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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14211#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 2097 fasta sequence
[CACTCCCCTCTATCCACTGTTTCCGCCGCCGCCGCCGCCGCCGCCGCCGCCCGCCGCGCCGGCGTTCTCCCCCCGCCGACGAAGCACGGCGTGGAGTGTAGACGCAGCCTCCTCGCTCTCTCTCACGCCGGCGAGCAGGGTCTGGAGCCAGGAGCGACGCGGCGGCCGGGGCCGGGGCCTCCATCTCGGTTCGAACCGCACTGAAGGTCCCTCCCTGCATTAGGGCGCACAATGGCACTGACCCTTCTCAGAGGGATGCGAACGCCGGTTGTAGCTAGAAGGAATGCTGGCTTGTTCTTCACCACATTGCAGTCTCCGTTGTTGTCCCGCTTCACGATGAGAGCGGAGAGCGCGCGGGCCGCAGCGCCCAAGTCGATTCAGCTGGCGACCAAGGAGGCGGCGGAGCAGAAGGCGCAGGGCTTCGAGGCGGTCATCGGGATCGAGACCCATGTCCAGCTCTCGACGGTCACAAAGGCGTTCTGCTCGTGCCCGTACAGCTACGGGTCGCAGCCGAACAGCACCGTCTGCCCCACCTGCATGGGGCACCCCGGAACGCTGCCCGTTCTTAACGCAAAGGTTGTCGAATGCGCCGTGAGGTTGGGCCTCGCTCTCAATTGCGAGATCGCGATGACGTCCAAGTTTGATCGGAAGCAGTACTTCTACCCGGACCTGCCCAAGGGGTATCAGATTTCGCAGTTTGACATTCCCATTGCCAAGGAGGGTTACCTTGATTTGGATCTTCCGGTGGAGTTCGGCGGTGGGCATAGGAGATTTGGGGTCACAAGGGTGCATATGGAAGAAGATGCTGGCAAGCTGCTTCACTCTGAATCCGGGAGTTACTCTCAGGTTGACTTAAATAGGGCTGGCGTTCCTTTACTTGAAATTGTCTCAGAGCCAGATATGAGAACAGGGATAGAGGCTGCCGAGTATGGTGCTGAGCTACAGAGGCTTGTTAGGTACCTGGGCGTGAGTAATGGTAACATGCAGGAAGGTTCCCTTCGCTGTGATGTGAATGTTTCTGTTCGGCCAATTGGACAATCAAATTTTGGTACAAAGGTTGAAATAAAGAATATGAATTCATTTTCTGCAATAAGTAGGGCAATAGATTATGAGATCTCCCGGCAGATTCTTCTTCATAAAGAAGGTCAGGCTGATCAAATTGTACAAGAAACCCGGCTGTGGGATGAATCTTCTCAGAAAACTTTTACAATGCGAAAAAAGGAGGGACTTGCTGATTATAGATATTTTCCTGAGCCTGATCTTCCTGAAGTTGTTCTTACTAGTGAGTACATTGATGAAATTCAAAACTCAATGCCAGAGCTTCCTGAAGCAAAGCGTAGGCGCTTCGAGAATATGGGACTCAGCATGCAAGATGTTCTTTTCCTTGCTAATGACGATAATGTTGCTCGGTTCTTCGATTCTACCCTTGAGCACGGCGCGGATGCAAAGCTGGCTGCCAACTGGATCATGGGTGACATTGCTGCTTATTTGAAAAATGAAAAACTTTCCATTGATGAAATTAAATTAACACCTCTGGAGCTTTCTGAATTGATTGCATCTATAAGGAATGGAACTATCAGTGGGAAGATTGGAAAGGAGATTCTGATTGAACTCATTGCGAAAGGTGGAACTGTCAAGTCTGTGATAGAGGAGAAAGATTTGGTTCAGATAGCAGATCCTGCAGCAATTGAGGCAATGGTAGATCAAGTATTAGCTGATAATCCAAAGCAACTTGAGCAGTATCGGTCCGGGAAAACTAAATTGCAAGGATTTTTTGCTGGCCAGGTGATGAAAGCATCAAAGGGTAAAGCTAATCCTGTTTTGTTGAACAAAATCCTCGGGGAGAAATTGAAGGCCAATAGTTGAGGGGGTTTGTCGACAAACGGAGACTCATGTTGTAGTCCACGAGTGGACAATCGAACTAAACCCTGCAATTTGGGGTCTATTTTTCAATGATGAATTCTCTGTTAGCTCCAGTAGTTGTAAATGTTACTACTTTGTGGGTAGTTTATTTTTCTTCTTTTCTGAAAGAAAATTTTGTAAAAGCAGCATAATTTACATAATAAAAAG-ATGAATATTTATGCATCCAAAAAAAAA]
[+] EMBL AK064895 [CACTCCCCTCTATCCACTGTTTCCGCCGCCGCCGCCGCCGCCGCCGCCGCCCGCCGCGCCGGCGTTCTCCCCCCGCCGACGAAGCACGGCGTGGAGTGTAGACGCAGCCTCCTCGCTCTCTCTCACGCCGGCGAGCAGGGTCTGGAGCCAGGAGCGACGCGGCGGCCGGGGCCGGGGCCTCCATCTCGGTTCGAACCGCACTGAAGGTCCCTCCCTGCATTAGGGCGCACAATGGCACTGACCCTTCTCAGAGGGATGCGAACGCCGGTTGTAGCTAGAAGGAATGCTGGCTTGTTCTTCACCACATTGCAGTCTCCGTTGTTGTCCCGCTTCACGATGAGAGCGGAGAGCGCGCGGGCCGCAGCGCCCAAGTCGATTCAGCTGGCGACCAAGGAGGCGGCGGAGCAGAAGGCGCAGGGCTTCGAGGCGGTCATCGGGATCGAGACCCATGTCCAGCTCTCGACGGTCACAAAGGCGTTCTGCTCGTGCCCGTACAGCTACGGGTCGCAGCCGAACAGCACCGTCTGCCCCACCTGCATGGGGCACCCCGGAACGCTGCCCGTTCTTAACGCAAAGGTTGTCGAATGCGCCGTGAGGTTGGGCCTCGCTCTCAATTGCGAGATCGCGATGACGTCCAAGTTTGATCGGAAGCAGTACTTCTACCCGGACCTGCCCAAGGGGTATCAGATTTCGCAGTTTGACATTCCCATTGCCAAGGAGGGTTACCTTGATTTGGATCTTCCGGTGGAGTTCGGCGGTGGGCATAGGAGATTTGGGGTCACAAGGGTGCATATGGAAGAAGATGCTGGCAAGCTGCTTCACTCTGAATCCGGGAGTTACTCTCAGGTTGACTTAAATAGGGCTGGCGTTCCTTTACTTGAAATTGTCTCAGAGCCAGATATGAGAACAGGGATAGAGGCTGCCGAGTATGGTGCTGAGCTACAGAGGCTTGTTAGGTACCTGGGCGTGAGTAATGGTAACATGCAGGAAGGTTCCCTTCGCTGTGATGTGAATGTTTCTGTTCGGCCAATTGGACAATCAAATTTTGGTACAAAGGTTGAAATAAAGAATATGAATTCATTTTCTGCAATAAGTAGGGCAATAGATTATGAGATCTCCCGGCAGATTCTTCTTCATAAAGAAGGTCAGGCTGATCAAATTGTACAAGAAACCCGGCTGTGGGATGAATCTTCTCAGAAAACTTTTACAATGCGAAAAAAGGAGGGACTTGCTGATTATAGATATTTTCCTGAGCCTGATCTTCCTGAAGTTGTTCTTACTAGTGAGTACATTGATGAAATTCAAAACTCAATGCCAGAGCTTCCTGAAGCAAAGCGTAGGCGCTTCGAGAATATGGGACTCAGCATGCAAGATGTTCTTTTCCTTGCTAATGACGATAATGTTGCTCGGTTCTTCGATTCTACCCTTGAGCACGGCGCGGATGCAAAGCTGGCTGCCAACTGGATCATGGGTGACATTGCTGCTTATTTGAAAAATGAAAAACTTTCCATTGATGAAATTAAATTAACACCTCTGGAGCTTTCTGAATTGATTGCATCTATAAGGAATGGAACTATCAGTGGGAAGATTGGAAAGGAGATTCTGATTGAACTCATTGCGAAAGGTGGAACTGTCAAGTCTGTGATAGAGGAGAAAGATTTGGTTCAGATAGCAGATCCTGCAGCAATTGAGGCAATGGTAGATCAAGTATTAGCTGATAATCCAAAGCAACTTGAGCAGTATCGGTCCGGGAAAACTAAATTGCAAGGATTTTTTGCTGGCCAGGTGATGAAAGCATCAAAGGGTAAAGCTAATCCTGTTTTGTTGAACAAAATCCTCGGGGAGAAATTGAAGGCCAATAGTTGAGGGGGTTTGTCGACAAACGGAGACTCATGTTGTAGTCCACGAGTGGACAATCGAACTAAACCCTGCAATTTGGGGTCTA ]
[+] EMBL CB646236 [ ATCCACTGTTTCCGCCGCCGCCGCCGCCGCCGCCGCCGCCCGCCGCGCCGGCGTTCTCCCCCCGCCGACGAAGCACGGCGTGGAGTGTAGACGCAGCCTCCTCGCTCTCTCTCACGCCGGCGAGCAGGGTCTGGAGCCAGGAGCGACGCGGCGGCCGGGGCCGGGGCCTCCATCTCGGTTCGAACCGCACTGAAGGTCCCTCCCTGCATTAGGGCGCACAATGGCACTGACCCTTCTCAGAGGGATGCGAACGCCGGTTGTAGCTAGAAGGAATGCTGGCTTGTTCTTCACCACATTGCAGTCTCCGTTGTTGTCCCGCTTCACGATGAGAGCGGAGAGCGCGCGGGCCGCAGCGCCCAAGTCGATTCAGCTGGCGACCAAGGAGGCGGCGGAGCAGAAGGCGCAGGGCTTCGAGGCGGTCATCGGGATCGAGACCCATGTCCAGCTCTCGACGGTCACAAAGGCGTTCTGCTCGTGCCCGTACAGCTACGGGTCGCAGCCGAACAGCACCGTCTGCCCCACCTGCATGGGGCACCCCGGAACGCTGCCCGTTCTTAACGCAAAGGTTGTCGAATGCGCCGTGAGGTTGGGCCTCGCTCTCAATTGCGAGATCGCGATGACGTCCAAGTTTGATCGGAAGCAGTACTTCTACCCGGACCTGCCCAAGGGGTATCAGATTTCGCAGTTTGACATTCCCATTGCCAAGGAGGGTTACCTTGATTTGGATCTTCCGGTGGAGTTCGGCGGTGGGCATAGGAGATTTGGGGTCACAAGGG ]
[+] EMBL CB651038 [ CCGCCGCCGCCGCCGCCGCCGCCGCCGCCCGCCGCGCCGGCGTTCTCCCCCCGCCGACGAAGCACGGCGTGGAGTGTAGACGCAGCCTCCTCGCTCTCTCTCACGCCGGCGAGCAGGGTCTGGAGCCAGGAGCGACGCGGCGGCCGGGGCCGGGGCCTCCATCTCGGTTCGAACCGCACTGAAGGTCCCTCCCTGCATTAGGGCGCACAATGGCACTGACCCTTCTCAGAGGGATGCGAACGCCGGTTGTAGCTAGAAGGAATGCTGGCTTGTTCTTCACCACATTGCAGTCTCCGTTGTTGTCCCGCTTCACGATGAGAGCGGAGAGCGCGCGGGCCGCAGCGCCCAAGTCGATTCAGCTGGCGACCAAGGAGGCGGCGGAGCAGAAGGCGCAGGGCTTCGAGGCGGTCATCGGGATCGAGACCCATGTCCAGCTCTCGACGGTCACAAAGGCGTTCTGCTCGTGCCCGTACAGCTACGGGTCGCAGCCGAACAGCACCGTCTGCCCCACCTGCATGGGGCACCCCGGAACGCTGCCCGTTCTTAACGCAAAGGTTGTCGAATGCGCCGTGAGGTTGGGCCTCGCTCTCAATTGCGAGATCGCGATGACGTCCAAGTTTGATCGGAAGCAGTACTTCTACCCGGACCTGCCCAAGGGGTATCAGATTTCGCAGTTTGACATTCCCATTGCCAAGGAGGGTTACCTTGATTTGGATCTTCCGGTGGAGTTCGGCGGTGGGCATAAGAGATTTGGGGTCACTAGGGTGCATATGGAAGAAGATGCTGGCAAGCTGCTTCACTCTGAATCCGG ]
[+] EMBL CF324715 [ TCAGATTTCACAGTTTGACATTCCCATTGCCAAGGAGGGTTACCTTGATTTGGATCTTCCGGTGGAGTTCGGCGGTGGGCATAGGAGATTTGGGGTCACAAGGGTGCATATGGAAGAAGATGCTGGCAAGCTGCTTCACTCTGAATCCGGGAGTTACTCTCAGGTTGACTTAAATAGGGCTGGCGTTCCTTTACTTGAAATTGTCTCAGAGCCAGATATGAGAACAGGGATAGAGGCTGCCGAGTATGGTGCTGAACTACAGAGGCTTGTTAGGTACCTGGGCGTGAGTAACGGTAACATGCAGGAAGGTTCCCTTCGCTGTGATGTGAATGTTTCTGTTCGGCCAATTGGACAATCAAATTTTGGTACAAAGGTTGAAATAAAGAATATGAATTCATTTTCTGCAATAAGTAGGGCAATAGATTATGAGATCTCCCGGCAGATTCTTCTTCATAAAGAAGGTCAGGCTGATCAAATTGTACAAGAAACCCGCCTGTGGGATGAATCTTCTCAGAAAACTTTTACAATGCGAAAAAAGGAGGGACTTGCTGACTATAGATATTTTCC ]
[-] EMBL CB646139 [ TTCAAAACTCAATGCCAGAGCTTCCTGAAGCAAAGCGTAGGCGCTTCGAGAATATGGGACTCAGCATGCAAGATGTTCTTTTCCTTGCTAATGACGATAATGTTGCTCGGTTCTTCGATTCTACCCTTGAGCACGGCGCGGATGCAAAGCTGGCTGCCAACTGGATCATGGGTGACATTGCTGCTTATTTGAAAAATGAAAAACTTTCCATTGATGAAATTAAATTAACACCTCTGGAGCTTTCTGAATTGATTGCATCTATAAGGAATGGAACTATCAGTGGGAAGATTGGAAAGGAGATTCTGATTGAACTCATTGCGAAAGGTGGAACTGTCAAGTCTGTGATAGAGGAGAAAGATTTGGTTCAGATAGCAGATCCTGCAGCAATTGAGGCAATGGTAGATCAAGTATTAGCTGATAATCCAAAGCAACTTGAGCAGTATCGGTCCGGGAAAACTAAATTGCAAGGATTTTTTGCTGGCCAGGTGATGAAAGCATCAAAGGGTAAAGCTAATCCTGTTTTGTTGAACAAAATCCTCGGGGAGAAATTGAAGGCCAATAGTTGAGGGGGTTTGTCGACAAACGGAGACTCATGTTGTAGTCCACGAGTGGACAATCGAACTAAACCCTGCAATTTGGGGTCTATTTTTCAATGATGAATTCTCTGTTAGCTCCAGTAGTTGTAAATGTTACTACTTTGTGGGTAGTTTATTTTTCTTCTTTTCTGAAAGAAAATTTTGTAAAAGCAGCATAATTTACATAATAAAAAGTATGAATATTTATGCAT ]
[-] EMBL CB621544 [ CTCAATGCCAGAGCTTCCTGAAGCAAAGCGTAGGCGCTTCGAGAATATGGGACTCAGCATGCAAGATGTTCTTTTCCTTGCTAATGACGATAATGTTGCTCGGTTCTTCGATTCTACCCTTGAGCATGGCGCGGATGCAAAGCTGGCTGCCAACTGGATCATGGGTGACATTGCTGCTTATTTGAAAAATGAAAAACTTTCCATTGATGAAATTAAATTAACACCTCTGGAGCTTTCTGAATTGATTGCATCTATAAAGAATGGAACTATCAGTGGGAAGATTGGAAAGGAGATTCTGATTGAACTCATTGCGAAAGGTGGAACTGTCAAGTCTGTGATAGAGGAGAAAGATTTGGTTCAGATAGCAGATCCTGCAGCAATTGAGGCAATGGTAGATCAAGTATTAGCTGATAATCCAAAGCAACTTGAGCAGTATCGGTCCGGGAAAACTAAATTGCAAGGATTTTTTGCTGGCCAGGTGATGAAAGCATCAAAGGGTAAAGCTAATCCTGTTTTGTTGAACAAAATCCTCGGGGAGAAATTGAAGGCCAATAGTTGAGGGGGTTTGTCGACAAACGGAGACTCATGTTGTAGTCCACGAGTGGACAATCGAACTAAACCCTGCAATTTGGGGTCTATTTTTCAATGATGAATTCTCTGTTAGCTCCAGTAGTTGTAAATGATACTACTTTGTGGGTAGTTTATTTTTCTTCTTTTCTGAAAGAAAATTTTGTAAAAGCAGTATAATTTACATAATAAAAAG ATGAATATT ]
[-] EMBL CB651039 [ TGCCAGAGCTTCCTGAAGCAAAGCGTAGGCGCTTCGAGAATATGGGACTCAGCATGCAAGATGTTCTTTTCCTTGCTAATGACGATAATGTTGCTCGGTTCTTCGATTCTACCCTTGAGCACGGCGCGGATGCAAAGCTGGCTGCCAACTGGATCATGGGTGACATTGCTGCTTATTTGAAAAATGAAAAACTTTCCATTGATGAAATTAAATTAACACCTCTGGAGCTTTCTGAATTGATTGCATCTATAAGGAATGGAACTATCAGTGGGAAGATTGGAAAGGAGATTCTGATTGAACTCATTGCGAAAGGTGGAACTGTCAAGTCTGTGATAGAGGAGAAAGATTTGGTTCAGATAGCAGATCCTGCAGCAATTGAGGCAATGGTAGATCAAGTATTAGCTGATAATCCAAAGCAACTTGAGCAGTATCGGTCCGGGAAAACTAAATTGCAAGGATTTTTTGCTGGCCAGGTGATGAAAGCATCAAAGGGTAAAGCTAATCCTGTTTTGTTGAACAAAATCCTCGGGGAGAAATTGAAGGCCAATAGTTGAGGGGGTTTGTCGACAAACGGAGACTCATGTTGTAGTCCACGAGTGGACAATCGAACTAAACCCTGCAATTTGGGGTCTATTTTTCAATGATGAATTCTCTGTTAGCTCCAGTAGTTGTAAATGTTACTACTTTGTGGGTAGTTTATTTTTCTTCTTTTCTGAAAGAAAATTTTGTAAAAGCAGCATAATTTACATAATAAAAAG ATGAATATT ]
[+] EMBL OSC15991 [ attgTGAAAAGNAGATTCTNATTATNCTCATTGCGAAAGGTGGAACTGTCAAGTCTGTNATAGAGGAGAAAGATTTGGTTCAGATAGCAGATCCTGCAGCAATTGAGGCAATGGTAGATCAAGTATTANCTGATAATCCAAAGCAACTTGAGCAGTATCGGTCCGGGAAAACTAAATTNCAAGGATTTTTNNCTGGCCAGGTGATGAAAGCATCAAAGGGTAAAGCTAATCCTGTTTTGTTGAACAAAATCCTCGGGGNGAAATTGANGGCCAATAGTTGAGGGGGTTTGTCGGCAAACGGAGACTCATGTTGTAGTCCACGAGTGGNCAATCGAACTAAACCCng ]
[+] EMBL OS1172A [ gGGAAAGGAGATTCTGATTGAACTCATTGCGAAAGGTGGAACTGTCAAGTCTGTGATAGAGGAGAAAGATTTGGTTCAGATAGCAGATCCTGCAGCAATTGAGGCAATGGTAGATCAAGTATTAGCTGATAATCCAAAGCAACTTGAGCAGTATCGGTCCGGGAAAACTAAATTGCAAGGATTTTTTGCTGGCCAGGTGATGAAAGCATCAAAGGGTAAAGCTAATCCTGTTTTGTTGAACAAAATCCTCGGGGAGAAATTGAAGGCCAATAGTTGAGGGGGTTTGTCGACAAACGGAGACTCATGTTGTAGTCCACGAGTGGACAATCGAACTAAACCCTGCAATTTGGGGTCTA TTTTCAATGATGAATTCTCTGTTAGCTCCAGTAGTTGTAAATGTTACTTCTTTGTGGGGAGTTTA TGTTC TCTTTTCTG NAGANANTTTTGTAANAGCGGCTTNNTTT CCTATTNAAnggtg ]
[+] EMBL C98216 [ AGATTCTGATTGAACTCATTGCGAAAGGTGGAACTGTCAAGTCTGTGATAGAGGAGAAAGATTTGGTTCAGATAGCAGATCCTGCAGCAATTGAGGCAATGGTAGATCAAGTATTAGCTGATAATCCAAAGCAACTTGAGCAGTATCGGTCCGGGAAAACTAAATTGCAAGGATTTTTTGCTGGCCAGGTGATGAAAGCATCAAAGGGTAAAGCTAATCCTGTTTTGTTGAACAAAATCCTCGGGGAGAAATTGAAGGCCAATAGTTGAGGGGGTTTGTCGACAAACGGAGACTCATGTTGTAGTCCACGAGTGGACAATCGAACTAAACCCTGCAATTTGGGGTCTATTTTTCAATGATGAATTCTCTGTTAGCTCCAGTAGTTGTAAATGTTACTACTTTGTGGGTAGTTTATTTTTCTTCTTTTCTGAAAGAAAATTTTGTAAAAGCAGCATAATTTACATAATAAAAAG ATGAATATTTATGCATCCAAAAAAAAA]
[+] EMBL AU076170 [ TGAGCAGTATCGGTCCGGGAAAACTAAATTGCAAGGATTTTTTGCTGGCCAGGTGATGAAAGCATCAAAGGGTAAAGCTAATCCTGTTTTGTTGAACAAAATCCTCGGGGAGAAATTGAAGGCCAATAGTTGAGGGGGTTTGTCGACAAACGGAGACTCATGTTGTAGTCCACGAGTGGACAATCGAACTAAACCCTGCAATTTGGGGTCTATTTTTCAATGATGAATTCTCTGTTAGCTCCAGTAGTTGTAAATGTTACTACTTTGTGGGTAGTTTATTTTTCTTCTTTTCTGAAAGAAAATTTTGT AAAGCAGCATAATTTACATAAT AAAAG ATGAATATTTATGCA ]
[+] EMBL AU058178 [ TGAGCAGTATCGGTCCGGGAAAACTAAATTGCAAGGATTTTTTGCTGGCCAGGTGATGAAAGCATCAAAGGGTAAAGCTAATCCTGTTTTGTTGAACAAAATCCTCGGGGAGAAATTGAAGGCCAATAGTTGAGGGGGTTTGTCGACAAACGGAGACTCATGTTGTAGTCCACGAGTGGACAATCGAACTAAACCCTGCAATTTGGGGTCTATTTTTCAATGATGAATTCTCTGTTAGCTCCAGTAGTTGTAAATGTTACTACTTTGTGGGTAGTTTATTTTTCTTCTTTTCTG AAGAAAATTTTGT AAAGCAGCATAATTTACATAAT AAAAG ATGGATA TTATGCAnc ]
[+] EMBL C74718 [ TGAGCAGTATCGGTCCGGGAAAACTAAATTGCAAGGATTTTTTGCTGGCCAGGTGATGAAAGCATCAAAGGGTAAAGCTAATCCTGTTTTGTTGAACAAAATCCTCGGGGAGAAATTGAAGGCCAATAGTTGAGGGGGTTTGTCGACAAACGGAGACTCATGTTGTAGTCCACGAGTGGACAATCGAACTAAACCCTGCAATTTGGGGTCTATTTTTCAATGATGAATTCTCTGTTAGCTCCAGTAGTTGTAAATGTTACTACTTTGTGGGTAGTTTATTTTTCTTCTTTTCTGAA ]
consensusID : consensus_14211#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 774 fasta sequence
[TCTCCTATCCTTTTTCCCACTCCCCTCTATCCACTGTTTCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCCGCCGCCCGCCGCCCGCCGCTCCGGCGTTCTCCCCCCGCCGACGAAGCACGGCGTGGAGTGTAGACGCAGCCTCCTCGCTCTCTCTCACGCCGGCGAGCAGGGTCTGGAGCCAGGAGCGACGCGGCGGCCGGGGCCGGGGCCTCCATCTCGGTTCGAACCGCACTGAAGGTAAATCAGGTCCCTCCCTGCATTAGGGCGCACAATGGCTCTGACCCTTCTCAGAGGGATGCGAACACCGGTTGTAGCTAGAAGGAATGCTGGCTTGTTCTTCACCACATTGCAGACTCCGTTGTTGTCCCGCTTCACGACGAGAGCGGAGAGCGCGCGGGCCGCGGCGCACAAGTCGATTCAGCTGGCGACCAAGGAGGCGGCGGAGCAGAAAACGCAGAGCTTCGAGGCGGTCATTGGGATCGAGACCCATGTCCAGCTCTCGACGGTCACAAAGGCGTTCTGCTCGTGCCCGTACAGCTACGGGTCGCAGCCGAACAGCACCGTCTGCCCCACCTGCATGGGGCACCCCGGGACGCTGCCCGTTCTTAACGCGAAGGTTGTCGAATGCGCCGTGAAGTTGGGCCTCGCTCTCAATTGCGAGATCGCAACGACGTCCAAGTTTGATCGGAAGCAGTACTTCTACCCGGACCTGCCCAAGGGGTATCAGATTTCACAGTTTGACATTCCCATTGCCAAGGAGGGTTACCT]
[+] EMBL CB621543 [TCTCCTATCCTTTTTCCCACTCCCCTCTATCCACTGTTTCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCCGCCGCCCGCCGCCCGCCGCTCCGGCGTTCTCCCCCCGCCGACGAAGCACGGCGTGGAGTGTAGACGCAGCCTCCTCGCTCTCTCTCACGCCGGCGAGCAGGGTCTGGAGCCAGGAGCGACGCGGCGGCCGGGGCCGGGGCCTCCATCTCGGTTCGAACCGCACTGAAGGTAAATCAGGTCCCTCCCTGCATTAGGGCGCACAATGGCTCTGACCCTTCTCAGAGGGATGCGAACACCGGTTGTAGCTAGAAGGAATGCTGGCTTGTTCTTCACCACATTGCAGACTCCGTTGTTGTCCCGCTTCACGACGAGAGCGGAGAGCGCGCGGGCCGCGGCGCACAAGTCGATTCAGCTGGCGACCAAGGAGGCGGCGGAGCAGAAAACGCAGAGCTTCGAGGCGGTCATTGGGATCGAGACCCATGTCCAGCTCTCGACGGTCACAAAGGCGTTCTGCTCGTGCCCGTACAGCTACGGGTCGCAGCCGAACAGCACCGTCTGCCCCACCTGCATGGGGCACCCCGGGACGCTGCCCGTTCTTAACGCGAAGGTTGTCGAATGCGCCGTGAAGTTGGGCCTCGCTCTCAATTGCGAGATCGCAACGACGTCCAAGTTTGATCGGAAGCAGTACTTCTACCCGGACCTGCCCAAGGGGTATCAGATTTCACAGTTTGACATTCCCATTGCCAAGGAGGGTTACCT]
consensusID : consensus_14211#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 713 fasta sequence
[GCTGCCGAGTATGGTGCTGAGCTACAGAGGCTTGTTAGGTACCTGGGCGTGAGTAATGGTAACATGCAGGAAGGTTCCCTTCGCTGTGATGTGAATGTTTCTGTTCGGCCAATTGGACAATCAAATTTTGGTACAAAGGTTGAAATAAAGAATATGAATTCATTTTCTGCAATAAGTATGGCAATAGATTATGAGATCTCCCGGCAGATTCTTCTTCATAAAGAAGGTCAGGCTGATCAAATTGTACAAGAAACCCGGCTGTGGGATGAATCTTCTCAGAAAACTTTTACAATGCGAAAAAAGGAGATCAAGTATTAGCTGATAATCCAAAGCAACTTGAGCAGTATCGGTCCGGGAAAACTAAATTGCAAGGATTTTTTGCTGGCCAGGTGATGAAAGCATCAAAGGGTAAAGCTAATCCTGTTTTGTTGAACAAAATCCTCGGGGAGAAATTGAAGGCCAATAGTTGAGGGGGTTTGTCGACAAACGGAGACTCATGTTGTAGTCCACGAGTGGACAATCGAACTAACCCCTGCAATTTGGGGTCTATTTTTCAATGATGAATTCTCTGTTAGCTCCAGTAGTTGTAAATGTTACTACTTTGTGGGTAGTTTATTTTTCTTCTTTTCTGAAAGAAAATTTTGTAAAACGCAGCCATAAGTTTACAGTAATAAAAAGACTGAATATTTATGCATCCAAAAAAAAAAAAGGGA]
[-] EMBL CB648119 [GCTGCCGAGTATGGTGCTGAGCTACAGAGGCTTGTTAGGTACCTGGGCGTGAGTAATGGTAACATGCAGGAAGGTTCCCTTCGCTGTGATGTGAATGTTTCTGTTCGGCCAATTGGACAATCAAATTTTGGTACAAAGGTTGAAATAAAGAATATGAATTCATTTTCTGCAATAAGTATGGCAATAGATTATGAGATCTCCCGGCAGATTCTTCTTCATAAAGAAGGTCAGGCTGATCAAATTGTACAAGAAACCCGGCTGTGGGATGAATCTTCTCAGAAAACTTTTACAATGCGAAAAAAGGAGATCAAGTATTAGCTGATAATCCAAAGCAACTTGAGCAGTATCGGTCCGGGAAAACTAAATTGCAAGGATTTTTTGCTGGCCAGGTGATGAAAGCATCAAAGGGTAAAGCTAATCCTGTTTTGTTGAACAAAATCCTCGGGGAGAAATTGAAGGCCAATAGTTGAGGGGGTTTGTCGACAAACGGAGACTCATGTTGTAGTCCACGAGTGGACAATCGAACTAACCCCTGCAATTTGGGGTCTATTTTTCAATGATGAATTCTCTGTTAGCTCCAGTAGTTGTAAATGTTACTACTTTGTGGGTAGTTTATTTTTCTTCTTTTCTGAAAGAAAATTTTGTAAAACGCAGCCATAAGTTTACAGTAATAAAAAGACTGAATATTTATGCATCCAAAAAAAAAAAAGGGA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_14211#0 -----------------CACTCCCCTCTATCCACTGTTTCCGCCGCCGCCGCCGCCGCCG 43
consensus_14211#1 TCTCCTATCCTTTTTCCCACTCCCCTCTATCCACTGTTTCCGCCGCCGCCGCCGCCGCCG 60
consensus_14211#2 -----------------------------------------GCTGCCGAGTATGGTGCTG 19
** **** * ** *
consensus_14211#0 CCGCCGCC--------------------CGCCGCGCCGGCGTTCTCCCCCCGCCGACGAA 83
consensus_14211#1 CCGCCGCCGCCGCCCGCCGCCCGCCGCCCGCCGCTCCGGCGTTCTCCCCCCGCCGACGAA 120
consensus_14211#2 A-GCTACAGAGGCTTGTTA------GGTACCTGGGCGTGAGTAATGGTAACATGCAGGAA 72
** * * * * * ** * * * ***
consensus_14211#0 GCACGGCGTGGAGTGTAGACGCAGCCTCCTCGCTCTCTCTCACGCCGGCGAGCAGGGTCT 143
consensus_14211#1 GCACGGCGTGGAGTGTAGACGCAGCCTCCTCGCTCTCTCTCACGCCGGCGAGCAGGGTCT 180
consensus_14211#2 G-GTTCCCTTCGCTGT-GATGTGAATGTTTC-TGTTCGGCCAATTGGACAATCAAATTTT 129
* * * *** ** * ** ** ** * * * ** * *
consensus_14211#0 GGAGCCAGGAGCGACGCGGCGGCCGGGGCCGGGGCCTCCATCTCGGTTCGAACCGCACTG 203
consensus_14211#1 GGAGCCAGGAGCGACGCGGCGGCCGGGGCCGGGGCCTCCATCTCGGTTCGAACCGCACTG 240
consensus_14211#2 GGTACAAAGGTTGA------AATAAAGAATATGAATTCATTTTCTGCAATAAGTATGGCA 183
** * * * ** * * ** * ** * **
consensus_14211#0 AAGGT---------CCCTCCCTGCATTAGGGCGCACAATGGCACTGACCCTTCTCAGAGG 254
consensus_14211#1 AAGGTAAATCAGGTCCCTCCCTGCATTAGGGCGCACAATGGCTCTGACCCTTCTCAGAGG 300
consensus_14211#2 ATAGATTATGAGATCTCCCGGCAGATTCTTCTTCATAAAGAAGGTCAGGCTGATCAAATT 243
* * * * * *** ** ** * * * ** *** *
consensus_14211#0 G-ATGCGAACGCCGGTTGTAGCTAGAAGGAATGCTGG---CTTGTTCTTCACCACATTGC 310
consensus_14211#1 G-ATGCGAACACCGGTTGTAGCTAGAAGGAATGCTGG---CTTGTTCTTCACCACATTGC 356
consensus_14211#2 GTACAAGAAACCCGGCTGTGGGATGAATCTTCTCAGAAAACTTTTACAATGCGAAAAAAG 303
* * *** **** *** * *** * * *** * * * * *
consensus_14211#0 AGTCTCCGTTGTTGTCCCGCTTCACGATGAGAGCGGAGAGCGCGCGGGCCGCAGCGCCCA 370
consensus_14211#1 AGACTCCGTTGTTGTCCCGCTTCACGACGAGAGCGGAGAGCGCGCGGGCCGCGGCGCACA 416
consensus_14211#2 GAGATCAAGTATTAGCTGATAATCCAAAGCAACTTGAGCAGTATCGGTCCGGGAAAACTA 363
** * ** * * * * * *** *** *** *
consensus_14211#0 AGTCGATTCAGCTGGCGACCAAGGAGGCGGCGGA-GCAG-AAGGCGCAGGGCTTCGAGGC 428
consensus_14211#1 AGTCGATTCAGCTGGCGACCAAGGAGGCGGCGGA-GCAG-AAAACGCAGAGCTTCGAGGC 474
consensus_14211#2 AATTGCAAGGATTTTTTGCTGGCCAGGTGATGAAAGCATCAAAGGGTAAAGCT--AATCC 421
* * * * * *** * * * *** ** * * *** * *
consensus_14211#0 GGTCATCGGGATCGAGACCCATGTCCAGCTCTCGACGGTCACAAAGGCGTTCTGCTCGTG 488
consensus_14211#1 GGTCATTGGGATCGAGACCCATGTCCAGCTCTCGACGGTCACAAAGGCGTTCTGCTCGTG 534
consensus_14211#2 TGTTTTGTTGAACAAAATCCTCGGGGAGAAATTGAAGGCCAATAGTTGAGGGGGTTTGTC 481
** * ** * * * ** * ** * ** ** ** * * * **
consensus_14211#0 CCCGTACAGCTACGGGTCGCAGCCGAACAGCACCGTCTGCCCCACCTGCATGGGGCACCC 548
consensus_14211#1 CCCGTACAGCTACGGGTCGCAGCCGAACAGCACCGTCTGCCCCACCTGCATGGGGCACCC 594
consensus_14211#2 GACAAACGGAGACTCAT-GTTGTAGTCCACGAGTGGACAATCGAACTAACCCCTGCAATT 540
* ** * ** * * * * ** * * * * ** ***
consensus_14211#0 CGGAACGCTGCCCGTTCTTAACGCAAAGGTTGTCGAATGCGCCGTGAGGTTGGGCCTCGC 608
consensus_14211#1 CGGGACGCTGCCCGTTCTTAACGCGAAGGTTGTCGAATGCGCCGTGAAGTTGGGCCTCGC 654
consensus_14211#2 TGGG-----GTCTATTTTTCAATGATGAATTCTCTGTTAGCTCCAGTAGTTGTAAATGTT 595
** * * ** ** * ** ** * * * **** *
consensus_14211#0 TCTCAATTGCGAG-ATCGCGATGACGTCCAAGTTTGATCGGAAGCAGTACT---TCTACC 664
consensus_14211#1 TCTCAATTGCGAG-ATCGCAACGACGTCCAAGTTTGATCGGAAGCAGTACT---TCTACC 710
consensus_14211#2 ACTACTTTGTGGGTAGTTTATTTTTCTTCTTTTCTGAAAGAAAATTTTGTAAAACGCAGC 655
** *** * * * * * * *** * ** * * *
consensus_14211#0 CGGACCTGCCCAAGGGGTATCAGATTTCGCAGTTTGACATTCCCATTGCCAAGGAGGGTT 724
consensus_14211#1 CGGACCTGCCCAAGGGGTATCAGATTTCACAGTTTGACATTCCCATTGCCAAGGAGGGTT 770
consensus_14211#2 CATAAGTTTACAGTAATAAAAAGACTGAATATTTATGCATCCAAAAAAAAAAAAGGGA-- 713
* * * ** * *** * * ** *** * * ** **
consensus_14211#0 ACCTTGATTTGGATCTTCCGGTGGAGTTCGGCGGTGGGCATAGGAGATTTGGGGTCACAA 784
consensus_14211#1 ACCT-------------------------------------------------------- 774
consensus_14211#2 ------------------------------------------------------------
consensus_14211#0 GGGTGCATATGGAAGAAGATGCTGGCAAGCTGCTTCACTCTGAATCCGGGAGTTACTCTC 844
consensus_14211#1 ------------------------------------------------------------
consensus_14211#2 ------------------------------------------------------------
consensus_14211#0 AGGTTGACTTAAATAGGGCTGGCGTTCCTTTACTTGAAATTGTCTCAGAGCCAGATATGA 904
consensus_14211#1 ------------------------------------------------------------
consensus_14211#2 ------------------------------------------------------------
consensus_14211#0 GAACAGGGATAGAGGCTGCCGAGTATGGTGCTGAGCTACAGAGGCTTGTTAGGTACCTGG 964
consensus_14211#1 ------------------------------------------------------------
consensus_14211#2 ------------------------------------------------------------
consensus_14211#0 GCGTGAGTAATGGTAACATGCAGGAAGGTTCCCTTCGCTGTGATGTGAATGTTTCTGTTC 1024
consensus_14211#1 ------------------------------------------------------------
consensus_14211#2 ------------------------------------------------------------
consensus_14211#0 GGCCAATTGGACAATCAAATTTTGGTACAAAGGTTGAAATAAAGAATATGAATTCATTTT 1084
consensus_14211#1 ------------------------------------------------------------
consensus_14211#2 ------------------------------------------------------------
consensus_14211#0 CTGCAATAAGTAGGGCAATAGATTATGAGATCTCCCGGCAGATTCTTCTTCATAAAGAAG 1144
consensus_14211#1 ------------------------------------------------------------
consensus_14211#2 ------------------------------------------------------------
consensus_14211#0 GTCAGGCTGATCAAATTGTACAAGAAACCCGGCTGTGGGATGAATCTTCTCAGAAAACTT 1204
consensus_14211#1 ------------------------------------------------------------
consensus_14211#2 ------------------------------------------------------------
consensus_14211#0 TTACAATGCGAAAAAAGGAGGGACTTGCTGATTATAGATATTTTCCTGAGCCTGATCTTC 1264
consensus_14211#1 ------------------------------------------------------------
consensus_14211#2 ------------------------------------------------------------
consensus_14211#0 CTGAAGTTGTTCTTACTAGTGAGTACATTGATGAAATTCAAAACTCAATGCCAGAGCTTC 1324
consensus_14211#1 ------------------------------------------------------------
consensus_14211#2 ------------------------------------------------------------
consensus_14211#0 CTGAAGCAAAGCGTAGGCGCTTCGAGAATATGGGACTCAGCATGCAAGATGTTCTTTTCC 1384
consensus_14211#1 ------------------------------------------------------------
consensus_14211#2 ------------------------------------------------------------
consensus_14211#0 TTGCTAATGACGATAATGTTGCTCGGTTCTTCGATTCTACCCTTGAGCACGGCGCGGATG 1444
consensus_14211#1 ------------------------------------------------------------
consensus_14211#2 ------------------------------------------------------------
consensus_14211#0 CAAAGCTGGCTGCCAACTGGATCATGGGTGACATTGCTGCTTATTTGAAAAATGAAAAAC 1504
consensus_14211#1 ------------------------------------------------------------
consensus_14211#2 ------------------------------------------------------------
consensus_14211#0 TTTCCATTGATGAAATTAAATTAACACCTCTGGAGCTTTCTGAATTGATTGCATCTATAA 1564
consensus_14211#1 ------------------------------------------------------------
consensus_14211#2 ------------------------------------------------------------
consensus_14211#0 GGAATGGAACTATCAGTGGGAAGATTGGAAAGGAGATTCTGATTGAACTCATTGCGAAAG 1624
consensus_14211#1 ------------------------------------------------------------
consensus_14211#2 ------------------------------------------------------------
consensus_14211#0 GTGGAACTGTCAAGTCTGTGATAGAGGAGAAAGATTTGGTTCAGATAGCAGATCCTGCAG 1684
consensus_14211#1 ------------------------------------------------------------
consensus_14211#2 ------------------------------------------------------------
consensus_14211#0 CAATTGAGGCAATGGTAGATCAAGTATTAGCTGATAATCCAAAGCAACTTGAGCAGTATC 1744
consensus_14211#1 ------------------------------------------------------------
consensus_14211#2 ------------------------------------------------------------
consensus_14211#0 GGTCCGGGAAAACTAAATTGCAAGGATTTTTTGCTGGCCAGGTGATGAAAGCATCAAAGG 1804
consensus_14211#1 ------------------------------------------------------------
consensus_14211#2 ------------------------------------------------------------
consensus_14211#0 GTAAAGCTAATCCTGTTTTGTTGAACAAAATCCTCGGGGAGAAATTGAAGGCCAATAGTT 1864
consensus_14211#1 ------------------------------------------------------------
consensus_14211#2 ------------------------------------------------------------
consensus_14211#0 GAGGGGGTTTGTCGACAAACGGAGACTCATGTTGTAGTCCACGAGTGGACAATCGAACTA 1924
consensus_14211#1 ------------------------------------------------------------
consensus_14211#2 ------------------------------------------------------------
consensus_14211#0 AACCCTGCAATTTGGGGTCTATTTTTCAATGATGAATTCTCTGTTAGCTCCAGTAGTTGT 1984
consensus_14211#1 ------------------------------------------------------------
consensus_14211#2 ------------------------------------------------------------
consensus_14211#0 AAATGTTACTACTTTGTGGGTAGTTTATTTTTCTTCTTTTCTGAAAGAAAATTTTGTAAA 2044
consensus_14211#1 ------------------------------------------------------------
consensus_14211#2 ------------------------------------------------------------
consensus_14211#0 AGCAGCATAATTTACATAATAAAAAGATGAATATTTATGCATCCAAAAAAAAA 2097
consensus_14211#1 -----------------------------------------------------
consensus_14211#2 -----------------------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||