cluster # 14207

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Oryza sativa
cluster # 14207 cluster # 14207 Sequences # 15 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_14207#0 length = 2225 sequences # 14

consensus_14207#1 length = 508 sequences # 1

consensusID : consensus_14207#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 14
consensus length = 2225
fasta sequence

                              [CCCCTCCTCCTCCTCCTCCTCCTTCGGTAGATCTCTCGCGGCAGCGCAGCCTCCACCTCCTCCTCCTTCTCCGGCCACGGCGGCCGGCATTAGAAGCAGCGGTGGGGGTCCCGGGGCGAAGAGCGGCTTGCGGTGGCGGTGGCGGCGGCGGTTGGGTAGGTGCGGCGGCCGGCCTCGGCTGCGGCGGCGGCGGCGATGTATAAG-AACCAGCTCCAGGAGCTCGCGCAGCGGAGCTG-CTTC-AACCTGCCGGCGTACACCTGCCTGCGGGAGGGGCCGGACCACGCGCCGCGGTTCAAGGCGGCGGTCAACTTCAACGGCGAGCAGTTCGAGAGCCCCGGGTTCTTCACCACGCTCCGCCAGGCCGAGCACGCCGCCGCGGAGGTCGCCCTCGCCGCCCTCGCCCGCCGCGGCCCTTCCTACTCCCTCGCCGCCCGCATCCTGGACGAAACAGGGGTTTACAAGAACCTTCTCCAGGAAGTAGCACAGAGGGTTGGAGCACCATTGCCTTCGTATACAACAGAGCGATCTGGGCTTGGCCACCTTCCGGTTTTCACATGCACAGTAGAGCTAGCTGGGATTACATTTACAGGTGATCCTGCTAAGAACAAGAAACAAGCTGAAAAAAATGCTGCTTCAGCAGCTTGGTCTTCTCTGAGACAATTGGTACGTCAGGAAGCGAGTTCATCAAATGAACCTGAGAGCAATGATGAGCAGGAGCAGATCAGGATTGCTCGAGCTCTTCTCAACTATCGCCTGAAGGAGAAGATGGCGATGGCCAATAATCCACATGCTTCACCCTTCCCAAAGAAATTTCCGATGCAGCCCGAGAGGAGGACAGCATTTCCTCAATCCTCTCACTCCAGCTACTCGAAGATTCTCCCTCTATTTCGCCCCAAGTCTAATTCAAGGTCAAGGCCAGAGTCGCCAGCAGCGTCTGATGCAGCATCACAGACTCCTTTCCGGCCAACTGAAAGTCCAAATCCAAGGTCAAGGTTCCCCGCTGCAGAGGCGGCTCCTTATGTCCCAGTTGGGCACTTCCGTATGCCTTGCCATAGCATGGCTCCTCCAGTCACAGTCAGGACTTCTATCCCTGTTTTCTCTGCTCCACCTCTCCCACCCCCAGGTGCGCGGACACAACAGCTTCCTCCTCTCATGAGCCACCCGCCGCCAATTCGAATGGCTTCCCCGGTTCGCATCAGGCCAGCTCCTCCTCTTTTTACTCCTTCAGCAGTCCAAGGGCCGAAACCTATGATGCCTGTTCAGATAAAGGATGTGCAACACCAACAAATAAAGGAAACCCGGTCACCTGTGATGCCTGTTCAGGTGAAGGATGCACAAAACCAGCTTCTTAAGGGATCCCTTTCACCTGTGATCCCTGTTCAGATAAAGGATGTACAATCCCAGCCACCGAAGGAAGCGCTGTCACCTGCGATCCCTGTTCAGATTAAGGATGTACAACTCCAGCCTCGGAACGAACCAGTGTCAATCGGTAAGGGGGTGGTTCCATTGCCAGCGATTAGGCCTCCGGTTAAGGTTGAGGCTCCAGCTGAAGTCAAGGAAGCTTCACAACCTGTTGCTGGTTCTTCTGTGGTGCAATGCAAGGCTGATACATCGCCGGACTCTCTTCCGAAAACCCAGTTGAAGACCGCCAACGCCGACAACGCTGACGCCAAGGATGATCATCTCCCGGTGGATGCTGAAGAAGTGGAGGACATCATCAGGCATCTCGAGCT-C-AAATAATTTCAGAAAGCGTCAACGAACGAATGGGGCGTCATCTTCTGTCAGATTTTGTAATTAGCTGCCTCCTCCTATGCACATCCCTT-TTCTGTTTTAGTTTTGTTTGCCTTTGGTTCGGATTAGGGGCGCTGGGCAAGCTGCATTTCTCGTAGGGGACA-CCTAGC--TTTTTTTTTTGTTCAGAAGAGA-GGGAAAAAAATGGACAAGACATACA-TGCA-GTGGTAGGCGGTTTGCCCGTTGTTTGGAGATGGATGG-TTGGTTATACTTCCCTGGATATGCAGTTGGTGGTCTGCTTTTACCCCCAATGATGAGGTGGATATTGTTGTTGCCTCTAGGGAAGGAAATTATGTGGCGGCAGTTTTACCTCCTAAAATTTCTCCTAGTCATTCTCCTAATCCTCTTATTACTATTATACTCCTGCTTTGCCATGCTGATGTTTAGAAGTTGGTGATAGTAGAGCTGTAGAGGTAACTATCTTTTCTCACTAATTT]

[+] EMBL AK066524             [CCCCTCCTCCTCCTCCTCCTCCTTCGGTAGATCTCTCGCGGCAGCGCAGCCTCCACCTCCTCCTCCTTCTCCGGCCACGGCGGCCGGCATTAGAAGCAGCGGTGGGGGTCCCGGGGCGAAGAGCGGCTTGCGGTGGCGGTGGCGGCGGCGGTTGGGTAGGTGCGGCGGCCGGCCTCGGCTGCGGCGGCGGCGGCGATGTATAAG AACCAGCTCCAGGAGCTCGCGCAGCGGAGCTG CTTC AACCTGCCGGCGTACACCTGCCTGCGGGAGGGGCCGGACCACGCGCCGCGGTTCAAGGCGGCGGTCAACTTCAACGGCGAGCAGTTCGAGAGCCCCGGGTTCTTCACCACGCTCCGCCAGGCCGAGCACGCCGCCGCGGAGGTCGCCCTCGCCGCCCTCGCCCGCCGCGGCCCTTCCTACTCCCTCGCCGCCCGCATCCTGGACGAAACAGGGGTTTACAAGAACCTTCTCCAGGAAGTAGCACAGAGGGTTGGAGCACCATTGCCTTCGTATACAACAGAGCGATCTGGGCTTGGCCACCTTCCGGTTTTCACATGCACAGTAGAGCTAGCTGGGATTACATTTACAGGTGATCCTGCTAAGAACAAGAAACAAGCTGAAAAAAATGCTGCTTCAGCAGCTTGGTCTTCTCTGAGACAATTGGTACGTCAGGAAGCGAGTTCATCAAATGAACCTGAGAGCAATGATGAGCAGGAGCAGATCAGGATTGCTCGAGCTCTTCTCAACTATCGCCTGAAGGAGAAGATGGCGATGGCCAATAATCCACATGCTTCACCCTTCCCAAAGAAATTTCCGATGCAGCCCGAGAGGAGGACAGCATTTCCTCAATCCTCTCACTCCAGCTACTCGAAGATTCTCCCTCTATTTCGCCCCAAGTCTAATTCAAGGTCAAGGCCAGAGTCGCCAGCAGCGTCTGATGCAGCATCACAGACTCCTTTCCGGCCAACTGAAAGTCCAAATCCAAGGTCAAGGTTCCCCGCTGCAGAGGCGGCTCCTTATGTCCCAGTTGGGCACTTCCGTATGCCTTGCCATAGCATGGCTCCTCCAGTCACAGTCAGGACTTCTATCCCTGTTTTCTCTGCTCCACCTCTCCCACCCCCAGGTGCGCGGACACAACAGCTTCCTCCTCTCATGAGCCACCCGCCGCCAATTCGAATGGCTTCCCCGGTTCGCATCAGGCCAGCTCCTCCTCTTTTTACTCCTTCAGCAGTCCAAGGGCCGAAACCTATGATGCCTGTTCAGATAAAGGATGTGCAACACCAACAAATAAAGGAAACCCGGTCACCTGTGATGCCTGTTCAGGTGAAGGATGCACAAAACCAGCTTCTTAAGGGATCCCTTTCACCTGTGATCCCTGTTCAGATAAAGGATGTACAATCCCAGCCACCGAAGGAAGCGCTGTCACCTGCGATCCCTGTTCAGATTAAGGATGTACAACTCCAGCCTCGGAACGAACCAGTGTCAATCGGTAAGGGGGTGGTTCCATTGCCAGCGATTAGGCCTCCGGTTAAGGTTGAGGCTCCAGCTGAAGTCAAGGAAGCTTCACAACCTGTTGCTGGTTCTTCTGTGGTGCAATGCAAGGCTGATACATCGCCGGACTCTCTTCCGAAAACCCAGTTGAAGACCGCCAACGCCGACAACGCTGACGCCAAGGATGATCATCTCCCGGTGGATGCTGAAGAAGTGGAGGACATCATCAGGCATCTCGAGCT C AAATAATTTCAGAAAGCGTCAACGAACGAATGGGGCGTCATCTTCTGTCAGATTTTGTAATTAGCTGCCTCCTCCTATGCACATCCCTT TTCTGTTTTAGTTTTGTTTGCCTTTGGTTCGGATTAGGGGCGCTGGGCAAGCTGCATTTCTCGTAGGGGACA CCTAGCTTTTTTTTTTTTGTTCAGAAGAGA GGGAAAAAAATGGACAAGACATACA TGCA GTGGTAGGCGGTTTGCCCGTTGTTTGGAGATGGATGG TTGGTTATACTTCCCTGGATATGCAGTTGGTGGTCTGCTTTTACCCCCAATGATGAGGTGGATATTGTTGTTGCCTCTAGGGAAGGAAATTATGTGGCGGCAGTTTTACCTCCTAAAATTTCTCCTAGTCATTCTCCTAATCCTCTTATTACTATTATACTCCTGCTTTGCCATGCTGATGTTTAGAAGTTGGTGATAGTAGAGCTGTAGAGGTAACTATCTTTTCTCACTAATTT]
[+] EMBL OSR24331A            [     CCTCCTCCTCCTCCTCCTTCGGTAGATCTCTCGCGGCAGC CAGCCTCCACCTCCTCCTCCTTCTCCGGCCACGGCGGCCGGCATTAGAAGCAGCGGTGGGGGTCCCGGGGCGAAGAGCGGCTTGCGGTGGCGGTGGCGGCGGCGGTTGGGTAGGTGCGGCGGCCGGCCTCGGCTGCGGCGGCGGCGGCGATGTATAAGAAACCAGCTCCAGGAGCTCGCGCA  GGAGCTGTNTTCAAACCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL OSR1918A             [     CCTCCTCCTCCTCCTCCTTCGGTAGATCTCTCGCGGCA  NCAGNCTCCACCTCCTCCTCCTTCTCCGGCCACGGCGGCCGGCATTAGAAGCAGCGGTGGGGGTCCCGGGGCGAAGAGCGGCTTGCGGTGGCGGTGGCGGCGGCGGTTGGGTAGGTGCGGCGGCCGGCCTCGGCTGCGGCGGCGGCGGCGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CB628330             [                                               AGCCTCCACCTCCTCCTCCTTCTCCGGCCACGGCGGCCGGCATTAGAAGCACCTGTGGGGGTCCCGGGGCGAAGAGCGGCTTGCGGTAGCGGTGGCGGCGGCGGTTGGGTAGGTGCGGCGGCCGGCCTCGGCTGCGGCGGCGGCGGCGATGTATAAG AACCAGCTCCAGGAGCTCGCGCAGCGGAGCTG CTTC AACCTGCCGGCGTACACCTGCCTGCGGGAGGGGCCGGACCACGCGCCACGGCTCAAGGCGGCGGTCAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CB641836             [                                                                                                                                                                                                                                                                                                                                                                                                                                                           GGACGAAACAGGGGTTTACAAGAACCTTCTCCAGGAAGTAGCACAGAGGGTTGGAGCACCATTGCCTTCGTATACAACAGAGCGATCTGGGCTTGGCCACCTTCCGGTTTTCACATGCACAGTAGAGCTAGCTGGGATTACATTTACAGGTGATCCTGCTAAGAACAAGAAACAAGCTGAAAAAAATGCTGCTTCAGCAGCTTGGTCTTCTCTGAGACAATTGGTACGTCAGGAAGCGAGTTCATCAAATGAACCTGAGAGCAATGATGAGCAGGAGCAGATCAGGATTGCTCGAGCTCTTCTCAACTATCGCCTGAAGGAGAAGATGGCGATGGCCAATAATCCACATGCTTCACCCTTCCCAAAGAAATTTCCGATGCAGCCCGAGAGGAGGACAGCATTTCCTCAATCCTCTCACTCCAGCTACTCGAAGATTCTCCCTCTATTTCGCCCCAAGTCTAATTCAAGGTCAAGGCCAGAGTCGCCAGCAGCGTCTGATGCAGCATCACAGACTCCTTTCCGGCCAACTGAAAGTCCAAATCCAAGGTCAAGGTTCCCCGCTGCAGAGGCGGCTCCTTATGTCCCAGTTGGGCACTTCCGTATGCCTTGCCATAGCATGGCTCCTCCAGTCACAGTCAGGACTTCTATCCCTGTTTTCTCTGCTCCACCTCTCCCACCCCCAGGTGCGCGGACACAACAGCTTCCTCCTCTCATGAGCCACCCGCCGCCAATTCGAATGGCTTCCCCGGTTCGCATCAGGGCAGCTCCTCCTCTTTTTACTCCTTCAGCAGTCCAAGGGCCGAAACCTATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CB637545             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CTGACAGCAATGATGAGCAGGAGCATATCAGGATTGCTCGAGCTCTTCTCAACTATCTCCTGAAGGAGAAGATGGCGATGGCCAATAATCCACATGCTTCACCCTTCCCAAAGAAATTTCCGATGCAGCCCGAGAGGAGGACAGCATTTCCTCAATCCTCTCACTCCAGCTACTCGAAGATTCTCCCTCTATTTCGCCCCAAGTCTAATTCAAGGTCAAGGCCAGAGTCGCCAGCAGCGTCTGATGCAGCATCACAGACTCCTTTCCGGCCAACTGAAAGTCCAAATCCAAGGTCAAGGTTCCCCGCTGCAGAGGCGGCTCCTTATGTCCCAGTTGGGCACTTCCGTATGCCTTGCCATAGCATGGCTCCTCCAGTCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CB628331             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CCGGTCACCTGTGATGCCTGTTCAGGTGAAGGATGCACAAAACCAGCTTCTTAAGGGATCCCTTTCACCTGTGATCCCTGTTCAGATAAAGGATGTACAATCCCAGCCACCGAAGGAAGCGCTGTCACCTGCGATCCCTGTTCAGATTAAGGATGTACAACTCCAGCCTCGGAACGAACCAGTGTCAATCGGTAAGGGGGTGGTTCCATTGCCAGCGATTAGGCCTCCGGTTAAGGTTGAGGCTCCAGCTGAAGTCAAGGAAGCTTCACAACCTGTTGCTGGTTCTTCTGTGGTGCAATGCAAGGCTGATACATCGCCGGACTCTCTTCCGAAAACCCAGTTGAAGACCGCCAACGCCGACAACGCTGACGCCAAGGATGATCATCTCCCGGTGGATGCTGAAGAAGTGGAGGACATCATCAGGCATCTCGAGCT C AAATAATTTCAGAAAGCGTCAACGAACGAATGGGGCGTCATCTTCTGTCAGATTTTGTAATTAGCTGCCTCCTCCTATGCACATCCCTT TTCTGTTTTAGTTTTGTTTGCCTTTGGTTCGGATTAGGGGCGCTGGGCAAGCTGCATTTCTCGTAGGGGACA CCTAGC  TTTTTTTTTTGTTCAGAAGAGAGGGGAAAAAAATGGACAAGACATACA TGCA GTGGTAGGCGGTTTGCCCGTTGTTTGGAGATGGATGG TTGGTGATACTTCCCTGGATATGCAGTTGGTGGTCTGCTTTTACCCCCAATGATGAGGTGGA                                                                                                                                                                              ]
[-] EMBL CB641837             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TTCACCTGTGATCCCTGTTCAGATAAAGGATGTACAATCCCAGCCACCGAAGGAAGCGCTGTCACCTGCGATCCCTGTTCAGATTAAGGATGTACAACTCCAGCCTCGGAACGAACCAGTGTCAATCGGTAAGGGGGTGGTTCCATTGCCAGCGATTAGGCCTCCGGTTAAGGTTGAGGCTCCAGCTGAAGTCAAGGAAGCTTCACAACCTGTTGCTGGTTCTTCTGTGGTGCAATGCAAGGCTGATACATCGCCGGACTTTCTTCCGAAAACCCAGTTGAAGACCGCCAACGCCGACAACGCTGACGCCAAGGATGATCATCTCCCGGTGGATGCTGAAGAAGTGGAGGACATCATCAGGCATCTCGAGCT C AAATAATTTCAGAAAGCGTCAACGAACGAATGGGGCGTCATCTTCTGTCAGATTTTGTAATTAGCTGCCTCCTCCTATGCACATCCCTT TTCTGTTTTAGTTTTGTTTGCCTTTGGTTCGGATTAGGGGCGCTGGGCAAGCTGCATTTTTCGTAGGGGACA CCTAGCT TTTTTTTTTTGTTCAGAAGAGA GGGAAAAAAATGGACAAGACATACA TGCA GTGGTAGGCGGTTTGCCCGTTGTTTGGAGATGGATGG TTGGTTATACTTCCCTGGATATGCAGTTGGTGGTCTGCTTTTACCCCCAATGATGAGGTGGATATTGTTGTTGCCTCTAGGGAAGGAAATTGGGTGGCGGCAGTT                                                                                                                                   ]
[-] EMBL CB681563             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CACCTGTGATCCCTGTTCAGATAAAGGATGTACAATCCCAGCCACCGAAGGAAGCGCTGTCACCTGCGATCCCTGTTCAGATTAAGGATGTACAACTCCAGCCTCGGAACGAACCAGTGTCAATCGGTAAGGGGGTGGTTCCATTGCCAGCGATTAGGCCTCCGGTTAAGGTTGAGGCTCCAGCTGAAGTCAAGGAAGCTTCACAACCTGTTGCTGGTTCTTCTGTGGTGCAATGCAAGGCTGATACATCGCCGGACTCTTTTCCGAAAACCCAGTTGAAGACCGCCAACGCCGACAACGCTGACGCCAAGGATGATCATCTCCCGGTGGATGCTGAAGAAGTGGAGGACATCATCAGGCATCTCGAGCT C AAATAATTTCAGAAAGCGTCAACGAACGAATGGGGCGTCATCTTCTGTCAGATTTTGTAATTAGCTGCCTCCTCCTATGCACATCCCTT TTCTGTTTTAGTTTTGTTTGCCTTTGGTTCGGATTAGGGGCGCTGGGCAAGCTGCATTTCTCGTAGGGGACA CCTAGC   TTTTTTTTTGTTCAGAAGAGA GGGAAAAAAATGGACAAGACATACA TGCA GTGGTAGGCGGTTTGCCCGTTGTTTGGAGATGGATGG TTGGTTATACTTCCCTGGATATGCAGTTGGTGGTCTGCTTTTACCCCCAATGATGAGGTGGATATTGTTGTTGCCTCTAGGGAAAGAGATTATGTGGCGGCAGTTTTc                                                                                                                                ]
[+] EMBL C28930               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       AATCCCAGCCACCGAA GAAGCGCTGTCACCTGCNATCCCTGTTCANATTAAGGATGTACAACTCCAGCCTCGGAACGAACCAGTGTCAATCGGTAAGGGGGTGGTTCCATTGCCAGCNATTAGGCCTCCGGTTAAGGTTGAGGCTCCAGCTGAAGTCAAGGAAGCTTCACAACCTGTTGCTGGTTCTNCTNTGGTGCAATGCAAGGNTGATACATCGCCGGACTCTNTTCCGAAAACCCAGTTGAAGACCGCCAACGCCGACAACGNTGACGCCAAGGtt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BI808995             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ACCCAGTTGAAGACCGCC ACGCCGACAACGCTGACGCCAAGGATGATCATCTCCCGGTGGATGCTGAAGAAGTGGAGGACATCATCAGGCATCTCGAGCTCC AAATAATTTCAGAAAGCGTCAACGAACGAATGGGGCGTCATCTTCTGTCAGATTTTGTAATTAGCTGCCTCCTCCTATGCACATCCCTT TTCTGTTTTAGTTTTGTTTGCCTTTGGTTCGGATTAGGGGCGCTGGGCAAGCTGCATTTCTCGTAGGGGACACCCTAGCT TTTTTTTTTTGTTCAGAAGAGAGGGGAAAAAAATGGACAAGACATACACTGCACGTGGTAGGCGGTTTGCCCGTTGTTTGGAGATGGATGG TTGGTTATACTTCCCTGGATATGCAGTTGGTGGTCTGCTTTTACCCCCCATGATGAGGTGGATATTGTTGTTGCCTCTAGGGAAGGAAATTATGTGGC GCCGTTTTACCTCCTAAAAaaaaaa                                                                                                                ]
[+] EMBL AU184314             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AACNCCGACAACGCTGACGCCAAGGATGATCATCTCCCGGTGGATGCTGAAGAAGTGGAGGACATCATCAGGCATCTCGAGCT C AAATAATTTCAGAAAGCGTCAACGAACGAATGGGGCGTCATCTTNTGTCAGATTTTGTAATTAGCTGCCTCCTCCTATGCACATCCCTT TTCTGTTTTAGTTTTGTTTGCCTTTGGTTCGGATTAGGGGCGCTGGGCAAGCTGCATTTNTCGTAGGGGACA CCTAGC  TTTTTTTTTTGTTCAGAAGAGA GGGAAAAAAATGGACAAGACATACA TGCA GTGGTAGGCGGTTTGCCCGTTGTTTGGAGATGGATGG TTGGTTATACTTCCCTGGATATGCAGTTGGTGGTCTGCTTTTACCCCCAATGATGAGGTGGATATTGTTGTTGCCTCTAGGGAAGGAAAaaa                                                                                                                                                ]
[+] EMBL BQ908571             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CGCCAAGGATGATCATCTCCCGGTGGATGCTGAAGAAGTGGAGGACATCATCAGGCATCTCGAGCT CAAAATAATTTCAGAAAGCGTCAACGAACGAATGGGGCGTCATCTTCTGTCAGATTTTGTAATTAGCTGCCTCCTCCTATGCACATCCCTTNTTCTGTTTTAGTTTTGTTTGCCTTTGGTTCGGATTAGGGGCGCTGGGCAAGCTGCATTTCTCGTAGGGGACA CCTAGCG TTTTTTTTTTGTTCAGAAGAGAGGGGAAAAAAATGGACAAGACATACA TGCA GTGGTA GCGGTTTGCCCGTTGTTTGGAGATGGATGGTTTGGTTATACTT CCTGGATATGCAGTTGGTGGTCTGCTTTTACCCCCAATGATGAGGTGGATATTGTTGTTGCCTC                                                                                                                                                               ]
[+] EMBL AU031894             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      cCTGTTTTAGTTTTGTTTGCCNTTGGTTCGGATTAGGGGCGCTGGGCAAGCTGCATTTCTCGTAGGGGACA CCTAGC  TTTTTTTTTTGTTCAGAAGAGA GGGAANNAAATGGACAAGACATACA TGCA GTGGTAGGCGGTTTGCCCGTTGTTTGGAGATGGATGG TTGGTTATACTTCCCTGGATATGCAGTTGGTGGTCTGCTTTTACCCCCAATGATGAGGTGGATATTGTTGTTGCCTCTAGGGAAGGAAAaaa                                                                                                                                                ]




>consensus_14207#0
CCCCTCCTCCTCCTCCTCCTCCTTCGGTAGATCTCTCGCGGCAGCGCAGCCTCCACCTCC
TCCTCCTTCTCCGGCCACGGCGGCCGGCATTAGAAGCAGCGGTGGGGGTCCCGGGGCGAA
GAGCGGCTTGCGGTGGCGGTGGCGGCGGCGGTTGGGTAGGTGCGGCGGCCGGCCTCGGCT
GCGGCGGCGGCGGCGATGTATAAGAACCAGCTCCAGGAGCTCGCGCAGCGGAGCTGCTTC
AACCTGCCGGCGTACACCTGCCTGCGGGAGGGGCCGGACCACGCGCCGCGGTTCAAGGCG
GCGGTCAACTTCAACGGCGAGCAGTTCGAGAGCCCCGGGTTCTTCACCACGCTCCGCCAG
GCCGAGCACGCCGCCGCGGAGGTCGCCCTCGCCGCCCTCGCCCGCCGCGGCCCTTCCTAC
TCCCTCGCCGCCCGCATCCTGGACGAAACAGGGGTTTACAAGAACCTTCTCCAGGAAGTA
GCACAGAGGGTTGGAGCACCATTGCCTTCGTATACAACAGAGCGATCTGGGCTTGGCCAC
CTTCCGGTTTTCACATGCACAGTAGAGCTAGCTGGGATTACATTTACAGGTGATCCTGCT
AAGAACAAGAAACAAGCTGAAAAAAATGCTGCTTCAGCAGCTTGGTCTTCTCTGAGACAA
TTGGTACGTCAGGAAGCGAGTTCATCAAATGAACCTGAGAGCAATGATGAGCAGGAGCAG
ATCAGGATTGCTCGAGCTCTTCTCAACTATCGCCTGAAGGAGAAGATGGCGATGGCCAAT
AATCCACATGCTTCACCCTTCCCAAAGAAATTTCCGATGCAGCCCGAGAGGAGGACAGCA
TTTCCTCAATCCTCTCACTCCAGCTACTCGAAGATTCTCCCTCTATTTCGCCCCAAGTCT
AATTCAAGGTCAAGGCCAGAGTCGCCAGCAGCGTCTGATGCAGCATCACAGACTCCTTTC
CGGCCAACTGAAAGTCCAAATCCAAGGTCAAGGTTCCCCGCTGCAGAGGCGGCTCCTTAT
GTCCCAGTTGGGCACTTCCGTATGCCTTGCCATAGCATGGCTCCTCCAGTCACAGTCAGG
ACTTCTATCCCTGTTTTCTCTGCTCCACCTCTCCCACCCCCAGGTGCGCGGACACAACAG
CTTCCTCCTCTCATGAGCCACCCGCCGCCAATTCGAATGGCTTCCCCGGTTCGCATCAGG
CCAGCTCCTCCTCTTTTTACTCCTTCAGCAGTCCAAGGGCCGAAACCTATGATGCCTGTT
CAGATAAAGGATGTGCAACACCAACAAATAAAGGAAACCCGGTCACCTGTGATGCCTGTT
CAGGTGAAGGATGCACAAAACCAGCTTCTTAAGGGATCCCTTTCACCTGTGATCCCTGTT
CAGATAAAGGATGTACAATCCCAGCCACCGAAGGAAGCGCTGTCACCTGCGATCCCTGTT
CAGATTAAGGATGTACAACTCCAGCCTCGGAACGAACCAGTGTCAATCGGTAAGGGGGTG
GTTCCATTGCCAGCGATTAGGCCTCCGGTTAAGGTTGAGGCTCCAGCTGAAGTCAAGGAA
GCTTCACAACCTGTTGCTGGTTCTTCTGTGGTGCAATGCAAGGCTGATACATCGCCGGAC
TCTCTTCCGAAAACCCAGTTGAAGACCGCCAACGCCGACAACGCTGACGCCAAGGATGAT
CATCTCCCGGTGGATGCTGAAGAAGTGGAGGACATCATCAGGCATCTCGAGCTCAAATAA
TTTCAGAAAGCGTCAACGAACGAATGGGGCGTCATCTTCTGTCAGATTTTGTAATTAGCT
GCCTCCTCCTATGCACATCCCTTTTCTGTTTTAGTTTTGTTTGCCTTTGGTTCGGATTAG
GGGCGCTGGGCAAGCTGCATTTCTCGTAGGGGACACCTAGCTTTTTTTTTTGTTCAGAAG
AGAGGGAAAAAAATGGACAAGACATACATGCAGTGGTAGGCGGTTTGCCCGTTGTTTGGA
GATGGATGGTTGGTTATACTTCCCTGGATATGCAGTTGGTGGTCTGCTTTTACCCCCAAT
GATGAGGTGGATATTGTTGTTGCCTCTAGGGAAGGAAATTATGTGGCGGCAGTTTTACCT
CCTAAAATTTCTCCTAGTCATTCTCCTAATCCTCTTATTACTATTATACTCCTGCTTTGC
CATGCTGATGTTTAGAAGTTGGTGATAGTAGAGCTGTAGAGGTAACTATCTTTTCTCACT
AATTT

consensusID : consensus_14207#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 508
fasta sequence

                              [GCGATTAGGCCTCCGGTTAAGGTTGAGGCTCCAGCTGAAGTCAAGGAAGCTTCACAACCTGTTGCTGGTTCTTCTGTGGTGCAATGCAAGGCTGATACATCGCCGGACTCTCTTCCGAAAACCCAGTTGAAGACCGCCAACGCCGACAACGCTGACGCCAAGGATGATCATCTCCCGGTGGATGCTGAAGAAGTGGAGGACATCATCAGGCATCTCGAGCTCAAATAATTTCAGAAAGCGTCAACGAACGAATGGGGCGTCATCTTCTGTCAGATTTTGTAATTAGCTGCCTCCTCCTATGCACATCCCTTTTCTGTTTTAGTTTTGTTTGCCTTTGGTTCGGATTAGGGGCGCTGGGCAAGCTGCATTTCTCGTAGGGGACACCTAGCTTTTTTTTTTTGTTCAGAAGAGAGGGAAAAAAATGGACAAGACATACATGCAGTGGTAGGCGGTTTGCCCGTTGTTTGGAGATGGATGGTTGGTTATACTTCCCTGGAAAAAAAAAAAA]

[+] EMBL AU093137             [GCGATTAGGCCTCCGGTTAAGGTTGAGGCTCCAGCTGAAGTCAAGGAAGCTTCACAACCTGTTGCTGGTTCTTCTGTGGTGCAATGCAAGGCTGATACATCGCCGGACTCTCTTCCGAAAACCCAGTTGAAGACCGCCAACGCCGACAACGCTGACGCCAAGGATGATCATCTCCCGGTGGATGCTGAAGAAGTGGAGGACATCATCAGGCATCTCGAGCTCAAATAATTTCAGAAAGCGTCAACGAACGAATGGGGCGTCATCTTCTGTCAGATTTTGTAATTAGCTGCCTCCTCCTATGCACATCCCTTTTCTGTTTTAGTTTTGTTTGCCTTTGGTTCGGATTAGGGGCGCTGGGCAAGCTGCATTTCTCGTAGGGGACACCTAGCTTTTTTTTTTTGTTCAGAAGAGAGGGAAAAAAATGGACAAGACATACATGCAGTGGTAGGCGGTTTGCCCGTTGTTTGGAGATGGATGGTTGGTTATACTTCCCTGGAAAAAAAAAAAA]




>consensus_14207#1
GCGATTAGGCCTCCGGTTAAGGTTGAGGCTCCAGCTGAAGTCAAGGAAGCTTCACAACCT
GTTGCTGGTTCTTCTGTGGTGCAATGCAAGGCTGATACATCGCCGGACTCTCTTCCGAAA
ACCCAGTTGAAGACCGCCAACGCCGACAACGCTGACGCCAAGGATGATCATCTCCCGGTG
GATGCTGAAGAAGTGGAGGACATCATCAGGCATCTCGAGCTCAAATAATTTCAGAAAGCG
TCAACGAACGAATGGGGCGTCATCTTCTGTCAGATTTTGTAATTAGCTGCCTCCTCCTAT
GCACATCCCTTTTCTGTTTTAGTTTTGTTTGCCTTTGGTTCGGATTAGGGGCGCTGGGCA
AGCTGCATTTCTCGTAGGGGACACCTAGCTTTTTTTTTTTGTTCAGAAGAGAGGGAAAAA
AATGGACAAGACATACATGCAGTGGTAGGCGGTTTGCCCGTTGTTTGGAGATGGATGGTT
GGTTATACTTCCCTGGAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14207#0      CCCCTCCTCCTCCTCCTCCTCCTTCGGTAGATCTCTCGCGGCAGCGCAGCCTCCACCTCC 60
consensus_14207#1      ------------------------------------------------------------
                                                                                   

consensus_14207#0      TCCTCCTTCTCCGGCCACGGCGGCCGGCATTAGAAGCAGCGGTGGGGGTCCCGGGGCGAA 120
consensus_14207#1      ------------------------------------------------------------
                                                                                   

consensus_14207#0      GAGCGGCTTGCGGTGGCGGTGGCGGCGGCGGTTGGGTAGGTGCGGCGGCCGGCCTCGGCT 180
consensus_14207#1      ------------------------------------------------------------
                                                                                   

consensus_14207#0      GCGGCGGCGGCGGCGATGTATAAGAACCAGCTCCAGGAGCTCGCGCAGCGGAGCTGCTTC 240
consensus_14207#1      ------------------------------------------------------------
                                                                                   

consensus_14207#0      AACCTGCCGGCGTACACCTGCCTGCGGGAGGGGCCGGACCACGCGCCGCGGTTCAAGGCG 300
consensus_14207#1      ------------------------------------------------------------
                                                                                   

consensus_14207#0      GCGGTCAACTTCAACGGCGAGCAGTTCGAGAGCCCCGGGTTCTTCACCACGCTCCGCCAG 360
consensus_14207#1      ------------------------------------------------------------
                                                                                   

consensus_14207#0      GCCGAGCACGCCGCCGCGGAGGTCGCCCTCGCCGCCCTCGCCCGCCGCGGCCCTTCCTAC 420
consensus_14207#1      ------------------------------------------------------------
                                                                                   

consensus_14207#0      TCCCTCGCCGCCCGCATCCTGGACGAAACAGGGGTTTACAAGAACCTTCTCCAGGAAGTA 480
consensus_14207#1      ------------------------------------------------------------
                                                                                   

consensus_14207#0      GCACAGAGGGTTGGAGCACCATTGCCTTCGTATACAACAGAGCGATCTGGGCTTGGCCAC 540
consensus_14207#1      ------------------------------------------------------------
                                                                                   

consensus_14207#0      CTTCCGGTTTTCACATGCACAGTAGAGCTAGCTGGGATTACATTTACAGGTGATCCTGCT 600
consensus_14207#1      ------------------------------------------------------------
                                                                                   

consensus_14207#0      AAGAACAAGAAACAAGCTGAAAAAAATGCTGCTTCAGCAGCTTGGTCTTCTCTGAGACAA 660
consensus_14207#1      ------------------------------------------------------------
                                                                                   

consensus_14207#0      TTGGTACGTCAGGAAGCGAGTTCATCAAATGAACCTGAGAGCAATGATGAGCAGGAGCAG 720
consensus_14207#1      ------------------------------------------------------------
                                                                                   

consensus_14207#0      ATCAGGATTGCTCGAGCTCTTCTCAACTATCGCCTGAAGGAGAAGATGGCGATGGCCAAT 780
consensus_14207#1      ------------------------------------------------------------
                                                                                   

consensus_14207#0      AATCCACATGCTTCACCCTTCCCAAAGAAATTTCCGATGCAGCCCGAGAGGAGGACAGCA 840
consensus_14207#1      ------------------------------------------------------------
                                                                                   

consensus_14207#0      TTTCCTCAATCCTCTCACTCCAGCTACTCGAAGATTCTCCCTCTATTTCGCCCCAAGTCT 900
consensus_14207#1      ------------------------------------------------------------
                                                                                   

consensus_14207#0      AATTCAAGGTCAAGGCCAGAGTCGCCAGCAGCGTCTGATGCAGCATCACAGACTCCTTTC 960
consensus_14207#1      ------------------------------------------------------------
                                                                                   

consensus_14207#0      CGGCCAACTGAAAGTCCAAATCCAAGGTCAAGGTTCCCCGCTGCAGAGGCGGCTCCTTAT 1020
consensus_14207#1      ------------------------------------------------------------
                                                                                   

consensus_14207#0      GTCCCAGTTGGGCACTTCCGTATGCCTTGCCATAGCATGGCTCCTCCAGTCACAGTCAGG 1080
consensus_14207#1      ------------------------------------------------------------
                                                                                   

consensus_14207#0      ACTTCTATCCCTGTTTTCTCTGCTCCACCTCTCCCACCCCCAGGTGCGCGGACACAACAG 1140
consensus_14207#1      ------------------------------------------------------------
                                                                                   

consensus_14207#0      CTTCCTCCTCTCATGAGCCACCCGCCGCCAATTCGAATGGCTTCCCCGGTTCGCATCAGG 1200
consensus_14207#1      ------------------------------------------------------------
                                                                                   

consensus_14207#0      CCAGCTCCTCCTCTTTTTACTCCTTCAGCAGTCCAAGGGCCGAAACCTATGATGCCTGTT 1260
consensus_14207#1      ------------------------------------------------------------
                                                                                   

consensus_14207#0      CAGATAAAGGATGTGCAACACCAACAAATAAAGGAAACCCGGTCACCTGTGATGCCTGTT 1320
consensus_14207#1      ------------------------------------------------------------
                                                                                   

consensus_14207#0      CAGGTGAAGGATGCACAAAACCAGCTTCTTAAGGGATCCCTTTCACCTGTGATCCCTGTT 1380
consensus_14207#1      ------------------------------------------------------------
                                                                                   

consensus_14207#0      CAGATAAAGGATGTACAATCCCAGCCACCGAAGGAAGCGCTGTCACCTGCGATCCCTGTT 1440
consensus_14207#1      ------------------------------------------------------------
                                                                                   

consensus_14207#0      CAGATTAAGGATGTACAACTCCAGCCTCGGAACGAACCAGTGTCAATCGGTAAGGGGGTG 1500
consensus_14207#1      ------------------------------------------------------------
                                                                                   

consensus_14207#0      GTTCCATTGCCAGCGATTAGGCCTCCGGTTAAGGTTGAGGCTCCAGCTGAAGTCAAGGAA 1560
consensus_14207#1      ------------GCGATTAGGCCTCCGGTTAAGGTTGAGGCTCCAGCTGAAGTCAAGGAA 48
                                   ************************************************

consensus_14207#0      GCTTCACAACCTGTTGCTGGTTCTTCTGTGGTGCAATGCAAGGCTGATACATCGCCGGAC 1620
consensus_14207#1      GCTTCACAACCTGTTGCTGGTTCTTCTGTGGTGCAATGCAAGGCTGATACATCGCCGGAC 108
                       ************************************************************

consensus_14207#0      TCTCTTCCGAAAACCCAGTTGAAGACCGCCAACGCCGACAACGCTGACGCCAAGGATGAT 1680
consensus_14207#1      TCTCTTCCGAAAACCCAGTTGAAGACCGCCAACGCCGACAACGCTGACGCCAAGGATGAT 168
                       ************************************************************

consensus_14207#0      CATCTCCCGGTGGATGCTGAAGAAGTGGAGGACATCATCAGGCATCTCGAGCTCAAATAA 1740
consensus_14207#1      CATCTCCCGGTGGATGCTGAAGAAGTGGAGGACATCATCAGGCATCTCGAGCTCAAATAA 228
                       ************************************************************

consensus_14207#0      TTTCAGAAAGCGTCAACGAACGAATGGGGCGTCATCTTCTGTCAGATTTTGTAATTAGCT 1800
consensus_14207#1      TTTCAGAAAGCGTCAACGAACGAATGGGGCGTCATCTTCTGTCAGATTTTGTAATTAGCT 288
                       ************************************************************

consensus_14207#0      GCCTCCTCCTATGCACATCCCTTTTCTGTTTTAGTTTTGTTTGCCTTTGGTTCGGATTAG 1860
consensus_14207#1      GCCTCCTCCTATGCACATCCCTTTTCTGTTTTAGTTTTGTTTGCCTTTGGTTCGGATTAG 348
                       ************************************************************

consensus_14207#0      GGGCGCTGGGCAAGCTGCATTTCTCGTAGGGGACACCTAGCTTTTTTTTTT-GTTCAGAA 1919
consensus_14207#1      GGGCGCTGGGCAAGCTGCATTTCTCGTAGGGGACACCTAGCTTTTTTTTTTTGTTCAGAA 408
                       *************************************************** ********

consensus_14207#0      GAGAGGGAAAAAAATGGACAAGACATACATGCAGTGGTAGGCGGTTTGCCCGTTGTTTGG 1979
consensus_14207#1      GAGAGGGAAAAAAATGGACAAGACATACATGCAGTGGTAGGCGGTTTGCCCGTTGTTTGG 468
                       ************************************************************

consensus_14207#0      AGATGGATGGTTGGTTATACTTCCCTGGATATGCAGTTGGTGGTCTGCTTTTACCCCCAA 2039
consensus_14207#1      AGATGGATGGTTGGTTATACTTCCCTGGAAAAAAAAAAAA-------------------- 508
                       ***************************** *   *                         

consensus_14207#0      TGATGAGGTGGATATTGTTGTTGCCTCTAGGGAAGGAAATTATGTGGCGGCAGTTTTACC 2099
consensus_14207#1      ------------------------------------------------------------
                                                                                   

consensus_14207#0      TCCTAAAATTTCTCCTAGTCATTCTCCTAATCCTCTTATTACTATTATACTCCTGCTTTG 2159
consensus_14207#1      ------------------------------------------------------------
                                                                                   

consensus_14207#0      CCATGCTGATGTTTAGAAGTTGGTGATAGTAGAGCTGTAGAGGTAACTATCTTTTCTCAC 2219
consensus_14207#1      ------------------------------------------------------------
                                                                                   

consensus_14207#0      TAATTT 2225
consensus_14207#1      ------