTATTTTTATGAAGCGTGATGGTGCAGGGCGTGGGAACTGGGGAACTGCTACTGATGAGGCTCTTGCACAGGAGACTTAGGAAGCCTTNAAGGTTNAGGAGAGTTCTCCTATTTCTGAGAAACAGGGTNAGCAGGATGATGCTCCAACTTGGAGA AAAGNTAACAAAGGAGGGGTTCTTCAAATNAGGAAG AGANAAGGAAGAGG TAAAGNGATTACTCTTTAAGGGTTTa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CB619495             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TGCTACTGATGAGGCTCTTGCACAGGAGACTGAGGAAGCCTTGAAGGTTGAGGAGAGTGCTCCTATTGCTGAGAAACAGGGTGAGCAGGATGATGCTCCAAC TGGAGAGAAGGATAGC AAGGA GGGTGCTGCAAATGAGGAAGAAGAGAAGGAAGAGGATAAGGAGATGCCTCTTGAGGAGTTTGAGAAATTAAGGGAGGAAAAGCGGAAAGCTCTTCTTGCTTTCAAGGCTGAAGAGAGGAAGGTTGAGGTTGATAAGGACCTGCAGTCTATGCAGCCACTTTCTACCAAGAAAGGAAATGATGAAATTTTCATTAAGCTGGGTTCTGACAAGGATAAGAAGAAGGAAAATGCTGAGCGCGATGAGCGTGCCAAGAAGTCTGTGAGCATCAATGAGTTCCTGAAGCCTGCGGAAGGAGAAAGGTACTATGGCGGCCGTGGTCGTGGAAGGGGGCGTGGAGATCGTGGCGGTCGTGGATATGGTGGTGGTTACCAACGTGGCCCATATTTTACATCTGCACCATCCATTGAAGATCAGGCTCAGTTCCCAACCCTTGGTGGGAAGCCGC GTGCGTGAACGGTTTAA GAGCATCGCAGCATTGTTTTTACTGGTGTCACCTTTAAATTTTGCCCGCAGTTGAATCATATTGTCACGGTTAATCGGAACAAATAATGGTGTTGCCTGTGCCTTTTTTCCATGGTGTGTTGGTCTACTTTGTATCCCGGAGTTGCTTGTCAGAATTAGCCTCTAATTTTGTAGGCTAGCTTTTACCAGTTTGTTAAAAATCTGCATTC                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AK059581             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                AGGCTGAAGAGAGGAAGGTTGAGGTCGATAAGGACCTGCAGTCTATGCAGCCACTTTCTACCAAGAAAGGAAATGATGAAATTTTCATTAAGCTGGGTTCTGACAAGGATAAGAAGAAGGAAAATGCTGAGCGCGATGAGCGTGCCAAGAAGTCTGTGAGCATCAATGAGTTCCTGAAGCCTGCGGAAGGAGAAAGGTACTATGGCGGCCGTGGTCGTGGAAGGGGGCGTGGAGATCGTGGCGGTCGTGGATATGGTGGTGGTTACCAACGTGGCCCATATTCTACATCTGCACCATCCATTGAAGATCAGGCTCAGTTCCCAACCCTTGGTGGGAAGCCGC GTGCGTGAACGGTCTAA GAGCATCGCAGCATTGTTTTTACTGGTGTCACCTTTAAATTTTGCCCGCAGTTGAATCATATTGTCACGGTTAATCGGAACAAATAATGGTGTTGCCTGTGCCTTTTTTCCATCGTGTGTTGG                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL BI805637             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ACCTCCAGTCTAT CACCCACTTTCTACCAAGAAAGGAAATGATGAAATTTTCATTAA CTGGGTTCTGACAAGGATAAGAAGAAGGAAAATGCTGAGCGCGATGAGCGTGCC AGAAGTCTGTGAGCATC ATGAGTTCCTGAAGCCTGCGGAAGGAGAAAGGTACTAT GC GCCGTGGTCGTGGAAGGGGGCGTGGAGATCGTGGCGGTCGTGGATATGGTGGTGGTTACC ACGTGGCCCATATTCTACATCTGCACCATCCATTGAAGATCAGGCTCAGTTCCCAACCCTTGGTGGGAA CCGC GTGCGTGAACGGTCTAA GAGCATCGCAGCATTGTTTTTACTGGTGTCACCTTTAAATTTTGCCCGCAGTTGAATCATATTGTCACGGTTAATCGGAAC AATAATGGTGTTGCCTGTGCCTTTTTTCCATCGTGTGTTGGTCTACTTTGTATACCGGAGTTGCTTGTCAGAATTAGCCTCTAATTTTGTAGGCTAGCTTTTACCATTTTGTTAAAAATCTGCATTCCTTGC                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BE040212             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AAGTCTGTGAGCATCAATGAGTTCCTGAAGCCTGCGGAAGGAGAAAGGTACTATGGCGGCCGTGGTCGTGGAAGGGGGCGTGGAGATCGTGGCGGTCGTGGATATGGTGGTGGTTACCAACGTGGCCCATATTCTACATCTGCACCATCCATTGAAGATCAGGCTCAGTTCCCAACCCTTGGTGGGAAGCCGC GTGCGTGAACGGTCTAA GAGCATCGCAGCATTGTTTTTACTGGTGTCACCTTTAAATTTTGCCCGCAGTTGAATCATATTGTCACGGTTAATCGGAACAAATAATGGTGTTGCCTGTGCCTTTTTTCCATCGTGTGTTGGTCTACTTTGTATACCGGAGTTGCTTGTCAGAATTAGCCTCTAATTTTGTAGGCTAGCTTTTACCATTTTGTTAAAAATCTGCATTCCTTGCATGTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANAAAAANNNNNNANANAAAAAAAAAAACCAAANNNNAACCTTTGGGGGGGGGGCCGGGCCCCATTTCCCCTTAATAGGGGCCTTTTTACCCCCCCCAAATTGCCTGTGTTTAACAAAGTTGAGATGGGGAAAACCCTGGGCTTTCCCACTTAATCCGTTTTGAAAAAATCCCCTTTTCCACGTGTGGTTAAAAAAAAAAGAGGCCCCCCTGTCCCCTTTTCCAAAAATTGCACCCCTTAATGGGAAATGGGACCCCCCTTTAACGCCCTATAACCC]
[-] EMBL C28262               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GCATCAATGAGTCCCTTNAACCTGCGGAAGGANAAAGGTACTATGGCGGCCGTGGTCGTGGAAGGGGNCGTGGAGATCGTGGCGGTCGTGGATATGGTGGTGGTTACCAACGTGGCCCATATTCTACATCTGCACCATCCATTGAAGATCAGGCTCAGTTCCCAACCCTTGGTGGGAAGCCGC GTGCGTGAACGGTCTAA GAGCATCGCAGCATTGTTTTTACTGGTGTCACCTTTAAATTTTGCCCGCAGTTGAATCATATTGTCACGGTTAATCGGAACAAATAATGGTGTTGCCTGTGCCTTTTTTCCATCGTGTGTTGGTCTACTTTGTATACCGGAGTTGCTTGTCAGAATTAGCCTCTAATTTTGTAGGCTAGCTTTTACCATTTTGTTAAAAATCTGCATTCCTTGCAT                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL C26934               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ATCGTNGCGGTCGTGGATATGGTGGTGGTTACCAACGTGGCCCATATTCTACATCTGCACCATCCATTGAAGATCAGGCTCAGTTCCCAACCCTTGGTGGGAAGCCGC GTGCGTGAACGGTCTAA GAGCATCGCAGCATTGTTTTTACTGGTGTCACCTTTAAATTTTGCCCGCAGNTGAATCATATTGTCACGGTTAATCGGNACAAATAATGGTGTTGCCTGTGCCTTTTTTCCATCGTGTGTTGGTCTACTTT                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AU070561             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GGNAAGCCGCNGTGCGTGAACGGTCTAATGAGCATCGCAGCATTGTTTTTACTGGTGTCACCTTTAAATTTTGCCCGCAGTTGAATCATATTGTCACGGTTAATCGGAACAAATAATGGTGTTGCCTGTGCCTTTTTTCCATCGTGTGTTGGTCTACTTTGTATACCGGAGTTGCTTGTCAGAATTAGCCTCTAATTTTGTAGGCTAGCTTTTACCATTTTGTTAAAAATCTGCATTCCTTGCAaaaaa                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CA753512             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CACCTTTAAATTTTGCCCGCAGTTGAATCATATTGTCACGGTTAATCGGAACAAATAATGGTGTTGCCTGTGCCTTTTTTCCATCGTGTGTTGGTCTACTTTGTATACCGGAGTTGCTTGTCAGAATTAGCCTCTAATTTTGTAGGCTAGCTTTTACCATTTTGTTAAAAATCTGCATTCCTTGCATGTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA                                                                                                                                                                                                                                                                                             ]




>consensus_14185#0
CTCCCCCCACTACTCCTTTCGTCTCCAACCCCTCGCCGCCGCCGCCACCCAAAACCCTAC
CCTTCCCCTCCCCGTATTCTAATGGCGCTGCAACCAATCCGGCACAGCTGCTAGCAATCG
ACTCCCATCATCCGCGCGCGTCGAGTAGCTCCGTGAACCTACCGCAGCCTCTCCTCTCTC
TCTCTCTCCGGCGCCGCCCCCCCCCCCCCCCCCCCCCGCGTCTCGCCATGGCGACCCTCA
ACATGTTCGACATCCTCGGTGCGGACGACAACGACGACCCCTCGCAGCTGCTGGCCGCGG
CCGCGGCCGCGGCGCAGAAGGCCGAGGCGAAGAAGGCCGCCGCCGCCGCGGCGGCGCCCG
CTGGGAAGGCGGCCCAGGCCGCGTCGGCCGCCGCCAAGTTCCCCACCAAGCCCGCTCCCC
CCACCCAGGCTGCGCGGGAGGCACGGGGTGGTGGTGCACCATCACGTGGAGGATTTGGCC
GTGGTGAGCGTGGCCGTGGCAGAGGTGGACGGGGATATGGCCAGAACCGTGATTTTGGTG
GAGACAATGCCAATGGCTACCAGGGTGGTTACGGTGGAGGCTATGGAGATGGGGCTGTTG
CTGCTGGTGGAGAAGGTGACAGGGAGAGAGGCCCTCGAGCTCCATTCCATGGAGGTAGGC
GTGGTGGCTACCGAAATGGTGAATATGGGGATGATTCTGAGAGGCCGCCCCGGAGAAATT
ATGAGCGCCACAGTGGTACTGGCCGTGGTTATGAGATGAAGCGTGATGGTGCAGGGCGTG
GGAACTGGGGAACTGCTACTGATGAGGCTCTTGCACAGGAGACTGAGGAAGCCTTGAAGG
TTGAGGAGAGTGCTCCTATTGCTGAGAAACAGGGTGAGCAGGATGATGCTCCAACTGGAG
AGAAGGATAACAAGGAGGGTGCTGCAAATGAGGAAGAAGAGAAGGAAGAGGATAAGGAGA
TGACTCTTGAGGAGTTTGAGAAATTAAGGGAGGAAAAGCGGAAAGCTCTTCTTGCTTTCA
AGGCTGAAGAGAGGAAGGTTGAGGTCGATAAGGACCTGCAGTCTATGCAGCCACTTTCTA
CCAAGAAAGGAAATGATGAAATTTTCATTAAGCTGGGTTCTGACAAGGATAAGAAGAAGG
AAAATGCTGAGCGCGATGAGCGTGCCAAGAAGTCTGTGAGCATCAATGAGTTCCTGAAGC
CTGCGGAAGGAGAAAGGTACTATGGCGGCCGTGGTCGTGGAAGGGGGCGTGGAGATCGTG
GCGGTCGTGGATATGGTGGTGGTTACCAACGTGGCCCATATTCTACATCTGCACCATCCA
TTGAAGATCAGGCTCAGTTCCCAACCCTTGGTGGGAAGCCGCGTGCGTGAACGGTCTAAG
AGCATCGCAGCATTGTTTTTACTGGTGTCACCTTTAAATTTTGCCCGCAGTTGAATCATA
TTGTCACGGTTAATCGGAACAAATAATGGTGTTGCCTGTGCCTTTTTTCCATCGTGTGTT
GGTCTACTTTGTATACCGGAGTTGCTTGTCAGAATTAGCCTCTAATTTTGTAGGCTAGCT
TTTACCATTTTGTTAAAAATCTGCATTCCTTGCATGTTTAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANAAAAANNNNNNANANAAAAAAAAAAA
CCAAANNNNAACCTTTGGGGGGGGGGCCGGGCCCCATTTCCCCTTAATAGGGGCCTTTTT
ACCCCCCCCAAATTGCCTGTGTTTAACAAAGTTGAGATGGGGAAAACCCTGGGCTTTCCC
ACTTAATCCGTTTTGAAAAAATCCCCTTTTCCACGTGTGGTTAAAAAAAAAAGAGGCCCC
CCTGTCCCCTTTTCCAAAAATTGCACCCCTTAATGGGAAATGGGACCCCCCTTTAACGCC
CTATAACCC

consensusID : consensus_14185#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 826
fasta sequence

                              [TTCTGAGAGGCCGCCCCGGAGAAATTATGAGCGCCACAGTGGTACTGGCCGTGGTTATGAGATGAAGCGTGATGGTGCAGGGCGTGGGAACT-GGGGAACTGCTACTGATGAGGCTCTTGCACAGGAGACTGAGGAAGCCTTGAAGGTTGAGGAGAGTGCTCCTATTGCTGAGAAACAGGGTGAGCAGGATGATGCTCCAACTGGAGAGAAGGATAACAAGGAGGGTGCTGCAAATGAGGAAGAAGAGAAGGAAGAGGATAAGGAGATGACTCTTGAGGAGTTTGAGAAATTAAGGGAGGAAAAGCGGAAAGCTCTTCTTGCTTTCAAGGCTGAAGAGAGGAAGGTTGAGGTCGATAAGGACCTGCAGTCTATGCAGCCACTTTCTACCAAGAAAGGAAATGATGAAATTTTCATTAAGCTGGGTTCTGACAAGGATAAGAAGAAGGAAAATGCTGAGCGCGATGAGCGTGCCAAGAAGTCTGTGAGCATCAATGAGTTCCTGAAGCCTGCGGAAGGAGAAAGGTACTATGGCGGCCGTGGTCGTGGAAGGGGGCGTGGAGATCGTGGCGGTCGTGGATATGGTGGTGGTTACCAACGTGGCCCATATTGTACATCTGCACCATCCATTGAAGATCAGGCTCAGTTCCCAACCCTTGGTGGGAAGCCGCGTGCGTGAACGGTCTAAGAGCATCGCAGCATTGTTTTTACTGGTGTCACCTTTAAATTTTGCCCGCAGTTGAATCATATTGTCACGGTTAATCGGAACAAATAATGGGGTTGCCTGTGCCTTTTTTCAAAAAAAAACCAAAAAAAAGGCAGACTAGTT]

[-] EMBL CB682928             [TTCTGAGAGGCCGCCCCGGAGAAATTATGAGCGCCACAGTGGTACTGGCCGTGGTTATGAGATGAAGCGTGATGGTGCAGGGCGTGGGAACT GGGGAACTGCTACTGATGAGGCTCTTGCACAGGAGACTGAGGAAGCCTTGAAGGTTGAGGAGAGTGCTCCTATTGCTGAGAAACAGGGTGAGCAGGATGATGCTCCAACTGGAGAGAAGGATAACAAGGAGGGTGCTGCAAATGAGGAAGAAGAGAAGGAAGAGGATAAGGAGATGACTCTTGAGGAGTTTGAGAAATTAAGGGAGGAAAAGCGGAAAGCTCTTCTTGCTTTCAAGGCTGAAGAGAGGAAGGTTGAGGTCGATAAGGACCTGCAGTCTATGCAGCCACTTTCTACCAAGAAAGGAAATGATGAAATTTTCATTAAGCTGGGTTCTGACAAGGATAAGAAGAAGGAAAATGCTGAGCGCGATGAGCGTGCCAAGAAGTCTGTGAGCATCAATGAGTTCCTGAAGCCTGCGGAAGGAGAAAGGTACTATGGCGGCCGTGGTCGTGGAAGGGGGCGTGGAGATCGTGGCGGTCGTGGATATGGTGGTGGTTACCAACGTGGCCCATATTTTACATCTGCACCATCCATTGAAGATCAGGCTCAGTTCCCAACCCTTGGTGGGAAGCCGCGTGCGTGAACGGTCTAAGAGCATCGCAGCATTGTTTTTACTGGTGTCACCTTTAAATTTTGCCCGCAGTTGAATCATATTGTCACGGTTAATCGGAACAAATAAAGGGGTTGCCTGTGCCTTTTTTCAAAAAAAAACCAAAAAAAAGG          ]
[-] EMBL CB682927             [                                                                    GTGATGGTGCAGGGCGTGGGAACTGGGGGAACTGCTATTGATGAGGCTCTTGCACAGGAGACTGAGGAAGCCTTGAAGGTTGAGGAGAGTGCTCCTATTGCTGAGAAACAGGGTGAGCAGGATGATGCTCCAACTGGAGAGAAGGATAACAAGGAGGGTGCTGCAAATGAGGAAGAAGAGAAGGAAGAGGATAAGGAGATGACTCTTGAGGAGTTTGAGAAATTAAGGGAGGAAAAGCGGAAAGCTCTTCTTGCTTTCAAGGCTGAAGAGAGGAAGGTTGAGGTCGATAAGGACCTGCAGTCTATGCAGCCACTTTCTACCAAGAAAGGAAATGATGAAATTTTCATTAAGCTGGGTTTTGCCAAGGATAAGAAGAAGGAAAATGCTGAGCGCGATGAGCGTGCCAAGAAGTCTGTGAGCATCAATGAGTTCCTGAAGCCTGCGGAAGGAGAAAGGTATTATGGCGCCCGTGGTCGTGGAAGGGGGCGTGGAGATCGTGGCGGTCGTGGATATGGTGGTGGTTACCAACGTGGCCCATATTGTACATCTGCCCCATCCATTGAAGATCAGGCTCAGTTCCCATTCCTTGGTGGGAACCTGCGTGCGTGAACGGTGTAAGAGCATAGCAGCATTGTGTTTTCTGGTGTCTCCTTTAAATTTTGCCCGCAGTTGAATCATATTGTCACCGTTAATCGGAACAATTAATGGGGgg                                               ]
[+] EMBL OSC30441             [                                                                                                      CTACTGATGAGGCTCTTGCACAGGAGACTGAGGAAGCCTTGAAGGTTGAGGAGAGTGCTCCTATTGCTGAGAAACAGGGTGAGCAGGATGATGCTCCAACTGGAGAGAAGGATAACAAGGAGGGTGCTGCAAATGAGGAAGAAGAGAAGGAAGAGGATAAGGAGATGACTCTTGAGGAGTTTGAGAAATTAAGGGAGGAAAAGCGGAAAGCTCTTCTTGCTTTCAAGGCTGAAGAGAGGAAGGTTGAGGTCGATAAGGACCTGCAGTCTATGCAGCCACTTTCTACCAAGAAAGGAAATGATGAAATTTTCATTAAGCTGGGTTCTGACAAGGATAAGAAG AGGAAAATGCTGAGCG                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL OSC29951             [                                                                                                      CTACTGATGAGGCTCTTGCACAGGAGACTGAGGAAGCCTTGAAGGTTGAGGAGAGTNCTCCTATTGCTGAGAAACAGGGTGAGCAGGATGATGCTCCAACTGGAGAGAAGGATAACAAGGAGGGTGCTGCAAATGAGGAAGAAGAGAAGGAAGAGGATAAGGAGATGACTCTTGAGGAGTTTGAGAAATTAAGGGAGGAAAAGCGGAAAGCTCTTCTTGCTTTCAAGGCTGAAGAGAGGAAGGTTGANGTCGATAAGGACCTGCAGTCTATGCAGCCACTTTCTACCAAGAAAGGAAATGATGAAATTT                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL BE040053             [                                                                                                                                                                                                                                                                                                                       GCTCTTCTTGCTTTCAAGGCTGAAGAGAGGAAGGTTGAGGTTGATAAGGACCTGCAGTCTATGCAGCCACTTTCTACCAAGAAAGGAAATGATGAAATTTTCATTAAGCTGGGTTCTGACAAGGATAAGAAGAAGGAAAATGCTGAGCGCGATGAGCGTGCCAAGAAGTCTGTGAGCATCAATGAGTTCCTGAAGCCTGCGGAAGGAGAAAGGTACTATGGCGGCCGTGGTCGTGGAAGGGGGCGTGGAGATCGTGGCGGTCGTGGATATGGTGGTGGTTACCAACGTGGCCCATATTCTACATCTGCACCATCCATTGAAGATCAGGCTCAGTTCCCAACCCTTGGTGGGAAGCCGCGTGCGTGAACGGTCTAAGAGCATCGCAGCATTGTTTTTACTGGTGTCACCTTTAAATTTTGCCCGCAGTTGAATCATATTGTCACGGTTAATCGGAACAAATAATGGTGTTGCCTGTGCCTTTTTTCAAAAAAAAAAAAAAAAAAACTCAGACTAGTT]




>consensus_14185#1
TTCTGAGAGGCCGCCCCGGAGAAATTATGAGCGCCACAGTGGTACTGGCCGTGGTTATGA
GATGAAGCGTGATGGTGCAGGGCGTGGGAACTGGGGAACTGCTACTGATGAGGCTCTTGC
ACAGGAGACTGAGGAAGCCTTGAAGGTTGAGGAGAGTGCTCCTATTGCTGAGAAACAGGG
TGAGCAGGATGATGCTCCAACTGGAGAGAAGGATAACAAGGAGGGTGCTGCAAATGAGGA
AGAAGAGAAGGAAGAGGATAAGGAGATGACTCTTGAGGAGTTTGAGAAATTAAGGGAGGA
AAAGCGGAAAGCTCTTCTTGCTTTCAAGGCTGAAGAGAGGAAGGTTGAGGTCGATAAGGA
CCTGCAGTCTATGCAGCCACTTTCTACCAAGAAAGGAAATGATGAAATTTTCATTAAGCT
GGGTTCTGACAAGGATAAGAAGAAGGAAAATGCTGAGCGCGATGAGCGTGCCAAGAAGTC
TGTGAGCATCAATGAGTTCCTGAAGCCTGCGGAAGGAGAAAGGTACTATGGCGGCCGTGG
TCGTGGAAGGGGGCGTGGAGATCGTGGCGGTCGTGGATATGGTGGTGGTTACCAACGTGG
CCCATATTGTACATCTGCACCATCCATTGAAGATCAGGCTCAGTTCCCAACCCTTGGTGG
GAAGCCGCGTGCGTGAACGGTCTAAGAGCATCGCAGCATTGTTTTTACTGGTGTCACCTT
TAAATTTTGCCCGCAGTTGAATCATATTGTCACGGTTAATCGGAACAAATAATGGGGTTG
CCTGTGCCTTTTTTCAAAAAAAAACCAAAAAAAAGGCAGACTAGTT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14185#0      CTCCCCCCACTACTCCTTTCGTCTCCAACCCCTCGCCGCCGCCGCCACCCAAAACCCTAC 60
consensus_14185#1      ------------------------------------------------------------
                                                                                   

consensus_14185#0      CCTTCCCCTCCCCGTATTCTAATGGCGCTGCAACCAATCCGGCACAGCTGCTAGCAATCG 120
consensus_14185#1      ------------------------------------------------------------
                                                                                   

consensus_14185#0      ACTCCCATCATCCGCGCGCGTCGAGTAGCTCCGTGAACCTACCGCAGCCTCTCCTCTCTC 180
consensus_14185#1      ------------------------------------------------------------
                                                                                   

consensus_14185#0      TCTCTCTCCGGCGCCGCCCCCCCCCCCCCCCCCCCCCGCGTCTCGCCATGGCGACCCTCA 240
consensus_14185#1      ------------------------------------------------------------
                                                                                   

consensus_14185#0      ACATGTTCGACATCCTCGGTGCGGACGACAACGACGACCCCTCGCAGCTGCTGGCCGCGG 300
consensus_14185#1      ------------------------------------------------------------
                                                                                   

consensus_14185#0      CCGCGGCCGCGGCGCAGAAGGCCGAGGCGAAGAAGGCCGCCGCCGCCGCGGCGGCGCCCG 360
consensus_14185#1      ------------------------------------------------------------
                                                                                   

consensus_14185#0      CTGGGAAGGCGGCCCAGGCCGCGTCGGCCGCCGCCAAGTTCCCCACCAAGCCCGCTCCCC 420
consensus_14185#1      ------------------------------------------------------------
                                                                                   

consensus_14185#0      CCACCCAGGCTGCGCGGGAGGCACGGGGTGGTGGTGCACCATCACGTGGAGGATTTGGCC 480
consensus_14185#1      ------------------------------------------------------------
                                                                                   

consensus_14185#0      GTGGTGAGCGTGGCCGTGGCAGAGGTGGACGGGGATATGGCCAGAACCGTGATTTTGGTG 540
consensus_14185#1      ------------------------------------------------------------
                                                                                   

consensus_14185#0      GAGACAATGCCAATGGCTACCAGGGTGGTTACGGTGGAGGCTATGGAGATGGGGCTGTTG 600
consensus_14185#1      ------------------------------------------------------------
                                                                                   

consensus_14185#0      CTGCTGGTGGAGAAGGTGACAGGGAGAGAGGCCCTCGAGCTCCATTCCATGGAGGTAGGC 660
consensus_14185#1      ------------------------------------------------------------
                                                                                   

consensus_14185#0      GTGGTGGCTACCGAAATGGTGAATATGGGGATGATTCTGAGAGGCCGCCCCGGAGAAATT 720
consensus_14185#1      ----------------------------------TTCTGAGAGGCCGCCCCGGAGAAATT 26
                                                         **************************

consensus_14185#0      ATGAGCGCCACAGTGGTACTGGCCGTGGTTATGAGATGAAGCGTGATGGTGCAGGGCGTG 780
consensus_14185#1      ATGAGCGCCACAGTGGTACTGGCCGTGGTTATGAGATGAAGCGTGATGGTGCAGGGCGTG 86
                       ************************************************************

consensus_14185#0      GGAACTGGGGAACTGCTACTGATGAGGCTCTTGCACAGGAGACTGAGGAAGCCTTGAAGG 840
consensus_14185#1      GGAACTGGGGAACTGCTACTGATGAGGCTCTTGCACAGGAGACTGAGGAAGCCTTGAAGG 146
                       ************************************************************

consensus_14185#0      TTGAGGAGAGTGCTCCTATTGCTGAGAAACAGGGTGAGCAGGATGATGCTCCAACTGGAG 900
consensus_14185#1      TTGAGGAGAGTGCTCCTATTGCTGAGAAACAGGGTGAGCAGGATGATGCTCCAACTGGAG 206
                       ************************************************************

consensus_14185#0      AGAAGGATAACAAGGAGGGTGCTGCAAATGAGGAAGAAGAGAAGGAAGAGGATAAGGAGA 960
consensus_14185#1      AGAAGGATAACAAGGAGGGTGCTGCAAATGAGGAAGAAGAGAAGGAAGAGGATAAGGAGA 266
                       ************************************************************

consensus_14185#0      TGACTCTTGAGGAGTTTGAGAAATTAAGGGAGGAAAAGCGGAAAGCTCTTCTTGCTTTCA 1020
consensus_14185#1      TGACTCTTGAGGAGTTTGAGAAATTAAGGGAGGAAAAGCGGAAAGCTCTTCTTGCTTTCA 326
                       ************************************************************

consensus_14185#0      AGGCTGAAGAGAGGAAGGTTGAGGTCGATAAGGACCTGCAGTCTATGCAGCCACTTTCTA 1080
consensus_14185#1      AGGCTGAAGAGAGGAAGGTTGAGGTCGATAAGGACCTGCAGTCTATGCAGCCACTTTCTA 386
                       ************************************************************

consensus_14185#0      CCAAGAAAGGAAATGATGAAATTTTCATTAAGCTGGGTTCTGACAAGGATAAGAAGAAGG 1140
consensus_14185#1      CCAAGAAAGGAAATGATGAAATTTTCATTAAGCTGGGTTCTGACAAGGATAAGAAGAAGG 446
                       ************************************************************

consensus_14185#0      AAAATGCTGAGCGCGATGAGCGTGCCAAGAAGTCTGTGAGCATCAATGAGTTCCTGAAGC 1200
consensus_14185#1      AAAATGCTGAGCGCGATGAGCGTGCCAAGAAGTCTGTGAGCATCAATGAGTTCCTGAAGC 506
                       ************************************************************

consensus_14185#0      CTGCGGAAGGAGAAAGGTACTATGGCGGCCGTGGTCGTGGAAGGGGGCGTGGAGATCGTG 1260
consensus_14185#1      CTGCGGAAGGAGAAAGGTACTATGGCGGCCGTGGTCGTGGAAGGGGGCGTGGAGATCGTG 566
                       ************************************************************

consensus_14185#0      GCGGTCGTGGATATGGTGGTGGTTACCAACGTGGCCCATATTCTACATCTGCACCATCCA 1320
consensus_14185#1      GCGGTCGTGGATATGGTGGTGGTTACCAACGTGGCCCATATTGTACATCTGCACCATCCA 626
                       ****************************************** *****************

consensus_14185#0      TTGAAGATCAGGCTCAGTTCCCAACCCTTGGTGGGAAGCCGCGTGCGTGAACGGTCTAAG 1380
consensus_14185#1      TTGAAGATCAGGCTCAGTTCCCAACCCTTGGTGGGAAGCCGCGTGCGTGAACGGTCTAAG 686
                       ************************************************************

consensus_14185#0      AGCATCGCAGCATTGTTTTTACTGGTGTCACCTTTAAATTTTGCCCGCAGTTGAATCATA 1440
consensus_14185#1      AGCATCGCAGCATTGTTTTTACTGGTGTCACCTTTAAATTTTGCCCGCAGTTGAATCATA 746
                       ************************************************************

consensus_14185#0      TTGTCACGGTTAATCGGAACAAATAATGGTGTTGCCTGTGCCTTTTTTCCATCGTGTGTT 1500
consensus_14185#1      TTGTCACGGTTAATCGGAACAAATAATGGGGTTGCCTGTGCCTTTTTTCAAAAAAAAACC 806
                       ***************************** ******************* *         

consensus_14185#0      GGTCTACTTTGTATACCGGAGTTGCTTGTCAGAATTAGCCTCTAATTTTGTAGGCTAGCT 1560
consensus_14185#1      AAAAAA------AAGGCAGACTAGTT---------------------------------- 826
                            *      *   * ** * * *                                  

consensus_14185#0      TTTACCATTTTGTTAAAAATCTGCATTCCTTGCATGTTTAAAAAAAAAAAAAAAAAAAAA 1620
consensus_14185#1      ------------------------------------------------------------
                                                                                   

consensus_14185#0      AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANAAAAANNNNNNANANAAAAAAAAAAA 1680
consensus_14185#1      ------------------------------------------------------------
                                                                                   

consensus_14185#0      CCAAANNNNAACCTTTGGGGGGGGGGCCGGGCCCCATTTCCCCTTAATAGGGGCCTTTTT 1740
consensus_14185#1      ------------------------------------------------------------
                                                                                   

consensus_14185#0      ACCCCCCCCAAATTGCCTGTGTTTAACAAAGTTGAGATGGGGAAAACCCTGGGCTTTCCC 1800
consensus_14185#1      ------------------------------------------------------------
                                                                                   

consensus_14185#0      ACTTAATCCGTTTTGAAAAAATCCCCTTTTCCACGTGTGGTTAAAAAAAAAAGAGGCCCC 1860
consensus_14185#1      ------------------------------------------------------------
                                                                                   

consensus_14185#0      CCTGTCCCCTTTTCCAAAAATTGCACCCCTTAATGGGAAATGGGACCCCCCTTTAACGCC 1920
consensus_14185#1      ------------------------------------------------------------
                                                                                   

consensus_14185#0      CTATAACCC 1929
consensus_14185#1      ---------