cluster # 1420

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Oryza sativa
cluster # 1420 cluster # 1420 Sequences # 2 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1420#0 length = 3186 sequences # 1

consensus_1420#1 length = 120 sequences # 1

consensusID : consensus_1420#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 3186
fasta sequence

                              [TCCTCCACCCACGCCGCGACGACGAGTCGCCGCCGCGGCCTCGCCGGCGACCAGGTCTCCGGCGGCCCCGCCGCCCGCCGTGACGGGGCTCCGGCCTTCCGCCCTCCTCCCCGCACCGCCCGCTATCTCGGCTCCCCGACTCCTGCATTCCCCCGACTCTCCCCCGGCCGCCGCCGCCGCCATTTCTGACTCTTTCTCCGCGGCGCGTCTCTCCTCCGAGAGCACGCCGACCGCCTCCCGAAGCGGCGTCGCGGCCGCGGCGGCCGCCGCCTTCTCCCGCCCCTGATGGCTGGCGATTCCCGAAATGAGCCGATGTTTTGCGAGGAAGGGAGCAGTGAATCGGGCTATGTTCTATGTGTTATTGATTCGCTGAAGAAGAAAATCACATCGGACCGCTTTGTTTACATCCAGAAAAGGGTAGAGGAGAATAGCATTAAGCTTAGCCCGATTACACTGCACTCTCACAATTTGTCAAAAAATAGGCAAACTAGTACATCCAACAGTACAGATTTAGTCTCGAATTTGCTCACAAAGAGGAAAGAAGATGCCCTGTGTGCTGTGAATAGTCGTGAGTCATCTCCTGATGAAAGTGAAGGTGCCAATTGCCAAGATGAGTGTTCATCGACTGTTATTGTGGGTGGAAATCTATCCGCGAGGAATTCTGTCCGTCCGATTAGACTACCAGAAGTGGCAACACTCCCTCCATATACAACTTGGATATTTTTGGACAGGAACCAGCGGATGCAAGAAGACCAATCTGTACTTGGTCGTCGAAGGATTTACTATGATACAAACTGTGGCGAAGCTTTAATTTGCAGTGATAGTGAAGATGAAGCTGTTGAGGACGAGGAAGAGAAAAAGGAGTTCAAGGATTCTGAAGATTGCATAATTCGGATGACCATTCAAGAATGTGGCATGTCTGATGCTGTGCTTGAAACTCTAGCTCGAGATATCGAAAGGGCTCCTGATGATATAAAGGCCAGGTATGAGATCCTACGGGGAGAAACCTGAGGGTTCTTCCAAGAAAGTGTCTGAACTTAATGTCAAAATGGAAGACGTGTACGGTGATAAAGATCTGGATGCAGCATTGGATTCCTTTGACAATCTCTTTTGTCGCCGATGTTTGGTTTTTGATTGCAAGCTACATGGGTGTTCTCAAGATTTAGTATTTCCGACTGAAAAGCAGGCACCATTGTGCAGCTCGGATGAGGGTACACCATGTGGTATTCACTGTTACAAACTGGTCTCTAAACCAGATGCTATCATGGAGATTGATTCTCATTTGCTTGTTGATGTTGAGGAGCCAACATCGGACAATCTAAAGGATCAGATAGGGTCAAATAAGAAAAAGCTTGGTTCTAGTGGGCAGAAAACAAAATCTCAACAAAGTGAAAGTTCTTCAACTGCAAGGGTTTCCTCAGAAAGCAGTGAGTCTGAAGTACAACTGTTAAGCAATAAATCCCCGCAACACTCTCCTGGCCTCTCAAAAAATAAGCTTGGCGCAAAAGGTGGAATCAAGAAAAGTACTAACAGAAGAATTGCTGAGAGAATTCTAATGAGTGTGAAAAAGGGGCAACAGGAAATGTCACCGGACTCTAATTCTATTGTTAATGGATGCCATTGGCCTAGGGATATGAAGCTTAGATCTGATACTAGGAGTGGTATTAAGGATTCTGTTGTATCCTCACAGTGTAATTCTCCAAGCACAAGGAGTTTAGAAAGAAGGGCACACTTCAAATGGAGAATAACTCATCTTTTGTGGATGCTCAGAGTGATTCAATGGAGGATACAAATAATGAACATTCAGCAACAGATGGTTGTGATAGTTCAAGGAAAGAGGAATGTGTTGATGAGAGTATATGCAGGCAAGAAGCTCATGGCAGGTCCTGGAAAGTGATTGAGCAAGGGCTTCTATTGAAAGGATTAGAGATTTTTGGAAAGAACAGTTGTTTAATTGCTCGGAACCTTCTGGGTGGGATGAAAACATGCACAGATGTTTTTCAGTATATGAATTACATTGAAAACAGCAGTGCATCTGGAGCTCTTAGTGGTGTTGATTCTCTTGTTAAAGGATATATGAAGGGTAATGAATTACGGACAAGATCAAGATTTGTGAGAAGGCGAGGAAGGGTCCGCCGTTTGAAGTACACCTGGAAAACTGCAGGCTACCATTTTATAAGGAAAAGGATTACAGAAAGGAAGGATCAGCCTTGTCGACAATACACTCCTTGTGGTTGCCAGTCTGCATGTGGGAAGCAATGTCCATGTCTCACAAATGGTACCTGCTGTGAGAAATACTGTGGGTGCCCGAAAATGTGCAAGAATCGCTTCCGAGGTTGCCATTGCGCAAAGAGTCAGTGTCGCAGCCGGCAGTGTCCATGCTTTGCTGCTGACAGGGAATGTGATCCTGATGTGTGTAGAAACTGCTGGGTAGGGTGCGGTGATGGTACATTGGGAGTCCCTAACCAAAGAGGTGATAATTATGAATGCCGGAACATGAAACTGCTGCTTAAACAGTAACAAAGGGTCTTACTTGGGAGATCTGATGTTTCTGGCTGGGGAGCTTTCCTCAAGAATAGTGTTGGGAAGCACGAGTATCTTGGCGAGTACACTGGGGAGCTTATCTCCCATAAAGAAGCTGACAAGCGTGGAAAGATATATGACCGTGAGAATTCATCGTTCCTTTTCAACTTGAACAATGAGTACGTTCTTGATGCCTACAGAATGGGCGACAAGCTGAAGTTCGCCAACCATTCCCCTGATCCAAACTGCTACGCCAAGGTCATCATGGTAGCAGGCGATCACAGGGTGGGGATCTTCGCCAAAGAGCGGATCAGCGCGGGCGAGGAGCTGTTCTACGACTACCGCTACGAGCCCGACCGGGCCCCGGCGTGGGCTCGCAAGCCCGAGGGGCCCGGTGCCAAGGACGACGCCCAGCCTTCCACCGGGAGAGCAAAGAAGCTCGCCCACTGAAGAAGAAGAAGAAGAAGAAGATCAGCCGTTGATTCTTTTGTTGTCTTGGTTGATTCTTTCGTTATTGGTGAGGGGGACCGAGAACTCTGACGGTGATTAGCGCCGTAAGGAAAACTTTCCTGCCATTCGTTGGCCCCCTCGATTCGATTCGTTGATTTTCCCTGAATTCTGTAACTGCTGCACCTGTCGCCTGTTCAACTTCAAAAGATTTTT]

[+] EMBL AK111743             [TCCTCCACCCACGCCGCGACGACGAGTCGCCGCCGCGGCCTCGCCGGCGACCAGGTCTCCGGCGGCCCCGCCGCCCGCCGTGACGGGGCTCCGGCCTTCCGCCCTCCTCCCCGCACCGCCCGCTATCTCGGCTCCCCGACTCCTGCATTCCCCCGACTCTCCCCCGGCCGCCGCCGCCGCCATTTCTGACTCTTTCTCCGCGGCGCGTCTCTCCTCCGAGAGCACGCCGACCGCCTCCCGAAGCGGCGTCGCGGCCGCGGCGGCCGCCGCCTTCTCCCGCCCCTGATGGCTGGCGATTCCCGAAATGAGCCGATGTTTTGCGAGGAAGGGAGCAGTGAATCGGGCTATGTTCTATGTGTTATTGATTCGCTGAAGAAGAAAATCACATCGGACCGCTTTGTTTACATCCAGAAAAGGGTAGAGGAGAATAGCATTAAGCTTAGCCCGATTACACTGCACTCTCACAATTTGTCAAAAAATAGGCAAACTAGTACATCCAACAGTACAGATTTAGTCTCGAATTTGCTCACAAAGAGGAAAGAAGATGCCCTGTGTGCTGTGAATAGTCGTGAGTCATCTCCTGATGAAAGTGAAGGTGCCAATTGCCAAGATGAGTGTTCATCGACTGTTATTGTGGGTGGAAATCTATCCGCGAGGAATTCTGTCCGTCCGATTAGACTACCAGAAGTGGCAACACTCCCTCCATATACAACTTGGATATTTTTGGACAGGAACCAGCGGATGCAAGAAGACCAATCTGTACTTGGTCGTCGAAGGATTTACTATGATACAAACTGTGGCGAAGCTTTAATTTGCAGTGATAGTGAAGATGAAGCTGTTGAGGACGAGGAAGAGAAAAAGGAGTTCAAGGATTCTGAAGATTGCATAATTCGGATGACCATTCAAGAATGTGGCATGTCTGATGCTGTGCTTGAAACTCTAGCTCGAGATATCGAAAGGGCTCCTGATGATATAAAGGCCAGGTATGAGATCCTACGGGGAGAAACCTGAGGGTTCTTCCAAGAAAGTGTCTGAACTTAATGTCAAAATGGAAGACGTGTACGGTGATAAAGATCTGGATGCAGCATTGGATTCCTTTGACAATCTCTTTTGTCGCCGATGTTTGGTTTTTGATTGCAAGCTACATGGGTGTTCTCAAGATTTAGTATTTCCGACTGAAAAGCAGGCACCATTGTGCAGCTCGGATGAGGGTACACCATGTGGTATTCACTGTTACAAACTGGTCTCTAAACCAGATGCTATCATGGAGATTGATTCTCATTTGCTTGTTGATGTTGAGGAGCCAACATCGGACAATCTAAAGGATCAGATAGGGTCAAATAAGAAAAAGCTTGGTTCTAGTGGGCAGAAAACAAAATCTCAACAAAGTGAAAGTTCTTCAACTGCAAGGGTTTCCTCAGAAAGCAGTGAGTCTGAAGTACAACTGTTAAGCAATAAATCCCCGCAACACTCTCCTGGCCTCTCAAAAAATAAGCTTGGCGCAAAAGGTGGAATCAAGAAAAGTACTAACAGAAGAATTGCTGAGAGAATTCTAATGAGTGTGAAAAAGGGGCAACAGGAAATGTCACCGGACTCTAATTCTATTGTTAATGGATGCCATTGGCCTAGGGATATGAAGCTTAGATCTGATACTAGGAGTGGTATTAAGGATTCTGTTGTATCCTCACAGTGTAATTCTCCAAGCACAAGGAGTTTAGAAAGAAGGGCACACTTCAAATGGAGAATAACTCATCTTTTGTGGATGCTCAGAGTGATTCAATGGAGGATACAAATAATGAACATTCAGCAACAGATGGTTGTGATAGTTCAAGGAAAGAGGAATGTGTTGATGAGAGTATATGCAGGCAAGAAGCTCATGGCAGGTCCTGGAAAGTGATTGAGCAAGGGCTTCTATTGAAAGGATTAGAGATTTTTGGAAAGAACAGTTGTTTAATTGCTCGGAACCTTCTGGGTGGGATGAAAACATGCACAGATGTTTTTCAGTATATGAATTACATTGAAAACAGCAGTGCATCTGGAGCTCTTAGTGGTGTTGATTCTCTTGTTAAAGGATATATGAAGGGTAATGAATTACGGACAAGATCAAGATTTGTGAGAAGGCGAGGAAGGGTCCGCCGTTTGAAGTACACCTGGAAAACTGCAGGCTACCATTTTATAAGGAAAAGGATTACAGAAAGGAAGGATCAGCCTTGTCGACAATACACTCCTTGTGGTTGCCAGTCTGCATGTGGGAAGCAATGTCCATGTCTCACAAATGGTACCTGCTGTGAGAAATACTGTGGGTGCCCGAAAATGTGCAAGAATCGCTTCCGAGGTTGCCATTGCGCAAAGAGTCAGTGTCGCAGCCGGCAGTGTCCATGCTTTGCTGCTGACAGGGAATGTGATCCTGATGTGTGTAGAAACTGCTGGGTAGGGTGCGGTGATGGTACATTGGGAGTCCCTAACCAAAGAGGTGATAATTATGAATGCCGGAACATGAAACTGCTGCTTAAACAGTAACAAAGGGTCTTACTTGGGAGATCTGATGTTTCTGGCTGGGGAGCTTTCCTCAAGAATAGTGTTGGGAAGCACGAGTATCTTGGCGAGTACACTGGGGAGCTTATCTCCCATAAAGAAGCTGACAAGCGTGGAAAGATATATGACCGTGAGAATTCATCGTTCCTTTTCAACTTGAACAATGAGTACGTTCTTGATGCCTACAGAATGGGCGACAAGCTGAAGTTCGCCAACCATTCCCCTGATCCAAACTGCTACGCCAAGGTCATCATGGTAGCAGGCGATCACAGGGTGGGGATCTTCGCCAAAGAGCGGATCAGCGCGGGCGAGGAGCTGTTCTACGACTACCGCTACGAGCCCGACCGGGCCCCGGCGTGGGCTCGCAAGCCCGAGGGGCCCGGTGCCAAGGACGACGCCCAGCCTTCCACCGGGAGAGCAAAGAAGCTCGCCCACTGAAGAAGAAGAAGAAGAAGAAGATCAGCCGTTGATTCTTTTGTTGTCTTGGTTGATTCTTTCGTTATTGGTGAGGGGGACCGAGAACTCTGACGGTGATTAGCGCCGTAAGGAAAACTTTCCTGCCATTCGTTGGCCCCCTCGATTCGATTCGTTGATTTTCCCTGAATTCTGTAACTGCTGCACCTGTCGCCTGTTCAACTTCAAAAGATTTTT]




>consensus_1420#0
TCCTCCACCCACGCCGCGACGACGAGTCGCCGCCGCGGCCTCGCCGGCGACCAGGTCTCC
GGCGGCCCCGCCGCCCGCCGTGACGGGGCTCCGGCCTTCCGCCCTCCTCCCCGCACCGCC
CGCTATCTCGGCTCCCCGACTCCTGCATTCCCCCGACTCTCCCCCGGCCGCCGCCGCCGC
CATTTCTGACTCTTTCTCCGCGGCGCGTCTCTCCTCCGAGAGCACGCCGACCGCCTCCCG
AAGCGGCGTCGCGGCCGCGGCGGCCGCCGCCTTCTCCCGCCCCTGATGGCTGGCGATTCC
CGAAATGAGCCGATGTTTTGCGAGGAAGGGAGCAGTGAATCGGGCTATGTTCTATGTGTT
ATTGATTCGCTGAAGAAGAAAATCACATCGGACCGCTTTGTTTACATCCAGAAAAGGGTA
GAGGAGAATAGCATTAAGCTTAGCCCGATTACACTGCACTCTCACAATTTGTCAAAAAAT
AGGCAAACTAGTACATCCAACAGTACAGATTTAGTCTCGAATTTGCTCACAAAGAGGAAA
GAAGATGCCCTGTGTGCTGTGAATAGTCGTGAGTCATCTCCTGATGAAAGTGAAGGTGCC
AATTGCCAAGATGAGTGTTCATCGACTGTTATTGTGGGTGGAAATCTATCCGCGAGGAAT
TCTGTCCGTCCGATTAGACTACCAGAAGTGGCAACACTCCCTCCATATACAACTTGGATA
TTTTTGGACAGGAACCAGCGGATGCAAGAAGACCAATCTGTACTTGGTCGTCGAAGGATT
TACTATGATACAAACTGTGGCGAAGCTTTAATTTGCAGTGATAGTGAAGATGAAGCTGTT
GAGGACGAGGAAGAGAAAAAGGAGTTCAAGGATTCTGAAGATTGCATAATTCGGATGACC
ATTCAAGAATGTGGCATGTCTGATGCTGTGCTTGAAACTCTAGCTCGAGATATCGAAAGG
GCTCCTGATGATATAAAGGCCAGGTATGAGATCCTACGGGGAGAAACCTGAGGGTTCTTC
CAAGAAAGTGTCTGAACTTAATGTCAAAATGGAAGACGTGTACGGTGATAAAGATCTGGA
TGCAGCATTGGATTCCTTTGACAATCTCTTTTGTCGCCGATGTTTGGTTTTTGATTGCAA
GCTACATGGGTGTTCTCAAGATTTAGTATTTCCGACTGAAAAGCAGGCACCATTGTGCAG
CTCGGATGAGGGTACACCATGTGGTATTCACTGTTACAAACTGGTCTCTAAACCAGATGC
TATCATGGAGATTGATTCTCATTTGCTTGTTGATGTTGAGGAGCCAACATCGGACAATCT
AAAGGATCAGATAGGGTCAAATAAGAAAAAGCTTGGTTCTAGTGGGCAGAAAACAAAATC
TCAACAAAGTGAAAGTTCTTCAACTGCAAGGGTTTCCTCAGAAAGCAGTGAGTCTGAAGT
ACAACTGTTAAGCAATAAATCCCCGCAACACTCTCCTGGCCTCTCAAAAAATAAGCTTGG
CGCAAAAGGTGGAATCAAGAAAAGTACTAACAGAAGAATTGCTGAGAGAATTCTAATGAG
TGTGAAAAAGGGGCAACAGGAAATGTCACCGGACTCTAATTCTATTGTTAATGGATGCCA
TTGGCCTAGGGATATGAAGCTTAGATCTGATACTAGGAGTGGTATTAAGGATTCTGTTGT
ATCCTCACAGTGTAATTCTCCAAGCACAAGGAGTTTAGAAAGAAGGGCACACTTCAAATG
GAGAATAACTCATCTTTTGTGGATGCTCAGAGTGATTCAATGGAGGATACAAATAATGAA
CATTCAGCAACAGATGGTTGTGATAGTTCAAGGAAAGAGGAATGTGTTGATGAGAGTATA
TGCAGGCAAGAAGCTCATGGCAGGTCCTGGAAAGTGATTGAGCAAGGGCTTCTATTGAAA
GGATTAGAGATTTTTGGAAAGAACAGTTGTTTAATTGCTCGGAACCTTCTGGGTGGGATG
AAAACATGCACAGATGTTTTTCAGTATATGAATTACATTGAAAACAGCAGTGCATCTGGA
GCTCTTAGTGGTGTTGATTCTCTTGTTAAAGGATATATGAAGGGTAATGAATTACGGACA
AGATCAAGATTTGTGAGAAGGCGAGGAAGGGTCCGCCGTTTGAAGTACACCTGGAAAACT
GCAGGCTACCATTTTATAAGGAAAAGGATTACAGAAAGGAAGGATCAGCCTTGTCGACAA
TACACTCCTTGTGGTTGCCAGTCTGCATGTGGGAAGCAATGTCCATGTCTCACAAATGGT
ACCTGCTGTGAGAAATACTGTGGGTGCCCGAAAATGTGCAAGAATCGCTTCCGAGGTTGC
CATTGCGCAAAGAGTCAGTGTCGCAGCCGGCAGTGTCCATGCTTTGCTGCTGACAGGGAA
TGTGATCCTGATGTGTGTAGAAACTGCTGGGTAGGGTGCGGTGATGGTACATTGGGAGTC
CCTAACCAAAGAGGTGATAATTATGAATGCCGGAACATGAAACTGCTGCTTAAACAGTAA
CAAAGGGTCTTACTTGGGAGATCTGATGTTTCTGGCTGGGGAGCTTTCCTCAAGAATAGT
GTTGGGAAGCACGAGTATCTTGGCGAGTACACTGGGGAGCTTATCTCCCATAAAGAAGCT
GACAAGCGTGGAAAGATATATGACCGTGAGAATTCATCGTTCCTTTTCAACTTGAACAAT
GAGTACGTTCTTGATGCCTACAGAATGGGCGACAAGCTGAAGTTCGCCAACCATTCCCCT
GATCCAAACTGCTACGCCAAGGTCATCATGGTAGCAGGCGATCACAGGGTGGGGATCTTC
GCCAAAGAGCGGATCAGCGCGGGCGAGGAGCTGTTCTACGACTACCGCTACGAGCCCGAC
CGGGCCCCGGCGTGGGCTCGCAAGCCCGAGGGGCCCGGTGCCAAGGACGACGCCCAGCCT
TCCACCGGGAGAGCAAAGAAGCTCGCCCACTGAAGAAGAAGAAGAAGAAGAAGATCAGCC
GTTGATTCTTTTGTTGTCTTGGTTGATTCTTTCGTTATTGGTGAGGGGGACCGAGAACTC
TGACGGTGATTAGCGCCGTAAGGAAAACTTTCCTGCCATTCGTTGGCCCCCTCGATTCGA
TTCGTTGATTTTCCCTGAATTCTGTAACTGCTGCACCTGTCGCCTGTTCAACTTCAAAAG
ATTTTT

consensusID : consensus_1420#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 120
fasta sequence

                              [GGTCCTCTAGCNNCGTAAGNCNANNCTTANCTGCTNATGCGTTGTNNTCCTCGATTCNGATTCGNTGCTTTACCCTGAANTCTGTAACTGCTGCACCTGTCGCCAGTTCAACNTCAAAAG]

[+] EMBL D42738               [GGTCCTCTAGCNNCGTAAGNCNANNCTTANCTGCTNATGCGTTGTNNTCCTCGATTCNGATTCGNTGCTTTACCCTGAANTCTGTAACTGCTGCACCTGTCGCCAGTTCAACNTCAAAAG]




>consensus_1420#1
GGTCCTCTAGCNNCGTAAGNCNANNCTTANCTGCTNATGCGTTGTNNTCCTCGATTCNGA
TTCGNTGCTTTACCCTGAANTCTGTAACTGCTGCACCTGTCGCCAGTTCAACNTCAAAAG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_1420#0      TCCTCCACCCACGCCGCGACGACGAGTCGCCGCCGCGGCCTCGCCGGCGACCAGGTCTCC 60
consensus_1420#1      ------------------------------------------------------------
                                                                                  

consensus_1420#0      GGCGGCCCCGCCGCCCGCCGTGACGGGGCTCCGGCCTTCCGCCCTCCTCCCCGCACCGCC 120
consensus_1420#1      ------------------------------------------------------------
                                                                                  

consensus_1420#0      CGCTATCTCGGCTCCCCGACTCCTGCATTCCCCCGACTCTCCCCCGGCCGCCGCCGCCGC 180
consensus_1420#1      ------------------------------------------------------------
                                                                                  

consensus_1420#0      CATTTCTGACTCTTTCTCCGCGGCGCGTCTCTCCTCCGAGAGCACGCCGACCGCCTCCCG 240
consensus_1420#1      ------------------------------------------------------------
                                                                                  

consensus_1420#0      AAGCGGCGTCGCGGCCGCGGCGGCCGCCGCCTTCTCCCGCCCCTGATGGCTGGCGATTCC 300
consensus_1420#1      ------------------------------------------------------------
                                                                                  

consensus_1420#0      CGAAATGAGCCGATGTTTTGCGAGGAAGGGAGCAGTGAATCGGGCTATGTTCTATGTGTT 360
consensus_1420#1      ------------------------------------------------------------
                                                                                  

consensus_1420#0      ATTGATTCGCTGAAGAAGAAAATCACATCGGACCGCTTTGTTTACATCCAGAAAAGGGTA 420
consensus_1420#1      ------------------------------------------------------------
                                                                                  

consensus_1420#0      GAGGAGAATAGCATTAAGCTTAGCCCGATTACACTGCACTCTCACAATTTGTCAAAAAAT 480
consensus_1420#1      ------------------------------------------------------------
                                                                                  

consensus_1420#0      AGGCAAACTAGTACATCCAACAGTACAGATTTAGTCTCGAATTTGCTCACAAAGAGGAAA 540
consensus_1420#1      ------------------------------------------------------------
                                                                                  

consensus_1420#0      GAAGATGCCCTGTGTGCTGTGAATAGTCGTGAGTCATCTCCTGATGAAAGTGAAGGTGCC 600
consensus_1420#1      ------------------------------------------------------------
                                                                                  

consensus_1420#0      AATTGCCAAGATGAGTGTTCATCGACTGTTATTGTGGGTGGAAATCTATCCGCGAGGAAT 660
consensus_1420#1      ------------------------------------------------------------
                                                                                  

consensus_1420#0      TCTGTCCGTCCGATTAGACTACCAGAAGTGGCAACACTCCCTCCATATACAACTTGGATA 720
consensus_1420#1      ------------------------------------------------------------
                                                                                  

consensus_1420#0      TTTTTGGACAGGAACCAGCGGATGCAAGAAGACCAATCTGTACTTGGTCGTCGAAGGATT 780
consensus_1420#1      ------------------------------------------------------------
                                                                                  

consensus_1420#0      TACTATGATACAAACTGTGGCGAAGCTTTAATTTGCAGTGATAGTGAAGATGAAGCTGTT 840
consensus_1420#1      ------------------------------------------------------------
                                                                                  

consensus_1420#0      GAGGACGAGGAAGAGAAAAAGGAGTTCAAGGATTCTGAAGATTGCATAATTCGGATGACC 900
consensus_1420#1      ------------------------------------------------------------
                                                                                  

consensus_1420#0      ATTCAAGAATGTGGCATGTCTGATGCTGTGCTTGAAACTCTAGCTCGAGATATCGAAAGG 960
consensus_1420#1      ------------------------------------------------------------
                                                                                  

consensus_1420#0      GCTCCTGATGATATAAAGGCCAGGTATGAGATCCTACGGGGAGAAACCTGAGGGTTCTTC 1020
consensus_1420#1      ------------------------------------------------------------
                                                                                  

consensus_1420#0      CAAGAAAGTGTCTGAACTTAATGTCAAAATGGAAGACGTGTACGGTGATAAAGATCTGGA 1080
consensus_1420#1      ------------------------------------------------------------
                                                                                  

consensus_1420#0      TGCAGCATTGGATTCCTTTGACAATCTCTTTTGTCGCCGATGTTTGGTTTTTGATTGCAA 1140
consensus_1420#1      ------------------------------------------------------------
                                                                                  

consensus_1420#0      GCTACATGGGTGTTCTCAAGATTTAGTATTTCCGACTGAAAAGCAGGCACCATTGTGCAG 1200
consensus_1420#1      ------------------------------------------------------------
                                                                                  

consensus_1420#0      CTCGGATGAGGGTACACCATGTGGTATTCACTGTTACAAACTGGTCTCTAAACCAGATGC 1260
consensus_1420#1      ------------------------------------------------------------
                                                                                  

consensus_1420#0      TATCATGGAGATTGATTCTCATTTGCTTGTTGATGTTGAGGAGCCAACATCGGACAATCT 1320
consensus_1420#1      ------------------------------------------------------------
                                                                                  

consensus_1420#0      AAAGGATCAGATAGGGTCAAATAAGAAAAAGCTTGGTTCTAGTGGGCAGAAAACAAAATC 1380
consensus_1420#1      ------------------------------------------------------------
                                                                                  

consensus_1420#0      TCAACAAAGTGAAAGTTCTTCAACTGCAAGGGTTTCCTCAGAAAGCAGTGAGTCTGAAGT 1440
consensus_1420#1      ------------------------------------------------------------
                                                                                  

consensus_1420#0      ACAACTGTTAAGCAATAAATCCCCGCAACACTCTCCTGGCCTCTCAAAAAATAAGCTTGG 1500
consensus_1420#1      ------------------------------------------------------------
                                                                                  

consensus_1420#0      CGCAAAAGGTGGAATCAAGAAAAGTACTAACAGAAGAATTGCTGAGAGAATTCTAATGAG 1560
consensus_1420#1      ------------------------------------------------------------
                                                                                  

consensus_1420#0      TGTGAAAAAGGGGCAACAGGAAATGTCACCGGACTCTAATTCTATTGTTAATGGATGCCA 1620
consensus_1420#1      ------------------------------------------------------------
                                                                                  

consensus_1420#0      TTGGCCTAGGGATATGAAGCTTAGATCTGATACTAGGAGTGGTATTAAGGATTCTGTTGT 1680
consensus_1420#1      ------------------------------------------------------------
                                                                                  

consensus_1420#0      ATCCTCACAGTGTAATTCTCCAAGCACAAGGAGTTTAGAAAGAAGGGCACACTTCAAATG 1740
consensus_1420#1      ------------------------------------------------------------
                                                                                  

consensus_1420#0      GAGAATAACTCATCTTTTGTGGATGCTCAGAGTGATTCAATGGAGGATACAAATAATGAA 1800
consensus_1420#1      ------------------------------------------------------------
                                                                                  

consensus_1420#0      CATTCAGCAACAGATGGTTGTGATAGTTCAAGGAAAGAGGAATGTGTTGATGAGAGTATA 1860
consensus_1420#1      ------------------------------------------------------------
                                                                                  

consensus_1420#0      TGCAGGCAAGAAGCTCATGGCAGGTCCTGGAAAGTGATTGAGCAAGGGCTTCTATTGAAA 1920
consensus_1420#1      ------------------------------------------------------------
                                                                                  

consensus_1420#0      GGATTAGAGATTTTTGGAAAGAACAGTTGTTTAATTGCTCGGAACCTTCTGGGTGGGATG 1980
consensus_1420#1      ------------------------------------------------------------
                                                                                  

consensus_1420#0      AAAACATGCACAGATGTTTTTCAGTATATGAATTACATTGAAAACAGCAGTGCATCTGGA 2040
consensus_1420#1      ------------------------------------------------------------
                                                                                  

consensus_1420#0      GCTCTTAGTGGTGTTGATTCTCTTGTTAAAGGATATATGAAGGGTAATGAATTACGGACA 2100
consensus_1420#1      ------------------------------------------------------------
                                                                                  

consensus_1420#0      AGATCAAGATTTGTGAGAAGGCGAGGAAGGGTCCGCCGTTTGAAGTACACCTGGAAAACT 2160
consensus_1420#1      ------------------------------------------------------------
                                                                                  

consensus_1420#0      GCAGGCTACCATTTTATAAGGAAAAGGATTACAGAAAGGAAGGATCAGCCTTGTCGACAA 2220
consensus_1420#1      ------------------------------------------------------------
                                                                                  

consensus_1420#0      TACACTCCTTGTGGTTGCCAGTCTGCATGTGGGAAGCAATGTCCATGTCTCACAAATGGT 2280
consensus_1420#1      ------------------------------------------------------------
                                                                                  

consensus_1420#0      ACCTGCTGTGAGAAATACTGTGGGTGCCCGAAAATGTGCAAGAATCGCTTCCGAGGTTGC 2340
consensus_1420#1      ------------------------------------------------------------
                                                                                  

consensus_1420#0      CATTGCGCAAAGAGTCAGTGTCGCAGCCGGCAGTGTCCATGCTTTGCTGCTGACAGGGAA 2400
consensus_1420#1      ------------------------------------------------------------
                                                                                  

consensus_1420#0      TGTGATCCTGATGTGTGTAGAAACTGCTGGGTAGGGTGCGGTGATGGTACATTGGGAGTC 2460
consensus_1420#1      ------------------------------------------------------------
                                                                                  

consensus_1420#0      CCTAACCAAAGAGGTGATAATTATGAATGCCGGAACATGAAACTGCTGCTTAAACAGTAA 2520
consensus_1420#1      ------------------------------------------------------------
                                                                                  

consensus_1420#0      CAAAGGGTCTTACTTGGGAGATCTGATGTTTCTGGCTGGGGAGCTTTCCTCAAGAATAGT 2580
consensus_1420#1      ------------------------------------------------------------
                                                                                  

consensus_1420#0      GTTGGGAAGCACGAGTATCTTGGCGAGTACACTGGGGAGCTTATCTCCCATAAAGAAGCT 2640
consensus_1420#1      ------------------------------------------------------------
                                                                                  

consensus_1420#0      GACAAGCGTGGAAAGATATATGACCGTGAGAATTCATCGTTCCTTTTCAACTTGAACAAT 2700
consensus_1420#1      ------------------------------------------------------------
                                                                                  

consensus_1420#0      GAGTACGTTCTTGATGCCTACAGAATGGGCGACAAGCTGAAGTTCGCCAACCATTCCCCT 2760
consensus_1420#1      ------------------------------------------------------------
                                                                                  

consensus_1420#0      GATCCAAACTGCTACGCCAAGGTCATCATGGTAGCAGGCGATCACAGGGTGGGGATCTTC 2820
consensus_1420#1      ------------------------------------------------------------
                                                                                  

consensus_1420#0      GCCAAAGAGCGGATCAGCGCGGGCGAGGAGCTGTTCTACGACTACCGCTACGAGCCCGAC 2880
consensus_1420#1      ------------------------------------------------------------
                                                                                  

consensus_1420#0      CGGGCCCCGGCGTGGGCTCGCAAGCCCGAGGGGCCCGGTGCCAAGGACGACGCCCAGCCT 2940
consensus_1420#1      ------------------------------------------------------------
                                                                                  

consensus_1420#0      TCCACCGGGAGAGCAAAGAAGCTCGCCCACTGAAGAAGAAGAAGAAGAAGAAGATCAGCC 3000
consensus_1420#1      ------------------------------------------------------------
                                                                                  

consensus_1420#0      GTTGATTCTTTTGTTGTCTTGGTTGATTCTTTCGTTATTGGTGAGGGGGACCGAGAACTC 3060
consensus_1420#1      ------------------------------------------------------------
                                                                                  

consensus_1420#0      TGACGGTGAT-TAGCGCCGTAAGG-AAAACTTTCCTGC-CATTCGTTGGCCCCCTCGATT 3117
consensus_1420#1      ----GGTCCTCTAGCNNCGTAAGNCNANNCTTANCTGCTNATGCGTTGTNNTCCTCGATT 56
                          ***  * ****  ******   *  ***  ****  ** *****    ********

consensus_1420#0      CG-ATTCGTTGATTTTCCCTGAATTCTGTAACTGCTGCACCTGTCGCCTGTTCAACTTCA 3176
consensus_1420#1      CNGATTCGNTGCTTTACCCTGAANTCTGTAACTGCTGCACCTGTCGCCAGTTCAACNTCA 116
                      *  ***** ** *** ******* ************************ ******* ***

consensus_1420#0      AAAGATTTTT 3186
consensus_1420#1      AAAG------ 120
                      ****